Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,369,637 |
T→C |
R345R (CGT→CGC) |
mopA → |
GroEL |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,369,637 | 0 | T | C | 100.0%
| 649.2
/ NA
| 205 | R345R (CGT→CGC) | mopA | GroEL |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (90/115); total (90/115) |
Only 100 of 221 total aligned reads displayed.
AGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGTGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGG > NC_000913/4369547‑4369726
|
aGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCgcgt < 1:3380767/93‑1 (MQ=255)
aGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCgcgt > 1:1258258/1‑93 (MQ=255)
aGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCgcgt < 1:2349904/93‑1 (MQ=255)
cTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCt > 1:1107252/1‑93 (MQ=255)
gggTCAGGCTAAACGTGTTGTGATCAACAAAGACACCTCCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCa > 1:2182685/1‑93 (MQ=255)
gggTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCa < 2:682093/93‑1 (MQ=255)
gggTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCa < 1:3737382/93‑1 (MQ=255)
gggTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCa < 2:3510377/93‑1 (MQ=255)
gggTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCa < 2:2143850/93‑1 (MQ=255)
gggTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGAGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCa > 1:3601421/1‑93 (MQ=255)
gTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGa < 2:4296342/93‑1 (MQ=255)
gTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGa < 2:2086422/93‑1 (MQ=255)
gTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGa < 2:1190753/93‑1 (MQ=255)
tCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGAt < 1:1148779/93‑1 (MQ=255)
tCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGAt < 1:2468974/93‑1 (MQ=255)
aGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATcc < 1:1191143/93‑1 (MQ=255)
gCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGt < 2:1143455/93‑1 (MQ=255)
cTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTc > 1:2442222/1‑93 (MQ=255)
aCGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTcagca < 1:2331223/93‑1 (MQ=255)
cGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTcagcag < 1:287679/93‑1 (MQ=255)
gtgtTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGa > 2:4616187/1‑93 (MQ=255)
tgttgtGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCNGCAGAt > 1:320027/1‑93 (MQ=255)
gttgtGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAtt < 1:820096/93‑1 (MQ=255)
gttgtGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAtt < 2:1997818/93‑1 (MQ=255)
gttgtGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAtt < 2:400354/93‑1 (MQ=255)
gttgtGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAtt > 2:901715/1‑93 (MQ=255)
tgtgATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTga > 2:3228364/1‑93 (MQ=255)
tgtgATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTga < 1:1699497/93‑1 (MQ=255)
gggATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTgaa < 2:830173/91‑1 (MQ=255)
aTCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTgaagaa < 1:1788995/93‑1 (MQ=255)
aTCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTgaagaa < 1:1857847/93‑1 (MQ=255)
aTCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTgaagaa > 2:578854/1‑93 (MQ=255)
caacaaAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGc < 2:1269538/93‑1 (MQ=255)
acaaAGACACCACCACTATCATCGATGGCGTGGTTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCaa < 1:4365134/93‑1 (MQ=255)
acaaAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCaa < 1:3905516/93‑1 (MQ=255)
aaGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACtt > 1:3530097/1‑93 (MQ=255)
aaGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACtt < 1:3791971/93‑1 (MQ=255)
atacacCCCCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTc < 2:2043199/91‑1 (MQ=255)
aGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTc < 2:798945/93‑1 (MQ=255)
cgccccaccacTGTCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCCCAGATCCGTCAGCAGATTGAAGAAGCAACTTCt < 2:198448/89‑1 (MQ=255)
acacCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAAGCCAGGGCCGCGTTGCTCAGATCCGTCANCAGATTGAAGAAGCGACTTNTg > 1:3308779/1‑93 (MQ=255)
caccaccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGa < 1:866688/93‑1 (MQ=255)
accaccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGAc > 2:3783545/1‑93 (MQ=255)
accaccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGAc < 1:1339662/93‑1 (MQ=255)
accaccacTATCATCGATGGCGTGGGGGAAGAAGATGGAATCCAGGCCCGCGTCGCTCAGATTCGCCACCAGATTGAAGAAGCAACTTCTGat > 2:2776573/1‑92 (MQ=255)
ccaccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACt > 2:3703595/1‑93 (MQ=255)
ccaccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACt > 2:1108954/1‑93 (MQ=255)
caccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTa < 2:2453146/93‑1 (MQ=255)
caccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTa > 2:1880707/1‑93 (MQ=255)
accacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGGTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTAc > 2:2327593/1‑93 (MQ=255)
accacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTAc < 1:4315455/93‑1 (MQ=255)
accacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTAc < 1:4582085/93‑1 (MQ=255)
ccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGAGTACg > 1:3658726/1‑93 (MQ=255)
cacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGa > 2:311480/1‑93 (MQ=255)
acTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGAc > 1:2227179/1‑93 (MQ=255)
atcatcGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGt < 1:2498419/93‑1 (MQ=255)
atcatcGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGt < 1:3830006/93‑1 (MQ=255)
tcatcGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTg > 2:2633379/1‑93 (MQ=255)
gtGGCGGGGGTGAAGGAGCGGCAATCCAGGGCCCGCTTTCCTAGGACCTTCAGCAGATTGAAGAAGCATCTTCTGACTACGACCGTGAAAAAc < 2:4168177/92‑1 (MQ=255)
aTGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAAc < 2:3377129/93‑1 (MQ=255)
aTGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAAc < 2:3473194/93‑1 (MQ=255)
ggCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTg < 2:2899729/93‑1 (MQ=255)
cGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCa < 1:687715/93‑1 (MQ=255)
gTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAg < 2:4677687/93‑1 (MQ=255)
tGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAgg > 1:1807167/1‑93 (MQ=255)
tGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAgg > 2:3848024/1‑93 (MQ=255)
tGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAgg > 1:1440323/1‑93 (MQ=255)
tGGGGGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAgg > 2:4337572/1‑93 (MQ=255)
gggTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGa > 1:4159320/1‑93 (MQ=255)
ggTGAATAAACTTCAATCCAGGGCCGCGTTGCTTAGAGCCTTCAGCAGATTGAAGAAACAACTTCTGACTACGACCGTGAAAAACTGCAGGaa < 1:2037502/93‑1 (MQ=255)
ggTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGaa < 1:1655110/93‑1 (MQ=255)
gTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAc < 1:3563930/93‑1 (MQ=255)
gTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAc < 2:4531158/93‑1 (MQ=255)
tGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAcg < 1:399939/93‑1 (MQ=255)
tGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAcg > 1:1481519/1‑93 (MQ=255)
gaagCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTa < 1:3078653/93‑1 (MQ=255)
gaagCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTa < 1:4533926/93‑1 (MQ=255)
gaagCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATGGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTa < 1:2683551/93‑1 (MQ=255)
gaagCTGCAATCCAGGGACGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTa > 1:4224202/1‑93 (MQ=255)
aagCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAg < 2:177405/93‑1 (MQ=255)
aagCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAg < 2:1286330/93‑1 (MQ=255)
agCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGc < 1:1717514/93‑1 (MQ=255)
agCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGc > 2:3580104/1‑93 (MQ=255)
gCAATCCAGGTCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCATCTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGaaa < 1:2411673/93‑1 (MQ=255)
cAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAAc < 2:617119/93‑1 (MQ=255)
cAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAAc < 2:3953337/93‑1 (MQ=255)
cAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAAc < 1:3813168/93‑1 (MQ=255)
aaTCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACt < 2:2996447/93‑1 (MQ=255)
aTCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTg > 2:1482584/1‑93 (MQ=255)
aTCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTg > 1:4623020/1‑93 (MQ=255)
aTCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTg > 2:1406503/1‑93 (MQ=255)
cAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCa < 1:583152/93‑1 (MQ=255)
cAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCa > 1:2734140/1‑93 (MQ=255)
aGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAg > 2:3164319/1‑93 (MQ=255)
gggCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCTTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAgg > 2:2476030/1‑93 (MQ=255)
gggCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAACCTGGCAgg > 2:3934036/1‑93 (MQ=255)
gggCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAgg > 1:189019/1‑93 (MQ=255)
gggCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAgg > 1:2382421/1‑93 (MQ=255)
ccGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAggcgg < 2:4449163/93‑1 (MQ=255)
ccGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAggcgg > 1:848379/1‑93 (MQ=255)
|
AGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGTGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGG > NC_000913/4369547‑4369726
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGAAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGTGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGCGTT > NC_000913/4369544‑4369730
|
GGAAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGG > SRR4302535.2931757/1‑94 (MQ=60)
GGAAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGC > SRR4302535.690758/1‑94 (MQ=60)
GGAAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGC > SRR4302535.4387716/1‑94 (MQ=60)
GGAAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGC < SRR4302535.4074892/94‑1 (MQ=60)
AAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGT > SRR4302535.4583360/1‑94 (MQ=60)
AAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGT > SRR4302535.1267259/1‑94 (MQ=60)
AGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTT < SRR4302535.2366751/94‑1 (MQ=60)
AGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTT < SRR4302535.2747346/94‑1 (MQ=60)
AGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTT < SRR4302535.3404270/94‑1 (MQ=60)
CCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCT > SRR4302535.1115161/1‑94 (MQ=60)
TGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCTCCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCA > SRR4302535.2198248/1‑94 (MQ=60)
TGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGAGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCA > SRR4302535.3626411/1‑94 (MQ=60)
GGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAG < SRR4302535.3763247/94‑1 (MQ=60)
GGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAG < SRR4302535.15940/94‑1 (MQ=60)
GGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAG < SRR4302535.1813952/94‑1 (MQ=60)
TCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATC < SRR4302535.2460235/94‑1 (MQ=60)
TCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATC < SRR4302535.2486772/94‑1 (MQ=60)
TCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATC < SRR4302535.1156960/94‑1 (MQ=60)
GCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATC < SRR4302535.4078459/94‑1 (MQ=60)
CAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCC < SRR4302535.3400532/94‑1 (MQ=60)
AGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCG < SRR4302535.4202740/94‑1 (MQ=60)
AGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCG > SRR4302535.1739556/1‑94 (MQ=60)
AGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCG < SRR4302535.1199671/94‑1 (MQ=60)
GCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTC > SRR4302535.2459816/1‑94 (MQ=60)
GCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTC > SRR4302535.3649778/1‑94 (MQ=60)
CTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCA > SRR4302535.2760047/1‑94 (MQ=60)
CTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCA < SRR4302535.1157378/94‑1 (MQ=60)
AAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGC > SRR4302535.3084371/1‑94 (MQ=60)
AAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGC > SRR4302535.3149185/1‑94 (MQ=60)
ACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAG < SRR4302535.2347896/94‑1 (MQ=60)
CGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGA < SRR4302535.289694/94‑1 (MQ=60)
CGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGA < SRR4302535.111594/94‑1 (MQ=60)
GTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCNGCAGAT > SRR4302535.322242/1‑94 (MQ=60)
GTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAT < SRR4302535.3282583/94‑1 (MQ=60)
GTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAT < SRR4302535.894676/94‑1 (MQ=60)
TGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATT > SRR4302535.3728554/1‑94 (MQ=60)
TGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATT > SRR4302535.699549/1‑94 (MQ=60)
GTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTG > SRR4302535.258416/1‑94 (MQ=60)
GTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTG < SRR4302535.825851/94‑1 (MQ=60)
TGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAA < SRR4302535.1711778/94‑1 (MQ=60)
GTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAG < SRR4302535.2385721/94‑1 (MQ=60)
ATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAG > SRR4302535.2411987/1‑94 (MQ=60)
ATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAG > SRR4302535.3828248/1‑94 (MQ=60)
ATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAG < SRR4302535.1871246/94‑1 (MQ=60)
ATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAG < SRR4302535.1801936/94‑1 (MQ=60)
CAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCA > SRR4302535.1875051/1‑94 (MQ=60)
CAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCA < SRR4302535.4696927/94‑1 (MQ=60)
AACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAA < SRR4302535.678716/94‑1 (MQ=60)
ACAAAGACACCACCACTATCATCGATGGCGTGGTTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAAC < SRR4302535.4395005/94‑1 (MQ=60)
ACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAAC < SRR4302535.3932267/94‑1 (MQ=60)
CAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACT < SRR4302535.385020/94‑1 (MQ=60)
AAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTT > SRR4302535.3554607/1‑94 (MQ=60)
AAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTC < SRR4302535.3818114/94‑1 (MQ=60)
AAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTC > SRR4302535.1733748/1‑94 (MQ=60)
GACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAAGCCAGGGCCGCGTTGCTCAGATCCGTCANCAGATTGAAGAAGCGACTTNTG > SRR4302535.3331802/1‑94 (MQ=60)
ACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGA < SRR4302535.3533775/94‑1 (MQ=60)
CACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGAC < SRR4302535.872817/94‑1 (MQ=60)
CACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGAC > SRR4302535.2607993/1‑94 (MQ=60)
CACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGAC < SRR4302535.1713414/94‑1 (MQ=60)
CACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCAGTCAGCAGATTGAAGAAGCAACTTCTGAC > SRR4302535.1366757/1‑94 (MQ=60)
ACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACT < SRR4302535.1349222/94‑1 (MQ=60)
ACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACT < SRR4302535.2424369/94‑1 (MQ=60)
CCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTA < SRR4302535.3898361/94‑1 (MQ=60)
CACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTAC < SRR4302535.442446/94‑1 (MQ=60)
ACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGAGTACG > SRR4302535.3684051/1‑94 (MQ=60)
ACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACG < SRR4302535.4613290/94‑1 (MQ=60)
ACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACG < SRR4302535.4344974/94‑1 (MQ=60)
CACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGAC > SRR4302535.2243025/1‑94 (MQ=60)
CACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGAC > SRR4302535.3578914/1‑94 (MQ=60)
ACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACC > SRR4302535.3868017/1‑94 (MQ=60)
ACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACC < SRR4302535.4633322/94‑1 (MQ=60)
ATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTG > SRR4302535.1698576/1‑94 (MQ=60)
ATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTG < SRR4302535.377504/94‑1 (MQ=60)
ATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTG < SRR4302535.2516443/94‑1 (MQ=60)
ATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTG < SRR4302535.3856422/94‑1 (MQ=60)
CATCGATGGCGTGGGTGACGAAGCTGCAATCCAGGGCCGCGTTGCCCAGATCCGCCAGCAGGTTGACGAAGCAACTTCTGAATACGACCGTGGA > SRR4302535.2731772/1‑94 (MQ=60)
CATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAA > SRR4302535.248654/1‑94 (MQ=60)
ATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAA > SRR4302535.147097/1‑94 (MQ=60)
GGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGC > SRR4302535.4256109/1‑94 (MQ=60)
CGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAG < SRR4302535.2188591/94‑1 (MQ=60)
CGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAG < SRR4302535.3635629/94‑1 (MQ=60)
CGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAG < SRR4302535.692534/94‑1 (MQ=60)
GTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGG > SRR4302535.1450624/1‑94 (MQ=60)
GTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGG > SRR4302535.2351073/1‑94 (MQ=60)
GTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGG > SRR4302535.1820222/1‑94 (MQ=60)
TGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGA > SRR4302535.4187786/1‑94 (MQ=60)
GGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAA < SRR4302535.3939333/94‑1 (MQ=60)
GGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAA > SRR4302535.132716/1‑94 (MQ=60)
GGTGAATAAACTTCAATCCAGGGCCGCGTTGCTTAGAGCCTTCAGCAGATTGAAGAAACAACTTCTGACTACGACCGTGAAAAACTGCAGGAAC < SRR4302535.2052175/94‑1 (MQ=60)
GGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAC < SRR4302535.491468/94‑1 (MQ=60)
GGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAC < SRR4302535.1667082/94‑1 (MQ=60)
GGNGNANANGCTGCAATCCAGGNCCGCGTTNCTCAGATCNGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAC < SRR4302535.973826/94‑1 (MQ=60)
GTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACG < SRR4302535.862328/94‑1 (MQ=60)
GTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACG > SRR4302535.1492114/1‑94 (MQ=60)
GTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACG < SRR4302535.3588641/94‑1 (MQ=60)
TGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGC < SRR4302535.402740/94‑1 (MQ=60)
AAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGATTACGACCGTGAAAAACTGCAGGAACGCGT > SRR4302535.4362647/1‑94 (MQ=60)
AGAAGCTGCAATCCAGGGACGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTA > SRR4302535.4253106/1‑94 (MQ=60)
GAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAG < SRR4302535.4564954/94‑1 (MQ=60)
GAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAG < SRR4302535.3100124/94‑1 (MQ=60)
GAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATGGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAG < SRR4302535.2702742/94‑1 (MQ=60)
AGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCG < SRR4302535.4290184/94‑1 (MQ=60)
AGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCG < SRR4302535.1729941/94‑1 (MQ=60)
TGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAA > SRR4302535.2441589/1‑94 (MQ=60)
TGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAA > SRR4302535.1369863/1‑94 (MQ=60)
GCAATCCAGGTCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCATCTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAAC < SRR4302535.2429033/94‑1 (MQ=60)
CAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACT < SRR4302535.3248283/94‑1 (MQ=60)
CAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACT < SRR4302535.2340126/94‑1 (MQ=60)
CAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACT > SRR4302535.1844766/1‑94 (MQ=60)
CAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACT < SRR4302535.3839483/94‑1 (MQ=60)
AATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTG > SRR4302535.4654420/1‑94 (MQ=60)
TCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGC > SRR4302535.83197/1‑94 (MQ=60)
TCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGC < SRR4302535.1230412/94‑1 (MQ=60)
CCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCA > SRR4302535.2753651/1‑94 (MQ=60)
CCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCA > SRR4302535.2229700/1‑94 (MQ=60)
CAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAG < SRR4302535.211426/94‑1 (MQ=60)
CAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAG < SRR4302535.587242/94‑1 (MQ=60)
AGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGG > SRR4302535.2399529/1‑94 (MQ=60)
AGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGG > SRR4302535.190325/1‑94 (MQ=60)
GCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGG < SRR4302535.3592146/94‑1 (MQ=60)
GCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGG > SRR4302535.854347/1‑94 (MQ=60)
CCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGG > SRR4302535.1633108/1‑94 (MQ=60)
CCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGC < SRR4302535.1921614/94‑1 (MQ=60)
CGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGCG < SRR4302535.611430/94‑1 (MQ=60)
CGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGCG > SRR4302535.585905/1‑94 (MQ=60)
CGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGCG > SRR4302535.3960461/1‑94 (MQ=60)
CGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGCGTT < SRR4302535.3745568/94‑1 (MQ=60)
CGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGCGTT > SRR4302535.3766175/1‑94 (MQ=60)
CGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGCGAT > SRR4302535.1173596/1‑94 (MQ=60)
|
GGAAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGTGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGCGTT > NC_000913/4369544‑4369730
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
