Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,369,637	T→C	R345R (CGT→CGC)	mopA →	GroEL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,369,637	0	T	C	99.5%	1207.3 / ‑5.8	385	R345R (CGT→CGC)	mopA	GroEL
Reads supporting (aligned to +/- strand): ref base T (2/0); new base C (185/198); total (187/198)
Fisher's exact test for biased strand distribution p-value = 2.35e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 407 total aligned reads displayed.

AGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGTGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGG  >  NC_000913/4369547‑4369726

aGACCTGGGTCAGTCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCgcgt                                                                                         <  2:1803335/93‑1 (MQ=255)

aGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCgcgt                                                                                         <  2:5021490/93‑1 (MQ=255)

aGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCgcgt                                                                                         <  1:3525756/93‑1 (MQ=255)

  aCCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTg                                                                                       >  1:5584341/1‑93 (MQ=255)

   ccTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGCGAAGAAGCTGCAATCCAGGGCCGCGTTGc                                                                                      >  1:4146621/1‑93 (MQ=255)

    cTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCt                                                                                     <  1:2004650/93‑1 (MQ=255)

    cTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCt                                                                                     >  1:7080834/1‑93 (MQ=255)

      gggTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCa                                                                                   <  1:3836317/93‑1 (MQ=255)

        gTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGa                                                                                 >  2:681347/1‑93 (MQ=255)

          cAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATc                                                                               <  2:1339856/93‑1 (MQ=255)

          cAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATc                                                                               <  1:6320362/93‑1 (MQ=255)

           aGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATcc                                                                              >  1:3024347/1‑93 (MQ=255)

            ggCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCg                                                                             <  1:7318114/93‑1 (MQ=255)

            ggCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGCGGGTCAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCg                                                                             >  1:1568126/1‑93 (MQ=255)

               tAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTca                                                                          <  2:38361/93‑1 (MQ=255)

                aaaCGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTcag                                                                         >  1:4988052/1‑93 (MQ=255)

                aaaCGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTcag                                                                         <  1:374443/93‑1 (MQ=255)

                 aaCGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTcagc                                                                        <  1:7554630/93‑1 (MQ=255)

                    gtgtTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGa                                                                     >  1:131417/1‑93 (MQ=255)

                    gtgtTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGa                                                                     <  1:430882/93‑1 (MQ=255)

                     tgttgtGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAt                                                                    <  1:964236/93‑1 (MQ=255)

                     tgttgtGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAt                                                                    >  2:87778/1‑93 (MQ=255)

                      gttgtGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGTGTTGCTCAGATCCGTCAGCAGAtt                                                                   >  2:6629913/1‑93 (MQ=255)

                      gttgtGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAtt                                                                   >  2:6182653/1‑93 (MQ=255)

                      gttgtGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAtt                                                                   >  1:3131590/1‑93 (MQ=255)

                       ttgtGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTg                                                                  <  2:1626553/93‑1 (MQ=255)

                        tgtgATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTga                                                                 <  2:5538853/93‑1 (MQ=255)

                         gtgATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTgaa                                                                <  2:5127696/93‑1 (MQ=255)

                          tgATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTgaag                                                               >  1:3697284/1‑93 (MQ=255)

                          tgATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTgaag                                                               >  2:4040603/1‑93 (MQ=255)

                                 caaAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAAc                                                        <  2:3698835/93‑1 (MQ=255)

                                 caaAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAAc                                                        >  2:2970955/1‑93 (MQ=255)

                                  aaaGAAACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACt                                                       >  2:5265714/1‑93 (MQ=255)

                                       caccaccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGa                                                  >  1:6683309/1‑93 (MQ=255)

                                        accaccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGAc                                                 >  2:692062/1‑93 (MQ=255)

                                        accaccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGAc                                                 <  2:199435/93‑1 (MQ=255)

                                        accaccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGAc                                                 <  2:1594883/93‑1 (MQ=255)

                                        accaccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGAc                                                 <  2:1203752/93‑1 (MQ=255)

                                         ccaccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGCAGCAACTTCTGACt                                                >  2:3542657/1‑93 (MQ=255)

                                         ccaccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACt                                                >  2:2257495/1‑93 (MQ=255)

                                          caccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTa                                               >  1:72373/1‑93 (MQ=255)

                                           cccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTAc                                              <  1:1027988/92‑1 (MQ=255)

                                           accacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTAc                                              >  1:5812261/1‑93 (MQ=255)

                                            ccacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACg                                             >  1:7467285/1‑93 (MQ=255)

                                             cacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGa                                            <  2:391445/93‑1 (MQ=255)

                                             cacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGa                                            <  1:1856358/93‑1 (MQ=255)

                                             cacTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGa                                            >  1:5173208/1‑93 (MQ=255)

                                              acTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGAc                                           <  2:786448/93‑1 (MQ=255)

                                              acTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGGTGCTCAGATCCGTAAGCAGATTGAAGAAGCCACATCTGACTTCGAc                                           >  2:2836787/1‑93 (MQ=255)

                                                tATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCg                                         >  1:4060467/1‑93 (MQ=255)

                                                tATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCg                                         <  1:2784658/93‑1 (MQ=255)

                                                tATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCg                                         >  2:743960/1‑93 (MQ=255)

                                                 atcatcGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGt                                        >  1:6421600/1‑93 (MQ=255)

                                                  tcatcGATGGCGTGTGCGACGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTg                                       >  2:6472215/1‑93 (MQ=255)

                                                     tcGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGaaa                                    >  2:2444940/1‑93 (MQ=255)

                                                     acGATGGCGTGGGTGAAAAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGaaa                                    <  1:5289107/92‑1 (MQ=255)

                                                       gATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGaaaaa                                  <  1:2343709/93‑1 (MQ=255)

                                                       gATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGaaaaa                                  >  2:1263857/1‑93 (MQ=255)

                                                       gATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGaaaaa                                  >  2:5602466/1‑93 (MQ=255)

                                                       gATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGaaaaa                                  <  2:1937751/93‑1 (MQ=255)

                                                       gATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGaaaaa                                  <  2:6519084/93‑1 (MQ=255)

                                                        aTGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAAc                                 <  2:7936698/93‑1 (MQ=255)

                                                         tGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACt                                <  1:2165816/93‑1 (MQ=255)

                                                         tGGCGGGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACt                                <  2:5756053/93‑1 (MQ=255)

                                                            cGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCa                             <  2:7315695/93‑1 (MQ=255)

                                                            cGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCa                             <  1:4451776/93‑1 (MQ=255)

                                                            cGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCa                             <  2:1423847/93‑1 (MQ=255)

                                                             gTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAg                            >  2:5413084/1‑93 (MQ=255)

                                                             gTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAg                            <  1:6124295/93‑1 (MQ=255)

                                                              tGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAgg                           >  2:258323/1‑93 (MQ=255)

                                                               ngnTGAANAAGCTGCAATCCANGNCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGa                          <  1:6524123/92‑1 (MQ=255)

                                                               gggTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGa                          <  1:2628718/93‑1 (MQ=255)

                                                               gggTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGa                          >  2:4751163/1‑93 (MQ=255)

                                                                ggTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGaa                         >  2:4519018/1‑93 (MQ=255)

                                                                  tGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAcg                       <  1:618568/93‑1 (MQ=255)

                                                                  tGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAcg                       >  1:1498344/1‑93 (MQ=255)

                                                                   gaagaaGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAcgc                      <  1:1122196/93‑1 (MQ=255)

                                                                   gaagaaGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAcgc                      >  2:6383169/1‑93 (MQ=255)

                                                                   gaagaaGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAcgc                      <  2:4251299/93‑1 (MQ=255)

                                                                   gaagaaGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAcgc                      >  2:2041764/1‑93 (MQ=255)

                                                                      gaagCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTa                   <  2:2701946/93‑1 (MQ=255)

                                                                      gaagCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTa                   <  1:4873493/93‑1 (MQ=255)

                                                                        agCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGc                 >  2:4626804/1‑93 (MQ=255)

                                                                         gCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCg                <  1:3379902/93‑1 (MQ=255)

                                                                          cTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGa               <  2:7602151/93‑1 (MQ=255)

                                                                           tGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGaa              <  2:4347759/93‑1 (MQ=255)

                                                                           tGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGaa              >  1:7772657/1‑93 (MQ=255)

                                                                            gCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGaaa             >  1:4813603/1‑93 (MQ=255)

                                                                            gCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGaaa             <  1:845345/93‑1 (MQ=255)

                                                                            gCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGaaa             <  2:3081496/93‑1 (MQ=255)

                                                                              aaTCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACt           <  1:673835/93‑1 (MQ=255)

                                                                              aaTCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACt           <  1:2933481/93‑1 (MQ=255)

                                                                              aaTCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACt           <  2:3446475/93‑1 (MQ=255)

                                                                                tCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTgg         >  2:4399479/1‑93 (MQ=255)

                                                                                 ccAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGc        <  2:7116120/93‑1 (MQ=255)

                                                                                  cAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCa       <  1:7697909/93‑1 (MQ=255)

                                                                                  cAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCa       >  1:248091/1‑93 (MQ=255)

                                                                                  cAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAACAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCa       >  1:6937765/1‑93 (MQ=255)

                                                                                   aGGGCCGCGTTGCTGAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGGAg      <  2:3263586/93‑1 (MQ=255)

                                                                                     ggCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAggc    <  2:7200091/93‑1 (MQ=255)

AGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGTGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGG  >  NC_000913/4369547‑4369726

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 202 total aligned reads displayed.

GGAAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGTGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGC  >  NC_000913/4369544‑4369727

GGAAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGC                                                                                            >  SRR4302543.4606249/1‑94 (MQ=60)

 GAAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCG                                                                                           <  SRR4302543.6802529/94‑1 (MQ=60)

 GAAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCG                                                                                           >  SRR4302543.5991745/1‑94 (MQ=60)

 GAAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCG                                                                                           <  SRR4302543.6990063/94‑1 (MQ=60)

 GAAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCG                                                                                           <  SRR4302543.2871874/94‑1 (MQ=60)

  AAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGT                                                                                          >  SRR4302543.4958722/1‑94 (MQ=60)

   AGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTT                                                                                         <  SRR4302543.3557187/94‑1 (MQ=60)

    GACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTG                                                                                        >  SRR4302543.5635202/1‑94 (MQ=60)

    GACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTG                                                                                        <  SRR4302543.6310078/94‑1 (MQ=60)

    GACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTG                                                                                        >  SRR4302543.1735985/1‑94 (MQ=60)

     ACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGC                                                                                       >  SRR4302543.2056473/1‑94 (MQ=60)

     ACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGCGAAGAAGCTGCAATCCAGGGCCGCGTTGC                                                                                       >  SRR4302543.4184099/1‑94 (MQ=60)

      CCTGTGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCT                                                                                      <  SRR4302543.2071770/94‑1 (MQ=60)

      CCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCT                                                                                      <  SRR4302543.2372993/94‑1 (MQ=60)

      CCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCT                                                                                      >  SRR4302543.7149597/1‑94 (MQ=60)

      CCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCT                                                                                      >  SRR4302543.7141657/1‑94 (MQ=60)

       CTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTC                                                                                     <  SRR4302543.2022660/94‑1 (MQ=60)

        TGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCA                                                                                    >  SRR4302543.7603559/1‑94 (MQ=60)

         GGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAG                                                                                   <  SRR4302543.7295808/94‑1 (MQ=60)

         GGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAG                                                                                   <  SRR4302543.3870175/94‑1 (MQ=60)

         GGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAG                                                                                   >  SRR4302543.6628848/1‑94 (MQ=60)

          GGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGTGTTGCTCAGA                                                                                  >  SRR4302543.965833/1‑94 (MQ=60)

          GGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGA                                                                                  <  SRR4302543.2880483/94‑1 (MQ=60)

           GTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGAT                                                                                 >  SRR4302543.2854229/1‑94 (MQ=60)

            TCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATC                                                                                >  SRR4302543.3777344/1‑94 (MQ=60)

            TCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATC                                                                                <  SRR4302543.2654912/94‑1 (MQ=60)

             CAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCC                                                                               <  SRR4302543.6379797/94‑1 (MQ=60)

             CAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCC                                                                               <  SRR4302543.2367642/94‑1 (MQ=60)

             CAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCC                                                                               <  SRR4302543.7159318/94‑1 (MQ=60)

             CAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCC                                                                               <  SRR4302543.5140385/94‑1 (MQ=60)

             CAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCC                                                                               <  SRR4302543.6751508/94‑1 (MQ=60)

             CAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCC                                                                               <  SRR4302543.7566640/94‑1 (MQ=60)

             CAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCC                                                                               >  SRR4302543.7641600/1‑94 (MQ=60)

             CAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCC                                                                               >  SRR4302543.3051680/1‑94 (MQ=60)

              AGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCG                                                                              <  SRR4302543.5820447/94‑1 (MQ=60)

              AGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCG                                                                              >  SRR4302543.5044082/1‑94 (MQ=60)

              AGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGCGGGTCAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCG                                                                              >  SRR4302543.1582130/1‑94 (MQ=60)

               GGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGT                                                                             <  SRR4302543.7388615/94‑1 (MQ=60)

               GGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTAAGATCCGT                                                                             >  SRR4302543.2059209/1‑94 (MQ=60)

                GCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTC                                                                            >  SRR4302543.4125540/1‑94 (MQ=60)

                 CTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCA                                                                           <  SRR4302543.348857/94‑1 (MQ=60)

                 CTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCA                                                                           <  SRR4302543.5329607/94‑1 (MQ=60)

                 CTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCA                                                                           <  SRR4302543.1767003/94‑1 (MQ=60)

                  TAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAG                                                                          <  SRR4302543.5304529/94‑1 (MQ=60)

                  TAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAG                                                                          >  SRR4302543.5033461/1‑94 (MQ=60)

                  TAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAG                                                                          <  SRR4302543.573782/94‑1 (MQ=60)

                   AAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGC                                                                         <  SRR4302543.377889/94‑1 (MQ=60)

                   AAACGAGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGCGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCACATCCGTCAGC                                                                         >  SRR4302543.5048840/1‑94 (MQ=60)

                    AACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCA                                                                        >  SRR4302543.6332414/1‑94 (MQ=60)

                    AACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCA                                                                        <  SRR4302543.7626570/94‑1 (MQ=60)

                    AACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCA                                                                        >  SRR4302543.5625502/1‑94 (MQ=60)

                     ACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAG                                                                       <  SRR4302543.2426601/94‑1 (MQ=60)

                      CGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGA                                                                      <  SRR4302543.2254252/94‑1 (MQ=60)

                      CGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGA                                                                      >  SRR4302543.132590/1‑94 (MQ=60)

                       GTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAT                                                                     >  SRR4302543.6860779/1‑94 (MQ=60)

                       GTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAT                                                                     <  SRR4302543.434919/94‑1 (MQ=60)

                       GTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGAT                                                                     <  SRR4302543.925813/94‑1 (MQ=60)

                        TGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATT                                                                    <  SRR4302543.972699/94‑1 (MQ=60)

                        TGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATT                                                                    >  SRR4302543.3159757/1‑94 (MQ=60)

                           TGTGATCAGCAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAA                                                                 >  SRR4302543.4334658/1‑94 (MQ=60)

                           TGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAA                                                                 <  SRR4302543.7464476/94‑1 (MQ=60)

                           TGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAA                                                                 >  SRR4302543.368368/1‑94 (MQ=60)

                            NTNATCANCNAAGACACCACNNNNATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAG                                                                <  SRR4302543.1472652/94‑1 (MQ=60)

                            GTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAG                                                                >  SRR4302543.3729790/1‑94 (MQ=60)

                             TGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGA                                                               <  SRR4302543.6217030/94‑1 (MQ=60)

                              GATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAA                                                              <  SRR4302543.4162594/94‑1 (MQ=60)

                              GATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAA                                                              <  SRR4302543.3144483/94‑1 (MQ=60)

                              GATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAA                                                              <  SRR4302543.7499207/94‑1 (MQ=60)

                              GATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAA                                                              >  SRR4302543.3624565/1‑94 (MQ=60)

                              GATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAA                                                              <  SRR4302543.7372407/94‑1 (MQ=60)

                              GATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAA                                                              <  SRR4302543.6234840/94‑1 (MQ=60)

                               ATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAG                                                             <  SRR4302543.1079344/94‑1 (MQ=60)

                               ATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAG                                                             >  SRR4302543.7830689/1‑94 (MQ=60)

                               ATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAG                                                             <  SRR4302543.109564/94‑1 (MQ=60)

                                TCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGC                                                            <  SRR4302543.6329/94‑1 (MQ=60)

                                TCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGC                                                            <  SRR4302543.1397825/94‑1 (MQ=60)

                                 CAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCA                                                           <  SRR4302543.6409051/94‑1 (MQ=60)

                                  AACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAA                                                          >  SRR4302543.1877760/1‑94 (MQ=60)

                                  AACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAA                                                          >  SRR4302543.6557032/1‑94 (MQ=60)

                                   ACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAAC                                                         <  SRR4302543.3746280/94‑1 (MQ=60)

                                   ACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAAC                                                         <  SRR4302543.4179785/94‑1 (MQ=60)

                                   ACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAAC                                                         <  SRR4302543.3890288/94‑1 (MQ=60)

                                   ACAAAGACACCACCACTATCATCGATGGCGTGGGGGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAAC                                                         >  SRR4302543.5984409/1‑94 (MQ=60)

                                    CAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACT                                                        <  SRR4302543.7722522/94‑1 (MQ=60)

                                    CAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACT                                                        <  SRR4302543.2875540/94‑1 (MQ=60)

                                    CAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACT                                                        <  SRR4302543.64689/94‑1 (MQ=60)

                                      AAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTC                                                      <  SRR4302543.1060468/94‑1 (MQ=60)

                                       AGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCT                                                     <  SRR4302543.6801781/94‑1 (MQ=60)

                                         ACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGA                                                   <  SRR4302543.755313/94‑1 (MQ=60)

                                         ACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGA                                                   >  SRR4302543.6746402/1‑94 (MQ=60)

                                         ACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGA                                                   <  SRR4302543.2544287/94‑1 (MQ=60)

                                          CACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGAC                                                  <  SRR4302543.913065/94‑1 (MQ=60)

                                          CACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGAC                                                  <  SRR4302543.4881578/94‑1 (MQ=60)

                                           ACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACT                                                 >  SRR4302543.4227445/1‑94 (MQ=60)

                                           ACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACT                                                 <  SRR4302543.343042/94‑1 (MQ=60)

                                            CCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTA                                                <  SRR4302543.4024911/94‑1 (MQ=60)

                                            CCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTA                                                >  SRR4302543.73034/1‑94 (MQ=60)

                                             CACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTAC                                               >  SRR4302543.2240744/1‑94 (MQ=60)

                                             CACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTAC                                               >  SRR4302543.5865116/1‑94 (MQ=60)

                                              CCCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACG                                              <  SRR4302543.1037096/94‑1 (MQ=60)

                                              ACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACG                                              >  SRR4302543.7538802/1‑94 (MQ=60)

                                               CCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGA                                             >  SRR4302543.5219925/1‑94 (MQ=60)

                                               CCACTATCATCGATGGCGTGGGGGAAGAAGCTGCAATCCAGGGGCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGA                                             >  SRR4302543.1171707/1‑94 (MQ=60)

                                                CACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGAC                                            <  SRR4302543.1873046/94‑1 (MQ=60)

                                                 CCTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACC                                           <  SRR4302543.6436178/94‑1 (MQ=60)

                                                  CTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGCCCG                                          >  SRR4302543.2767976/1‑94 (MQ=60)

                                                  CTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCG                                          >  SRR4302543.4096828/1‑94 (MQ=60)

                                                  CTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCG                                          >  SRR4302543.1519656/1‑94 (MQ=60)

                                                  CTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCG                                          >  SRR4302543.3741766/1‑94 (MQ=60)

                                                  CTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCG                                          <  SRR4302543.7903130/94‑1 (MQ=60)

                                                  CTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCG                                          <  SRR4302543.6932295/94‑1 (MQ=60)

                                                   TATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGT                                         >  SRR4302543.6482106/1‑94 (MQ=60)

                                                   TATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGT                                         <  SRR4302543.2810056/94‑1 (MQ=60)

                                                   TATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGT                                         >  SRR4302543.774783/1‑94 (MQ=60)

                                                    ATCATCGATGGCGTGGGTGAAGAAGGTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTG                                        >  SRR4302543.4239140/1‑94 (MQ=60)

                                                    ATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTG                                        <  SRR4302543.198447/94‑1 (MQ=60)

                                                    ATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTG                                        >  SRR4302543.1418963/1‑94 (MQ=60)

                                                    ATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTG                                        >  SRR4302543.3185924/1‑94 (MQ=60)

                                                    ATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTG                                        <  SRR4302543.5510581/94‑1 (MQ=60)

                                                    ATCAGCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTG                                        <  SRR4302543.3005461/94‑1 (MQ=60)

                                                    ACCATCGATGGCGTGGGTGAAGAAGGTGAAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGTAATTTCTGACTACGcctgcg                                        >  SRR4302543.6563364/1‑88 (MQ=60)

                                                      CATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAA                                      >  SRR4302543.4406493/1‑94 (MQ=60)

                                                       ATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAA                                     >  SRR4302543.2521273/1‑94 (MQ=60)

                                                       ATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAA                                     >  SRR4302543.7578537/1‑94 (MQ=60)

                                                        ACGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAA                                    <  SRR4302543.5336852/94‑1 (MQ=60)

                                                        ACGATGGCGTGGGTGAAAAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAA                                    <  SRR4302543.5336853/94‑1 (MQ=60)

                                                         CGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAA                                   >  SRR4302543.6767293/1‑94 (MQ=60)

                                                          GATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAAC                                  <  SRR4302543.3076404/94‑1 (MQ=60)

                                                          GATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAAC                                  <  SRR4302543.2364969/94‑1 (MQ=60)

                                                            TGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTG                                <  SRR4302543.2185221/94‑1 (MQ=60)

                                                               CGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAG                             >  SRR4302543.1256972/1‑94 (MQ=60)

                                                               CGTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAG                             <  SRR4302543.4492089/94‑1 (MQ=60)

                                                                GTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCCGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGG                            >  SRR4302543.5965216/1‑94 (MQ=60)

                                                                GTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGG                            <  SRR4302543.6182294/94‑1 (MQ=60)

                                                                GTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGG                            <  SRR4302543.6182295/94‑1 (MQ=60)

                                                                GTGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGG                            >  SRR4302543.7828673/1‑94 (MQ=60)

                                                                 TGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGA                           >  SRR4302543.6604120/1‑94 (MQ=60)

                                                                 TGGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGA                           <  SRR4302543.2757931/94‑1 (MQ=60)

                                                                  TGGTGAAGAAGATGCAATCCAGGGCCGCGGTGCTGAGATCCGTCAGCAGATTGAATAAGCAACTGCGGACGACGACCGTGAAAAACTGCAGGAA                          <  SRR4302543.4892572/94‑1 (MQ=60)

                                                                  NGNTGAANAAGCTGCAATCCANGNCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAA                          <  SRR4302543.6585557/94‑1 (MQ=60)

                                                                  GGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAA                          <  SRR4302543.2652504/94‑1 (MQ=60)

                                                                  GGGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAA                          <  SRR4302543.4892571/94‑1 (MQ=60)

                                                                   GGTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAAC                         >  SRR4302543.3339026/1‑94 (MQ=60)

                                                                    NTNAAGANACTGCAATCCAGNNNNGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACG                        <  SRR4302543.2408435/94‑1 (MQ=60)

                                                                    GTGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACG                        >  SRR4302543.1511823/1‑94 (MQ=60)

                                                                     TGAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGC                       <  SRR4302543.624228/94‑1 (MQ=60)

                                                                      GAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCG                      <  SRR4302543.153229/94‑1 (MQ=60)

                                                                      GAAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCG                      <  SRR4302543.1132378/94‑1 (MQ=60)

                                                                       AAGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGT                     >  SRR4302543.3489766/1‑94 (MQ=60)

                                                                        AGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTA                    <  SRR4302543.4356979/94‑1 (MQ=60)

                                                                        AGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTA                    >  SRR4302543.6935555/1‑94 (MQ=60)

                                                                        AGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTA                    >  SRR4302543.3932400/1‑94 (MQ=60)

                                                                        AGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTA                    >  SRR4302543.7272702/1‑94 (MQ=60)

                                                                        AGAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTA                    >  SRR4302543.6028129/1‑94 (MQ=60)

                                                                         GAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAG                   <  SRR4302543.7512775/94‑1 (MQ=60)

                                                                         GAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAG                   <  SRR4302543.4917916/94‑1 (MQ=60)

                                                                         GAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAG                   <  SRR4302543.1394225/94‑1 (MQ=60)

                                                                         GAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAG                   <  SRR4302543.5456531/94‑1 (MQ=60)

                                                                         GAAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAG                   <  SRR4302543.782781/94‑1 (MQ=60)

                                                                          AAGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGC                  <  SRR4302543.5445436/94‑1 (MQ=60)

                                                                           AGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCG                 <  SRR4302543.2221108/94‑1 (MQ=60)

                                                                           AGCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCG                 >  SRR4302543.4431068/1‑94 (MQ=60)

                                                                            GCTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGA                <  SRR4302543.3410228/94‑1 (MQ=60)

                                                                             CTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGATCGTGAAAAACTGCAGGAACGCGTAGCGAA               >  SRR4302543.2530640/1‑94 (MQ=60)

                                                                             CTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAA               >  SRR4302543.7845974/1‑94 (MQ=60)

                                                                             CTGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAA               >  SRR4302543.4613514/1‑94 (MQ=60)

                                                                              TGCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAA              >  SRR4302543.4857558/1‑94 (MQ=60)

                                                                               GCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAAC             <  SRR4302543.852841/94‑1 (MQ=60)

                                                                               GCAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAAC             <  SRR4302543.319869/94‑1 (MQ=60)

                                                                                CAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACT            <  SRR4302543.808208/94‑1 (MQ=60)

                                                                                CAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACT            <  SRR4302543.7387693/94‑1 (MQ=60)

                                                                                CAATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACT            <  SRR4302543.3174830/94‑1 (MQ=60)

                                                                                 AATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTG           <  SRR4302543.680034/94‑1 (MQ=60)

                                                                                 AATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTG           >  SRR4302543.7378168/1‑94 (MQ=60)

                                                                                 AATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTG           <  SRR4302543.1810734/94‑1 (MQ=60)

                                                                                 AATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTG           <  SRR4302543.2960116/94‑1 (MQ=60)

                                                                                 AATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTG           >  SRR4302543.6525514/1‑94 (MQ=60)

                                                                                  ATCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGG          <  SRR4302543.1998147/94‑1 (MQ=60)

                                                                                   TCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGC         <  SRR4302543.2984371/94‑1 (MQ=60)

                                                                                   TCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGC         >  SRR4302543.3047491/1‑94 (MQ=60)

                                                                                   TCCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGC         <  SRR4302543.5751/94‑1 (MQ=60)

                                                                                    CCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAACACTGCAGGAACGCGTAGCGAAACTGGCA        >  SRR4302543.1169294/1‑94 (MQ=60)

                                                                                    CCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCA        >  SRR4302543.386888/1‑94 (MQ=60)

                                                                                    CCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCA        >  SRR4302543.3793764/1‑94 (MQ=60)

                                                                                    CCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCA        >  SRR4302543.7003028/1‑94 (MQ=60)

                                                                                    CCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCA        <  SRR4302543.7966831/94‑1 (MQ=60)

                                                                                    CCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCA        >  SRR4302543.3793765/1‑94 (MQ=60)

                                                                                    CCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCA        <  SRR4302543.7065786/94‑1 (MQ=60)

                                                                                    CCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCA        >  SRR4302543.4537364/1‑94 (MQ=60)

                                                                                    CCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCA        >  SRR4302543.250250/1‑94 (MQ=60)

                                                                                    CCAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAACAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCA        >  SRR4302543.7003027/1‑94 (MQ=60)

                                                                                     CAGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAG       <  SRR4302543.7770773/94‑1 (MQ=60)

                                                                                      AGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGG      <  SRR4302543.356722/94‑1 (MQ=60)

                                                                                      AGGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGG      >  SRR4302543.3093565/1‑94 (MQ=60)

                                                                                       GGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGG     >  SRR4302543.4960196/1‑94 (MQ=60)

                                                                                       GGGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGG     >  SRR4302543.4960195/1‑94 (MQ=60)

                                                                                        GGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCG    >  SRR4302543.1571425/1‑94 (MQ=60)

                                                                                        GGCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCG    <  SRR4302543.6562900/94‑1 (MQ=60)

                                                                                         GCCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGG   <  SRR4302543.6624282/94‑1 (MQ=60)

                                                                                          CCGCGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGG  >  SRR4302543.5599106/1‑94 (MQ=60)

GGAAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGTGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGC  >  NC_000913/4369544‑4369727

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`