Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,428,292 |
T→C |
V284A (GTT→GCT) |
cycA → |
transport of D‑alanine, D‑serine, and glycine |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,428,292 | 0 | T | C | 100.0%
| 672.6
/ NA
| 208 | V284A (GTT→GCT) | cycA | transport of D‑alanine, D‑serine, and glycine |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (111/97); total (111/97) |
Only 100 of 215 total aligned reads displayed.
TCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAGCG > NC_000913/4428202‑4428381
|
tCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTttgctg > 1:4649560/1‑93 (MQ=255)
tCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTttgctg > 2:2711733/1‑93 (MQ=255)
ccGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGa < 1:1264607/93‑1 (MQ=255)
cGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGaa > 1:4114922/1‑93 (MQ=255)
gTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAAc > 1:2190449/1‑93 (MQ=255)
tATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACt < 1:4381980/93‑1 (MQ=255)
tATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACt > 2:4663855/1‑93 (MQ=255)
tATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACt < 2:1822418/93‑1 (MQ=255)
aTCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTg > 2:2176458/1‑93 (MQ=255)
aTCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTg > 2:2698819/1‑93 (MQ=255)
tCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGt < 1:3276346/93‑1 (MQ=255)
tCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGt > 1:1339766/1‑93 (MQ=255)
tCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGt > 1:344627/1‑93 (MQ=255)
tCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGt > 2:4345725/1‑93 (MQ=255)
cATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGtt < 2:1765887/93‑1 (MQ=255)
tATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCgt > 2:1248798/1‑93 (MQ=255)
tATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCgt > 2:2556552/1‑93 (MQ=255)
gTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGtt < 2:3490378/93‑1 (MQ=255)
gTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGtt < 1:3996386/93‑1 (MQ=255)
ttCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTg < 1:3864156/93‑1 (MQ=255)
aCGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAg > 1:210180/1‑93 (MQ=255)
aCGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAg < 2:608734/93‑1 (MQ=255)
cGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAgg > 1:1888468/1‑93 (MQ=255)
gTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAggg > 2:3573926/1‑93 (MQ=255)
gTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAggg > 1:3378024/1‑93 (MQ=255)
gTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAggg > 2:2516979/1‑93 (MQ=255)
cTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGct > 1:1404399/1‑93 (MQ=255)
tCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGctgc > 1:519354/1‑93 (MQ=255)
gcgcTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGctgcct < 2:2078735/93‑1 (MQ=255)
cgcTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGAGctgcctg < 2:4557079/93‑1 (MQ=255)
gcTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGctgcctgc > 1:2573355/1‑93 (MQ=255)
gcTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGctgcctgc > 2:4151459/1‑93 (MQ=255)
gcTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGCTTGCTGAACTGTTCGTGTTGGTAGGGctggctgc > 1:4195294/1‑93 (MQ=255)
cTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCctgct < 2:837496/93‑1 (MQ=255)
tGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCctgctg > 2:1871374/1‑93 (MQ=255)
tGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCctgctg > 2:814513/1‑93 (MQ=255)
ggATTGTGATTATGTCCGTGACGCCGGGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCctgctg < 2:553768/92‑1 (MQ=255)
gATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCtgctgc > 1:309761/1‑93 (MQ=255)
aTTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGcc > 1:3646686/1‑93 (MQ=255)
aTTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGcc > 1:707352/1‑93 (MQ=255)
ttGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCg > 2:2149423/1‑93 (MQ=255)
ttGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCg > 1:2736346/1‑93 (MQ=255)
ttGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCg > 1:748563/1‑93 (MQ=255)
tgATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCaa < 1:1419995/93‑1 (MQ=255)
tgATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCaa < 2:1043424/93‑1 (MQ=255)
gATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAg > 1:10353/1‑93 (MQ=255)
gATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAg < 1:4492227/93‑1 (MQ=255)
aTTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGc < 2:4006219/93‑1 (MQ=255)
ttATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCg < 1:2197883/93‑1 (MQ=255)
ttATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCg > 1:3783613/1‑93 (MQ=255)
tATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGt < 1:2961760/93‑1 (MQ=255)
aTGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTg < 1:838279/93‑1 (MQ=255)
aTGCCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTg < 2:3553904/93‑1 (MQ=255)
gTCCGTGACGCCGTGGAGTTCGGTAGTCCAGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGAt < 2:1674639/93‑1 (MQ=255)
tCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATc > 1:1184735/1‑93 (MQ=255)
ccGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCa > 1:2713068/1‑93 (MQ=255)
ccGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAAATGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCa < 1:2510485/93‑1 (MQ=255)
cGTGCCGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCGGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCaa < 2:2321285/93‑1 (MQ=255)
cGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCaa > 1:840658/1‑93 (MQ=255)
cGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCaa < 1:306830/93‑1 (MQ=255)
tGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACt < 2:633610/93‑1 (MQ=255)
aCGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACttt > 2:1173666/1‑93 (MQ=255)
aCGCCGTGGAGTGCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACttt < 2:753378/93‑1 (MQ=255)
cGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTtg < 2:1907784/93‑1 (MQ=255)
gCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTtgt > 2:3974880/1‑93 (MQ=255)
ccGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTtgtg < 1:3360782/93‑1 (MQ=255)
ccGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTtgtg < 1:1774140/93‑1 (MQ=255)
ccGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTtgtg > 2:3271494/1‑93 (MQ=255)
gTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTgtggt > 2:3068976/1‑93 (MQ=255)
gTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTgtggt < 2:2767918/93‑1 (MQ=255)
ggAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGc < 1:3611831/93‑1 (MQ=255)
ggAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGc > 2:359481/1‑93 (MQ=255)
gAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCt > 2:460438/1‑93 (MQ=255)
aGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTg < 1:3584245/93‑1 (MQ=255)
gTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGa < 1:3509114/93‑1 (MQ=255)
gTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGa > 2:3862667/1‑93 (MQ=255)
tCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGAcc > 2:2893221/1‑93 (MQ=255)
tCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGAcc < 2:221720/93‑1 (MQ=255)
gTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTgcg > 1:2021629/1‑93 (MQ=255)
ggAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTc < 1:4236127/93‑1 (MQ=255)
gagaAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCt < 1:2453100/93‑1 (MQ=255)
gagaAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACGTTGTGGTGCTGACCTCTGCGGCGTCt > 1:1015211/1‑93 (MQ=255)
ggaaaGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTc > 2:4616015/3‑93 (MQ=255)
gaAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTc > 2:394662/1‑93 (MQ=255)
aaaaGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTcc < 2:2978127/93‑1 (MQ=255)
aaaGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCg > 1:931504/1‑93 (MQ=255)
aGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCt > 1:2639530/1‑93 (MQ=255)
aGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCt > 2:65985/1‑93 (MQ=255)
aGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGATGCTGACCTCTGCGGCGTCTTCCGCt > 2:3795167/1‑93 (MQ=255)
gCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTa < 1:645125/93‑1 (MQ=255)
cccGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTaa < 2:1621485/93‑1 (MQ=255)
cGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACa > 1:2880886/1‑93 (MQ=255)
cGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACa < 1:2319861/93‑1 (MQ=255)
cGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACa > 1:9177/1‑93 (MQ=255)
gTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTTACAg > 2:4428461/1‑93 (MQ=255)
gTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAg > 2:3349493/1‑93 (MQ=255)
tttGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAgc < 1:148720/93‑1 (MQ=255)
tttGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAgc > 2:4192153/1‑93 (MQ=255)
tttGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAgc < 1:3035808/93‑1 (MQ=255)
ttgctgAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAgcg < 2:28471/93‑1 (MQ=255)
|
TCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAGCG > NC_000913/4428202‑4428381
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAGCGGCGT > NC_000913/4428199‑4428385
|
CGATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGC > SRR4302535.778376/1‑94 (MQ=60)
CGATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGC > SRR4302535.2704350/1‑94 (MQ=60)
GATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCT > SRR4302535.66327/1‑94 (MQ=60)
ATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTG > SRR4302535.4681050/1‑94 (MQ=60)
ATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTG > SRR4302535.1427250/1‑94 (MQ=60)
ATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTG < SRR4302535.2749589/94‑1 (MQ=60)
CCGTATCATTATGTTCTACGTCTTCGCTCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAA < SRR4302535.3705432/94‑1 (MQ=60)
CCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAA > SRR4302535.4143089/1‑94 (MQ=60)
CCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAA > SRR4302535.782866/1‑94 (MQ=60)
CCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAA < SRR4302535.1273655/94‑1 (MQ=60)
CGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAAC > SRR4302535.2206042/1‑94 (MQ=60)
GTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACT > SRR4302535.573981/1‑94 (MQ=60)
TATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTG < SRR4302535.4411958/94‑1 (MQ=60)
TATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGCCCCGCAGAAAAGCCCGTTTGCTGAACTG > SRR4302535.1453849/1‑94 (MQ=60)
ATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGT > SRR4302535.1349326/1‑94 (MQ=60)
ATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGT > SRR4302535.347004/1‑94 (MQ=60)
TCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTT > SRR4302535.3086084/1‑94 (MQ=60)
TCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTT < SRR4302535.3299106/94‑1 (MQ=60)
CATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTC < SRR4302535.925727/94‑1 (MQ=60)
TTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGT < SRR4302535.1929808/94‑1 (MQ=60)
TTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGT < SRR4302535.220915/94‑1 (MQ=60)
TATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTG > SRR4302535.3487240/1‑94 (MQ=60)
GTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTG < SRR4302535.4023729/94‑1 (MQ=60)
GTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTG < SRR4302535.844793/94‑1 (MQ=60)
GTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTG < SRR4302535.3696071/94‑1 (MQ=60)
TTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGG < SRR4302535.3890739/94‑1 (MQ=60)
CTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTA > SRR4302535.2115294/1‑94 (MQ=60)
TACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAG > SRR4302535.211624/1‑94 (MQ=60)
TACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAG < SRR4302535.4413579/94‑1 (MQ=60)
ACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGG > SRR4302535.1902070/1‑94 (MQ=60)
ACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGG < SRR4302535.2711187/94‑1 (MQ=60)
ACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGG < SRR4302535.2629642/94‑1 (MQ=60)
CGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGG > SRR4302535.3401511/1‑94 (MQ=60)
TCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCT > SRR4302535.1414416/1‑94 (MQ=60)
TTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGC > SRR4302535.522988/1‑94 (MQ=60)
TCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCC > SRR4302535.3336187/1‑94 (MQ=60)
TCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCC < SRR4302535.1035968/94‑1 (MQ=60)
CGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCT > SRR4302535.4136958/1‑94 (MQ=60)
CGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGC > SRR4302535.2591851/1‑94 (MQ=60)
CGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGC > SRR4302535.3099978/1‑94 (MQ=60)
CGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGCTCGTGTTGGTAGGGCTGCCTGC > SRR4302535.3220290/1‑94 (MQ=60)
CGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGCTTGCTGAACTGTTCGTGTTGGTAGGGCTGGCTGC > SRR4302535.4224002/1‑94 (MQ=60)
TGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGC > SRR4302535.311910/1‑94 (MQ=60)
GATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCC > SRR4302535.3671938/1‑94 (MQ=60)
GATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCC > SRR4302535.712317/1‑94 (MQ=60)
ATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCG > SRR4302535.753829/1‑94 (MQ=60)
ATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCG > SRR4302535.2755866/1‑94 (MQ=60)
TTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGC > SRR4302535.849879/1‑94 (MQ=60)
GTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAA > SRR4302535.4314274/1‑94 (MQ=60)
GTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAA < SRR4302535.2420933/94‑1 (MQ=60)
GTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAA > SRR4302535.2330722/1‑94 (MQ=60)
TGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAG < SRR4302535.829121/94‑1 (MQ=60)
TGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAG < SRR4302535.1430135/94‑1 (MQ=60)
TGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAG > SRR4302535.10432/1‑94 (MQ=60)
GATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGC < SRR4302535.3014909/94‑1 (MQ=60)
GATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGC < SRR4302535.4523062/94‑1 (MQ=60)
GATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGC > SRR4302535.3454378/1‑94 (MQ=60)
ATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCG > SRR4302535.3809720/1‑94 (MQ=60)
TTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGT < SRR4302535.2213544/94‑1 (MQ=60)
TATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTG < SRR4302535.2982549/94‑1 (MQ=60)
ATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGA < SRR4302535.844165/94‑1 (MQ=60)
GTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATC > SRR4302535.1193198/1‑94 (MQ=60)
GTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATC > SRR4302535.2508683/1‑94 (MQ=60)
TCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCA > SRR4302535.2732453/1‑94 (MQ=60)
TCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCA > SRR4302535.2559032/1‑94 (MQ=60)
CCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAA > SRR4302535.846560/1‑94 (MQ=60)
CCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAA > SRR4302535.1515046/1‑94 (MQ=60)
CCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAAATGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAA < SRR4302535.2528584/94‑1 (MQ=60)
CGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAAC < SRR4302535.308951/94‑1 (MQ=60)
CGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAAC > SRR4302535.486490/1‑94 (MQ=60)
CGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAAC < SRR4302535.1329397/94‑1 (MQ=60)
ACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTG < SRR4302535.4341961/94‑1 (MQ=60)
CCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGG < SRR4302535.3384174/94‑1 (MQ=60)
CCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGG < SRR4302535.1786994/94‑1 (MQ=60)
CGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGT > SRR4302535.33989/1‑94 (MQ=60)
CGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGT > SRR4302535.2733128/1‑94 (MQ=60)
TGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGC > SRR4302535.2981271/1‑94 (MQ=60)
GGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCT < SRR4302535.3636877/94‑1 (MQ=60)
GGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCT < SRR4302535.4556662/94‑1 (MQ=60)
GAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTG < SRR4302535.1043161/94‑1 (MQ=60)
AGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGA < SRR4302535.3609103/94‑1 (MQ=60)
GTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGAC < SRR4302535.3533500/94‑1 (MQ=60)
GGTAGTCCCGTAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCT > SRR4302535.678485/1‑94 (MQ=60)
GGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCT < SRR4302535.4232004/94‑1 (MQ=60)
GGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCT > SRR4302535.3584968/1‑94 (MQ=60)
GGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCT > SRR4302535.2284147/1‑94 (MQ=60)
AGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCG > SRR4302535.2036203/1‑94 (MQ=60)
CCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCG > SRR4302535.3376733/1‑94 (MQ=60)
CGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTC > SRR4302535.1884058/1‑94 (MQ=60)
CGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTC > SRR4302535.144673/1‑94 (MQ=60)
GGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCT < SRR4302535.4265119/94‑1 (MQ=60)
GGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACGTTGTGGTGCTGACCTCTGCGGCGTCT > SRR4302535.1022430/1‑94 (MQ=60)
GAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTT < SRR4302535.4216527/94‑1 (MQ=60)
GAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTT < SRR4302535.3662487/94‑1 (MQ=60)
GAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTT < SRR4302535.2470779/94‑1 (MQ=60)
AGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTC < SRR4302535.2813917/94‑1 (MQ=60)
AAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCG > SRR4302535.938093/1‑94 (MQ=60)
AAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCG < SRR4302535.938870/94‑1 (MQ=60)
AAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGC > SRR4302535.1237209/1‑94 (MQ=60)
AAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCT > SRR4302535.2658438/1‑94 (MQ=60)
AGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTA > SRR4302535.3880412/1‑94 (MQ=60)
AGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTA > SRR4302535.2745230/1‑94 (MQ=60)
GCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAA < SRR4302535.649627/94‑1 (MQ=60)
GCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAA > SRR4302535.732218/1‑94 (MQ=60)
CCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAAC < SRR4302535.4012683/94‑1 (MQ=60)
CCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACA > SRR4302535.211976/1‑94 (MQ=60)
CCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACA > SRR4302535.3616657/1‑94 (MQ=60)
CCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACA > SRR4302535.9250/1‑94 (MQ=60)
CCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACA > SRR4302535.2901277/1‑94 (MQ=60)
CGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAG < SRR4302535.2336466/94‑1 (MQ=60)
TTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAGCG > SRR4302535.1357452/1‑94 (MQ=60)
TTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAGCG < SRR4302535.149757/94‑1 (MQ=60)
TTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAGCG < SRR4302535.3057064/94‑1 (MQ=60)
GCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAGCGGCG < SRR4302535.4279788/94‑1 (MQ=60)
GCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAGCGGCG > SRR4302535.3291474/1‑94 (MQ=60)
CTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAGCGGCGT > SRR4302535.96815/1‑94 (MQ=60)
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CGATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAGCGGCGT > NC_000913/4428199‑4428385
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
