Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,444,690 |
T→C |
V1001A (GTA→GCA) |
ytfN → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,444,690 | 0 | T | C | 100.0%
| 657.1
/ NA
| 209 | V1001A (GTA→GCA) | ytfN | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (106/103); total (106/103) |
Only 100 of 224 total aligned reads displayed.
TCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGA > NC_000913/4444600‑4444779
|
tCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGcagcag < 2:2718578/93‑1 (MQ=255)
tCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGcagcag < 1:61380/93‑1 (MQ=255)
cGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAgg < 2:1654079/93‑1 (MQ=255)
gAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGc < 1:3261390/93‑1 (MQ=255)
aGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCg > 1:873833/1‑93 (MQ=255)
ggCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGt < 1:1895660/93‑1 (MQ=255)
ggCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGt > 1:3026984/1‑93 (MQ=255)
cTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGtct < 2:1776662/93‑1 (MQ=255)
cTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGtct > 1:4161209/1‑93 (MQ=255)
tACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGtctc > 1:3399888/1‑93 (MQ=255)
acacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTcc > 1:3716289/1‑93 (MQ=255)
acacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTcc < 1:2997718/93‑1 (MQ=255)
acacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTcc < 1:486562/93‑1 (MQ=255)
acCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAg < 1:2571929/93‑1 (MQ=255)
acCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAg < 1:469906/93‑1 (MQ=255)
acCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAg > 2:3981037/1‑93 (MQ=255)
aaaCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGa < 2:2355048/93‑1 (MQ=255)
aaCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAt < 1:2804342/93‑1 (MQ=255)
aaCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAt > 2:2529638/1‑93 (MQ=255)
aaCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGCGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAt > 1:2351785/1‑93 (MQ=255)
aCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtg < 2:1183947/93‑1 (MQ=255)
aCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtg < 1:3827451/93‑1 (MQ=255)
ccTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtgt < 2:313247/93‑1 (MQ=255)
cTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtgtg > 2:2584842/1‑93 (MQ=255)
cTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtgcg > 2:2250149/1‑91 (MQ=255)
tGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtgg < 1:3851126/93‑1 (MQ=255)
tGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtgg > 1:4424900/1‑93 (MQ=255)
gTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtggt > 2:4316814/1‑93 (MQ=255)
gTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtggt < 2:2886010/93‑1 (MQ=255)
gTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtggt > 1:3134196/1‑93 (MQ=255)
gTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtggt < 2:2928775/93‑1 (MQ=255)
ttACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGa < 2:1246895/93‑1 (MQ=255)
tACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGAt < 2:3209650/93‑1 (MQ=255)
aCCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATg > 1:3339164/1‑93 (MQ=255)
cccTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGc < 1:975893/93‑1 (MQ=255)
ccTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCt < 2:4532125/93‑1 (MQ=255)
ccTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCt > 1:20072/1‑93 (MQ=255)
cTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCtt > 2:4549347/1‑93 (MQ=255)
tCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGGGATGCTTa > 2:389667/1‑93 (MQ=255)
aTGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACg > 1:3203756/1‑93 (MQ=255)
tGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGa > 2:493582/1‑93 (MQ=255)
tGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGa < 1:4074084/93‑1 (MQ=255)
tGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGa > 1:934856/1‑93 (MQ=255)
ggTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGAt < 2:1412869/93‑1 (MQ=255)
gTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATa > 1:4470928/1‑93 (MQ=255)
gTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATa > 1:683243/1‑93 (MQ=255)
tCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATaa > 1:3471684/1‑93 (MQ=255)
cgcgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAc < 2:106879/93‑1 (MQ=255)
cgcgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAc < 1:649247/93‑1 (MQ=255)
gcgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATCAcc > 2:1872401/1‑93 (MQ=255)
gcgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAcc < 1:3620023/93‑1 (MQ=255)
gTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTg < 2:549674/93‑1 (MQ=255)
tGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGc < 1:4500171/93‑1 (MQ=255)
gATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCaa < 2:4286153/93‑1 (MQ=255)
gATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCaa < 2:4122536/93‑1 (MQ=255)
tGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAcc > 2:3118392/1‑93 (MQ=255)
gTCCCTTGGGCGCGCATCGTGGTGGACGATCTGGCGGCAAGGGCAGCAGGCGTCTCCAGCGATGCGGTGATGCTTGACGATAACCTGCAACCg > 2:3939916/1‑93 (MQ=255)
ccTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGaa < 1:1101955/93‑1 (MQ=255)
ccTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGaa > 2:691991/1‑93 (MQ=255)
cTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAag > 2:2412288/1‑93 (MQ=255)
cTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAag > 2:2173434/1‑93 (MQ=255)
ttGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAaga < 1:1146458/93‑1 (MQ=255)
ttGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAaga > 1:62374/1‑93 (MQ=255)
tGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAagag < 1:1158856/93‑1 (MQ=255)
gggCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGc > 2:2079626/1‑93 (MQ=255)
gggCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGc < 2:1491413/93‑1 (MQ=255)
ggCGCGCATCGTGGTGCACGATCTGCCGGAAAGAGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGcc > 1:4570326/1‑93 (MQ=255)
cgcATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGaaa < 1:4088532/93‑1 (MQ=255)
gcATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGaaaa > 2:344541/1‑93 (MQ=255)
gcATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGaaaa < 1:4287929/93‑1 (MQ=255)
aTCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACg > 2:3578601/1‑93 (MQ=255)
gtggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCg > 2:2228509/1‑93 (MQ=255)
gtggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCg > 2:2481522/1‑93 (MQ=255)
gtggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCg > 2:3349586/1‑93 (MQ=255)
tggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGt > 2:3258180/1‑93 (MQ=255)
tgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGATCCGAAAACGGCGTCGa < 2:3095283/93‑1 (MQ=255)
tgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGa < 2:2544424/93‑1 (MQ=255)
gCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAt < 1:178950/93‑1 (MQ=255)
gCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAt < 2:1259702/93‑1 (MQ=255)
cACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAtt < 1:2421729/93‑1 (MQ=255)
aCGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTc > 2:1164753/1‑93 (MQ=255)
gATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCg < 2:789695/93‑1 (MQ=255)
aTCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATACCCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGa < 2:417635/93‑1 (MQ=255)
tCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGAt < 1:4050085/93‑1 (MQ=255)
tCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGAt < 2:3405126/93‑1 (MQ=255)
tCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGAt > 1:2768596/1‑93 (MQ=255)
cTGCCGGACAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATACCCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGAtt < 1:3534289/93‑1 (MQ=255)
gCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTaa > 2:2004409/1‑93 (MQ=255)
ccGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAAc < 1:2317075/93‑1 (MQ=255)
cGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACa < 1:1360469/93‑1 (MQ=255)
cGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACa > 1:798063/1‑93 (MQ=255)
ggAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAg > 1:2624349/1‑93 (MQ=255)
ggAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAg > 2:4604514/1‑93 (MQ=255)
gAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGt < 1:491227/93‑1 (MQ=255)
aaGCGCAGCAGCCGTCTCCATCTATGTGGTGATGCTGAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTaa < 1:1529152/93‑1 (MQ=255)
aGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAc > 1:2383676/1‑93 (MQ=255)
aGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAc > 2:1460184/1‑93 (MQ=255)
gcagcaGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTg > 1:1935207/1‑93 (MQ=255)
cagcagGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGa < 2:4424900/93‑1 (MQ=255)
cagcagGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGa < 2:835829/93‑1 (MQ=255)
|
TCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGA > NC_000913/4444600‑4444779
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGT > NC_000913/4444598‑4444783
|
ATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCA < SRR4302535.2923100/94‑1 (MQ=60)
ATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCA < SRR4302535.2305606/94‑1 (MQ=60)
ATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCA > SRR4302535.2224939/1‑94 (MQ=60)
ATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCA > SRR4302535.2646749/1‑94 (MQ=60)
TTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAG < SRR4302535.1747191/94‑1 (MQ=60)
TTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAG > SRR4302535.4180578/1‑94 (MQ=60)
TTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAG < SRR4302535.1614942/94‑1 (MQ=60)
TCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGG < SRR4302535.61840/94‑1 (MQ=60)
CGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGC < SRR4302535.3504660/94‑1 (MQ=60)
CGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGC > SRR4302535.2384429/1‑94 (MQ=60)
GAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCG > SRR4302535.880026/1‑94 (MQ=60)
GAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCG < SRR4302535.3284049/94‑1 (MQ=60)
AGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGT > SRR4302535.3048175/1‑94 (MQ=60)
GGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTC < SRR4302535.1909300/94‑1 (MQ=60)
GGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTC > SRR4302535.1829071/1‑94 (MQ=60)
GCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCT > SRR4302535.4189692/1‑94 (MQ=60)
CTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTC > SRR4302535.3423551/1‑94 (MQ=60)
TACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCC > SRR4302535.3742035/1‑94 (MQ=60)
TACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCC < SRR4302535.473853/94‑1 (MQ=60)
ACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCA < SRR4302535.489974/94‑1 (MQ=60)
ACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCA > SRR4302535.3638483/1‑94 (MQ=60)
ACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCA < SRR4302535.3018741/94‑1 (MQ=60)
CACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAG < SRR4302535.624730/94‑1 (MQ=60)
ACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCAGGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGC > SRR4302535.31694/1‑94 (MQ=60)
ACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGC < SRR4302535.2590415/94‑1 (MQ=60)
ACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGC < SRR4302535.473192/94‑1 (MQ=60)
AAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGCGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAT > SRR4302535.2368644/1‑94 (MQ=60)
AACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATG < SRR4302535.2824281/94‑1 (MQ=60)
AACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATG > SRR4302535.3417894/1‑94 (MQ=60)
AACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATG < SRR4302535.19491/94‑1 (MQ=60)
AACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATG > SRR4302535.408081/1‑94 (MQ=60)
ACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGT < SRR4302535.3853853/94‑1 (MQ=60)
ACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGG > SRR4302535.4260022/1‑94 (MQ=60)
CCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTG > SRR4302535.63037/1‑94 (MQ=60)
CCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTG > SRR4302535.2882329/1‑94 (MQ=60)
CTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGG > SRR4302535.4455207/1‑94 (MQ=60)
CTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGG > SRR4302535.899977/1‑94 (MQ=60)
TGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGT < SRR4302535.3877626/94‑1 (MQ=60)
TGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGT > SRR4302535.3156016/1‑94 (MQ=60)
TGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGT < SRR4302535.2614070/94‑1 (MQ=60)
TGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGG > SRR4302535.67885/1‑94 (MQ=60)
GTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTG > SRR4302535.2998578/1‑94 (MQ=60)
TACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATG > SRR4302535.3362423/1‑94 (MQ=60)
ACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGT > SRR4302535.3555146/1‑94 (MQ=60)
CCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCT < SRR4302535.982820/94‑1 (MQ=60)
CCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCT < SRR4302535.3830094/94‑1 (MQ=60)
CCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCT > SRR4302535.20223/1‑94 (MQ=60)
CCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTT > SRR4302535.2573187/1‑94 (MQ=60)
CTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTA > SRR4302535.836659/1‑94 (MQ=60)
TCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAA > SRR4302535.4596094/1‑94 (MQ=60)
GATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACG > SRR4302535.3225942/1‑94 (MQ=60)
GATGGTCGCGTGGATGTCCCATGGACGCACATCGTGGAGCCCGATCTGCCGGCAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATACTTAACG < SRR4302535.4719217/94‑1 (MQ=60)
ATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGA > SRR4302535.941474/1‑94 (MQ=60)
TGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGAT < SRR4302535.4101959/94‑1 (MQ=60)
GGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATA > SRR4302535.688026/1‑94 (MQ=60)
GGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATA > SRR4302535.4501608/1‑94 (MQ=60)
GTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAA > SRR4302535.3495807/1‑94 (MQ=60)
CGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACC < SRR4302535.653773/94‑1 (MQ=60)
GCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCT < SRR4302535.3645116/94‑1 (MQ=60)
CGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTG < SRR4302535.3950135/94‑1 (MQ=60)
CGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCATCTCCAGCGATGTGGTGATGCTTAACGATAACCTG < SRR4302535.4354776/94‑1 (MQ=60)
TGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCA > SRR4302535.3050538/1‑94 (MQ=60)
TGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCA > SRR4302535.451798/1‑94 (MQ=60)
TGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCA < SRR4302535.4531078/94‑1 (MQ=60)
GGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAA > SRR4302535.2296594/1‑94 (MQ=60)
GGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGAGTCTCCAGCGATGCGGCGATGCTTAACGATAACCcgcac > SRR4302535.585838/1‑89 (MQ=60)
GATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAC > SRR4302535.69197/1‑94 (MQ=60)
ATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACC < SRR4302535.1979776/94‑1 (MQ=60)
CCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAA > SRR4302535.4109658/1‑94 (MQ=60)
CCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAG < SRR4302535.1109830/94‑1 (MQ=60)
CCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAG > SRR4302535.1661043/1‑94 (MQ=60)
CCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAG < SRR4302535.4548351/94‑1 (MQ=60)
CCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAG > SRR4302535.1145906/1‑94 (MQ=60)
CTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGA > SRR4302535.2660748/1‑94 (MQ=60)
CTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGA > SRR4302535.62839/1‑94 (MQ=60)
TTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAG < SRR4302535.1154627/94‑1 (MQ=60)
TGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGC < SRR4302535.1167141/94‑1 (MQ=60)
GGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGAGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCC > SRR4302535.4601491/1‑94 (MQ=60)
GGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCG < SRR4302535.2419890/94‑1 (MQ=60)
CGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAA < SRR4302535.4116508/94‑1 (MQ=60)
GCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAC < SRR4302535.4243321/94‑1 (MQ=60)
GCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAC < SRR4302535.4317263/94‑1 (MQ=60)
GCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAC < SRR4302535.3442624/94‑1 (MQ=60)
CATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACG > SRR4302535.325992/1‑94 (MQ=60)
GTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGT < SRR4302535.3321781/94‑1 (MQ=60)
GTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGT > SRR4302535.4072417/1‑94 (MQ=60)
TGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTC > SRR4302535.787366/1‑94 (MQ=60)
TGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTC > SRR4302535.3283822/1‑94 (MQ=60)
GCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATT < SRR4302535.180194/94‑1 (MQ=60)
CACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTC < SRR4302535.2439171/94‑1 (MQ=60)
CACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTC < SRR4302535.49409/94‑1 (MQ=60)
ACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCC < SRR4302535.3874374/94‑1 (MQ=60)
ATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGAT > SRR4302535.2788308/1‑94 (MQ=60)
ATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGAT < SRR4302535.1688267/94‑1 (MQ=60)
TCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATT < SRR4302535.4077812/94‑1 (MQ=60)
TCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATT < SRR4302535.1425816/94‑1 (MQ=60)
CTGCCGGACAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATACCCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTA < SRR4302535.3558827/94‑1 (MQ=60)
TGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAA > SRR4302535.1311180/1‑94 (MQ=60)
CCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACA < SRR4302535.2333657/94‑1 (MQ=60)
CCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACA > SRR4302535.803664/1‑94 (MQ=60)
CCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACA < SRR4302535.1155799/94‑1 (MQ=60)
CCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACA < SRR4302535.2817104/94‑1 (MQ=60)
CGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAG > SRR4302535.4482698/1‑94 (MQ=60)
CGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAG > SRR4302535.2643157/1‑94 (MQ=60)
CGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAG < SRR4302535.1370200/94‑1 (MQ=60)
GGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGT < SRR4302535.3036751/94‑1 (MQ=60)
GGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGA > SRR4302535.973049/1‑94 (MQ=60)
CGAAAGCGCAGCAGGTGTCTCCAGCTATGTGGTGATGCTTAACGATAACCTGCACCCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGT < SRR4302535.2111218/94‑1 (MQ=60)
GAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTA < SRR4302535.494671/94‑1 (MQ=60)
AAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAC < SRR4302535.513169/94‑1 (MQ=60)
AAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAC > SRR4302535.2400793/1‑94 (MQ=60)
AAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAC < SRR4302535.2337472/94‑1 (MQ=60)
AAGCGCAGCAGCCGTCTCCATCTATGTGGTGATGCTGAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAC < SRR4302535.1540167/94‑1 (MQ=60)
AGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACC > SRR4302535.2494399/1‑94 (MQ=60)
CGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTG > SRR4302535.1949145/1‑94 (MQ=60)
GCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGA < SRR4302535.3734851/94‑1 (MQ=60)
CAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGAT > SRR4302535.2161072/1‑94 (MQ=60)
AGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATT > SRR4302535.3096285/1‑94 (MQ=60)
AGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATT > SRR4302535.27915/1‑94 (MQ=60)
AGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATT > SRR4302535.18884/1‑94 (MQ=60)
AGCAGGCGTCTCCAACGATGTGTGGATGCTTAACGATAACCGGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATT < SRR4302535.1614678/94‑1 (MQ=60)
GCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTG < SRR4302535.1460835/94‑1 (MQ=60)
GCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTG < SRR4302535.784733/94‑1 (MQ=60)
GCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTG < SRR4302535.4027251/94‑1 (MQ=60)
CAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGT < SRR4302535.2795278/94‑1 (MQ=60)
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ATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGT > NC_000913/4444598‑4444783
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
