Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,473,339 |
A→G |
E122G (GAA→GGA) |
yjgL → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,473,339 | 0 | A | G | 100.0%
| 551.9
/ NA
| 174 | E122G (GAA→GGA) | yjgL | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (86/88); total (86/88) |
Only 100 of 181 total aligned reads displayed.
TATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATAT > NC_000913/4473250‑4473428
|
tatGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACg > 2:1137658/1‑93 (MQ=255)
atgatgGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGa < 1:4008268/93‑1 (MQ=255)
tgatgGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAg > 2:2310065/1‑93 (MQ=255)
tgatgGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAg > 2:4251456/1‑93 (MQ=255)
gatgGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGc > 1:2942281/1‑93 (MQ=255)
tgGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCgg > 1:347090/1‑93 (MQ=255)
tgGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCgg > 2:2361073/1‑93 (MQ=255)
gCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGAt > 1:455508/1‑93 (MQ=255)
gCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGAt > 1:1554210/1‑93 (MQ=255)
tCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTc < 2:1247157/93‑1 (MQ=255)
tCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTc > 2:4007545/1‑93 (MQ=255)
cATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCa < 1:375033/93‑1 (MQ=255)
tatTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCAcc > 2:1008820/1‑93 (MQ=255)
tatTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCAcc > 1:2213916/1‑93 (MQ=255)
ttAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCa > 2:1145195/1‑93 (MQ=255)
ttAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCa > 1:1169752/1‑93 (MQ=255)
ttAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCa < 1:2851848/93‑1 (MQ=255)
ttAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCa > 2:1059131/1‑93 (MQ=255)
tAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCaa < 1:3927587/93‑1 (MQ=255)
tAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCaa < 2:3278115/93‑1 (MQ=255)
aaGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAg < 1:2441764/93‑1 (MQ=255)
aaGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAg < 1:3327918/93‑1 (MQ=255)
aGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACTAGCGGATTCACCCAAgg < 2:2436452/93‑1 (MQ=255)
gTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGt < 1:1330260/93‑1 (MQ=255)
tCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGAtt > 2:2517909/1‑93 (MQ=255)
tCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGAtt < 1:3070066/93‑1 (MQ=255)
cATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATta < 1:2767973/93‑1 (MQ=255)
cATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATta < 1:943289/93‑1 (MQ=255)
aTCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATtat > 2:1025986/1‑93 (MQ=255)
aTCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATtat > 2:4174308/1‑93 (MQ=255)
aTCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATtat > 2:3620777/1‑93 (MQ=255)
aTCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATtat > 1:1646243/1‑93 (MQ=255)
tCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCGTGTAGGGGGACGAGCGGATTCACCCAAGGTGATtata < 1:2955848/93‑1 (MQ=255)
tCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATtata > 2:4155256/1‑93 (MQ=255)
cTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAg > 1:125698/1‑93 (MQ=255)
ttATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGa > 2:426947/1‑93 (MQ=255)
ttATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGa > 1:3382196/1‑93 (MQ=255)
ttATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGa > 1:839305/1‑93 (MQ=255)
ttATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGa > 1:783437/1‑93 (MQ=255)
ttCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAAt < 2:2590654/93‑1 (MQ=255)
ttCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAAt < 2:514208/93‑1 (MQ=255)
tCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAAtt < 1:3709119/93‑1 (MQ=255)
tAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTc > 2:839645/1‑93 (MQ=255)
aaaGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCa > 1:611469/1‑93 (MQ=255)
aTACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACttt > 2:1184269/1‑93 (MQ=255)
tACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTc > 1:1062119/1‑93 (MQ=255)
tACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTc > 1:1790415/1‑93 (MQ=255)
tACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTc > 1:4357102/1‑93 (MQ=255)
cTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCa > 1:3611234/1‑93 (MQ=255)
cTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCa > 2:1300976/1‑93 (MQ=255)
cTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCa < 1:3282732/93‑1 (MQ=255)
cTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCa > 2:3574355/1‑93 (MQ=255)
tAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCAc < 2:753311/93‑1 (MQ=255)
tAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCAc > 2:1907933/1‑93 (MQ=255)
tAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCAc < 1:1035321/93‑1 (MQ=255)
aTGGCAATGAAAAAATGAAGTTTAACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTa < 2:3378875/93‑1 (MQ=255)
aaTGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCact > 2:3620201/1‑93 (MQ=255)
aTGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGGGATTATAGAAATTTCACTTTCCACTATCacta > 1:2109667/1‑93 (MQ=255)
aaaaaaTGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCActacta < 1:3969471/93‑1 (MQ=255)
aaaaaTGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTAt < 2:2940713/93‑1 (MQ=255)
aaTGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATggg > 1:2601616/1‑93 (MQ=255)
aaTGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATggg < 1:4436382/93‑1 (MQ=255)
aaTGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATggg > 1:742231/1‑93 (MQ=255)
aTGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATgggg > 2:3001195/1‑93 (MQ=255)
gAAGTTTTACATTAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGAc < 2:2027179/93‑1 (MQ=255)
aaGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCATTTTCCACTATCACTACTATGGGGACt < 2:1717379/93‑1 (MQ=255)
aGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTc > 2:4650315/1‑93 (MQ=255)
aGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTc < 2:310048/93‑1 (MQ=255)
gTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTGCTATGGGGACTCg < 2:2732059/93‑1 (MQ=255)
ttttACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGt > 1:3596997/1‑93 (MQ=255)
tttACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTc < 2:1847982/93‑1 (MQ=255)
tttACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGGGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTc > 1:754265/1‑93 (MQ=255)
ttACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCa > 1:4067087/1‑93 (MQ=255)
tACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCaa < 2:2313941/93‑1 (MQ=255)
tACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCaa < 1:3198951/93‑1 (MQ=255)
aCATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAg > 1:2277036/1‑93 (MQ=255)
aCATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAg < 2:4410174/93‑1 (MQ=255)
cATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAgg < 2:3887322/93‑1 (MQ=255)
cATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAgg < 1:1232185/93‑1 (MQ=255)
cATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTAGCACTACTATGGGGACTCGTCAAgg > 2:4597277/1‑93 (MQ=255)
tGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGAc < 1:2263572/93‑1 (MQ=255)
tGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGAc > 1:3533727/1‑93 (MQ=255)
tGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGAc > 1:181959/1‑93 (MQ=255)
gAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACa < 2:110258/93‑1 (MQ=255)
gAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACa < 2:2701655/93‑1 (MQ=255)
gAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACa < 1:3413531/93‑1 (MQ=255)
gAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACa < 1:1359963/93‑1 (MQ=255)
aataatCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACAt > 1:3356596/1‑93 (MQ=255)
ataatCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATa < 2:677455/93‑1 (MQ=255)
aaatCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATAc < 1:3818406/92‑1 (MQ=255)
aatCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACa > 2:1474693/1‑93 (MQ=255)
aatCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACa < 1:1523148/93‑1 (MQ=255)
tCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGc < 2:324206/93‑1 (MQ=255)
tCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGc < 2:1977127/93‑1 (MQ=255)
tGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCAt < 2:2861669/93‑1 (MQ=255)
gTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCAtt < 1:3577782/93‑1 (MQ=255)
tAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATta < 1:4174074/93‑1 (MQ=255)
ggggGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATtata < 1:1983489/93‑1 (MQ=255)
ggggACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTatat < 2:3812612/93‑1 (MQ=255)
ggggACGAGCGGATTCACCCAAGGTGATTATAGAAATGTCACTTGCCACTATCACGACTATGGGGACTCGTCAAGGACATACAGCCATTatat < 2:2132129/93‑1 (MQ=255)
|
TATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATAT > NC_000913/4473250‑4473428
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTT > NC_000913/4473247‑4473430
|
AAATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGA > SRR4302535.4071658/1‑94 (MQ=60)
ATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAG < SRR4302535.4035690/94‑1 (MQ=60)
TGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGC > SRR4302535.2962970/1‑94 (MQ=60)
GATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCG > SRR4302535.866663/1‑94 (MQ=60)
GATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCG > SRR4302535.607569/1‑94 (MQ=60)
ATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGG < SRR4302535.340151/94‑1 (MQ=60)
ATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGG > SRR4302535.349482/1‑94 (MQ=60)
ATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGG > SRR4302535.3740263/1‑94 (MQ=60)
GGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGAT > SRR4302535.458695/1‑94 (MQ=60)
GGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGAT > SRR4302535.2045621/1‑94 (MQ=60)
GGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGAT > SRR4302535.1565407/1‑94 (MQ=60)
GCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATT > SRR4302535.3628694/1‑94 (MQ=60)
CATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCAC < SRR4302535.377629/94‑1 (MQ=60)
ATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACC > SRR4302535.2229683/1‑94 (MQ=60)
ATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCA > SRR4302535.1178105/1‑94 (MQ=60)
TTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAA < SRR4302535.2872055/94‑1 (MQ=60)
TAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAG < SRR4302535.3954417/94‑1 (MQ=60)
AAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGG < SRR4302535.2459355/94‑1 (MQ=60)
AAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGG < SRR4302535.3351071/94‑1 (MQ=60)
GTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTG < SRR4302535.1339748/94‑1 (MQ=60)
TCCGCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGA < SRR4302535.2576628/94‑1 (MQ=60)
CTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATT > SRR4302535.4459323/1‑94 (MQ=60)
TCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTA < SRR4302535.3091507/94‑1 (MQ=60)
TCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTA < SRR4302535.3412251/94‑1 (MQ=60)
CATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTAT < SRR4302535.2787682/94‑1 (MQ=60)
CATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTAT > SRR4302535.1658140/1‑94 (MQ=60)
CATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTAT < SRR4302535.949964/94‑1 (MQ=60)
ATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCCCCCAAGGCGATTATA > SRR4302535.1549924/1‑94 (MQ=60)
TCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCGTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAG < SRR4302535.2976607/94‑1 (MQ=60)
TCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAG > SRR4302535.126582/1‑94 (MQ=60)
CTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGA > SRR4302535.3405708/1‑94 (MQ=60)
CTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGA > SRR4302535.788933/1‑94 (MQ=60)
CTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGA > SRR4302535.845199/1‑94 (MQ=60)
TTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATT < SRR4302535.967330/94‑1 (MQ=60)
TTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATT < SRR4302535.3930801/94‑1 (MQ=60)
TCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTT < SRR4302535.3734806/94‑1 (MQ=60)
TCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTT > SRR4302535.1746372/1‑94 (MQ=60)
CTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTC < SRR4302535.2241171/94‑1 (MQ=60)
TAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCA > SRR4302535.350064/1‑94 (MQ=60)
TAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCA > SRR4302535.615727/1‑94 (MQ=60)
AAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACT < SRR4302535.2150754/94‑1 (MQ=60)
AGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTT < SRR4302535.2413958/94‑1 (MQ=60)
ATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTC > SRR4302535.1069680/1‑94 (MQ=60)
ATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTC > SRR4302535.1803363/1‑94 (MQ=60)
ATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTC > SRR4302535.3140499/1‑94 (MQ=60)
ATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTC > SRR4302535.4386929/1‑94 (MQ=60)
TACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCC > SRR4302535.4545120/1‑94 (MQ=60)
ACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCA < SRR4302535.3295158/94‑1 (MQ=60)
ACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCA < SRR4302535.4100182/94‑1 (MQ=60)
ACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCA > SRR4302535.3636277/1‑94 (MQ=60)
CTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCAC < SRR4302535.3305532/94‑1 (MQ=60)
CTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCAC > SRR4302535.3438082/1‑94 (MQ=60)
TAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACT < SRR4302535.1042674/94‑1 (MQ=60)
GCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCAC > SRR4302535.1256999/1‑94 (MQ=60)
GCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACAAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCAC < SRR4302535.4030810/94‑1 (MQ=60)
CAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGTTTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACT < SRR4302535.3330866/94‑1 (MQ=60)
AATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGGGATTATAGAAATTTCACTTTCCACTATCACTA > SRR4302535.2124882/1‑94 (MQ=60)
AAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTAT < SRR4302535.3996584/94‑1 (MQ=60)
AAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTAT < SRR4302535.1597339/94‑1 (MQ=60)
AAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATG < SRR4302535.2696448/94‑1 (MQ=60)
AAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGG > SRR4302535.4054040/1‑94 (MQ=60)
AAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGG > SRR4302535.747445/1‑94 (MQ=60)
AAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGG > SRR4302535.2620294/1‑94 (MQ=60)
AATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGG < SRR4302535.4466786/94‑1 (MQ=60)
GAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACT < SRR4302535.2996823/94‑1 (MQ=60)
GTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGT < SRR4302535.1114109/94‑1 (MQ=60)
GTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGT > SRR4302535.2820044/1‑94 (MQ=60)
GTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGT > SRR4302535.3621958/1‑94 (MQ=60)
TTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGGGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTC > SRR4302535.759576/1‑94 (MQ=60)
TTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCA < SRR4302535.1502874/94‑1 (MQ=60)
TTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCA > SRR4302535.4094916/1‑94 (MQ=60)
TACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAG < SRR4302535.3221092/94‑1 (MQ=60)
TACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAG > SRR4302535.2293295/1‑94 (MQ=60)
TACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAG > SRR4302535.1326986/1‑94 (MQ=60)
CATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGA < SRR4302535.1240996/94‑1 (MQ=60)
ATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGAC < SRR4302535.361399/94‑1 (MQ=60)
ATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGAC > SRR4302535.3558261/1‑94 (MQ=60)
ATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGAC < SRR4302535.3670855/94‑1 (MQ=60)
ATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGAC > SRR4302535.183218/1‑94 (MQ=60)
ATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGAC < SRR4302535.2930883/94‑1 (MQ=60)
TGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACA < SRR4302535.2279700/94‑1 (MQ=60)
GAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACAT < SRR4302535.1369689/94‑1 (MQ=60)
GAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACAT > SRR4302535.3379966/1‑94 (MQ=60)
GAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACAT < SRR4302535.3437282/94‑1 (MQ=60)
ATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATAC < SRR4302535.3955670/94‑1 (MQ=60)
TAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACA < SRR4302535.1928376/94‑1 (MQ=60)
AAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACA < SRR4302535.3844755/94‑1 (MQ=60)
AATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAG < SRR4302535.1534119/94‑1 (MQ=60)
AATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAG < SRR4302535.7649/94‑1 (MQ=60)
ATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGC > SRR4302535.817846/1‑94 (MQ=60)
CTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTGTCCACTATCGCTACTATGGGGACTCGTCAAGGTCATACAGCCAT < SRR4302535.710025/94‑1 (MQ=60)
GTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTA < SRR4302535.3602585/94‑1 (MQ=60)
TAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTAT < SRR4302535.4202641/94‑1 (MQ=60)
AGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATA < SRR4302535.118176/94‑1 (MQ=60)
GGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATAT < SRR4302535.1997770/94‑1 (MQ=60)
GGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTT < SRR4302535.1655284/94‑1 (MQ=60)
|
AAATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTT > NC_000913/4473247‑4473430
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
