Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,483,536 |
T→C |
intergenic (‑17/‑250) |
pepA ← / → yjgP |
aminopeptidase A/I/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,483,536 | 0 | T | C | 100.0%
| 673.8
/ NA
| 208 | intergenic (‑17/‑250) | pepA/yjgP | aminopeptidase A/I/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (90/118); total (90/118) |
Only 100 of 211 total aligned reads displayed.
GGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAATCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACG > NC_000913/4483446‑4483625
|
ggTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCt < 1:2204884/93‑1 (MQ=255)
cGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTaaa < 1:542889/93‑1 (MQ=255)
gAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAg > 2:3732347/1‑93 (MQ=255)
aaGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGa < 1:4008227/93‑1 (MQ=255)
aaGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGa < 1:3380656/93‑1 (MQ=255)
aGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGAc < 1:4039340/93‑1 (MQ=255)
aGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGAc < 2:3855446/93‑1 (MQ=255)
aGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGAc > 1:2432626/1‑93 (MQ=255)
gACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACa > 1:2546623/1‑93 (MQ=255)
gACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACa > 1:4481739/1‑93 (MQ=255)
gACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACa > 2:1026530/1‑93 (MQ=255)
gACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACa > 1:2946569/1‑93 (MQ=255)
gACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACa > 1:2817028/1‑93 (MQ=255)
gACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACa > 2:2801245/1‑93 (MQ=255)
cGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAc < 1:923238/93‑1 (MQ=255)
cccACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAcgg < 2:1638662/93‑1 (MQ=255)
ccACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAcggc < 2:1955402/93‑1 (MQ=255)
ccACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAcggc < 1:1013947/93‑1 (MQ=255)
ccACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAcggc > 1:168973/1‑93 (MQ=255)
acgacgATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAcggcgg > 1:3025435/1‑93 (MQ=255)
cgacgaTGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAcggcggg > 2:1060662/1‑92 (MQ=255)
cgacgaTGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGt > 1:2978961/1‑93 (MQ=255)
cgacgaTGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGt < 1:3435738/93‑1 (MQ=255)
cgacgaTGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGt < 2:4531568/93‑1 (MQ=255)
acgaTGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTgg < 1:3995839/93‑1 (MQ=255)
gaTGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCt > 2:3958646/1‑93 (MQ=255)
aTGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTa < 2:2640399/93‑1 (MQ=255)
aTGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTa > 2:4493307/1‑93 (MQ=255)
gCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACa < 1:145987/93‑1 (MQ=255)
aGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGa < 1:3240899/93‑1 (MQ=255)
aGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGa < 2:1755666/93‑1 (MQ=255)
aGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGa < 2:4257538/93‑1 (MQ=255)
aGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGa < 2:2603987/93‑1 (MQ=255)
ggCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACaa > 2:88854/1‑76 (MQ=255)
ggCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACaa < 1:88854/76‑1 (MQ=255)
gcTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGa < 1:810631/92‑1 (MQ=255)
aCTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGa < 1:2186389/93‑1 (MQ=255)
aCTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGa < 2:3336392/93‑1 (MQ=255)
tCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAAt > 1:3659674/1‑93 (MQ=255)
tCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAAt < 2:2191428/93‑1 (MQ=255)
cGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTg > 1:1329959/1‑93 (MQ=255)
gCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGc < 2:1764961/93‑1 (MQ=255)
cTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCa > 2:2404077/1‑93 (MQ=255)
gTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAg > 1:4275738/1‑93 (MQ=255)
gTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAg > 1:2258870/1‑93 (MQ=255)
gTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAg > 1:3982410/1‑93 (MQ=255)
tttCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGc < 2:273968/93‑1 (MQ=255)
ttCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCt < 1:1129123/93‑1 (MQ=255)
tctcCGGGCTACCGCTTTTTACACTAAGCTCCATGCACTACGCTCCTGAACCTTAAAGACAGCGGCGGTGGCTACAGATAGAATTGCAAGCtt < 1:2297344/93‑1 (MQ=255)
tctcCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCtt > 2:1413723/1‑93 (MQ=255)
ctcCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCCCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCttt < 2:2216594/93‑1 (MQ=255)
tcCGGTCTACCGCTTTTTACACTAAACTCCAGGCACTACGCTCTTTTATCATAAAGACAACGGCGTTGGCTATAGATAGAATAGCAAGCCTTc > 1:4685577/1‑93 (MQ=255)
tcCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTc > 2:4505893/1‑93 (MQ=255)
ggCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTaa > 1:4449837/1‑93 (MQ=255)
cTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACt < 1:1627212/93‑1 (MQ=255)
cTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACt < 2:2395302/93‑1 (MQ=255)
aCCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCa < 1:4535704/93‑1 (MQ=255)
aCCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCa > 2:1929370/1‑93 (MQ=255)
ccGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCAt < 2:442429/93‑1 (MQ=255)
cGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATg < 1:2327837/93‑1 (MQ=255)
gCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGt > 2:3667495/1‑93 (MQ=255)
cTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTc > 2:1383925/1‑93 (MQ=255)
cTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTc > 1:3273324/1‑93 (MQ=255)
tttttACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTcc > 2:3526262/1‑93 (MQ=255)
ttttACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCg > 2:2417892/1‑93 (MQ=255)
tttACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGc < 2:1718507/93‑1 (MQ=255)
ttACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCt < 2:2825713/93‑1 (MQ=255)
acacTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGt < 2:406068/93‑1 (MQ=255)
acacTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGt < 2:3041251/93‑1 (MQ=255)
acacTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGt < 2:2977571/93‑1 (MQ=255)
acTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTg > 1:2637949/1‑93 (MQ=255)
acTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTg < 2:3701232/93‑1 (MQ=255)
cTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGc < 2:2257407/93‑1 (MQ=255)
cTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTAGTAACTCATGTCCGCTGTTGc > 1:767962/1‑93 (MQ=255)
aaaCTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGa < 1:2020981/93‑1 (MQ=255)
aaaCTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGa < 2:341227/93‑1 (MQ=255)
aaaCTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGa < 2:1282271/93‑1 (MQ=255)
aaCTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGAt > 1:1848796/1‑93 (MQ=255)
aaCTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGAt < 2:2864621/93‑1 (MQ=255)
aaCTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGAt < 2:578756/93‑1 (MQ=255)
cTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGa < 1:1786207/93‑1 (MQ=255)
cTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGa < 2:4328077/93‑1 (MQ=255)
tCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGAc < 2:833031/93‑1 (MQ=255)
ccATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGACTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACt < 1:24824/93‑1 (MQ=255)
cATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACtt > 1:1102918/1‑93 (MQ=255)
aTGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTc > 1:4603179/1‑93 (MQ=255)
cACTACGCCCCTGAACCTTAAAGACAACGGCGTTGTCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCgtg < 2:2881033/93‑1 (MQ=255)
aCTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCgtgt > 1:949503/1‑93 (MQ=255)
cTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCAGCTGTTGCGATGACTTCGTGtt > 1:3784531/1‑93 (MQ=255)
tACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTa > 2:2527410/1‑93 (MQ=255)
tACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTa > 2:518100/1‑93 (MQ=255)
tACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTa > 1:4155092/1‑93 (MQ=255)
aCGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTaa < 2:1983203/93‑1 (MQ=255)
aCGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTaa < 1:3716268/93‑1 (MQ=255)
cTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCt > 2:4685321/1‑93 (MQ=255)
tCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCtt < 1:383672/93‑1 (MQ=255)
tCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCtt < 1:4046956/93‑1 (MQ=255)
ccTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTa < 2:1149853/93‑1 (MQ=255)
tGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAAc > 2:4000803/1‑93 (MQ=255)
gAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACg > 2:2148249/1‑93 (MQ=255)
|
GGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAATCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACG > NC_000913/4483446‑4483625
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTGGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAATCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACGTTAT > NC_000913/4483443‑4483629
|
CGTGGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAAC > SRR4302535.4110457/1‑94 (MQ=60)
GTGGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACC > SRR4302535.3110767/1‑94 (MQ=60)
GTGGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACC < SRR4302535.3360810/94‑1 (MQ=60)
GGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTT < SRR4302535.2220589/94‑1 (MQ=60)
TCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGGACTACGCTCCTGAACCTTAAA < SRR4302535.1490849/94‑1 (MQ=60)
CGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAG < SRR4302535.546684/94‑1 (MQ=60)
CGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAG < SRR4302535.838364/94‑1 (MQ=60)
AAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGAC > SRR4302535.2450151/1‑94 (MQ=60)
AAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGAC < SRR4302535.2212277/94‑1 (MQ=60)
AAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGAC < SRR4302535.3404159/94‑1 (MQ=60)
AAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGAC < SRR4302535.4035649/94‑1 (MQ=60)
AGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACA < SRR4302535.4066990/94‑1 (MQ=60)
AGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACA > SRR4302535.2564949/1‑94 (MQ=60)
AGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACA > SRR4302535.4512499/1‑94 (MQ=60)
AGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACA > SRR4302535.2967275/1‑94 (MQ=60)
AGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACA > SRR4302535.2837036/1‑94 (MQ=60)
AGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACA > SRR4302535.939081/1‑94 (MQ=60)
ttccgatctgcgtggtAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAC < SRR4302535.89482/78‑1 (MQ=60)
ACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAC < SRR4302535.3833911/94‑1 (MQ=60)
CGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACG < SRR4302535.929780/94‑1 (MQ=60)
CGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACG < SRR4302535.2159830/94‑1 (MQ=60)
GCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGG > SRR4302535.911923/1‑94 (MQ=60)
GCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGG > SRR4302535.4363661/1‑94 (MQ=60)
CCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGC < SRR4302535.2807660/94‑1 (MQ=60)
CCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGC > SRR4302535.170147/1‑94 (MQ=60)
CCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCG < SRR4302535.1021156/94‑1 (MQ=60)
CACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGG > SRR4302535.3046614/1‑94 (MQ=60)
CACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGG < SRR4302535.379957/94‑1 (MQ=60)
ACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGT > SRR4302535.2999862/1‑94 (MQ=60)
ACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGT > SRR4302535.2421529/1‑94 (MQ=60)
ACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGT < SRR4302535.3015114/94‑1 (MQ=60)
CGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTG < SRR4302535.3459615/94‑1 (MQ=60)
CGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTG < SRR4302535.143374/94‑1 (MQ=60)
CGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTG < SRR4302535.2490703/94‑1 (MQ=60)
GACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGG > SRR4302535.709321/1‑94 (MQ=60)
ACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGC < SRR4302535.4023179/94‑1 (MQ=60)
CGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCT < SRR4302535.4618361/94‑1 (MQ=60)
GATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTA < SRR4302535.505407/94‑1 (MQ=60)
TGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACA < SRR4302535.2553571/94‑1 (MQ=60)
GCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAG < SRR4302535.147003/94‑1 (MQ=60)
CAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGA < SRR4302535.165018/94‑1 (MQ=60)
AGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGAT < SRR4302535.3263402/94‑1 (MQ=60)
AGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGAT < SRR4302535.2979591/94‑1 (MQ=60)
GCTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAA < SRR4302535.816299/94‑1 (MQ=60)
ACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAA < SRR4302535.2201969/94‑1 (MQ=60)
CTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAAT > SRR4302535.3685005/1‑94 (MQ=60)
TCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATT < SRR4302535.1756015/94‑1 (MQ=60)
TCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATT < SRR4302535.4708959/94‑1 (MQ=60)
CCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTG > SRR4302535.1339445/1‑94 (MQ=60)
CGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGC > SRR4302535.3264992/1‑94 (MQ=60)
GCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCA > SRR4302535.1873157/1‑94 (MQ=60)
GCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCA > SRR4302535.4034981/1‑94 (MQ=60)
TGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAG > SRR4302535.4305005/1‑94 (MQ=60)
TGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAG > SRR4302535.2274952/1‑94 (MQ=60)
TGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAG > SRR4302535.4009619/1‑94 (MQ=60)
TGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAG < SRR4302535.3978839/94‑1 (MQ=60)
GTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGC > SRR4302535.4114042/1‑94 (MQ=60)
GTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGC > SRR4302535.2260029/1‑94 (MQ=60)
TTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTT < SRR4302535.1137185/94‑1 (MQ=60)
TTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGC‑CCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTT > SRR4302535.2731400/1‑94 (MQ=60)
TCTCCGGGCTACCGCTTTTTACACTAAGCTCCATGCACTACGCTCCTGAACCTTAAAGACAGCGGCGGTGGCTACAGATAGAATTGCAAGCTTT < SRR4302535.2313784/94‑1 (MQ=60)
CTCCGGTCTACCGCTTTTTACACTAAACTCCAGGCACTACGCTCTTTTATCATAAAGACAACGGCGTTGGCTATAGATAGAATAGCAAGCCTTC > SRR4302535.4717302/1‑94 (MQ=44)
CTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTC > SRR4302535.1030249/1‑94 (MQ=60)
CCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGT < SRR4302535.2342086/94‑1 (MQ=60)
CGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTA > SRR4302535.960109/1‑94 (MQ=60)
GGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAA > SRR4302535.4480358/1‑94 (MQ=60)
GCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACT < SRR4302535.3429212/94‑1 (MQ=60)
CTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTC < SRR4302535.1638957/94‑1 (MQ=60)
CTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTC > SRR4302535.2305697/1‑94 (MQ=60)
TACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCA > SRR4302535.4541070/1‑94 (MQ=60)
ACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCAT < SRR4302535.4493884/94‑1 (MQ=60)
ACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCAT < SRR4302535.4566738/94‑1 (MQ=60)
CCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATG > SRR4302535.2177299/1‑94 (MQ=60)
CGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGT < SRR4302535.2344491/94‑1 (MQ=60)
GCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTC > SRR4302535.3296059/1‑94 (MQ=60)
CTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCC < SRR4302535.847460/94‑1 (MQ=60)
CTTTGTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCC < SRR4302535.4227564/94‑1 (MQ=60)
TTTTTACACTAATCTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCG < SRR4302535.3503395/94‑1 (MQ=60)
TTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGC > SRR4302535.3099645/1‑94 (MQ=60)
CACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTG > SRR4302535.2656843/1‑94 (MQ=60)
ACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTAGTAACTCATGTCCGCTGTTGC > SRR4302535.773368/1‑94 (MQ=60)
CTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCG > SRR4302535.79417/1‑94 (MQ=60)
AAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGAT < SRR4302535.2035550/94‑1 (MQ=60)
AAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGAT > SRR4302535.1862120/1‑94 (MQ=60)
AACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATG < SRR4302535.4269614/94‑1 (MQ=60)
AACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATG < SRR4302535.4022962/94‑1 (MQ=60)
CTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGAC < SRR4302535.1799132/94‑1 (MQ=60)
CCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTT > SRR4302535.1110798/1‑94 (MQ=60)
CCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGACTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTT < SRR4302535.25016/94‑1 (MQ=60)
CATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTC > SRR4302535.4634479/1‑94 (MQ=60)
TGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGT < SRR4302535.3691361/94‑1 (MQ=60)
GCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTG < SRR4302535.4067432/94‑1 (MQ=60)
CACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGT > SRR4302535.956227/1‑94 (MQ=60)
ACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCAGCTGTTGCGATGACTTCGTGTT > SRR4302535.3810641/1‑94 (MQ=60)
CTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTA > SRR4302535.3374475/1‑94 (MQ=60)
CTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTA > SRR4302535.4183538/1‑94 (MQ=60)
CTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTA < SRR4302535.1114301/94‑1 (MQ=60)
ACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAAT < SRR4302535.1855587/94‑1 (MQ=60)
ACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAAT > SRR4302535.3716506/1‑94 (MQ=60)
ACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAAT < SRR4302535.3742013/94‑1 (MQ=60)
CGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATC > SRR4302535.1166852/1‑94 (MQ=60)
TCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTA < SRR4302535.4074658/94‑1 (MQ=60)
TCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTA < SRR4302535.386331/94‑1 (MQ=60)
CCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAA > SRR4302535.2863587/1‑94 (MQ=60)
CTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAAC < SRR4302535.4055644/94‑1 (MQ=60)
TGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACG < SRR4302535.2655375/94‑1 (MQ=60)
AACCTTAAAGACAACGGCGGCGGCTACAGATAGAATTGTAAGCTTTCGTAACTCATGTCCGCTGTTGCGCTGACTTCGTGTTAATCTTAACGCT > SRR4302535.3678221/1‑94 (MQ=60)
CCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACGTTAT < SRR4302535.1684942/94‑1 (MQ=60)
|
CGTGGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAATCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACGTTAT > NC_000913/4483443‑4483629
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
