Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,485,021 |
A→G |
S46G (AGT→GGT) |
b4262 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,485,021 | 0 | A | G | 100.0%
| 666.2
/ NA
| 208 | S46G (AGT→GGT) | b4262 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (92/116); total (92/116) |
Only 100 of 221 total aligned reads displayed.
TTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGG > NC_000913/4484931‑4485110
|
tCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGtt > 1:1291819/1‑93 (MQ=255)
tCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGtt < 1:3696442/93‑1 (MQ=255)
tCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGtt > 1:4573421/1‑93 (MQ=255)
caccacCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTa < 1:3272016/93‑1 (MQ=255)
accaccATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTac < 2:4188195/93‑1 (MQ=255)
accaccATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTac > 1:1754173/1‑93 (MQ=255)
caccaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTacga < 1:3850951/93‑1 (MQ=255)
caccaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTacga > 2:1579555/1‑93 (MQ=255)
accaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTacgac < 1:3110311/93‑1 (MQ=255)
accaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTacgac > 2:445528/1‑93 (MQ=255)
ccaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTacgacg < 1:1454873/93‑1 (MQ=255)
ccaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTacgacg > 2:2498532/1‑93 (MQ=255)
catcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGAcgc < 1:2207533/93‑1 (MQ=255)
catcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGAcgc < 1:2382468/93‑1 (MQ=255)
atcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGAcgcg > 1:1015536/1‑93 (MQ=255)
atcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGAcgcg > 2:188248/1‑93 (MQ=255)
tcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGTCGGGCAGGGGGGTTACGACGCGt > 1:3310383/1‑93 (MQ=255)
tcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGt < 1:1827469/93‑1 (MQ=255)
tcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGt < 1:4045834/93‑1 (MQ=255)
tcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGt > 1:2736714/1‑93 (MQ=255)
catGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGtt < 2:2653559/93‑1 (MQ=255)
atgatgACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTa < 1:3884317/93‑1 (MQ=255)
tgatgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAg < 1:3232571/93‑1 (MQ=255)
tgatgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAg < 2:3125164/93‑1 (MQ=255)
tgatgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTCTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAg > 1:760731/1‑93 (MQ=255)
atgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGgc < 1:3858078/93‑1 (MQ=255)
tgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGgcg > 1:3352467/1‑93 (MQ=255)
gaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGgcgc < 1:1936405/93‑1 (MQ=255)
acacTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCa < 2:1803945/93‑1 (MQ=255)
cacTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAg < 2:171550/93‑1 (MQ=255)
acTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAgg > 1:4236958/1‑93 (MQ=255)
cTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGa > 1:3518276/1‑93 (MQ=255)
cTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGa < 2:1192241/93‑1 (MQ=255)
cTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGa > 1:1360457/1‑93 (MQ=255)
gTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAAt < 1:2989800/93‑1 (MQ=255)
ttCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATg > 2:4592280/1‑93 (MQ=255)
ttCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATg < 1:2316222/93‑1 (MQ=255)
cATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATTta < 2:1119527/93‑1 (MQ=255)
cATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGta < 1:2868015/93‑1 (MQ=255)
aTGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGtat < 1:1104349/93‑1 (MQ=255)
aTGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGtat < 2:4540604/93‑1 (MQ=255)
tGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGtata < 2:2286469/93‑1 (MQ=255)
cTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATAcc > 2:4310433/1‑93 (MQ=255)
gtCGCTGTGGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAGGCCGGGCAGGGGGGTTACGACGCGTTAGGTGCAGGAATGTATACCTTGCt < 1:1622527/93‑1 (MQ=255)
gCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGGTAGGCGCAGGAATGTATACCTTGCTGAg > 1:2794881/1‑93 (MQ=255)
cTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGc > 2:4102575/1‑93 (MQ=255)
gggCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGcc > 2:2626743/1‑93 (MQ=255)
ggCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCg > 1:2962018/1‑93 (MQ=255)
gCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGa < 2:3615219/93‑1 (MQ=255)
tATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGa < 1:1505967/93‑1 (MQ=255)
tCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGAtg > 2:1613901/1‑93 (MQ=255)
tCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGAtg > 1:901904/1‑93 (MQ=255)
aaGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGAtgtg > 2:2388269/1‑93 (MQ=255)
aaGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGAtgtg > 1:450573/1‑93 (MQ=255)
aaGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGAtgtg > 2:2959908/1‑93 (MQ=255)
gTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCa < 2:242871/93‑1 (MQ=255)
gTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCa < 2:2528771/93‑1 (MQ=255)
tttGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAg > 1:215726/1‑93 (MQ=255)
ttGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGa < 2:4627783/93‑1 (MQ=255)
tGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGAt < 1:484816/93‑1 (MQ=255)
gTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGAtc < 1:537692/93‑1 (MQ=255)
gTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGAtc < 1:3619368/93‑1 (MQ=255)
tCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGAtct > 2:3430607/1‑93 (MQ=255)
tCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGAtct > 2:3716248/1‑93 (MQ=255)
cGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGAtctt > 2:40106/1‑93 (MQ=255)
gATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTTCTGAGCGTGCCGAAAGATGTGCAGAtcttc > 1:2822775/1‑93 (MQ=255)
gATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGAtcttt > 1:1657355/1‑92 (MQ=255)
gATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGAtcttc > 1:1151413/1‑93 (MQ=255)
gATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGAtcttc > 1:2770412/1‑93 (MQ=255)
aTCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGAtcttct < 1:2234758/93‑1 (MQ=255)
aTCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGAtcttct < 2:290582/93‑1 (MQ=255)
aGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTcc < 2:404729/93‑1 (MQ=255)
aGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTcc < 2:689508/93‑1 (MQ=255)
gCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTccc < 2:3291226/93‑1 (MQ=255)
gCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTccc < 2:965428/93‑1 (MQ=255)
gCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTccc > 1:3988016/1‑93 (MQ=255)
tGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGa < 1:257102/93‑1 (MQ=255)
tGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGa < 1:4423431/93‑1 (MQ=255)
gAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGGATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGAt > 2:786330/1‑93 (MQ=255)
aaaaaaGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATg < 1:4405449/93‑1 (MQ=255)
aaaaaGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTTAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATgg < 2:3708313/93‑1 (MQ=255)
aaaaaGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATgg > 2:3797355/1‑93 (MQ=255)
aaaaGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATggc > 2:2081463/1‑93 (MQ=255)
aaaaGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATggc < 2:4093271/93‑1 (MQ=255)
aaaGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATggcg < 2:669027/93‑1 (MQ=255)
aaaGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATggcg < 1:3198992/93‑1 (MQ=255)
aaaGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATggcg > 2:3823301/1‑93 (MQ=255)
aGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATggcggc < 2:346453/93‑1 (MQ=255)
gCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGct > 1:1701547/1‑93 (MQ=255)
ccGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGctc < 1:1958869/93‑1 (MQ=255)
cGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGctct < 1:478090/93‑1 (MQ=255)
ggCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGc > 2:3375776/1‑93 (MQ=255)
ggCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGc < 2:3192762/93‑1 (MQ=255)
gCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCt < 1:3723966/93‑1 (MQ=255)
gCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCt > 2:1281181/1‑93 (MQ=255)
cAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCtt < 2:302081/93‑1 (MQ=255)
ggggggTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTgg > 1:4379810/1‑93 (MQ=255)
ggggggTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTgg < 1:97882/93‑1 (MQ=255)
ggggggTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTgg < 1:2468752/93‑1 (MQ=255)
ggggGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTggg < 1:2046354/93‑1 (MQ=255)
|
TTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGG > NC_000913/4484931‑4485110
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATTT‑TCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGGGC > NC_000913/4484928‑4485112
|
ATTT‑TCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGG < SRR4302535.2683959/94‑1 (MQ=60)
TTTGTCACCACCATCATGATGACACTTTTCATGCTGGTCTCGCCGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGG < SRR4302535.2683957/94‑1 (MQ=60)
TT‑TCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGT < SRR4302535.154773/94‑1 (MQ=60)
T‑TCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTT > SRR4302535.4604596/1‑94 (MQ=60)
T‑TCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTT > SRR4302535.1301026/1‑94 (MQ=60)
TCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTA < SRR4302535.3722023/94‑1 (MQ=60)
CACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTAC > SRR4302535.1766849/1‑94 (MQ=60)
CACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTAC < SRR4302535.3294746/94‑1 (MQ=60)
CCCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACG < SRR4302535.385863/94‑1 (MQ=60)
ACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAACAAAGCCGGGCAGGGGGGTTACG > SRR4302535.1436450/1‑94 (MQ=60)
ACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACG > SRR4302535.483193/1‑94 (MQ=60)
CACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGAC < SRR4302535.3877451/94‑1 (MQ=60)
ACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACG < SRR4302535.3131966/94‑1 (MQ=60)
CCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGC < SRR4302535.1465287/94‑1 (MQ=60)
CCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGC > SRR4302535.4638303/1‑94 (MQ=60)
CCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGC > SRR4302535.441219/1‑94 (MQ=60)
CATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCG < SRR4302535.2223256/94‑1 (MQ=60)
CATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCG < SRR4302535.2399576/94‑1 (MQ=60)
CATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCG > SRR4302535.1022755/1‑94 (MQ=60)
CATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCG < SRR4302535.959947/94‑1 (MQ=60)
ATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGTCGGGCAGGGGGGTTACGACGCGT > SRR4302535.3333418/1‑94 (MQ=60)
ATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGT > SRR4302535.2756236/1‑94 (MQ=60)
TCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTT < SRR4302535.4073530/94‑1 (MQ=60)
TCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTT < SRR4302535.1840665/94‑1 (MQ=60)
ATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAG < SRR4302535.2771226/94‑1 (MQ=60)
ATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAG < SRR4302535.2850928/94‑1 (MQ=60)
ATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAG > SRR4302535.540890/1‑94 (MQ=60)
ATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAG > SRR4302535.2381209/1‑94 (MQ=60)
ATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAG < SRR4302535.3910965/94‑1 (MQ=60)
ATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTCTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAG > SRR4302535.766093/1‑94 (MQ=60)
TGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGG < SRR4302535.3254987/94‑1 (MQ=60)
TGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGG > SRR4302535.3024495/1‑94 (MQ=60)
GATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGC > SRR4302535.2832233/1‑94 (MQ=60)
GATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGC < SRR4302535.1463577/94‑1 (MQ=60)
ATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCG > SRR4302535.3375815/1‑94 (MQ=60)
ATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCG > SRR4302535.1055892/1‑94 (MQ=60)
ATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCG < SRR4302535.3884635/94‑1 (MQ=60)
GACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCA > SRR4302535.3130030/1‑94 (MQ=60)
GACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCA < SRR4302535.1950351/94‑1 (MQ=60)
CACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGG > SRR4302535.3319065/1‑94 (MQ=60)
CACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGG > SRR4302535.4265954/1‑94 (MQ=60)
CACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGG > SRR4302535.3134005/1‑94 (MQ=60)
ACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGA > SRR4302535.3542717/1‑94 (MQ=60)
ACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGA > SRR4302535.1370188/1‑94 (MQ=60)
ACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGA < SRR4302535.1696972/94‑1 (MQ=60)
TGTTCATGGTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAAT < SRR4302535.4023786/94‑1 (MQ=60)
GTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATG < SRR4302535.3010763/94‑1 (MQ=60)
TTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGT < SRR4302535.223559/94‑1 (MQ=60)
TTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGT < SRR4302535.2332796/94‑1 (MQ=60)
TCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTA < SRR4302535.4002976/94‑1 (MQ=60)
CATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTAT < SRR4302535.2888327/94‑1 (MQ=60)
CATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTAT < SRR4302535.3890644/94‑1 (MQ=60)
CATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTAT < SRR4302535.3705058/94‑1 (MQ=60)
ATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGCATGTATA > SRR4302535.781844/1‑94 (MQ=60)
ATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATA < SRR4302535.3229170/94‑1 (MQ=60)
ATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATA > SRR4302535.566565/1‑94 (MQ=60)
ATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATA < SRR4302535.1112239/94‑1 (MQ=60)
GCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACC < SRR4302535.4441353/94‑1 (MQ=60)
TGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTT < SRR4302535.1728339/94‑1 (MQ=60)
TGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTT < SRR4302535.280165/94‑1 (MQ=60)
TGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTT < SRR4302535.3879600/94‑1 (MQ=60)
GGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTG > SRR4302535.4183893/1‑94 (MQ=60)
TGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCT < SRR4302535.4495125/94‑1 (MQ=60)
TGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCT < SRR4302535.2937260/94‑1 (MQ=60)
GTCGCTGTGGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAGGCCGGGCAGGGGGGTTACGACGCGTTAGGTGCAGGAATGTATACCTTGCTG < SRR4302535.1634239/94‑1 (MQ=60)
GTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTG < SRR4302535.3548517/94‑1 (MQ=60)
CGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGGTAGGCGCAGGAATGTATACCTTGCTGAG > SRR4302535.2814767/1‑94 (MQ=60)
CTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCG > SRR4302535.3730914/1‑94 (MQ=60)
GGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCG > SRR4302535.2982809/1‑94 (MQ=60)
GGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCG > SRR4302535.4015479/1‑94 (MQ=60)
GCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAA < SRR4302535.127446/94‑1 (MQ=60)
CATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAA > SRR4302535.3435908/1‑94 (MQ=60)
CATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAA > SRR4302535.2790528/1‑94 (MQ=60)
ATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAG < SRR4302535.3768774/94‑1 (MQ=60)
ATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAG < SRR4302535.2410350/94‑1 (MQ=60)
TTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGA > SRR4302535.1611827/1‑94 (MQ=60)
TATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGAT < SRR4302535.1516794/94‑1 (MQ=60)
TATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGAT < SRR4302535.4349732/94‑1 (MQ=60)
TATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGAT > SRR4302535.445660/1‑94 (MQ=60)
TATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGAT > SRR4302535.337520/1‑94 (MQ=60)
ATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATG > SRR4302535.908290/1‑94 (MQ=60)
ATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATG < SRR4302535.1657022/94‑1 (MQ=60)
CAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTG < SRR4302535.2989751/94‑1 (MQ=60)
CAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTG < SRR4302535.3257373/94‑1 (MQ=60)
CAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTG > SRR4302535.453728/1‑94 (MQ=60)
CAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTG < SRR4302535.4594342/94‑1 (MQ=60)
AAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGC > SRR4302535.2044617/1‑94 (MQ=60)
AGTTTGTCTATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCA < SRR4302535.2433058/94‑1 (MQ=60)
AGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCA > SRR4302535.3373727/1‑94 (MQ=60)
GTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAG > SRR4302535.217204/1‑94 (MQ=60)
TGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATC < SRR4302535.488215/94‑1 (MQ=60)
TGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATC > SRR4302535.2299426/1‑94 (MQ=60)
GTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCT < SRR4302535.3644460/94‑1 (MQ=60)
GTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCT < SRR4302535.541448/94‑1 (MQ=60)
CGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTTCTGAGCGTGCCGAAAGATGTGCAGATCTTC > SRR4302535.2842815/1‑94 (MQ=60)
CGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTT > SRR4302535.1669339/1‑94 (MQ=60)
CGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTC > SRR4302535.2790141/1‑94 (MQ=60)
CGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTC > SRR4302535.1159636/1‑94 (MQ=60)
CGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTC > SRR4302535.1146909/1‑94 (MQ=60)
GATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCT < SRR4302535.1481777/94‑1 (MQ=60)
ATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTT < SRR4302535.1971212/94‑1 (MQ=60)
ATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTT < SRR4302535.2250655/94‑1 (MQ=60)
ATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTT > SRR4302535.1806378/1‑94 (MQ=60)
AGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCC < SRR4302535.1866508/94‑1 (MQ=60)
AGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCC > SRR4302535.4015286/1‑94 (MQ=60)
GCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCG > SRR4302535.676948/1‑94 (MQ=60)
GCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCG < SRR4302535.2682858/94‑1 (MQ=60)
TGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCCGGAATGTATACCTTGCTGAGCGTGCCGCAAGGTGTGAAGCTCTTCTTCCCGAG > SRR4302535.1239429/1‑94 (MQ=60)
TGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGAT < SRR4302535.258877/94‑1 (MQ=60)
TGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGAT < SRR4302535.4453726/94‑1 (MQ=60)
TGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGAT < SRR4302535.2086895/94‑1 (MQ=60)
GAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATG < SRR4302535.2205521/94‑1 (MQ=60)
AAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGG < SRR4302535.4435600/94‑1 (MQ=60)
AAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGC < SRR4302535.2493463/94‑1 (MQ=60)
AAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGG < SRR4302535.3221133/94‑1 (MQ=60)
AGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCT > SRR4302535.1713845/1‑94 (MQ=60)
AGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCT < SRR4302535.1744307/94‑1 (MQ=60)
AGCCGGGCAGGGGGGTTACGACGCATTAGGCGCAGCAATGTATACCTTGCTGAGCGTGCCGAAAGATGTTCAGATATTCTTCCCGATGGCGGCT < SRR4302535.2162710/94‑1 (MQ=60)
CCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCT < SRR4302535.1972981/94‑1 (MQ=60)
CGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTG < SRR4302535.481441/94‑1 (MQ=60)
GCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTT < SRR4302535.3749764/94‑1 (MQ=60)
AGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGG > SRR4302535.1334523/1‑94 (MQ=60)
AGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGG > SRR4302535.4409776/1‑94 (MQ=60)
GGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGG < SRR4302535.2486548/94‑1 (MQ=60)
GGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGG < SRR4302535.98575/94‑1 (MQ=60)
GGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGGG < SRR4302535.2061091/94‑1 (MQ=60)
GGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGGG > SRR4302535.189330/1‑94 (MQ=60)
GGGGTTACGACGCGTTAGGCGCAGGAATGTATGCCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGGGC < SRR4302535.2328061/94‑1 (MQ=60)
GGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGGGC < SRR4302535.4483311/94‑1 (MQ=60)
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ATTT‑TCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGGGC > NC_000913/4484928‑4485112
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
