Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,485,021	A→G	S46G (AGT→GGT)	b4262 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,485,021	0	A	G	99.1%	1070.9 / ‑2.2	342	S46G (AGT→GGT)	b4262	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/2); new base G (164/175); total (165/177)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.65e-01

Only 100 of 360 total aligned reads displayed.

TTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGG  >  NC_000913/4484931‑4485110

ttCACCACTATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGt                                                                                         <  2:1671484/93‑1 (MQ=255)

ttCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGt                                                                                         <  1:7467927/93‑1 (MQ=255)

  caccacCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTa                                                                                       >  2:4472165/1‑93 (MQ=255)

   accaccATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTac                                                                                      >  2:4251759/1‑93 (MQ=255)

   accaccATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGTTac                                                                                      >  2:2731542/1‑93 (MQ=255)

     caccaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTacga                                                                                    <  2:7069161/93‑1 (MQ=255)

       ccaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTccgacg                                                                                  >  2:3247204/1‑93 (MQ=255)

       ccaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTacgacg                                                                                  >  2:7697648/1‑93 (MQ=255)

       ccaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTacgacg                                                                                  >  1:1960817/1‑93 (MQ=255)

         atcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGAcgcg                                                                                >  2:216310/1‑93 (MQ=255)

           catGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGtt                                                                              >  1:3813502/1‑93 (MQ=255)

            atgatgACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTa                                                                             <  1:6237427/93‑1 (MQ=255)

            atgatgACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTa                                                                             >  1:2703784/1‑93 (MQ=255)

            atgatgACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTa                                                                             <  1:7134929/93‑1 (MQ=255)

             tgatgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAg                                                                            >  2:5469694/1‑93 (MQ=255)

             tgatgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAg                                                                            <  2:7272601/93‑1 (MQ=255)

             tgatgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAg                                                                            >  2:2796449/1‑93 (MQ=255)

             tgatgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAg                                                                            >  2:7588902/1‑93 (MQ=255)

             tgatgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAg                                                                            >  1:1253820/1‑93 (MQ=255)

             tgatgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAg                                                                            <  2:2453390/93‑1 (MQ=255)

              gatgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAgg                                                                           <  1:2496536/93‑1 (MQ=255)

              gatgaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAgg                                                                           <  1:7292995/93‑1 (MQ=255)

                 gaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGgcgc                                                                        <  1:5791408/93‑1 (MQ=255)

                 gaCACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGgcgc                                                                        >  2:616322/1‑93 (MQ=255)

                  acacTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCa                                                                       <  2:4017040/93‑1 (MQ=255)

                     cTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGa                                                                    >  1:1106330/1‑93 (MQ=255)

                      tGTTCATGCTGGTTTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGaa                                                                   <  2:1836511/93‑1 (MQ=255)

                      tGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGaa                                                                   >  1:986584/1‑93 (MQ=255)

                      tGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGaa                                                                   <  1:7431161/93‑1 (MQ=255)

                      tGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGaa                                                                   <  1:605380/93‑1 (MQ=255)

                       gTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAAt                                                                  >  2:3865048/1‑93 (MQ=255)

                          cATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGta                                                               <  2:1359876/93‑1 (MQ=255)

                            tGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGtata                                                             >  2:4052666/1‑93 (MQ=255)

                            tGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGtata                                                             >  2:883035/1‑93 (MQ=255)

                            tGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGtata                                                             <  1:406200/93‑1 (MQ=255)

                            tGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGgata                                                             >  1:3678648/1‑93 (MQ=255)

                              cTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATAcc                                                           <  1:1031784/93‑1 (MQ=255)

                              cTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATAcc                                                           <  1:1431810/93‑1 (MQ=255)

                               tGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCt                                                          >  1:4347109/1‑93 (MQ=255)

                                ggTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCtt                                                         <  2:4361485/93‑1 (MQ=255)

                                ggTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCtt                                                         <  2:3407838/93‑1 (MQ=255)

                                ggTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCtt                                                         <  1:758448/93‑1 (MQ=255)

                                 gtgtCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTg                                                        >  1:5908647/1‑93 (MQ=255)

                                 gtgtCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTg                                                        >  2:2188161/1‑93 (MQ=255)

                                  tgtCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGc                                                       <  1:3523495/93‑1 (MQ=255)

                                  ggtCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGc                                                       <  2:7495839/92‑1 (MQ=255)

                                   gtCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCt                                                      <  1:3009474/93‑1 (MQ=255)

                                    tCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTg                                                     <  2:1964162/93‑1 (MQ=255)

                                     cGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGa                                                    <  1:7911033/93‑1 (MQ=255)

                                     cGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGa                                                    >  1:1559051/1‑93 (MQ=255)

                                        tGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCg                                                 <  1:4980627/93‑1 (MQ=255)

                                        tGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCg                                                 >  2:5248645/1‑93 (MQ=255)

                                         gTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGt                                                <  2:1113380/93‑1 (MQ=255)

                                         gTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGt                                                <  2:5858387/93‑1 (MQ=255)

                                         gTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGt                                                <  2:6397031/93‑1 (MQ=255)

                                            gggCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATCCCTTGCTGAGCGTGcc                                             >  2:2555756/1‑93 (MQ=255)

                                              gCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGCTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGa                                           >  1:3313765/1‑93 (MQ=255)

                                               cATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGaa                                          >  2:3626309/1‑93 (MQ=255)

                                                aTTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGaaa                                         >  1:4938568/1‑93 (MQ=255)

                                                aTTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGaaa                                         <  1:41746/93‑1 (MQ=255)

                                                 ttATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATATCTTGCTGAGCGTGCCGAAAg                                        >  1:2848521/1‑93 (MQ=255)

                                                 ttATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAg                                        >  2:556557/1‑93 (MQ=255)

                                                 ttATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAg                                        >  1:4539265/1‑93 (MQ=255)

                                                  tATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGa                                       >  2:1543600/1‑93 (MQ=255)

                                                  tATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATATATACCTTGCTGAGCGTGCCGAAAGa                                       <  1:5672310/93‑1 (MQ=255)

                                                   aTCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGAt                                      >  1:5334593/1‑93 (MQ=255)

                                                   aTCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGAt                                      <  1:2188044/93‑1 (MQ=255)

                                                    tCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGAtg                                     <  2:3319154/93‑1 (MQ=255)

                                                    tCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGAtg                                     <  2:7786629/93‑1 (MQ=255)

                                                     cAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGAtgt                                    <  2:313378/93‑1 (MQ=255)

                                                     cAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGAtgt                                    <  2:6122814/93‑1 (MQ=255)

                                                      aaGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGAtgtg                                   <  2:4776941/93‑1 (MQ=255)

                                                        gTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCa                                 <  2:6588968/93‑1 (MQ=255)

                                                        gTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCa                                 <  1:508918/93‑1 (MQ=255)

                                                          ttGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGa                               <  2:5695686/93‑1 (MQ=255)

                                                              cGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGAtctt                           <  1:5851113/93‑1 (MQ=255)

                                                                aTCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGAtcttct                         >  1:3245351/1‑93 (MQ=255)

                                                                 tCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATcttctt                        >  1:7534661/1‑93 (MQ=255)

                                                                 gaaGCTGAAAAAAGCCGGGCAGGGGGGTTACCACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATcttctt                        <  1:925450/91‑1 (MQ=255)

                                                                  cAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCttcttc                       <  2:4941905/93‑1 (MQ=255)

                                                                   aGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTcc                      <  1:7758778/93‑1 (MQ=255)

                                                                   aGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTcc                      <  1:638908/93‑1 (MQ=255)

                                                                   aGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTcc                      >  1:669407/1‑93 (MQ=255)

                                                                    gCTGCAAACCGCCGGGCAGGGGGATTACGCCGCGTTCGGCACAGGGATGTATACCTTGCTAAGCGTGCCGACAGATGTGCAGCTCTTCTTcca                     <  1:7021654/93‑2 (MQ=255)

                                                                    gCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTccc                     <  1:5500953/93‑1 (MQ=255)

                                                                      tGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGa                   <  2:3572931/93‑1 (MQ=255)

                                                                      tGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGa                   >  1:6935259/1‑93 (MQ=255)

                                                                         aaaaaGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATgg                <  1:1344060/93‑1 (MQ=255)

                                                                           aaaGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATggcg              >  1:1851384/1‑93 (MQ=255)

                                                                           aaaGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATggcg              <  2:6843326/93‑1 (MQ=255)

                                                                            aaGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATggcgg             >  1:469583/1‑93 (MQ=255)

                                                                              gCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGct           >  2:442687/1‑93 (MQ=255)

                                                                               ccGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGctc          <  2:549579/93‑1 (MQ=255)

                                                                                 gggCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTg        >  1:4141113/1‑93 (MQ=255)

                                                                                 gggCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTg        >  1:2259334/1‑93 (MQ=255)

                                                                                    cAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCtt     <  2:3032968/93‑1 (MQ=255)

                                                                                    cAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCtt     >  1:2616831/1‑93 (MQ=255)

                                                                                      ggggggTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTgg   >  2:6511958/1‑93 (MQ=255)

                                                                                      ggggggTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCAGATGGCGGCTCTGCTTgg   >  1:1533243/1‑93 (MQ=255)

                                                                                       ggggGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTggg  <  2:1238043/93‑1 (MQ=255)

TTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGG  >  NC_000913/4484931‑4485110

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGGGCGT  >  NC_000913/4484928‑4485114

ATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGG                                                                                               <  SRR4302543.7340759/94‑1 (MQ=60)

ATTTTCACCACCATCATGATGACACTGTTCATGCTGGGGTCGCTGTCGGGAATTATAAAGTTTGTCGATCGGTTGAAAAAAGCCGGGCGGGGGG                                                                                               >  SRR4302543.2514921/1‑94 (MQ=60)

  TTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGT                                                                                             >  SRR4302543.1479112/1‑94 (MQ=60)

   TTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTT                                                                                            <  SRR4302543.3133113/94‑1 (MQ=60)

   TTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTT                                                                                            <  SRR4302543.7539449/94‑1 (MQ=60)

   TTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTT                                                                                            >  SRR4302543.5861926/1‑94 (MQ=60)

     CACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTAC                                                                                          <  SRR4302543.7516376/94‑1 (MQ=60)

     CACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTAC                                                                                          <  SRR4302543.5740181/94‑1 (MQ=60)

     CACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTAC                                                                                          >  SRR4302543.6737145/1‑94 (MQ=60)

     CACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGGTAC                                                                                          >  SRR4302543.2987508/1‑94 (MQ=60)

       CCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGA                                                                                        >  SRR4302543.4076516/1‑94 (MQ=60)

       CCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGA                                                                                        >  SRR4302543.3298504/1‑94 (MQ=60)

        CACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGAC                                                                                       >  SRR4302543.6388933/1‑94 (MQ=60)

        CACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGAC                                                                                       <  SRR4302543.3801855/94‑1 (MQ=60)

         ACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACG                                                                                      <  SRR4302543.7529605/94‑1 (MQ=60)

         ACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACG                                                                                      >  SRR4302543.2669585/1‑94 (MQ=60)

         ACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACG                                                                                      >  SRR4302543.1978407/1‑94 (MQ=60)

           CATCATGATGACACTGTTCATGCTGGTGTCTCTGTCGGGCATTATCAAGTTTGTCGATCATCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCG                                                                                    >  SRR4302543.7072039/1‑94 (MQ=60)

           CATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCG                                                                                    <  SRR4302543.6582994/94‑1 (MQ=60)

           CATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCG                                                                                    >  SRR4302543.2392778/1‑94 (MQ=60)

           CATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCG                                                                                    >  SRR4302543.5373548/1‑94 (MQ=60)

           CATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCG                                                                                    <  SRR4302543.1109891/94‑1 (MQ=60)

            ATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGT                                                                                   >  SRR4302543.92240/1‑94 (MQ=60)

             TCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTT                                                                                  <  SRR4302543.7606794/94‑1 (MQ=60)

             TCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTT                                                                                  >  SRR4302543.3847119/1‑94 (MQ=60)

             TCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTT                                                                                  <  SRR4302543.759074/94‑1 (MQ=60)

              CATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTA                                                                                 >  SRR4302543.1514490/1‑94 (MQ=60)

              CATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTA                                                                                 >  SRR4302543.3756506/1‑94 (MQ=60)

              CATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTA                                                                                 >  SRR4302543.2728316/1‑94 (MQ=60)

               ATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAG                                                                                <  SRR4302543.7204265/94‑1 (MQ=60)

               ATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAG                                                                                >  SRR4302543.1265058/1‑94 (MQ=60)

               ATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAG                                                                                <  SRR4302543.1472677/94‑1 (MQ=60)

               ATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAG                                                                                <  SRR4302543.6296287/94‑1 (MQ=60)

               ATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAG                                                                                >  SRR4302543.6679964/1‑94 (MQ=60)

               ATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAG                                                                                >  SRR4302543.133837/1‑94 (MQ=60)

                TGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGG                                                                               >  SRR4302543.421048/1‑94 (MQ=60)

                TGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGG                                                                               <  SRR4302543.7745814/94‑1 (MQ=60)

                TGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGG                                                                               <  SRR4302543.1784537/94‑1 (MQ=60)

                 GATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGC                                                                              <  SRR4302543.7363377/94‑1 (MQ=60)

                 GATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGC                                                                              <  SRR4302543.2519183/94‑1 (MQ=60)

                  ATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGTCG                                                                             >  SRR4302543.351486/1‑94 (MQ=60)

                  ATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCG                                                                             >  SRR4302543.2911766/1‑94 (MQ=60)

                  ATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCG                                                                             <  SRR4302543.700618/94‑1 (MQ=60)

                  ATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCG                                                                             >  SRR4302543.7637656/1‑94 (MQ=60)

                  ATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCG                                                                             <  SRR4302543.5147057/94‑1 (MQ=60)

                  ATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGATACGACGCGTTAGGCG                                                                             >  SRR4302543.784946/1‑94 (MQ=60)

                    GACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCA                                                                           >  SRR4302543.2544997/1‑94 (MQ=60)

                    GACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCA                                                                           <  SRR4302543.7107520/94‑1 (MQ=60)

                    GACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCA                                                                           <  SRR4302543.5844099/94‑1 (MQ=60)

                     ACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAG                                                                          >  SRR4302543.6234033/1‑94 (MQ=60)

                       cccgttaATGCTGCTGTCGCTGTCGGACATTATCAAGTTTGTCGATCAGCTGAAAAAACCCGGGCAGGGGAGTTCCGACGCGTTAGGCGCAGGA                                                                        <  SRR4302543.1223056/87‑1 (MQ=60)

                       ACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGA                                                                        >  SRR4302543.1678389/1‑94 (MQ=60)

                       ACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGA                                                                        >  SRR4302543.7547834/1‑94 (MQ=60)

                       ACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGA                                                                        >  SRR4302543.1116310/1‑94 (MQ=60)

                        CTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAA                                                                       >  SRR4302543.5395751/1‑94 (MQ=60)

                        CTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAA                                                                       >  SRR4302543.995289/1‑94 (MQ=60)

                         TGTTCATGCTGGTGTCGCTGTCGGGCATTATCCAGTTTGTCGATCAGCTGAAAAAAGCCGGGCCGGGGGGTTACGACGCGTTAGGCGCAGGAAT                                                                      >  SRR4302543.1408987/1‑94 (MQ=60)

                         TGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAAT                                                                      <  SRR4302543.610918/94‑1 (MQ=60)

                         TGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAAT                                                                      <  SRR4302543.7502407/94‑1 (MQ=60)

                          GTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATG                                                                     >  SRR4302543.5976974/1‑94 (MQ=60)

                          GTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATG                                                                     >  SRR4302543.927679/1‑94 (MQ=60)

                           tttgTGCTGGTGGCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGT                                                                    <  SRR4302543.4630691/90‑1 (MQ=60)

                           TTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGT                                                                    >  SRR4302543.5921617/1‑94 (MQ=60)

                           TTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGT                                                                    <  SRR4302543.2332451/94‑1 (MQ=60)

                            TCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTA                                                                   <  SRR4302543.2758746/94‑1 (MQ=60)

                            TCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTAGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTA                                                                   <  SRR4302543.2758747/94‑1 (MQ=60)

                              ATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATA                                                                 <  SRR4302543.7476250/94‑1 (MQ=60)

                              ATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATA                                                                 >  SRR4302543.1240482/1‑94 (MQ=60)

                              ATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATA                                                                 <  SRR4302543.2645069/94‑1 (MQ=60)

                              ATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATA                                                                 <  SRR4302543.4123276/94‑1 (MQ=60)

                              ATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATA                                                                 <  SRR4302543.928171/94‑1 (MQ=60)

                              ATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGGATA                                                                 >  SRR4302543.3710959/1‑94 (MQ=60)

                               TGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATAC                                                                <  SRR4302543.409947/94‑1 (MQ=60)

                               TGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATAC                                                                <  SRR4302543.454659/94‑1 (MQ=60)

                                 CTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCT                                                              <  SRR4302543.1040946/94‑1 (MQ=60)

                                 CTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCT                                                              <  SRR4302543.1444758/94‑1 (MQ=60)

                                 CTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCT                                                              >  SRR4302543.4386518/1‑94 (MQ=60)

                                 CTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCT                                                              <  SRR4302543.6845134/94‑1 (MQ=60)

                                 CTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCT                                                              <  SRR4302543.3311751/94‑1 (MQ=60)

                                 CTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCT                                                              <  SRR4302543.5560346/94‑1 (MQ=60)

                                  TGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTT                                                             <  SRR4302543.2228132/94‑1 (MQ=60)

                                   GGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTG                                                            >  SRR4302543.5962587/1‑94 (MQ=60)

                                   GGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTG                                                            <  SRR4302543.7089001/94‑1 (MQ=60)

                                   GGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTG                                                            <  SRR4302543.765145/94‑1 (MQ=60)

                                     TGTCGTTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCT                                                          <  SRR4302543.7412105/94‑1 (MQ=60)

                                     TGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCT                                                          <  SRR4302543.4357706/94‑1 (MQ=60)

                                     TGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCT                                                          <  SRR4302543.3554920/94‑1 (MQ=60)

                                      GTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTG                                                         <  SRR4302543.3036730/94‑1 (MQ=60)

                                      GTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTG                                                         <  SRR4302543.6179162/94‑1 (MQ=60)

                                      GTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTG                                                         <  SRR4302543.6813760/94‑1 (MQ=60)

                                      GTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTGAGGCGCAGGAATGTATACCTTGCTG                                                         <  SRR4302543.3036735/94‑1 (MQ=60)

                                       TCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGA                                                        >  SRR4302543.155475/1‑94 (MQ=60)

                                       TCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGA                                                        >  SRR4302543.1356979/1‑94 (MQ=60)

                                       TCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGA                                                        >  SRR4302543.1572980/1‑94 (MQ=60)

                                        CGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAG                                                       <  SRR4302543.7985358/94‑1 (MQ=60)

                                        CGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAG                                                       >  SRR4302543.7675880/1‑94 (MQ=60)

                                         GCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGC                                                      >  SRR4302543.5629194/1‑94 (MQ=60)

                                         GCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGC                                                      >  SRR4302543.7644513/1‑94 (MQ=60)

                                           TGTCGGGCATTATCAAGTTTGTCGATCAGCTTAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGT                                                    <  SRR4302543.5025963/94‑1 (MQ=60)

                                           TGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGTGT                                                    <  SRR4302543.5025965/94‑1 (MQ=60)

                                           TGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGT                                                    >  SRR4302543.4614637/1‑94 (MQ=60)

                                           TGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGT                                                    <  SRR4302543.5025964/94‑1 (MQ=60)

                                            TTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTG                                                   <  SRR4302543.2623563/94‑1 (MQ=60)

                                            GTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTG                                                   <  SRR4302543.3297542/94‑1 (MQ=60)

                                               GGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCG                                                >  SRR4302543.3712002/1‑94 (MQ=60)

                                                GGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGCTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGA                                               >  SRR4302543.3343676/1‑94 (MQ=60)

                                                  CATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAA                                             >  SRR4302543.1886948/1‑94 (MQ=60)

                                                  CATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAA                                             >  SRR4302543.4983541/1‑94 (MQ=60)

                                                  CAGTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAA                                             <  SRR4302543.5669332/94‑1 (MQ=60)

                                                   ATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATATCTTGCTGAGCGTGCCGAAAG                                            >  SRR4302543.2874527/1‑94 (MQ=60)

                                                   ATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAG                                            <  SRR4302543.992645/94‑1 (MQ=60)

                                                   ATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAG                                            >  SRR4302543.2129995/1‑94 (MQ=60)

                                                   ATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAG                                            >  SRR4302543.2548586/1‑94 (MQ=60)

                                                   ATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAG                                            >  SRR4302543.4580594/1‑94 (MQ=60)

                                                   ATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAG                                            >  SRR4302543.1218013/1‑94 (MQ=60)

                                                   ATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAG                                            <  SRR4302543.42128/94‑1 (MQ=60)

                                                   ATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAG                                            >  SRR4302543.5120863/1‑94 (MQ=60)

                                                    TTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGA                                           <  SRR4302543.208039/94‑1 (MQ=60)

                                                    TTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGA                                           >  SRR4302543.7956337/1‑94 (MQ=60)

                                                    TTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGA                                           >  SRR4302543.7893393/1‑94 (MQ=60)

                                                    TTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGA                                           <  SRR4302543.4287948/94‑1 (MQ=60)

                                                     TATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGAT                                          >  SRR4302543.5382836/1‑94 (MQ=60)

                                                     TATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGAT                                          >  SRR4302543.5929589/1‑94 (MQ=60)

                                                     TATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATATATACCTTGCTGAGCGTGCCGAAAGAT                                          <  SRR4302543.5724081/94‑1 (MQ=60)

                                                     TATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGAT                                          <  SRR4302543.4539013/94‑1 (MQ=60)

                                                      ATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATG                                         <  SRR4302543.2207677/94‑1 (MQ=60)

                                                       TCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGT                                        >  SRR4302543.5742800/1‑94 (MQ=60)

                                                        CAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGGGCCGAAAGATGTG                                       >  SRR4302543.2027545/1‑94 (MQ=60)

                                                         AAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGC                                      >  SRR4302543.948135/1‑94 (MQ=60)

                                                           GTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAG                                    <  SRR4302543.7394881/94‑1 (MQ=60)

                                                           GTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAG                                    <  SRR4302543.1124046/94‑1 (MQ=60)

                                                           GTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAG                                    <  SRR4302543.513649/94‑1 (MQ=60)

                                                             TTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGAT                                  >  SRR4302543.5859759/1‑94 (MQ=60)

                                                               GTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCT                                <  SRR4302543.3492530/94‑1 (MQ=60)

                                                               GTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCT                                <  SRR4302543.6021007/94‑1 (MQ=60)

                                                               GTCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCT                                >  SRR4302543.2768907/1‑94 (MQ=60)

                                                                TCGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTT                               <  SRR4302543.3013716/94‑1 (MQ=60)

                                                                 CGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTC                              <  SRR4302543.4190753/94‑1 (MQ=60)

                                                                 CGATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTC                              <  SRR4302543.5904354/94‑1 (MQ=60)

                                                                  GATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCT                             >  SRR4302543.3274700/1‑94 (MQ=60)

                                                                  GATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCT                             >  SRR4302543.7319721/1‑94 (MQ=60)

                                                                  GATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCT                             <  SRR4302543.697208/94‑1 (MQ=60)

                                                                  GATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCT                             >  SRR4302543.4129123/1‑94 (MQ=60)

                                                                  GATCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCT                             >  SRR4302543.4163143/1‑94 (MQ=60)

                                                                   ATCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTT                            >  SRR4302543.7606503/1‑94 (MQ=60)

                                                                    gaAGCTGAAAAAAGCCGGGCAGGGGGGTTACCACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTC                           <  SRR4302543.933543/92‑1 (MQ=60)

                                                                    TCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTC                           <  SRR4302543.11084/94‑1 (MQ=60)

                                                                    TCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGAAGATCTTCTTC                           >  SRR4302543.2230690/1‑94 (MQ=60)

                                                                     CAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCC                          >  SRR4302543.675573/1‑94 (MQ=60)

                                                                     CAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCC                          <  SRR4302543.5271725/94‑1 (MQ=60)

                                                                      AGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCC                         <  SRR4302543.644741/94‑1 (MQ=60)

                                                                      AGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCC                         <  SRR4302543.3573973/94‑1 (MQ=60)

                                                                      AGCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCC                         <  SRR4302543.7832004/94‑1 (MQ=60)

                                                                       GCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCG                        <  SRR4302543.5550878/94‑1 (MQ=60)

                                                                       GCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCG                        >  SRR4302543.3629034/1‑94 (MQ=60)

                                                                       GCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCG                        <  SRR4302543.4942356/94‑1 (MQ=60)

                                                                       GCTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCG                        >  SRR4302543.7338263/1‑94 (MQ=60)

                                                                        CTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGA                       >  SRR4302543.7000494/1‑94 (MQ=60)

                                                                        CTGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGA                       <  SRR4302543.7538290/94‑1 (MQ=60)

                                                                         TGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGAT                      >  SRR4302543.715825/1‑94 (MQ=60)

                                                                         TGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGAT                      <  SRR4302543.2231379/94‑1 (MQ=60)

                                                                         TGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGAT                      >  SRR4302543.4968855/1‑94 (MQ=60)

                                                                         TGAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGAT                      <  SRR4302543.4383962/94‑1 (MQ=60)

                                                                          GAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATG                     <  SRR4302543.3596904/94‑1 (MQ=60)

                                                                          GAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATG                     <  SRR4302543.482296/94‑1 (MQ=60)

                                                                          GAAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATG                     <  SRR4302543.4423894/94‑1 (MQ=60)

                                                                           AAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGG                    <  SRR4302543.5410784/94‑1 (MQ=60)

                                                                           AAAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGG                    <  SRR4302543.4001434/94‑1 (MQ=60)

                                                                            AAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGC                   <  SRR4302543.502308/94‑1 (MQ=60)

                                                                            AAAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGC                   <  SRR4302543.1356068/94‑1 (MQ=60)

                                                                             AAAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCG                  >  SRR4302543.1868033/1‑94 (MQ=60)

                                                                              AAAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGG                 >  SRR4302543.473943/1‑94 (MQ=60)

                                                                               AAGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGC                >  SRR4302543.5073953/1‑94 (MQ=60)

                                                                                AGCCGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCT               <  SRR4302543.6115556/94‑1 (MQ=60)

                                                                                   CGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTG            >  SRR4302543.2279925/1‑94 (MQ=60)

                                                                                   CGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTG            >  SRR4302543.6304399/1‑94 (MQ=60)

                                                                                   CGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTG            >  SRR4302543.6077774/1‑94 (MQ=60)

                                                                                   CGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTG            >  SRR4302543.4178508/1‑94 (MQ=60)

                                                                                   CGGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTG            <  SRR4302543.5844957/94‑1 (MQ=60)

                                                                                    GGGCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGGGGCTCTGC           >  SRR4302543.1438029/1‑94 (MQ=60)

                                                                                      GCAGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTT         >  SRR4302543.2640562/1‑94 (MQ=60)

                                                                                        AGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGG       >  SRR4302543.1546984/1‑94 (MQ=60)

                                                                                        AGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGG       >  SRR4302543.1884276/1‑94 (MQ=60)

                                                                                        AGGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCAGATGGCGGCTCTGCTTGG       >  SRR4302543.1546983/1‑94 (MQ=60)

                                                                                         GGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACGTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGG      <  SRR4302543.1315641/94‑1 (MQ=60)

                                                                                         GGGGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGG      <  SRR4302543.1737730/94‑1 (MQ=60)

                                                                                           GGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGGGC    <  SRR4302543.3102584/94‑1 (MQ=60)

                                                                                           GGGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGGGC    <  SRR4302543.3102585/94‑1 (MQ=60)

                                                                                            GGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGGGCG   <  SRR4302543.518430/94‑1 (MQ=60)

                                                                                            GGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGGGCG   <  SRR4302543.5106242/94‑1 (MQ=60)

                                                                                            GGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGGGCG   >  SRR4302543.4584595/1‑94 (MQ=60)

                                                                                            GGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGGGCG   <  SRR4302543.3182333/94‑1 (MQ=60)

                                                                                            GGGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGGGCG   <  SRR4302543.35098/94‑1 (MQ=60)

                                                                                             GGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGGGCGT  >  SRR4302543.83989/1‑94 (MQ=60)

ATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGGGCGT  >  NC_000913/4484928‑4485114

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`