Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,572,726 |
T→C |
P341P (CCT→CCC) |
yjiU → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,572,726 | 0 | T | C | 100.0%
| 629.6
/ NA
| 198 | P341P (CCT→CCC) | yjiU | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (108/90); total (108/90) |
Only 100 of 204 total aligned reads displayed.
CCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCTAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCA > NC_000913/4572636‑4572815
|
ccATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGCATTCATGCGTCGCCCCaa > 1:2123065/1‑93 (MQ=255)
ccATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCaa > 2:4553389/1‑93 (MQ=255)
aTTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAAc < 1:718770/93‑1 (MQ=255)
ttATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACg > 1:2292405/1‑93 (MQ=255)
ttATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACg > 1:4479379/1‑93 (MQ=255)
ttATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACg > 2:3618571/1‑93 (MQ=255)
ttATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACg < 1:313689/93‑1 (MQ=255)
tATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACgg > 2:4456119/1‑93 (MQ=255)
aTCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGa > 1:798132/1‑93 (MQ=255)
tCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGAc > 1:3252569/1‑93 (MQ=255)
tCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGAc > 1:3110364/1‑93 (MQ=255)
ttAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGGATTCATGCGTCGCCCCACACGGACTa > 2:546442/1‑93 (MQ=255)
ttAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTa < 2:3647483/93‑1 (MQ=255)
aaGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAAc < 1:4304880/93‑1 (MQ=255)
aGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACa < 1:3015527/93‑1 (MQ=255)
aGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACa < 1:3870493/93‑1 (MQ=255)
gCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAg > 1:2637726/1‑93 (MQ=255)
gCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAg < 2:656975/93‑1 (MQ=255)
gCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAg > 1:1270365/1‑93 (MQ=255)
ccTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGc > 1:2342675/1‑93 (MQ=255)
cTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGcc > 1:331971/1‑93 (MQ=255)
cTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGcc > 1:1659269/1‑93 (MQ=255)
tGAGGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTTGCCCCAAACCGACTAAGAGCCt > 2:343234/1‑93 (MQ=255)
tGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCt > 2:1501634/1‑93 (MQ=255)
gAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGcccg > 1:3696720/1‑91 (MQ=255)
gAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTg > 2:3105844/1‑93 (MQ=255)
aaGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTgg > 1:840928/1‑93 (MQ=255)
aGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGa < 2:4185926/93‑1 (MQ=255)
gtgtTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGaa < 2:227709/93‑1 (MQ=255)
tgtTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGTAATTCATTCGTCGCCCCAAACGGACTAACAGCCTGGaaa < 2:3723938/93‑1 (MQ=255)
tgtTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGaaa < 1:4578168/93‑1 (MQ=255)
tgtTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGaaa > 1:1190482/1‑93 (MQ=255)
tgtTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGaaa > 2:778000/1‑93 (MQ=255)
tttAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAaca > 1:3523844/1‑93 (MQ=255)
tttAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGGTGTTGTTCCGGGAATTCATGCGTCGACCCACACGGACTAACAGCCTGGAAaca > 2:1121360/1‑93 (MQ=255)
aaTGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAg > 1:198989/1‑93 (MQ=255)
aaaaCGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGc < 2:622180/93‑1 (MQ=255)
aaaaCGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGc < 1:1067307/93‑1 (MQ=255)
aaaaCGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGc < 1:2995582/93‑1 (MQ=255)
aaaaCGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGCCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGc < 2:4081046/93‑1 (MQ=255)
aaaCGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCt > 1:4395243/1‑93 (MQ=255)
cggcCCCTNTNAGCTTTCTGCAATNTTGTTCTTCCGGGAATTCATGCGTCGCCACAAACGGACAAACAGCCTGGAAACACAGGGGCTGGTTCa < 2:858439/93‑1 (MQ=255)
cggcCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCa < 1:2030125/93‑1 (MQ=255)
ccccTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggtt > 1:4378804/1‑93 (MQ=255)
ccTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttgg > 2:2899677/1‑93 (MQ=255)
ccTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggctgg > 2:1874086/1‑93 (MQ=255)
ccTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGGTCAggttgg > 2:2561801/1‑93 (MQ=255)
cTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttggt > 1:686032/1‑93 (MQ=255)
cTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttggt < 1:1094721/93‑1 (MQ=255)
ttAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttggtt < 2:886827/93‑1 (MQ=255)
ttAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttggtt > 1:1017477/1‑93 (MQ=255)
ttAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttggtt > 2:1919572/1‑93 (MQ=255)
tAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTa < 1:2695574/93‑1 (MQ=255)
aaGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCCggttggtttc > 2:3868415/1‑91 (MQ=255)
aaGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTAc < 1:3991677/93‑1 (MQ=255)
aaGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTAc > 2:1052865/1‑93 (MQ=255)
aGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTAcc > 1:822790/1‑93 (MQ=255)
gCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCa > 1:763325/1‑93 (MQ=255)
cTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAg < 1:1261655/93‑1 (MQ=255)
tttCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAgg > 1:1542537/1‑93 (MQ=255)
tttCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAgg > 1:4620325/1‑93 (MQ=255)
ttCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAggg < 2:878251/93‑1 (MQ=255)
tCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAgggg < 2:1827885/93‑1 (MQ=255)
gAAATGTTGTTGTTCCGGGAATTCATGCGTCTCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGGTCAGGGTGGTTACCAGGGGCTg > 2:155136/1‑93 (MQ=255)
gAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGccg > 2:3227826/1‑91 (MQ=255)
gAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTg > 2:1914937/1‑93 (MQ=255)
gAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTg > 1:3804053/1‑93 (MQ=255)
gAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAAGGGCTGGTTCAAGTTGGTTAGCAAGGGCTg > 2:477529/1‑93 (MQ=255)
aaaTGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTgg > 1:1735401/1‑93 (MQ=255)
aaTGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGga > 2:3609853/1‑93 (MQ=255)
aTGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGgag > 1:1476684/1‑93 (MQ=255)
tgttgttgtTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGgaga > 2:3024894/1‑93 (MQ=255)
gttgttgttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTAACAGGGGCTGGGGaa > 2:4339636/1‑93 (MQ=255)
ttgttgttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGgaa > 2:2705323/1‑93 (MQ=255)
tgttgttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGaaaa < 1:1872627/93‑1 (MQ=255)
gttgttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAAt < 1:1346233/93‑1 (MQ=255)
ttgttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATa < 2:164186/93‑1 (MQ=255)
ttgttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATa < 2:2242149/93‑1 (MQ=255)
tgttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATAc > 2:3737955/1‑93 (MQ=255)
gttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACa > 2:1218457/1‑93 (MQ=255)
ttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGGAAATACAt > 2:24486/1‑93 (MQ=255)
ccGGGAATTCATGCGTCGCCCCAGACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATaa < 1:2584803/93‑1 (MQ=255)
ccGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATaa < 1:3383/93‑1 (MQ=255)
cGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAag < 1:1425449/93‑1 (MQ=255)
cGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAag < 1:423141/93‑1 (MQ=255)
gggAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAaga > 2:2829344/1‑93 (MQ=255)
ggAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAagag < 2:3717014/93‑1 (MQ=255)
aaTTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGcc > 1:3493997/1‑93 (MQ=255)
tCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCt < 2:2327540/93‑1 (MQ=255)
tCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCt < 1:624966/93‑1 (MQ=255)
cATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCtt < 2:2649465/93‑1 (MQ=255)
cATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCtt < 2:467120/93‑1 (MQ=255)
tGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGc > 1:4119842/1‑93 (MQ=255)
tGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGc > 2:689493/1‑93 (MQ=255)
tGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGc > 1:333393/1‑93 (MQ=255)
gCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCa < 1:4330471/93‑1 (MQ=255)
tCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTg < 1:2814237/93‑1 (MQ=255)
cGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTgg < 1:2722470/93‑1 (MQ=255)
cGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTgg < 2:3957000/93‑1 (MQ=255)
ccccAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCa > 2:392044/1‑93 (MQ=255)
|
CCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCTAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCA > NC_000913/4572636‑4572815
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AACCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCTAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGGAA > NC_000913/4572634‑4572819
|
AACCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCA > SRR4302535.2583300/1‑94 (MQ=60)
ACCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGCATTCATGCGTCGCCCCAA > SRR4302535.2138367/1‑94 (MQ=60)
ACCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAA > SRR4302535.658463/1‑94 (MQ=60)
ATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACG < SRR4302535.723821/94‑1 (MQ=60)
ATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACG > SRR4302535.4510131/1‑94 (MQ=60)
ATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACG > SRR4302535.2308802/1‑94 (MQ=60)
TTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGG < SRR4302535.315860/94‑1 (MQ=60)
TTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGG < SRR4302535.1941065/94‑1 (MQ=60)
TTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGG < SRR4302535.4591255/94‑1 (MQ=60)
TATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGA > SRR4302535.3774810/1‑94 (MQ=60)
TATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGA > SRR4302535.803735/1‑94 (MQ=60)
ATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCCAACGGAC > SRR4302535.2005506/1‑94 (MQ=60)
ATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGAC > SRR4302535.3275168/1‑94 (MQ=60)
ATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGAC > SRR4302535.3132019/1‑94 (MQ=60)
CTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTA > SRR4302535.2903649/1‑94 (MQ=60)
AAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACA < SRR4302535.4334333/94‑1 (MQ=60)
AGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAG > SRR4302535.1279442/1‑94 (MQ=60)
AGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAG < SRR4302535.3897093/94‑1 (MQ=60)
AGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAG < SRR4302535.3036659/94‑1 (MQ=60)
AGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAG > SRR4302535.2656620/1‑94 (MQ=60)
GCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGC > SRR4302535.2359439/1‑94 (MQ=60)
CCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGGAATGTTGTTGTTCCGGGAATTCATGCGTCTCCCCAAACGGACTAATAGCC > SRR4302535.836286/1‑94 (MQ=60)
CCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCC > SRR4302535.1671264/1‑94 (MQ=60)
CCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCC > SRR4302535.334269/1‑94 (MQ=60)
CTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCT < SRR4302535.3339089/94‑1 (MQ=60)
CTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCT < SRR4302535.772696/94‑1 (MQ=60)
TGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCCG > SRR4302535.3722303/1‑94 (MQ=60)
GAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGG > SRR4302535.846830/1‑94 (MQ=60)
AGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAA > SRR4302535.4445913/1‑94 (MQ=60)
GTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAA > SRR4302535.1199005/1‑94 (MQ=60)
TGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAAC < SRR4302535.4609356/94‑1 (MQ=60)
GTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACA > SRR4302535.3548316/1‑94 (MQ=60)
TAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAG > SRR4302535.200353/1‑94 (MQ=60)
TGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGG < SRR4302535.1026899/94‑1 (MQ=60)
AAAACGGCTGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCT < SRR4302535.1074898/94‑1 (MQ=60)
AAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCT < SRR4302535.1074897/94‑1 (MQ=60)
AAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCT < SRR4302535.3016581/94‑1 (MQ=60)
AAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCT > SRR4302535.4425321/1‑94 (MQ=60)
CGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAG < SRR4302535.2044757/94‑1 (MQ=60)
CGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAG < SRR4302535.3027356/94‑1 (MQ=60)
GCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGT < SRR4302535.401735/94‑1 (MQ=60)
CCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTT < SRR4302535.2534360/94‑1 (MQ=60)
CCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTT > SRR4302535.4408765/1‑94 (MQ=60)
CCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTG < SRR4302535.3043966/94‑1 (MQ=60)
CCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGG > SRR4302535.1573047/1‑94 (MQ=60)
CCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGG > SRR4302535.3891879/1‑94 (MQ=60)
CCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGG > SRR4302535.1228389/1‑94 (MQ=60)
CCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGT > SRR4302535.4403282/1‑94 (MQ=60)
CCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGT > SRR4302535.4350504/1‑94 (MQ=60)
CCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGT > SRR4302535.690837/1‑94 (MQ=60)
CTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTT < SRR4302535.1102511/94‑1 (MQ=60)
CTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTT < SRR4302535.1373670/94‑1 (MQ=60)
CTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTT > SRR4302535.1024708/1‑94 (MQ=60)
TTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTA > SRR4302535.1130136/1‑94 (MQ=60)
TAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTAC < SRR4302535.2714840/94‑1 (MQ=60)
AAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACC < SRR4302535.4018980/94‑1 (MQ=60)
AAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACC > SRR4302535.828557/1‑94 (MQ=60)
AGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCA < SRR4302535.1270931/94‑1 (MQ=60)
AGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCA > SRR4302535.2160050/1‑94 (MQ=60)
AGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCA > SRR4302535.768701/1‑94 (MQ=60)
GCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAG > SRR4302535.1352110/1‑94 (MQ=60)
GCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAG < SRR4302535.3384125/94‑1 (MQ=60)
CTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGG > SRR4302535.1553656/1‑94 (MQ=60)
CTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGG < SRR4302535.1270682/94‑1 (MQ=60)
CTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGG > SRR4302535.4651719/1‑94 (MQ=60)
CTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGG < SRR4302535.33496/94‑1 (MQ=60)
TTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGG < SRR4302535.769320/94‑1 (MQ=60)
TTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGG < SRR4302535.1442243/94‑1 (MQ=60)
TTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCCGGTTCAGGTTGGTTACCAGGGG < SRR4302535.1675149/94‑1 (MQ=60)
TGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTG < SRR4302535.2314266/94‑1 (MQ=60)
TGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTG > SRR4302535.3830276/1‑94 (MQ=60)
GAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGG > SRR4302535.1747947/1‑94 (MQ=60)
AATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAG > SRR4302535.1487256/1‑94 (MQ=60)
AATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAG < SRR4302535.3668059/94‑1 (MQ=60)
AATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAG < SRR4302535.1818766/94‑1 (MQ=60)
TGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAA < SRR4302535.3105638/94‑1 (MQ=60)
GTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAA > SRR4302535.3188401/1‑94 (MQ=60)
GTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAA > SRR4302535.461720/1‑94 (MQ=60)
TGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAAT < SRR4302535.1886120/94‑1 (MQ=60)
TGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAAT < SRR4302535.3519511/94‑1 (MQ=60)
TGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAAT < SRR4302535.3155323/94‑1 (MQ=60)
GTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATA < SRR4302535.1355845/94‑1 (MQ=60)
GTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATA < SRR4302535.2628873/94‑1 (MQ=60)
TTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATAC < SRR4302535.207661/94‑1 (MQ=60)
TTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATAC < SRR4302535.408924/94‑1 (MQ=60)
TGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACA < SRR4302535.610593/94‑1 (MQ=60)
TGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACA > SRR4302535.268089/1‑94 (MQ=60)
GTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACAT > SRR4302535.4292405/1‑94 (MQ=60)
GTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACAT < SRR4302535.809720/94‑1 (MQ=60)
TCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAA < SRR4302535.693795/94‑1 (MQ=60)
CCGGGATTTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAG < SRR4302535.271989/94‑1 (MQ=60)
CCGGGAATTCATGCGTCGCCCCAGACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAG < SRR4302535.2603368/94‑1 (MQ=60)
CCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAG < SRR4302535.3413/94‑1 (MQ=60)
CCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAG > SRR4302535.731558/1‑94 (MQ=60)
CCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAA > SRR4302535.4187352/1‑94 (MQ=60)
CGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGA < SRR4302535.426095/94‑1 (MQ=60)
CGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGA < SRR4302535.1435625/94‑1 (MQ=60)
GAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCC > SRR4302535.3518275/1‑94 (MQ=60)
ATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGGAAATACATAAGAGACCC > SRR4302535.4418172/1‑94 (MQ=60)
ATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCC > SRR4302535.1505990/1‑94 (MQ=60)
TTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCT < SRR4302535.280666/94‑1 (MQ=60)
TCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTT < SRR4302535.629313/94‑1 (MQ=60)
TCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTT > SRR4302535.3421038/1‑94 (MQ=60)
ATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGC > SRR4302535.335700/1‑94 (MQ=60)
ATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGC > SRR4302535.4148036/1‑94 (MQ=60)
GCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCAC < SRR4302535.4360085/94‑1 (MQ=60)
TCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGG < SRR4302535.2834236/94‑1 (MQ=60)
CGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGC < SRR4302535.2741917/94‑1 (MQ=60)
CCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGG > SRR4302535.1440774/1‑94 (MQ=60)
CCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGGA > SRR4302535.3660585/1‑94 (MQ=60)
CCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGGA > SRR4302535.371615/1‑94 (MQ=60)
CAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGGAA < SRR4302535.2773238/94‑1 (MQ=60)
|
AACCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCTAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGGAA > NC_000913/4572634‑4572819
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
