Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,572,726	T→C	P341P (CCT→CCC)	yjiU →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,572,726	0	T	C	100.0%	976.9 / NA	310	P341P (CCT→CCC)	yjiU	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (149/161); total (149/161)

Only 100 of 322 total aligned reads displayed.

CCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCTAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCA  >  NC_000913/4572636‑4572815

ccATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCaa                                                                                         >  1:5981928/1‑93 (MQ=255)

   atATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACg                                                                                      <  1:6065270/92‑1 (MQ=255)

    tATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACgg                                                                                     >  1:5553881/1‑93 (MQ=255)

     aTCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGa                                                                                    >  1:5111293/1‑93 (MQ=255)

     aTCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGa                                                                                    <  2:2864565/93‑1 (MQ=255)

      tCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACgact                                                                                   >  2:2346732/1‑90 (MQ=255)

      tCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGAc                                                                                   >  1:7340293/1‑93 (MQ=255)

      tCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGAc                                                                                   <  1:1639348/93‑1 (MQ=255)

      tCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGAc                                                                                   <  2:1893149/93‑1 (MQ=255)

      tCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGAc                                                                                   >  2:4162251/1‑93 (MQ=255)

      tCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGAc                                                                                   <  2:4430306/93‑1 (MQ=255)

        ttAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTa                                                                                 <  1:5612324/93‑1 (MQ=255)

        ttAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTa                                                                                 >  1:2630371/1‑93 (MQ=255)

          aaGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAAc                                                                               <  1:1098590/93‑1 (MQ=255)

          aaGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAAc                                                                               <  1:1447506/93‑1 (MQ=255)

             ccTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGc                                                                            >  1:4997938/1‑93 (MQ=255)

              cTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGcc                                                                           <  1:5185995/93‑1 (MQ=255)

               tGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCt                                                                          >  2:7668528/1‑93 (MQ=255)

               tGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCt                                                                          >  1:3363748/1‑93 (MQ=255)

               tGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCt                                                                          <  1:6512025/93‑1 (MQ=255)

               tGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCt                                                                          >  2:5469966/1‑93 (MQ=255)

               tGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCt                                                                          >  1:2035201/1‑93 (MQ=255)

                   gtgtTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGaa                                                                      >  2:1562981/1‑93 (MQ=255)

                    tgtTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGaaa                                                                     >  1:351874/1‑93 (MQ=255)

                    tgtTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGaaa                                                                     <  1:3567936/93‑1 (MQ=255)

                     gtTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAac                                                                    >  2:3988684/1‑93 (MQ=255)

                       ttAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTTGCCCCAAACGGTCTAACAGCCTGGAAacac                                                                  >  2:6008933/1‑93 (MQ=255)

                       ttAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAacac                                                                  >  2:1766484/1‑93 (MQ=255)

                        tAATGAAAACGGCGGCCCCCTTAAGCGTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGGCTGGAAAcaca                                                                 >  2:2793248/1‑93 (MQ=255)

                         aaTGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAGCGGACTAGCAGCCTGGAAACACAg                                                                <  2:5821339/93‑1 (MQ=255)

                          aTGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAgg                                                               <  1:5414385/93‑1 (MQ=255)

                          aTGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAgg                                                               <  2:6169810/93‑1 (MQ=255)

                          aTGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAgg                                                               <  1:2942052/93‑1 (MQ=255)

                          aTGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAgg                                                               <  2:5260053/93‑1 (MQ=255)

                           tGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAGACGGACTAACAGCCTGGAAACACAggg                                                              >  2:1307575/1‑93 (MQ=255)

                           tGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAggg                                                              <  2:4248151/93‑1 (MQ=255)

                           tGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAggg                                                              <  2:7361845/93‑1 (MQ=255)

                           tGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCACCAAACGGACTAACAGCCTGGAAACACAggg                                                              <  2:4709503/93‑1 (MQ=255)

                            gAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAgggg                                                             >  2:4345163/1‑93 (MQ=255)

                              aaaCGCCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCt                                                           <  2:5007021/93‑1 (MQ=255)

                               aaCGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTg                                                          <  2:4356977/93‑1 (MQ=255)

                                aCGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTgg                                                         <  1:7500024/93‑1 (MQ=255)

                                   gcggcCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTc                                                      >  1:6154629/1‑93 (MQ=255)

                                     ggcCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAg                                                    >  2:2964721/1‑93 (MQ=255)

                                       cccccTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggt                                                  >  1:5786654/1‑93 (MQ=255)

                                        ccccGTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggtt                                                 <  1:4778164/93‑1 (MQ=255)

                                         cccTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttg                                                >  1:4354757/1‑93 (MQ=255)

                                         cccTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAgattg                                                >  1:1884277/1‑93 (MQ=255)

                                          ccTTAAGCTTTCTGAAATGTTGTTGTTCCGGGACTTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttgg                                               <  2:7015131/93‑1 (MQ=255)

                                           cTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttggt                                              >  1:2427876/1‑93 (MQ=255)

                                           cTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttggt                                              >  2:4632085/1‑93 (MQ=255)

                                            ttAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttggtt                                             >  1:6350516/1‑93 (MQ=255)

                                            ttAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttggtt                                             >  2:5577479/1‑93 (MQ=255)

                                            ttAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttggtt                                             >  2:3579875/1‑93 (MQ=255)

                                            ttAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttggtt                                             >  2:2286822/1‑93 (MQ=255)

                                            ttAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggttggtt                                             >  2:1869720/1‑93 (MQ=255)

                                            ttAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAggctggtt                                             >  1:2563419/1‑93 (MQ=255)

                                               aGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGGTCAGGTTGGTTAcc                                          >  2:6561442/1‑93 (MQ=255)

                                                gCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCa                                         >  2:2024738/1‑93 (MQ=255)

                                                 cTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAg                                        <  2:3761173/93‑1 (MQ=255)

                                                 cTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAg                                        <  1:1006023/93‑1 (MQ=255)

                                                 cTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAg                                        <  2:3370608/93‑1 (MQ=255)

                                                  tttCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAgg                                       <  2:887037/93‑1 (MQ=255)

                                                  tttCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAgg                                       <  2:506838/93‑1 (MQ=255)

                                                  tttCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAgg                                       <  1:1739219/93‑1 (MQ=255)

                                                  tttCTGAAATGTTGTTGTTCCGGGAATTCATGCGTAGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAgg                                       >  2:7655030/1‑93 (MQ=255)

                                                   ttatGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAggg                                      <  2:2515314/90‑1 (MQ=255)

                                                      tGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCGCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCt                                   <  2:4848294/93‑1 (MQ=255)

                                                       gAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTg                                  >  1:6359214/1‑93 (MQ=255)

                                                         aaTGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGga                                <  1:5874383/93‑1 (MQ=255)

                                                           tgttgttgtTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGgaga                              >  1:3144555/1‑93 (MQ=255)

                                                            gttgttgttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGgagga                             >  1:7760081/1‑91 (MQ=255)

                                                            gttgttgttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGaa                             >  1:1501637/1‑93 (MQ=255)

                                                               gttgttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAAt                          >  2:7289005/1‑93 (MQ=255)

                                                                ttgttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATa                         <  1:3987374/93‑1 (MQ=255)

                                                                  gttCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACa                       >  2:6473015/1‑93 (MQ=255)

                                                                    tCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATa                     <  2:3288835/93‑1 (MQ=255)

                                                                    tCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATa                     <  1:4282324/93‑1 (MQ=255)

                                                                    tCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATa                     >  1:6991305/1‑93 (MQ=255)

                                                                     ccGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATaa                    <  1:3168435/93‑1 (MQ=255)

                                                                     ccGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATaa                    <  1:215354/93‑1 (MQ=255)

                                                                     ccGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATaa                    <  1:5032832/93‑1 (MQ=255)

                                                                     ccGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATaa                    <  1:7893152/93‑1 (MQ=255)

                                                                       gggAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAaga                  <  1:7798315/93‑1 (MQ=255)

                                                                       gggAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAaga                  >  2:217550/1‑93 (MQ=255)

                                                                        ggAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAagag                 <  1:3891231/93‑1 (MQ=255)

                                                                         gAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGc                >  2:840039/1‑93 (MQ=255)

                                                                         gAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGc                <  1:1232094/93‑1 (MQ=255)

                                                                             tCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCt            <  1:2272832/93‑1 (MQ=255)

                                                                              cATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCtt           >  2:5686451/1‑93 (MQ=255)

                                                                               aTGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTg          <  1:3669762/93‑1 (MQ=255)

                                                                                tGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGc         >  1:450518/1‑93 (MQ=255)

                                                                                 gCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCa        <  1:5334325/93‑1 (MQ=255)

                                                                                 gCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCa        <  1:7555073/93‑1 (MQ=255)

                                                                                  cGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCAc       <  1:7189031/93‑1 (MQ=255)

                                                                                   gTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACt      >  1:4437493/1‑93 (MQ=255)

                                                                                   gTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACt      >  1:4896081/1‑93 (MQ=255)

                                                                                   gTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACt      <  1:4162252/93‑1 (MQ=255)

                                                                                       ccccAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCa  >  1:7622207/1‑93 (MQ=255)

                                                                                       ccccAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCa  >  1:6727665/1‑93 (MQ=255)

CCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCTAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCA  >  NC_000913/4572636‑4572815

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TAACCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCTAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGGAA  >  NC_000913/4572633‑4572819

TAACCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCC                                                                                               >  SRR4302543.4935697/1‑94 (MQ=60)

TAACCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCC                                                                                               <  SRR4302543.774831/94‑1 (MQ=60)

 AACCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCA                                                                                              <  SRR4302543.5998541/94‑1 (MQ=60)

  ACCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAA                                                                                             >  SRR4302543.7923879/1‑94 (MQ=60)

  ACCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAA                                                                                             >  SRR4302543.6169691/1‑94 (MQ=60)

  ACCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAA                                                                                             >  SRR4302543.6036735/1‑94 (MQ=60)

  ACCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGATCCGGGAATTCATGCGTCGCCCCAA                                                                                             <  SRR4302543.278881/94‑1 (MQ=60)

    CATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAAC                                                                                           <  SRR4302543.5855642/94‑1 (MQ=60)

     ATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACG                                                                                          >  SRR4302543.3447982/1‑94 (MQ=60)

      TTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGG                                                                                         >  SRR4302543.5604398/1‑94 (MQ=60)

      ATATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGG                                                                                         <  SRR4302543.6122746/94‑1 (MQ=60)

       TATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGA                                                                                        >  SRR4302543.5157538/1‑94 (MQ=60)

        ATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGAC                                                                                       <  SRR4302543.7870379/94‑1 (MQ=60)

        ATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGAC                                                                                       >  SRR4302543.7410910/1‑94 (MQ=60)

         TCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACT                                                                                      <  SRR4302543.1653969/94‑1 (MQ=60)

         TCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACT                                                                                      >  SRR4302543.1624849/1‑94 (MQ=60)

         TCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACCGACT                                                                                      >  SRR4302543.4088212/1‑94 (MQ=60)

          CTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTA                                                                                     >  SRR4302543.2654177/1‑94 (MQ=60)

          CTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTA                                                                                     >  SRR4302543.2439872/1‑94 (MQ=60)

          CTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTA                                                                                     >  SRR4302543.4580840/1‑94 (MQ=60)

           TTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAA                                                                                    <  SRR4302543.5663463/94‑1 (MQ=60)

            TAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAAC                                                                                   >  SRR4302543.4940696/1‑94 (MQ=60)

            TAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAAC                                                                                   <  SRR4302543.1690830/94‑1 (MQ=60)

             AAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACA                                                                                  <  SRR4302543.1460585/94‑1 (MQ=60)

             AAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACA                                                                                  <  SRR4302543.1108483/94‑1 (MQ=60)

             AAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACA                                                                                  >  SRR4302543.3328663/1‑94 (MQ=60)

              AGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAG                                                                                 >  SRR4302543.4187981/1‑94 (MQ=60)

               GCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGC                                                                                >  SRR4302543.5043431/1‑94 (MQ=60)

                CCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCC                                                                               >  SRR4302543.5128795/1‑94 (MQ=60)

                CCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAAAAGCC                                                                               >  SRR4302543.7748220/1‑94 (MQ=60)

                 CTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCT                                                                              >  SRR4302543.2053474/1‑94 (MQ=60)

                 CTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCT                                                                              >  SRR4302543.6416497/1‑94 (MQ=60)

                 CTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCT                                                                              >  SRR4302543.3393989/1‑94 (MQ=60)

                 CTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCT                                                                              <  SRR4302543.5232782/94‑1 (MQ=60)

                  TGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTG                                                                             >  SRR4302543.792628/1‑94 (MQ=60)

                  TGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTG                                                                             >  SRR4302543.5622320/1‑94 (MQ=60)

                  TGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTG                                                                             <  SRR4302543.6573362/94‑1 (MQ=60)

                   GAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGG                                                                            <  SRR4302543.7607671/94‑1 (MQ=60)

                    AAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGA                                                                           >  SRR4302543.3325866/1‑94 (MQ=60)

                     AGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAA                                                                          <  SRR4302543.4696770/94‑1 (MQ=60)

                      GTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAA                                                                         >  SRR4302543.355125/1‑94 (MQ=60)

                       TGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAAC                                                                        <  SRR4302543.3599490/94‑1 (MQ=60)

                        GTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACA                                                                       >  SRR4302543.2888341/1‑94 (MQ=60)

                         TTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACAC                                                                      <  SRR4302543.3927464/94‑1 (MQ=60)

                          TTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACA                                                                     <  SRR4302543.1801414/94‑1 (MQ=60)

                          TTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACA                                                                     <  SRR4302543.1731052/94‑1 (MQ=60)

                           TAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAG                                                                    >  SRR4302543.7398779/1‑94 (MQ=60)

                           TAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAG                                                                    <  SRR4302543.5185761/94‑1 (MQ=60)

                           TAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAG                                                                    <  SRR4302543.4017550/94‑1 (MQ=60)

                           TAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGACCCAAACGGACTAACCGCCTGGGAACACAG                                                                    >  SRR4302543.356740/1‑94 (MQ=60)

                            AATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGG                                                                   <  SRR4302543.986464/94‑1 (MQ=60)

                            AATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGG                                                                   >  SRR4302543.3673055/1‑94 (MQ=60)

                             ATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGG                                                                  <  SRR4302543.5463645/94‑1 (MQ=60)

                             ATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGG                                                                  >  SRR4302543.4413151/1‑94 (MQ=60)

                             ATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGG                                                                  <  SRR4302543.2968766/94‑1 (MQ=60)

                             ATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGG                                                                  >  SRR4302543.2037030/1‑94 (MQ=60)

                             ATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGG                                                                  <  SRR4302543.259223/94‑1 (MQ=60)

                             ATGAAAACGGCGGCCCCCTTAAGCTTGCTGAAAGTTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGG                                                                  <  SRR4302543.7678712/94‑1 (MQ=60)

                              TGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGG                                                                 >  SRR4302543.2117326/1‑94 (MQ=60)

                                AAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCT                                                               >  SRR4302543.3734690/1‑94 (MQ=60)

                                AAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCT                                                               <  SRR4302543.7583545/94‑1 (MQ=60)

                                 AAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTG                                                              <  SRR4302543.748779/94‑1 (MQ=60)

                                   ACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGT                                                            <  SRR4302543.7571744/94‑1 (MQ=60)

                                   ACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGT                                                            <  SRR4302543.7571743/94‑1 (MQ=60)

                                    CGGCGGCACCCTTAAGCTTTCTCAAATGTTCTTGTTCCGCGAACTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTT                                                           <  SRR4302543.1630697/94‑1 (MQ=60)

                                     GGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTC                                                          >  SRR4302543.6212889/1‑94 (MQ=60)

                                     GGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTC                                                          >  SRR4302543.3011552/1‑94 (MQ=60)

                                     GGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTC                                                          <  SRR4302543.1828657/94‑1 (MQ=60)

                                      GCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCA                                                         <  SRR4302543.3566223/94‑1 (MQ=60)

                                        GGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGG                                                       >  SRR4302543.6967677/1‑94 (MQ=60)

                                        GGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTACGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGG                                                       >  SRR4302543.6691976/1‑94 (MQ=60)

                                         GCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGT                                                      >  SRR4302543.3588762/1‑94 (MQ=60)

                                         GCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGT                                                      >  SRR4302543.5839308/1‑94 (MQ=60)

                                           CCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTG                                                    >  SRR4302543.4394219/1‑94 (MQ=60)

                                           CCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTG                                                    >  SRR4302543.6840116/1‑94 (MQ=60)

                                           CCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTG                                                    >  SRR4302543.6536334/1‑94 (MQ=60)

                                           CCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGATTG                                                    >  SRR4302543.1901212/1‑94 (MQ=60)

                                           CCCCGTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTG                                                    <  SRR4302543.4821835/94‑1 (MQ=60)

                                            CCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGG                                                   <  SRR4302543.2162595/94‑1 (MQ=60)

                                             CCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGT                                                  <  SRR4302543.1201511/94‑1 (MQ=60)

                                             CCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGT                                                  >  SRR4302543.2449788/1‑94 (MQ=60)

                                             CCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGT                                                  <  SRR4302543.5061313/94‑1 (MQ=60)

                                              CTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTT                                                 >  SRR4302543.6410229/1‑94 (MQ=60)

                                              CTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGCTGGTT                                                 >  SRR4302543.2586838/1‑94 (MQ=60)

                                               TTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTA                                                <  SRR4302543.2746925/94‑1 (MQ=60)

                                                 AAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACC                                              <  SRR4302543.14919/94‑1 (MQ=60)

                                                 AAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACC                                              >  SRR4302543.5935210/1‑94 (MQ=60)

                                                   GCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAG                                            <  SRR4302543.4305362/94‑1 (MQ=60)

                                                    CTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGG                                           <  SRR4302543.1014923/94‑1 (MQ=60)

                                                    CTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGG                                           >  SRR4302543.5950994/1‑94 (MQ=60)

                                                    CTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGG                                           <  SRR4302543.288495/94‑1 (MQ=60)

                                                    CTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGG                                           >  SRR4302543.499386/1‑94 (MQ=60)

                                                    CTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGG                                           <  SRR4302543.3792923/94‑1 (MQ=60)

                                                    CTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGGCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGG                                           <  SRR4302543.139001/94‑1 (MQ=60)

                                                     TTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCGGGTTGGTTACCAGGG                                          >  SRR4302543.4160882/1‑94 (MQ=60)

                                                     TTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGG                                          >  SRR4302543.2640557/1‑94 (MQ=60)

                                                     TTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGG                                          <  SRR4302543.1754728/94‑1 (MQ=60)

                                                     TTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGG                                          <  SRR4302543.4936645/94‑1 (MQ=60)

                                                       TCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGC                                        >  SRR4302543.6624784/1‑94 (MQ=60)

                                                       TCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGC                                        <  SRR4302543.6085146/94‑1 (MQ=60)

                                                        CTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCT                                       >  SRR4302543.5512448/1‑94 (MQ=60)

                                                        CTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCT                                       >  SRR4302543.53895/1‑94 (MQ=60)

                                                        CTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCT                                       <  SRR4302543.5242092/94‑1 (MQ=60)

                                                         TGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTG                                      >  SRR4302543.6419008/1‑94 (MQ=60)

                                                         TGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTG                                      >  SRR4302543.4337803/1‑94 (MQ=60)

                                                          GAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGG                                     <  SRR4302543.4437028/94‑1 (MQ=60)

                                                           AAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGA                                    <  SRR4302543.2316004/94‑1 (MQ=60)

                                                           AAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGA                                    >  SRR4302543.520431/1‑94 (MQ=60)

                                                            AATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAG                                   <  SRR4302543.5628252/94‑1 (MQ=60)

                                                            AATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAG                                   <  SRR4302543.5594314/94‑1 (MQ=60)

                                                            AATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAG                                   <  SRR4302543.1117160/94‑1 (MQ=60)

                                                            AATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAG                                   <  SRR4302543.5927899/94‑1 (MQ=60)

                                                            AATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAG                                   <  SRR4302543.6393082/94‑1 (MQ=60)

                                                             ATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGA                                  >  SRR4302543.3172839/1‑94 (MQ=60)

                                                             ATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGA                                  >  SRR4302543.2578000/1‑94 (MQ=60)

                                                             ATGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGA                                  >  SRR4302543.1918662/1‑94 (MQ=60)

                                                              TGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGGA                                 >  SRR4302543.7833313/1‑94 (MQ=60)

                                                              TGTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAA                                 >  SRR4302543.1515135/1‑94 (MQ=60)

                                                               GTTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGGAA                                >  SRR4302543.1004336/1‑94 (MQ=60)

                                                                TTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGGCTAACAGCCTGGAAACACAGGGGCTGGGTCAGGTTGGTTACCAGGGGCTGGAGAAAA                               >  SRR4302543.1369326/1‑94 (MQ=60)

                                                                TTGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAA                               <  SRR4302543.3600495/94‑1 (MQ=60)

                                                                 TGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGGGAAAAA                              >  SRR4302543.4542872/1‑94 (MQ=60)

                                                                 TGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAAT                              >  SRR4302543.7867970/1‑94 (MQ=60)

                                                                 TGTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAAT                              <  SRR4302543.1547233/94‑1 (MQ=60)

                                                                  GTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATA                             <  SRR4302543.7074062/94‑1 (MQ=60)

                                                                  GTTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATA                             >  SRR4302543.6467919/1‑94 (MQ=60)

                                                                   TTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATAC                            <  SRR4302543.4022799/94‑1 (MQ=60)

                                                                   TTGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATAC                            <  SRR4302543.5113977/94‑1 (MQ=60)

                                                                    TGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACA                           >  SRR4302543.5770355/1‑94 (MQ=60)

                                                                    TGTTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACA                           <  SRR4302543.3191657/94‑1 (MQ=60)

                                                                      TTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATA                         >  SRR4302543.7057104/1‑94 (MQ=60)

                                                                      TTCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGGTGGTTACCAGGGGCTGGAGGAAATACATA                         >  SRR4302543.3007652/1‑94 (MQ=60)

                                                                       TCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAA                        <  SRR4302543.5844383/94‑1 (MQ=60)

                                                                       TCCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAA                        <  SRR4302543.4321248/94‑1 (MQ=60)

                                                                        CCGGGAGTTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGTCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAG                       <  SRR4302543.2288136/94‑1 (MQ=60)

                                                                        CCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAG                       <  SRR4302543.3196963/94‑1 (MQ=60)

                                                                        CCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAG                       <  SRR4302543.5078614/94‑1 (MQ=60)

                                                                        CCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAG                       <  SRR4302543.3196962/94‑1 (MQ=60)

                                                                        CCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAG                       <  SRR4302543.5078615/94‑1 (MQ=60)

                                                                        CCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAG                       >  SRR4302543.5007871/1‑94 (MQ=60)

                                                                        CCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAG                       <  SRR4302543.7967377/94‑1 (MQ=60)

                                                                        CCGGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAG                       <  SRR4302543.217201/94‑1 (MQ=60)

                                                                          GGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAG                     <  SRR4302543.436599/94‑1 (MQ=60)

                                                                          GGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAG                     <  SRR4302543.1051983/94‑1 (MQ=60)

                                                                          GGGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAG                     <  SRR4302543.7871803/94‑1 (MQ=60)

                                                                           GGAATTCATGCGTCGCCCCAAACTGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGC                    <  SRR4302543.5142469/94‑1 (MQ=60)

                                                                           GGAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGC                    <  SRR4302543.3925587/94‑1 (MQ=60)

                                                                            GAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACTCAGGTGCTGGTTCAGGGTGGTTTCCAGGGGCTGGAGAAAATACATAAGAGCC                   <  SRR4302543.3454486/94‑1 (MQ=60)

                                                                            GAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCC                   <  SRR4302543.2243028/94‑1 (MQ=60)

                                                                            GAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCC                   >  SRR4302543.7295937/1‑94 (MQ=60)

                                                                            GAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCC                   <  SRR4302543.7923162/94‑1 (MQ=60)

                                                                            GAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCC                   <  SRR4302543.1243187/94‑1 (MQ=60)

                                                                            GAATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCC                   <  SRR4302543.5634066/94‑1 (MQ=60)

                                                                              ATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCC                 <  SRR4302543.4288680/94‑1 (MQ=60)

                                                                              ATTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCC                 >  SRR4302543.1107008/1‑94 (MQ=60)

                                                                               TTCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCT                <  SRR4302543.6284991/94‑1 (MQ=60)

                                                                                TCATGCGTCGCCCCAAACGGACTAACGGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTT               <  SRR4302543.5440028/94‑1 (MQ=60)

                                                                                TCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTT               <  SRR4302543.2293608/94‑1 (MQ=60)

                                                                                TCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTT               >  SRR4302543.4531942/1‑94 (MQ=60)

                                                                                TCATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTT               <  SRR4302543.2293385/94‑1 (MQ=60)

                                                                                 CATGCGTCGCCCCAAACGGACTATCAGTCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTG              <  SRR4302543.5345518/94‑1 (MQ=60)

                                                                                 CATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTG              >  SRR4302543.6144597/1‑94 (MQ=60)

                                                                                 CATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTG              >  SRR4302543.5771889/1‑94 (MQ=60)

                                                                                  ATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGC             >  SRR4302543.454727/1‑94 (MQ=60)

                                                                                  ATGCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGC             <  SRR4302543.3701982/94‑1 (MQ=60)

                                                                                    GCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCAC           <  SRR4302543.7627014/94‑1 (MQ=60)

                                                                                    GCGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCAC           <  SRR4302543.5382565/94‑1 (MQ=60)

                                                                                     CGTCGCCCCAAACGGACTAACAGCCTGGAGAGACGGGGGCTCGTTCAGGTTCGTTGCTAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACT          <  SRR4302543.1139332/94‑1 (MQ=60)

                                                                                     CGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACT          <  SRR4302543.7258765/94‑1 (MQ=60)

                                                                                     CGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACT          <  SRR4302543.750301/94‑1 (MQ=60)

                                                                                     CGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACT          >  SRR4302543.4477681/1‑94 (MQ=60)

                                                                                     CGTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACT          >  SRR4302543.4940713/1‑94 (MQ=60)

                                                                                      GTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTG         >  SRR4302543.777792/1‑94 (MQ=60)

                                                                                      GTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTG         <  SRR4302543.2475500/94‑1 (MQ=60)

                                                                                      GTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTG         <  SRR4302543.4199930/94‑1 (MQ=60)

                                                                                      GTCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTG         <  SRR4302543.7651995/94‑1 (MQ=60)

                                                                                       TCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGG        >  SRR4302543.7162076/1‑94 (MQ=60)

                                                                                       TCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGG        <  SRR4302543.1498639/94‑1 (MQ=60)

                                                                                       TCGCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGG        <  SRR4302543.6068013/94‑1 (MQ=60)

                                                                                       TCGCCACAAACGGACTAACAGCCTGGAAACACAGGGGCTGTTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGG        <  SRR4302543.6068014/94‑1 (MQ=60)

                                                                                         GCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCA      >  SRR4302543.7694544/1‑94 (MQ=60)

                                                                                         GCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCA      >  SRR4302543.6791228/1‑94 (MQ=60)

                                                                                         GCCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCA      <  SRR4302543.6744768/94‑1 (MQ=60)

                                                                                          CCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAG     <  SRR4302543.6416042/94‑1 (MQ=60)

                                                                                          CCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAG     >  SRR4302543.7717345/1‑94 (MQ=60)

                                                                                          CCCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAG     >  SRR4302543.7441709/1‑94 (MQ=60)

                                                                                           CCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGG    >  SRR4302543.1212774/1‑94 (MQ=60)

                                                                                           CCCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGG    <  SRR4302543.2662627/94‑1 (MQ=60)

                                                                                            CCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGGAAATACATAAGAGGCCCTTGCACTGGCAGGA   >  SRR4302543.5433445/1‑94 (MQ=60)

                                                                                            CCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGGA   >  SRR4302543.5226105/1‑94 (MQ=60)

                                                                                            CCAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGGA   >  SRR4302543.3784889/1‑94 (MQ=60)

                                                                                             CAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGGAA  >  SRR4302543.1083748/1‑94 (MQ=60)

TAACCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCTAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGGAA  >  NC_000913/4572633‑4572819

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 5 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`