Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,619,453 |
T→G |
V39G (GTG→GGG) |
yjjJ → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,619,453 | 0 | T | G | 100.0%
| 518.4
/ NA
| 163 | V39G (GTG→GGG) | yjjJ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (78/85); total (78/85) |
Only 100 of 167 total aligned reads displayed.
TGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACG > NC_000913/4619363‑4619542
|
tGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGa < 1:4197960/93‑1 (MQ=255)
gCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGAt > 2:2646335/1‑93 (MQ=255)
gCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGAt < 1:2100838/93‑1 (MQ=255)
aaGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGAttt > 2:2661724/1‑92 (MQ=255)
aaGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTc > 1:1137521/1‑93 (MQ=255)
gggCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGc > 1:4034710/1‑93 (MQ=255)
gCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCtt > 1:4114872/1‑93 (MQ=255)
ccGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCttt < 1:1664655/93‑1 (MQ=255)
ccGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCttt < 2:623534/93‑1 (MQ=255)
cgcgTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTg > 2:2284082/1‑93 (MQ=255)
gcgTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTgg > 1:1148555/1‑93 (MQ=255)
gcgTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTgg < 2:3499478/93‑1 (MQ=255)
gTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCCTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTa > 1:28183/1‑93 (MQ=255)
ttCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTaa > 2:238687/1‑93 (MQ=255)
tctcCCCCGGAATTGCGCCAGCGTCTGTCAATCAGTCAGTCTACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTaaa < 1:559768/93‑1 (MQ=255)
tCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTaaa < 1:3039485/93‑1 (MQ=255)
tGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGc < 2:2934771/93‑1 (MQ=255)
gCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCa < 2:3763201/93‑1 (MQ=255)
ccccGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCAc < 1:3352951/93‑1 (MQ=255)
ccccGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCAc > 2:3659842/1‑93 (MQ=255)
cccGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACg > 2:1035757/1‑93 (MQ=255)
cccGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACg > 2:1541279/1‑93 (MQ=255)
cccGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACg < 2:3315465/93‑1 (MQ=255)
cccGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACg > 1:1478111/1‑93 (MQ=255)
ccGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACgg > 2:4284280/1‑93 (MQ=255)
cGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACggg < 2:2360370/93‑1 (MQ=255)
gAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCa > 1:1022747/1‑93 (MQ=255)
aTTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAAc < 1:2008124/93‑1 (MQ=255)
aTTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAAc > 1:1513913/1‑93 (MQ=255)
aTTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTAGCTTTGGTAAAGCACGGGCAAc > 2:2100072/1‑93 (MQ=255)
tGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAAcgc < 1:4095623/93‑1 (MQ=255)
tGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAAcgc < 2:1308328/93‑1 (MQ=255)
cgcCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGa < 2:1780758/93‑1 (MQ=255)
cgcCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTCGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGa < 2:164001/93‑1 (MQ=255)
ccAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGata < 2:407241/93‑1 (MQ=255)
ccAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGata > 1:694399/1‑93 (MQ=255)
ccAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGata < 1:3725099/93‑1 (MQ=255)
ccAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGata < 2:1846448/93‑1 (MQ=255)
ccAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGata > 1:2255089/1‑93 (MQ=255)
ccAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGata < 1:156541/93‑1 (MQ=255)
cAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGatat > 2:3373781/1‑93 (MQ=255)
cAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGatat > 1:618435/1‑93 (MQ=255)
cAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGatat > 1:3866465/1‑93 (MQ=255)
cAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGATGCCAGAGAAGATCGGGGGATTCGGCTTGGTAAAGCACGGGCACAGCGatat > 2:315530/1‑93 (MQ=255)
aGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATg < 1:3412219/93‑1 (MQ=255)
gCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGc > 1:4387305/1‑93 (MQ=255)
gCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGc < 2:1870427/93‑1 (MQ=255)
gCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGc > 1:3390389/1‑93 (MQ=255)
gTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCAc < 2:790642/93‑1 (MQ=255)
gTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCAc < 2:1322439/93‑1 (MQ=255)
tGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCActgc > 1:3464262/1‑93 (MQ=255)
tGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCActgc < 1:2523403/93‑1 (MQ=255)
ggCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCActgct < 2:1590383/93‑1 (MQ=255)
ggCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCActgct > 1:3077563/1‑93 (MQ=255)
gCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCActgctg < 2:4528392/93‑1 (MQ=255)
aTCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGt > 2:2701336/1‑93 (MQ=255)
cagtcagGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTcc < 2:282058/93‑1 (MQ=255)
agtcagGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCt < 2:1978095/93‑1 (MQ=255)
gtcagGCGACGTTCTCACGCCTTGTTGCCAGAGCAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCtt > 1:3191965/1‑93 (MQ=255)
gtcagGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCtt < 2:881159/93‑1 (MQ=255)
agGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATc < 2:1311906/93‑1 (MQ=255)
ggCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATcg > 2:3767264/1‑93 (MQ=255)
gACGTGCACACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCgg < 1:4320835/93‑1 (MQ=255)
aCGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGa > 2:4202442/1‑93 (MQ=255)
cGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGaa < 2:2166206/93‑1 (MQ=255)
gTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAAt > 1:4030866/1‑93 (MQ=255)
gTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAAt < 1:2630259/93‑1 (MQ=255)
ttCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAAtt > 1:452020/1‑93 (MQ=255)
ttCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAAtt > 1:4002903/1‑93 (MQ=255)
ctcACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGa > 1:3675959/1‑93 (MQ=255)
ctcACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGa < 2:145831/93‑1 (MQ=255)
tcACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAg < 1:2510/93‑1 (MQ=255)
cACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGc < 1:3928632/93‑1 (MQ=255)
cGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGt > 1:3825140/1‑93 (MQ=255)
ccTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTAt < 2:245339/93‑1 (MQ=255)
ccTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTAt > 2:675754/1‑93 (MQ=255)
cTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTAtt > 2:4360121/1‑93 (MQ=255)
cTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTAtt > 1:4475016/1‑93 (MQ=255)
cTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTAtt < 2:343862/93‑1 (MQ=255)
cTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTAtt > 1:4283731/1‑93 (MQ=255)
cTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTAtc > 1:4503197/1‑92 (MQ=255)
ttgttgCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTc < 2:3979328/93‑1 (MQ=255)
gttgCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTccc < 2:4126207/93‑1 (MQ=255)
ttgCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCg < 1:181637/93‑1 (MQ=255)
gCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTc > 2:1946898/1‑93 (MQ=255)
gCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTc > 1:18678/1‑93 (MQ=255)
gCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTc < 1:3847255/93‑1 (MQ=255)
cAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTg < 1:142776/93‑1 (MQ=255)
gagaAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGc < 1:4479332/93‑1 (MQ=255)
agaagaTCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCg > 2:2406761/1‑93 (MQ=255)
gaagaTCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCgg > 1:1660133/1‑93 (MQ=255)
aagaTCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCggg > 1:1802929/1‑93 (MQ=255)
aagaTCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCggg > 2:1001964/1‑93 (MQ=255)
agaTCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGt < 2:1391399/93‑1 (MQ=255)
agaTCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGt < 2:2270203/93‑1 (MQ=255)
agaTCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGt < 1:1497031/93‑1 (MQ=255)
aTCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTgg > 1:2830578/1‑93 (MQ=255)
tCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGa < 2:3050061/93‑1 (MQ=255)
cGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGAc < 1:1360180/93‑1 (MQ=255)
cGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGAc < 1:2193032/93‑1 (MQ=255)
|
TGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACG > NC_000913/4619363‑4619542
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATA > NC_000913/4619360‑4619545
|
TACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGG < SRR4302535.4585638/94‑1 (MQ=60)
ACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGG < SRR4302535.2311911/94‑1 (MQ=60)
TGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGAT < SRR4302535.1153254/94‑1 (MQ=60)
TGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGAT > SRR4302535.157902/1‑94 (MQ=60)
TGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGAT < SRR4302535.4226686/94‑1 (MQ=60)
GCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATT < SRR4302535.2115986/94‑1 (MQ=60)
GCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATT < SRR4302535.2115987/94‑1 (MQ=60)
CAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTC > SRR4302535.1145634/1‑94 (MQ=60)
CAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTC > SRR4302535.407316/1‑94 (MQ=60)
CAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTC < SRR4302535.4400613/94‑1 (MQ=60)
AGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGC > SRR4302535.4062331/1‑94 (MQ=60)
AGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGC < SRR4302535.3907342/94‑1 (MQ=60)
GGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTT > SRR4302535.4143039/1‑94 (MQ=60)
CCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTG < SRR4302535.1676685/94‑1 (MQ=60)
CGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGG > SRR4302535.1156736/1‑94 (MQ=60)
CGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCCTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTA > SRR4302535.28405/1‑94 (MQ=60)
GTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAA > SRR4302535.3285788/1‑94 (MQ=60)
GTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAA > SRR4302535.4444331/1‑94 (MQ=60)
GTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAA > SRR4302535.2902335/1‑94 (MQ=60)
TCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAG < SRR4302535.3060772/94‑1 (MQ=60)
TCTCCCCCGGAATTGCGCCAGCGTCTGTCAATCAGTCAGTCTACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAG < SRR4302535.563683/94‑1 (MQ=60)
GCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCAC < SRR4302535.3480059/94‑1 (MQ=60)
CCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACG < SRR4302535.3376301/94‑1 (MQ=60)
CCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACG > SRR4302535.1488687/1‑94 (MQ=60)
CGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGC > SRR4302535.1461446/1‑94 (MQ=60)
GGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCA > SRR4302535.1030012/1‑94 (MQ=60)
AATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAAC > SRR4302535.4515788/1‑94 (MQ=60)
AATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAAC < SRR4302535.579057/94‑1 (MQ=60)
AATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAAC > SRR4302535.1524818/1‑94 (MQ=60)
AATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAAC < SRR4302535.3807379/94‑1 (MQ=60)
ATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACG < SRR4302535.2022587/94‑1 (MQ=60)
TGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCG < SRR4302535.4123655/94‑1 (MQ=60)
GCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATA > SRR4302535.699270/1‑94 (MQ=60)
GCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATA < SRR4302535.1718475/94‑1 (MQ=60)
GCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATA > SRR4302535.2271143/1‑94 (MQ=60)
CCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATAT > SRR4302535.3893053/1‑94 (MQ=60)
CCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATAT < SRR4302535.3750907/94‑1 (MQ=60)
CCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATAT > SRR4302535.622733/1‑94 (MQ=60)
CCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATAT < SRR4302535.157648/94‑1 (MQ=60)
AGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGC < SRR4302535.3435962/94‑1 (MQ=60)
AGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGC > SRR4302535.3413976/1‑94 (MQ=60)
AGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGC > SRR4302535.4417316/1‑94 (MQ=60)
AGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGC > SRR4302535.3082741/1‑94 (MQ=60)
CTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGC > SRR4302535.3488340/1‑94 (MQ=60)
TGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCT > SRR4302535.3099032/1‑94 (MQ=60)
TGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCT < SRR4302535.2541588/94‑1 (MQ=60)
AGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGCAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTT > SRR4302535.3214046/1‑94 (MQ=60)
GTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTA < SRR4302535.1825219/94‑1 (MQ=60)
TCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTAT < SRR4302535.2599916/94‑1 (MQ=60)
GGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGC < SRR4302535.1496162/94‑1 (MQ=60)
GACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGA > SRR4302535.2687966/1‑94 (MQ=60)
GACGTGCACACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGA < SRR4302535.4350391/94‑1 (MQ=60)
CGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAAT > SRR4302535.4058442/1‑94 (MQ=60)
GTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATT < SRR4302535.2649102/94‑1 (MQ=60)
GTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATT > SRR4302535.1350087/1‑94 (MQ=60)
GTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATT > SRR4302535.455186/1‑94 (MQ=60)
GTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATT < SRR4302535.4195102/94‑1 (MQ=60)
GTTCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATT > SRR4302535.4030282/1‑94 (MQ=60)
TCTCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGA > SRR4302535.3701410/1‑94 (MQ=60)
TCACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGC < SRR4302535.2532/94‑1 (MQ=60)
CACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCG > SRR4302535.3649780/1‑94 (MQ=60)
CACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCG < SRR4302535.3955467/94‑1 (MQ=60)
ACGCCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGT > SRR4302535.3851526/1‑94 (MQ=60)
CCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATT < SRR4302535.2363849/94‑1 (MQ=60)
CCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATT > SRR4302535.4505722/1‑94 (MQ=60)
CCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATT > SRR4302535.4226896/1‑94 (MQ=60)
CCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATT > SRR4302535.4313037/1‑94 (MQ=60)
CCTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATC > SRR4302535.4534117/1‑94 (MQ=60)
CTTGTTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTC > SRR4302535.3865774/1‑94 (MQ=60)
TTGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGT < SRR4302535.182895/94‑1 (MQ=60)
TGCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTC > SRR4302535.18817/1‑94 (MQ=60)
GCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCT < SRR4302535.3873739/94‑1 (MQ=60)
GCCAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCT < SRR4302535.1544705/94‑1 (MQ=60)
CAGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGG < SRR4302535.143772/94‑1 (MQ=60)
AGAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGC > SRR4302535.2267486/1‑94 (MQ=60)
GAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCG < SRR4302535.4510084/94‑1 (MQ=60)
GAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCG > SRR4302535.1896397/1‑94 (MQ=60)
GAGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCG < SRR4302535.4027005/94‑1 (MQ=60)
AGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGG > SRR4302535.1672131/1‑94 (MQ=60)
AGAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGG > SRR4302535.4538186/1‑94 (MQ=60)
GAAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGG > SRR4302535.1815961/1‑94 (MQ=60)
AAGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGT < SRR4302535.4059970/94‑1 (MQ=60)
AGATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTG < SRR4302535.1507797/94‑1 (MQ=60)
GATCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGG > SRR4302535.2850668/1‑94 (MQ=60)
TCGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGAC < SRR4302535.337879/94‑1 (MQ=60)
CGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACG < SRR4302535.1369908/94‑1 (MQ=60)
CGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACG < SRR4302535.2208661/94‑1 (MQ=60)
CGGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACG > SRR4302535.673104/1‑94 (MQ=60)
GGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGA > SRR4302535.491687/1‑94 (MQ=60)
GGGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGA > SRR4302535.1542732/1‑94 (MQ=60)
GGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGAT < SRR4302535.1780035/94‑1 (MQ=60)
GGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGAT < SRR4302535.12313/94‑1 (MQ=60)
GGGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGAT < SRR4302535.4030822/94‑1 (MQ=60)
GGGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATA < SRR4302535.564509/94‑1 (MQ=60)
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TACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATA > NC_000913/4619360‑4619545
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
