Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 1873 183.1 9376148 98.2% 9207377 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCA  >  NC_000913/3620126‑3620311
                                                                                             |                                                                                            
CTGGAAATTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGG                                                                                              <  SRR4302535.1225135/94‑1 (MQ=0)
CTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGG                                                                                              >  SRR4302535.447656/1‑94 (MQ=0)
 TGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGT                                                                                             <  SRR4302535.1529434/94‑1 (MQ=0)
    AAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGA                                                                                          <  SRR4302535.2978789/94‑1 (MQ=0)
    AAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGA                                                                                          >  SRR4302535.59530/1‑94 (MQ=0)
      AGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACC                                                                                        <  SRR4302535.2880809/94‑1 (MQ=0)
      AGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACC                                                                                        <  SRR4302535.4649712/94‑1 (MQ=0)
        TGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCG                                                                                      >  SRR4302535.3474703/1‑94 (MQ=0)
           AATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTG                                                                                   <  SRR4302535.4514189/94‑1 (MQ=0)
              CCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTAC                                                                                >  SRR4302535.3654467/1‑94 (MQ=0)
                      ACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGC                                                                        >  SRR4302535.2262058/1‑94 (MQ=0)
                       CCGGTTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCG                                                                       <  SRR4302535.803316/94‑1 (MQ=0)
                                   GGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCAC                                                           >  SRR4302535.876416/1‑94 (MQ=0)
                                   GGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCAC                                                           <  SRR4302535.389603/94‑1 (MQ=0)
                                     AAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCT                                                         <  SRR4302535.2482402/94‑1 (MQ=0)
                                      AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTG                                                        >  SRR4302535.2908812/1‑94 (MQ=0)
                                          CGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACC                                                    >  SRR4302535.4636595/1‑94 (MQ=0)
                                          CGCCGCTGGCTGGCATCGTGCGGCATGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACC                                                    <  SRR4302535.1259561/94‑1 (MQ=0)
                                            CCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCAC                                                  <  SRR4302535.448730/94‑1 (MQ=0)
                                             CGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACT                                                 >  SRR4302535.1543990/1‑94 (MQ=0)
                                                    TGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCA                                          >  SRR4302535.100219/1‑94 (MQ=0)
                                                    TGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCA                                          >  SRR4302535.3631882/1‑94 (MQ=0)
                                                     GGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCAT                                         <  SRR4302535.949463/94‑1 (MQ=0)
                                                      GCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATC                                        <  SRR4302535.4263989/94‑1 (MQ=0)
                                                      GCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATC                                        <  SRR4302535.3003496/94‑1 (MQ=0)
                                                        ATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGC                                      >  SRR4302535.816706/1‑94 (MQ=0)
                                                           GTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGC                                   <  SRR4302535.2238655/94‑1 (MQ=0)
                                                              CGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTG                                >  SRR4302535.1552126/1‑94 (MQ=0)
                                                              CGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTG                                >  SRR4302535.3088093/1‑94 (MQ=0)
                                                                GCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCC                              <  SRR4302535.795749/94‑1 (MQ=0)
                                                                 CCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACGCGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCG                             >  SRR4302535.3317484/1‑94 (MQ=0)
                                                                 CCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCG                             >  SRR4302535.4527239/1‑94 (MQ=0)
                                                                 CCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCG                             >  SRR4302535.4556208/1‑94 (MQ=0)
                                                                   TGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCT                           >  SRR4302535.3762006/1‑94 (MQ=0)
                                                                   TGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCT                           >  SRR4302535.2783619/1‑94 (MQ=0)
                                                                   TGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCT                           >  SRR4302535.143241/1‑94 (MQ=0)
                                                                    GACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTG                          <  SRR4302535.790695/94‑1 (MQ=0)
                                                                    GACCGTGAAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTG                          <  SRR4302535.1421168/94‑1 (MQ=0)
                                                                     ACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGG                         <  SRR4302535.3205912/94‑1 (MQ=0)
                                                                       CGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCG                       <  SRR4302535.1427912/94‑1 (MQ=0)
                                                                       CGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCG                       <  SRR4302535.3823413/94‑1 (MQ=0)
                                                                         TGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCT                     >  SRR4302535.2194227/1‑94 (MQ=3)
                                                                          GGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTC                    >  SRR4302535.1116982/1‑94 (MQ=5)
                                                                          GGAGCAGATGAAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTT                    <  SRR4302535.2501804/94‑1 (MQ=3)
                                                                            AGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCCCCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCAT                  <  SRR4302535.846868/94‑1 (MQ=11)
                                                                            AGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCAT                  >  SRR4302535.4513709/1‑94 (MQ=12)
                                                                            AGCAGATGAAAAACCAGGTGGACCCGGTGTACACGACGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCAT                  >  SRR4302535.3385554/1‑94 (MQ=11)
                                                                             GCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATC                 <  SRR4302535.3021031/94‑1 (MQ=15)
                                                                             GCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATC                 >  SRR4302535.3687848/1‑94 (MQ=15)
                                                                             GCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATC                 >  SRR4302535.680741/1‑94 (MQ=15)
                                                                              CAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGACCTGCCGCTGGCGCTCATCA                >  SRR4302535.3417031/1‑94 (MQ=0)
                                                                              CAGATGAAAAACCAGGTGGACCCGGTGTCCACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCA                <  SRR4302535.2763349/94‑1 (MQ=19)
                                                                              CAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCA                <  SRR4302535.11255/94‑1 (MQ=20)
                                                                              CAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCA                <  SRR4302535.3751500/94‑1 (MQ=20)
                                                                              CAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCA                <  SRR4302535.3176637/94‑1 (MQ=20)
                                                                              CAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCA                <  SRR4302535.1086892/94‑1 (MQ=20)
                                                                               ATATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG               <  SRR4302535.4265238/94‑1 (MQ=22)
                                                                               AGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG               >  SRR4302535.147752/1‑94 (MQ=0)
                                                                               AGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG               <  SRR4302535.3677847/94‑1 (MQ=0)
                                                                               AGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG               >  SRR4302535.3524612/1‑94 (MQ=23)
                                                                               AGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG               >  SRR4302535.2736293/1‑94 (MQ=23)
                                                                               AGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG               >  SRR4302535.561919/1‑94 (MQ=23)
                                                                               AGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG               <  SRR4302535.3078554/94‑1 (MQ=23)
                                                                                GATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGC              >  SRR4302535.2502961/1‑94 (MQ=25)
                                                                                GATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGC              <  SRR4302535.4093055/94‑1 (MQ=25)
                                                                                 ATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCA             >  SRR4302535.906155/1‑94 (MQ=5)
                                                                                 ATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCA             >  SRR4302535.1743401/1‑94 (MQ=25)
                                                                                 ATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCA             <  SRR4302535.3300244/94‑1 (MQ=25)
                                                                                  TGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCCCCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAC            <  SRR4302535.4487537/94‑1 (MQ=12)
                                                                                  TGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAC            <  SRR4302535.1341895/94‑1 (MQ=28)
                                                                                   GCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACG           <  SRR4302535.2208623/94‑1 (MQ=21)
                                                                                   GAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACG           <  SRR4302535.3123454/94‑1 (MQ=30)
                                                                                   AAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACG           <  SRR4302535.1406367/94‑1 (MQ=27)
                                                                                    CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTCCCACTGCGCCCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGG          <  SRR4302535.641270/94‑1 (MQ=21)
                                                                                    CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGG          >  SRR4302535.3093810/1‑94 (MQ=23)
                                                                                     AAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGA         >  SRR4302535.2909995/1‑94 (MQ=25)
                                                                                     AAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAACACGGA         >  SRR4302535.3107274/1‑94 (MQ=15)
                                                                                      AAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAA        <  SRR4302535.115914/94‑1 (MQ=25)
                                                                                      AAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAA        >  SRR4302535.2660523/1‑94 (MQ=26)
                                                                                       AACCAGAGGGCCCCGGTGTCCCCGCCGCCGCGAAAAATCCCCCTGTCCCCCTGCGCCCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG       <  SRR4302535.166361/94‑1 (MQ=18)
                                                                                        ACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGG      <  SRR4302535.4107236/94‑1 (MQ=25)
                                                                                        ACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGG      >  SRR4302535.4215956/1‑94 (MQ=25)
                                                                                        ACCAGATGGACCGGGTGTACACGCCGCCGCAAAAAATCCCCCTGTACCACGGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGG      <  SRR4302535.3334480/94‑1 (MQ=21)
                                                                                        ACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGG      <  SRR4302535.1778922/94‑1 (MQ=26)
                                                                                         CCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCGCCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG     <  SRR4302535.1961040/94‑1 (MQ=24)
                                                                                         CCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG     <  SRR4302535.4008282/94‑1 (MQ=25)
                                                                                         CCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG     <  SRR4302535.2400971/94‑1 (MQ=25)
                                                                                         CCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG     >  SRR4302535.3166207/1‑94 (MQ=25)
                                                                                         CCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG     <  SRR4302535.4018889/94‑1 (MQ=26)
                                                                                         CCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG     <  SRR4302535.4257203/94‑1 (MQ=26)
                                                                                         CCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG     <  SRR4302535.3786176/94‑1 (MQ=26)
                                                                                          CAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGG    >  SRR4302535.1036453/1‑94 (MQ=25)
                                                                                          CAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGG    <  SRR4302535.3649687/94‑1 (MQ=26)
                                                                                           AGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGC   >  SRR4302535.4102251/1‑94 (MQ=26)
                                                                                           AGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGC   >  SRR4302535.4100133/1‑94 (MQ=26)
                                                                                           AGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGC   >  SRR4302535.2898335/1‑94 (MQ=26)
                                                                                            GATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCA  <  SRR4302535.2084278/94‑1 (MQ=26)
                                                                                            GATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCA  <  SRR4302535.3596152/94‑1 (MQ=26)
                                                                                            GATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCA  >  SRR4302535.3146192/1‑94 (MQ=26)
                                                                                             |                                                                                            
CTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCA  >  NC_000913/3620126‑3620311

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑