Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAA > NC_000913/3620126‑3620312
|
GTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGG < SRR4302543.1914431/94‑1 (MQ=0)
GTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGG < SRR4302543.4005084/94‑1 (MQ=0)
CTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGG > SRR4302543.1344196/1‑94 (MQ=0)
CTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGG > SRR4302543.5492638/1‑94 (MQ=0)
CTCGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGG > SRR4302543.3210175/1‑94 (MQ=0)
CGGGAAAGTGAAATGCTGGGTGACCGGGTGAGTGAGAAAAGCCGCCGCTGGTTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGG < SRR4302543.6193693/94‑1 (MQ=0)
GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTG < SRR4302543.4322893/94‑1 (MQ=0)
GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTG > SRR4302543.4772172/1‑94 (MQ=0)
GAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGG > SRR4302543.7579882/1‑94 (MQ=0)
AAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGA < SRR4302543.2897700/94‑1 (MQ=0)
AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGAC < SRR4302543.5518623/94‑1 (MQ=0)
AGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACC < SRR4302543.6657096/94‑1 (MQ=0)
AGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACC < SRR4302543.7436447/94‑1 (MQ=0)
TGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCG < SRR4302543.4037241/94‑1 (MQ=0)
TGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCG > SRR4302543.4975605/1‑94 (MQ=0)
AAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGT < SRR4302543.5237200/94‑1 (MQ=0)
AAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGT < SRR4302543.6313588/94‑1 (MQ=0)
AATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTG < SRR4302543.5024890/94‑1 (MQ=0)
AATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTG < SRR4302543.1266233/94‑1 (MQ=0)
AATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTG > SRR4302543.1436617/1‑94 (MQ=0)
ATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGT > SRR4302543.4602003/1‑94 (MQ=0)
ATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGT > SRR4302543.34969/1‑94 (MQ=0)
ATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGT < SRR4302543.5504794/94‑1 (MQ=0)
CCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTAC < SRR4302543.5069729/94‑1 (MQ=0)
CCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTAC < SRR4302543.2133081/94‑1 (MQ=0)
TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACAC < SRR4302543.2163198/94‑1 (MQ=0)
TGGATGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACAC < SRR4302543.5320799/94‑1 (MQ=0)
GGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCGTCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACG < SRR4302543.7460605/94‑1 (MQ=0)
GGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACG > SRR4302543.435932/1‑94 (MQ=0)
GGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACG < SRR4302543.2711673/94‑1 (MQ=0)
GCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGC < SRR4302543.7347745/94‑1 (MQ=0)
GGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCG < SRR4302543.1208535/94‑1 (MQ=0)
GACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGG < SRR4302543.4664199/94‑1 (MQ=0)
CGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGC > SRR4302543.4248449/1‑94 (MQ=0)
GTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAA < SRR4302543.1128196/94‑1 (MQ=0)
GTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGCGGACCCGGTGCACACGCCGGCGCGAA > SRR4302543.7036794/1‑94 (MQ=0)
GAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAA < SRR4302543.3122126/94‑1 (MQ=0)
GAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAA < SRR4302543.1916599/94‑1 (MQ=0)
AGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAA > SRR4302543.3257581/1‑94 (MQ=0)
GAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCC < SRR4302543.6965484/94‑1 (MQ=0)
AAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCT < SRR4302543.3726185/94‑1 (MQ=0)
AAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCT < SRR4302543.7265152/94‑1 (MQ=0)
AAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCT > SRR4302543.6955523/1‑94 (MQ=0)
AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTG < SRR4302543.1534059/94‑1 (MQ=0)
GCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTA < SRR4302543.6841400/94‑1 (MQ=0)
CCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTAC > SRR4302543.2809262/1‑94 (MQ=0)
CCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTAC > SRR4302543.6671819/1‑94 (MQ=0)
CGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACC < SRR4302543.4485657/94‑1 (MQ=0)
CGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACC < SRR4302543.5073798/94‑1 (MQ=0)
CGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACC > SRR4302543.1618348/1‑94 (MQ=0)
GCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCA < SRR4302543.4627725/94‑1 (MQ=0)
GCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCA > SRR4302543.2123920/1‑94 (MQ=0)
CCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCAC > SRR4302543.6795472/1‑94 (MQ=0)
CGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGGACACGCCGGCGCGAAAAATCCACCTGTACCACT > SRR4302543.7113688/1‑94 (MQ=0)
CTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGC > SRR4302543.1738780/1‑94 (MQ=0)
TGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCG < SRR4302543.6454420/94‑1 (MQ=0)
GGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGA > SRR4302543.3669450/1‑94 (MQ=0)
GTGGCATCGTGCGGCCTGACCGTGGAGCAGATGTAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACC < SRR4302543.7673907/94‑1 (MQ=0)
CTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACC < SRR4302543.5288359/94‑1 (MQ=0)
CTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACC < SRR4302543.2770413/94‑1 (MQ=0)
GGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCAT < SRR4302543.2580920/94‑1 (MQ=0)
GGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCAT > SRR4302543.1665266/1‑94 (MQ=0)
GGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCAT < SRR4302543.5791818/94‑1 (MQ=0)
GCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATC < SRR4302543.469922/94‑1 (MQ=0)
GCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATC < SRR4302543.4919725/94‑1 (MQ=0)
CATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCG < SRR4302543.5763139/94‑1 (MQ=0)
ATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGC > SRR4302543.4698332/1‑94 (MQ=0)
ATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGC > SRR4302543.5001070/1‑94 (MQ=0)
TCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCG < SRR4302543.6865722/94‑1 (MQ=0)
GTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGC > SRR4302543.2150799/1‑94 (MQ=0)
GCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT < SRR4302543.442645/94‑1 (MQ=0)
CGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTG < SRR4302543.4355672/94‑1 (MQ=0)
GGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGC > SRR4302543.5179237/1‑94 (MQ=0)
GGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGC > SRR4302543.448118/1‑94 (MQ=0)
GCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTATACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCC > SRR4302543.5751354/1‑94 (MQ=0)
CTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGC > SRR4302543.7545338/1‑94 (MQ=0)
TGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCT < SRR4302543.7416813/94‑1 (MQ=0)
TGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCT < SRR4302543.513475/94‑1 (MQ=0)
GACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTG < SRR4302543.3586966/94‑1 (MQ=0)
ACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGG > SRR4302543.499431/1‑94 (MQ=0)
ACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGG > SRR4302543.5633403/1‑94 (MQ=0)
CGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCG > SRR4302543.5897426/1‑94 (MQ=0)
GTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGC > SRR4302543.1590332/1‑94 (MQ=0)
GAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCA < SRR4302543.3905043/94‑1 (MQ=8)
GAGCAGATGAAAAACCAGGTGGACCCAGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCA > SRR4302543.3479961/1‑94 (MQ=7)
GGCAGATGAAAAACCAGGTGGCCCCGGTGTACACGCCGGCGCGAAAAAGCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCAT < SRR4302543.3973469/94‑1 (MQ=11)
AGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCAT < SRR4302543.7744383/94‑1 (MQ=12)
AGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCAT < SRR4302543.3061070/94‑1 (MQ=12)
GCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATC < SRR4302543.3343996/94‑1 (MQ=15)
GCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATC < SRR4302543.767380/94‑1 (MQ=15)
GCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTACGACCATCGCGGCCTGCCGCTGGCGCTCATC > SRR4302543.6233483/1‑94 (MQ=14)
GCAGATGAAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTtgtc < SRR4302543.7083933/94‑5 (MQ=0)
CAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCA < SRR4302543.6941058/94‑1 (MQ=0)
CAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCA > SRR4302543.4766836/1‑94 (MQ=0)
CAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCA > SRR4302543.5501224/1‑94 (MQ=20)
CAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCA < SRR4302543.6947140/94‑1 (MQ=20)
CAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCA > SRR4302543.6596053/1‑94 (MQ=20)
CAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCA < SRR4302543.3637918/94‑1 (MQ=20)
CAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCA < SRR4302543.7306332/94‑1 (MQ=20)
CAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCA > SRR4302543.7106184/1‑94 (MQ=20)
AGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG > SRR4302543.7414233/1‑94 (MQ=0)
AGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG < SRR4302543.478468/94‑1 (MQ=0)
AGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG < SRR4302543.2685468/94‑1 (MQ=23)
AGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG > SRR4302543.2908972/1‑94 (MQ=23)
AGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG < SRR4302543.2657255/94‑1 (MQ=23)
AGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG > SRR4302543.5049460/1‑94 (MQ=23)
AGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG > SRR4302543.3291187/1‑94 (MQ=23)
AGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG < SRR4302543.362691/94‑1 (MQ=23)
GATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGC > SRR4302543.3865527/1‑94 (MQ=0)
GATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGC < SRR4302543.7161368/94‑1 (MQ=0)
GATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGC > SRR4302543.1420328/1‑94 (MQ=25)
ATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCA > SRR4302543.462957/1‑94 (MQ=5)
ATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCA > SRR4302543.2145315/1‑94 (MQ=5)
ATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCA < SRR4302543.6847233/94‑1 (MQ=25)
ATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCA > SRR4302543.4882619/1‑94 (MQ=25)
ATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCA > SRR4302543.4882618/1‑94 (MQ=25)
TGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAC > SRR4302543.5124151/1‑94 (MQ=12)
TGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAC < SRR4302543.3578548/94‑1 (MQ=12)
TGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAC < SRR4302543.458997/94‑1 (MQ=12)
TGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAC > SRR4302543.6114212/1‑94 (MQ=12)
TGAAAAACCAGGTGGGCCCGGTGTACACGCCGGCGCGAAAAATCCGCCTGTGCCACGGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAC < SRR4302543.4592349/94‑1 (MQ=23)
TGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAC < SRR4302543.5496650/94‑1 (MQ=28)
GCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACG > SRR4302543.8006476/1‑94 (MQ=21)
GCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACG < SRR4302543.3108554/94‑1 (MQ=21)
GAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACG > SRR4302543.2148855/1‑94 (MQ=30)
GAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACG < SRR4302543.4330922/94‑1 (MQ=30)
GAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACG < SRR4302543.4458881/94‑1 (MQ=30)
GAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACG < SRR4302543.5785861/94‑1 (MQ=30)
caaacCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGG < SRR4302543.1437583/89‑1 (MQ=27)
CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGG > SRR4302543.6950893/1‑94 (MQ=23)
AAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGG > SRR4302543.4261331/1‑94 (MQ=28)
AAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGG > SRR4302543.844924/1‑94 (MQ=28)
AAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGG > SRR4302543.3804285/1‑94 (MQ=28)
AAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAA > SRR4302543.4970767/1‑94 (MQ=25)
AAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAA < SRR4302543.3847513/94‑1 (MQ=25)
AAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAA > SRR4302543.1365386/1‑94 (MQ=26)
AACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG < SRR4302543.2161877/94‑1 (MQ=25)
AACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG > SRR4302543.3722453/1‑94 (MQ=25)
AACCAGGTGGACCCGGTGTACACGCCGGCGCAAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG < SRR4302543.6891436/94‑1 (MQ=24)
AACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCCCCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG < SRR4302543.880187/94‑1 (MQ=25)
AACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG > SRR4302543.7580670/1‑94 (MQ=26)
ACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGG < SRR4302543.1973346/94‑1 (MQ=25)
ACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGG < SRR4302543.3800600/94‑1 (MQ=25)
ACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCCCCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGG < SRR4302543.6922963/94‑1 (MQ=25)
ACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCCCTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGG < SRR4302543.3859217/94‑1 (MQ=25)
ACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGG > SRR4302543.5909128/1‑94 (MQ=26)
ACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGG > SRR4302543.1277298/1‑94 (MQ=26)
ACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGG < SRR4302543.6221585/94‑1 (MQ=26)
CCAGGTGGCCCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG < SRR4302543.3414093/94‑1 (MQ=24)
CCAGGTGGCCCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG < SRR4302543.5893504/94‑1 (MQ=24)
CCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGCCCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG < SRR4302543.3381304/94‑1 (MQ=24)
CCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG < SRR4302543.4414679/94‑1 (MQ=25)
CCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG < SRR4302543.3902926/94‑1 (MQ=25)
CCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG < SRR4302543.193853/94‑1 (MQ=25)
CCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG > SRR4302543.4518683/1‑94 (MQ=25)
CCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG < SRR4302543.2457554/94‑1 (MQ=26)
CCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG < SRR4302543.4773468/94‑1 (MQ=26)
CCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG < SRR4302543.1925327/94‑1 (MQ=26)
CCAGAGGGCCCCGGTGTACACGCCGGCGCGAAAAATCCCCCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG < SRR4302543.1474402/94‑1 (MQ=23)
CAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGG < SRR4302543.3367124/94‑1 (MQ=25)
CAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCCCCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGG < SRR4302543.1553264/94‑1 (MQ=25)
CAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGG > SRR4302543.521366/1‑94 (MQ=26)
CAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGG > SRR4302543.372832/1‑94 (MQ=26)
CAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGG < SRR4302543.6622451/94‑1 (MQ=26)
CAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGG < SRR4302543.593589/94‑1 (MQ=26)
CAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGG > SRR4302543.2226721/1‑94 (MQ=26)
AGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGC > SRR4302543.6653551/1‑94 (MQ=26)
GGTGGACCCGTTGTACCCGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCA < SRR4302543.1656774/94‑1 (MQ=24)
GATGGACCCGGTGTACACGCCGGCGCGAAAAATCCGCCTGTACCACGGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCA < SRR4302543.7596503/94‑1 (MQ=24)
GATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCA < SRR4302543.1457183/94‑1 (MQ=26)
GATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCA < SRR4302543.6201562/94‑1 (MQ=26)
GTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAA > SRR4302543.4814951/1‑94 (MQ=26)
ATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAA < SRR4302543.7807700/94‑1 (MQ=26)
|
CTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAA > NC_000913/3620126‑3620312
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
