Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	700,788	A→G	G10G (GGT→GGC)	nagC ←	NagC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	700,788	0	A	G	99.1%	1086.4 / NA	332	G10G (GGT→GGC)	nagC	NagC
Reads supporting (aligned to +/- strand): ref base A (0/1); major base G (194/134); minor base T (2/1); total (196/136)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 340 total aligned reads displayed.

CTCGGCAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTACCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAAAA  >  NC_000913/700698‑700877

cTCGGCAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGcc                                                                                         >  1:8540791/1‑93 (MQ=255)

  cGGCAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTa                                                                                       <  2:8915108/93‑1 (MQ=255)

  cGGCAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTa                                                                                       >  1:1653283/1‑93 (MQ=255)

   ggCAATCTGAATCCGCGAGATTGGCCCGTGCTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTAt                                                                                      >  1:494326/1‑93 (MQ=255)

    gCAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATc                                                                                     >  1:670844/1‑93 (MQ=255)

     cAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCt                                                                                    <  1:8732890/93‑1 (MQ=255)

     cAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCt                                                                                    <  1:8902362/93‑1 (MQ=255)

     cAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCt                                                                                    >  2:2076111/1‑93 (MQ=255)

       aTCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGa                                                                                  >  2:4137888/1‑93 (MQ=255)

        tCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAg                                                                                 <  2:6907768/93‑1 (MQ=255)

        tCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAg                                                                                 <  2:5096827/93‑1 (MQ=255)

        tCTGAACCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAg                                                                                 <  2:6313541/93‑1 (MQ=255)

         cTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGc                                                                                >  1:9717859/1‑93 (MQ=255)

          tGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCt                                                                               <  2:92130/93‑1 (MQ=255)

          tGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCt                                                                               <  1:5399190/93‑1 (MQ=255)

           gAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCtt                                                                              >  2:4778333/1‑93 (MQ=255)

           gAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCtt                                                                              <  1:2844179/93‑1 (MQ=255)

                      aTTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGgt                                                                   >  1:95732/1‑93 (MQ=255)

                       ttGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGgtg                                                                  <  1:9841348/93‑1 (MQ=255)

                       ttGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGgtg                                                                  <  2:8277282/93‑1 (MQ=255)

                        tGGCCCGTACTGGTCAATCAGGCGATAACCCGCCGCGCTGTTAAACTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGgtgt                                                                 <  2:2184058/93‑1 (MQ=255)

                        tGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGgtgt                                                                 <  1:5861814/93‑1 (MQ=255)

                         ggCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTc                                                                <  1:6448013/93‑1 (MQ=255)

                          gCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCa                                                               <  1:1924834/93‑1 (MQ=255)

                           cccGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCAt                                                              >  2:3152977/1‑93 (MQ=255)

                           cccGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCAt                                                              >  2:1421438/1‑93 (MQ=255)

                            ccGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATa                                                             <  2:1798061/93‑1 (MQ=255)

                             cGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATAc                                                            >  2:4710471/1‑93 (MQ=255)

                             cGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATAc                                                            <  2:5980830/93‑1 (MQ=255)

                             cGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATAc                                                            >  2:8784980/1‑93 (MQ=255)

                             cGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATAc                                                            >  1:1192347/1‑93 (MQ=255)

                             cGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATAc                                                            >  1:6084691/1‑93 (MQ=255)

                              gTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTTCCTATCTGAGCTTGTCCGCCTGGCGTCATACt                                                           >  2:4203197/1‑93 (MQ=255)

                              gTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACt                                                           >  1:9635026/1‑93 (MQ=255)

                               tACTGGTCATTCAGGCTATAAACCGCCGCGCTGTTAAGCTGTTTTTCGAGTTCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCTTACtt                                                          >  2:8972629/1‑93 (MQ=255)

                               tACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACtt                                                          >  2:3729452/1‑93 (MQ=255)

                               tACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACtt                                                          <  1:898407/93‑1 (MQ=255)

                               tACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACtt                                                          >  2:8831640/1‑93 (MQ=255)

                               tACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGGTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGCGTCATACtt                                                          >  2:8389224/1‑93 (MQ=255)

                                aCTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACttt                                                         >  1:4599945/1‑93 (MQ=255)

                                 cTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTtc                                                        <  2:5827132/93‑1 (MQ=255)

                                  tgctCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTtct                                                       <  2:6152457/90‑1 (MQ=255)

                                  tGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTtct                                                       <  2:7167237/93‑1 (MQ=255)

                                   ggTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTtctc                                                      >  1:5352676/1‑93 (MQ=255)

                                   ggTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTtctc                                                      >  2:1231235/1‑93 (MQ=255)

                                    gTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTctct                                                     <  1:9110990/93‑1 (MQ=255)

                                     tCAATCAGTCGATAAACCGCCGCGATGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCtt                                                    <  1:4024322/93‑1 (MQ=255)

                                      cAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCttt                                                   >  1:8101851/1‑92 (MQ=255)

                                         tCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTg                                                >  1:4221183/1‑93 (MQ=255)

                                         tCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTg                                                <  1:3552281/93‑1 (MQ=255)

                                          cAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGa                                               >  2:5257781/1‑93 (MQ=255)

                                           aGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAg                                              >  1:7470340/1‑93 (MQ=255)

                                            ggCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGt                                             >  1:5618635/1‑93 (MQ=255)

                                            ggCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGt                                             >  1:2489301/1‑93 (MQ=255)

                                             gCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGtt                                            >  1:1486891/1‑93 (MQ=255)

                                             gCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGtt                                            <  1:1065806/93‑1 (MQ=255)

                                             gCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGtt                                            >  2:6605844/1‑93 (MQ=255)

                                              cGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTa                                           >  1:3901563/1‑93 (MQ=255)

                                               gATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTAc                                          >  2:2862919/1‑93 (MQ=255)

                                                aTAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACg                                         >  1:7038593/1‑93 (MQ=255)

                                                aTAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACg                                         >  1:8089287/1‑93 (MQ=255)

                                                 tAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGa                                        <  1:1391616/93‑1 (MQ=255)

                                                   aaCCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGAcc                                      <  1:4795327/93‑1 (MQ=255)

                                                   aaCCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGAcc                                      <  2:9657039/93‑1 (MQ=255)

                                                    agcgccgcGCGGTTAAGCGGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCt                                     <  2:8106321/91‑1 (MQ=255)

                                                    aCCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCt                                     <  2:5570946/93‑1 (MQ=255)

                                                       gccgcGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGt                                  >  2:6783637/1‑93 (MQ=255)

                                                       gccgcGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGt                                  >  1:9244735/1‑93 (MQ=255)

                                                       gccgcGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGt                                  >  2:569003/1‑93 (MQ=255)

                                                        cctcgcTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGtt                                 <  2:439559/90‑1 (MQ=255)

                                                          gcgcTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTAc                               <  1:6230886/93‑1 (MQ=255)

                                                             cTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGt                            <  1:1780693/93‑1 (MQ=255)

                                                               gTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTa                          >  2:4491113/1‑93 (MQ=255)

                                                               gTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTa                          >  2:4317728/1‑93 (MQ=255)

                                                               gTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTa                          >  2:3530085/1‑93 (MQ=255)

                                                                ttAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTaa                         <  2:2957438/93‑1 (MQ=255)

                                                                tgaaGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTaa                         <  1:8228434/91‑1 (MQ=255)

                                                                 tAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAAc                        >  2:7478677/1‑93 (MQ=255)

                                                                 tAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAAc                        >  2:7817891/1‑93 (MQ=255)

                                                                 tAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAAc                        >  1:3180141/1‑93 (MQ=255)

                                                                   aGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGa                      <  1:8799568/93‑1 (MQ=255)

                                                                       gTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGt                  <  2:7227852/93‑1 (MQ=255)

                                                                         tttACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCt                >  1:7817268/1‑93 (MQ=255)

                                                                          ttACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCtt               <  1:7714513/93‑1 (MQ=255)

                                                                           tACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTg              <  1:4987198/93‑1 (MQ=255)

                                                                            aCGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTgg             >  2:2437946/1‑93 (MQ=255)

                                                                             cGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGt            <  2:4921762/93‑1 (MQ=255)

                                                                               agaTCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGa          >  1:3029758/1‑93 (MQ=255)

                                                                                 aTCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGAtt        <  2:7649304/93‑1 (MQ=255)

                                                                                 aTCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGAtt        <  2:1040576/93‑1 (MQ=255)

                                                                                  tCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGAttt       >  2:3942784/1‑93 (MQ=255)

                                                                                  tCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGACATACTTTCTCTTCTTGAGCTACGACCTCGTTACCGTTAACGATGGTCTTGGTGAttt       >  2:7305868/1‑93 (MQ=255)

                                                                                   cAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGAtttt      >  1:722065/1‑93 (MQ=255)

                                                                                   cAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGAtttt      <  2:5638711/93‑1 (MQ=255)

                                                                                   cAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGAtttt      >  1:3291885/1‑93 (MQ=255)

                                                                                    aaCATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTa     >  2:699710/1‑93 (MQ=255)

                                                                                    aaCATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTa     <  2:8661024/93‑1 (MQ=255)

                                                                                     aCATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTaa    >  2:3281221/1‑93 (MQ=255)

                                                                                       aTTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTaaaa  >  2:7937601/1‑93 (MQ=255)

                                                                                       aTTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTaaaa  >  2:2542958/1‑93 (MQ=255)

CTCGGCAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTACCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAAAA  >  NC_000913/700698‑700877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCTCGGCAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTACCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAAAATCAG  >  NC_000913/700697‑700881

GCTCGGCAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCC                                                                                             <  SRR4302540.3846843/94‑1 (MQ=60)

GCTCGGCAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCC                                                                                             >  SRR4302540.8640030/1‑94 (MQ=60)

GCTCGGCAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCC                                                                                             <  SRR4302540.7620594/94‑1 (MQ=60)

GCTCGGCAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCC                                                                                             >  SRR4302540.4146075/1‑94 (MQ=60)

GCTCAGCAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCC                                                                                             <  SRR4302540.6962158/94‑1 (MQ=60)

  TCGGCAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTA                                                                                           >  SRR4302540.1671303/1‑94 (MQ=60)

   CGGCAATCTGAATCCGCGAGATTGGCCCGTGCTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTAT                                                                                          >  SRR4302540.499627/1‑94 (MQ=60)

   CGGCAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTAT                                                                                          <  SRR4302540.3004809/94‑1 (MQ=60)

   CGGCAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTAT                                                                                          >  SRR4302540.1502102/1‑94 (MQ=60)

    GGCAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATC                                                                                         >  SRR4302540.678033/1‑94 (MQ=60)

      CAATCTGACTCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTG                                                                                       <  SRR4302540.9005423/94‑1 (MQ=60)

      CAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTG                                                                                       <  SRR4302540.9005424/94‑1 (MQ=60)

      CAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTG                                                                                       <  SRR4302540.8834301/94‑1 (MQ=60)

      CAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTG                                                                                       <  SRR4302540.4030111/94‑1 (MQ=60)

       AATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGA                                                                                      >  SRR4302540.2256026/1‑94 (MQ=60)

       AATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGA                                                                                      >  SRR4302540.3083994/1‑94 (MQ=60)

       AATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGA                                                                                      <  SRR4302540.6744349/94‑1 (MQ=60)

       AATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGA                                                                                      >  SRR4302540.4187030/1‑94 (MQ=60)

       AATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGA                                                                                      >  SRR4302540.8191062/1‑94 (MQ=60)

       AATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGCTTTACGAGATCAACATTGCCTATCTGA                                                                                      >  SRR4302540.8191061/1‑94 (MQ=60)

        ATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAG                                                                                     <  SRR4302540.972506/94‑1 (MQ=60)

        ATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAG                                                                                     >  SRR4302540.6218966/1‑94 (MQ=60)

         TCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGC                                                                                    >  SRR4302540.9832035/1‑94 (MQ=60)

           TGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTT                                                                                  <  SRR4302540.5458554/94‑1 (MQ=60)

           TGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTT                                                                                  >  SRR4302540.9755847/1‑94 (MQ=60)

           TGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTT                                                                                  <  SRR4302540.7059039/94‑1 (MQ=60)

           TGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTT                                                                                  >  SRR4302540.3283434/1‑94 (MQ=60)

            GAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTG                                                                                 <  SRR4302540.2874956/94‑1 (MQ=60)

               TCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCC                                                                              <  SRR4302540.9702321/94‑1 (MQ=60)

                  GCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCC                                                                           <  SRR4302540.173531/94‑1 (MQ=60)

                   CGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCT                                                                          <  SRR4302540.7921882/94‑1 (MQ=60)

                    GAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTG                                                                         >  SRR4302540.7447498/1‑94 (MQ=60)

                      GATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGT                                                                       >  SRR4302540.96744/1‑94 (MQ=60)

                       ATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTG                                                                      <  SRR4302540.550409/94‑1 (MQ=60)

                       ATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTG                                                                      >  SRR4302540.2570114/1‑94 (MQ=60)

                       ATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTG                                                                      >  SRR4302540.8312124/1‑94 (MQ=60)

                        TTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGT                                                                     <  SRR4302540.9956401/94‑1 (MQ=60)

                        TTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGT                                                                     <  SRR4302540.1172510/94‑1 (MQ=60)

                         TGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTC                                                                    <  SRR4302540.5926636/94‑1 (MQ=60)

                         TGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTC                                                                    <  SRR4302540.1494373/94‑1 (MQ=60)

                          GGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCA                                                                   >  SRR4302540.5444845/1‑94 (MQ=60)

                          GGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCA                                                                   >  SRR4302540.5444846/1‑94 (MQ=60)

                          GGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCA                                                                   <  SRR4302540.6519791/94‑1 (MQ=60)

                           GCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCAT                                                                  <  SRR4302540.3628342/94‑1 (MQ=60)

                           GCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCAT                                                                  <  SRR4302540.1945815/94‑1 (MQ=60)

                           GCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCAT                                                                  >  SRR4302540.8331328/1‑94 (MQ=60)

                             CCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATAC                                                                >  SRR4302540.368054/1‑94 (MQ=60)

                             CCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATAC                                                                >  SRR4302540.6152405/1‑94 (MQ=60)

                             CCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATAC                                                                >  SRR4302540.1204635/1‑94 (MQ=60)

                             CCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATAC                                                                <  SRR4302540.2754583/94‑1 (MQ=60)

                              CGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACT                                                               >  SRR4302540.9748541/1‑94 (MQ=60)

                               GTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTTCCTATCTGATCTTGTCCGCCTGGTGTCATACTT                                                              >  SRR4302540.9054552/1‑94 (MQ=60)

                               GTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTT                                                              >  SRR4302540.6695067/1‑94 (MQ=60)

                               GTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTT                                                              >  SRR4302540.6464258/1‑94 (MQ=60)

                               GTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTT                                                              >  SRR4302540.3116783/1‑94 (MQ=60)

                               GTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTT                                                              >  SRR4302540.10049681/1‑94 (MQ=60)

                               GTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTT                                                              >  SRR4302540.9499582/1‑94 (MQ=60)

                                TACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTT                                                             >  SRR4302540.4649385/1‑94 (MQ=60)

                                TACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTT                                                             <  SRR4302540.907964/94‑1 (MQ=60)

                                TACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTT                                                             >  SRR4302540.9914381/1‑94 (MQ=60)

                                 ACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTC                                                            <  SRR4302540.4295556/94‑1 (MQ=60)

                                 ACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTC                                                            >  SRR4302540.5663243/1‑94 (MQ=60)

                                 ACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTC                                                            >  SRR4302540.4986128/1‑94 (MQ=60)

                                  CTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCT                                                           >  SRR4302540.7689482/1‑94 (MQ=60)

                                  CTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCT                                                           <  SRR4302540.17644/94‑1 (MQ=60)

                                  CTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCT                                                           >  SRR4302540.8259673/1‑94 (MQ=60)

                                   TGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTC                                                          >  SRR4302540.5411436/1‑94 (MQ=60)

                                    GGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCT                                                         <  SRR4302540.7645967/94‑1 (MQ=60)

                                     GTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTT                                                        <  SRR4302540.9220489/94‑1 (MQ=60)

                                      TCAATCAGTCGATAAACCGCCGCGATGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTA                                                       <  SRR4302540.4067701/94‑1 (MQ=60)

                                      TCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTT                                                       >  SRR4302540.8195885/1‑94 (MQ=60)

                                       CAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTAT                                                      >  SRR4302540.1103079/1‑94 (MQ=60)

                                        AATCAGGCGATAAACCGCCTCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCC‑GGTGTCATACTTTCTCTTATTG                                                    <  SRR4302540.8898066/94‑1 (MQ=60)

                                        AATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATT                                                     <  SRR4302540.1752424/94‑1 (MQ=60)

                                        AATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATT                                                     >  SRR4302540.5198469/1‑94 (MQ=60)

                                        AATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATT                                                     >  SRR4302540.979935/1‑94 (MQ=60)

                                         ATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTG                                                    >  SRR4302540.4267139/1‑94 (MQ=60)

                                         ATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTG                                                    >  SRR4302540.3273793/1‑94 (MQ=60)

                                          TCAGGCGATACACCGCCGCGCTGGTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGA                                                   <  SRR4302540.7892629/94‑1 (MQ=60)

                                          TCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGA                                                   <  SRR4302540.3591095/94‑1 (MQ=60)

                                           CAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAG                                                  >  SRR4302540.7553685/1‑94 (MQ=60)

                                           CAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAG                                                  <  SRR4302540.4040040/94‑1 (MQ=60)

                                            AGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGT                                                 >  SRR4302540.5680458/1‑94 (MQ=60)

                                            AGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGT                                                 >  SRR4302540.2516113/1‑94 (MQ=60)

                                             GGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTT                                                >  SRR4302540.1503224/1‑94 (MQ=60)

                                             GGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTT                                                >  SRR4302540.1217491/1‑94 (MQ=60)

                                              GCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTA                                               <  SRR4302540.1076669/94‑1 (MQ=60)

                                              GCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTA                                               >  SRR4302540.3943889/1‑94 (MQ=60)

                                               CGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATTTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTAC                                              >  SRR4302540.9035201/1‑94 (MQ=60)

                                               CGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTAC                                              <  SRR4302540.9761399/94‑1 (MQ=60)

                                               CGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTAC                                              >  SRR4302540.1803732/1‑94 (MQ=60)

                                                GATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACG                                             >  SRR4302540.7116838/1‑94 (MQ=60)

                                                GATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACG                                             >  SRR4302540.7116837/1‑94 (MQ=60)

                                                GATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACG                                             >  SRR4302540.8183181/1‑94 (MQ=60)

                                                GATAAACCACCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACG                                             >  SRR4302540.5001096/1‑94 (MQ=60)

                                                 ATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGA                                            >  SRR4302540.618566/1‑94 (MQ=60)

                                                  TAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGAC                                           <  SRR4302540.7121782/94‑1 (MQ=60)

                                                  TAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGAC                                           >  SRR4302540.3453150/1‑94 (MQ=60)

                                                  TAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGAC                                           <  SRR4302540.1406514/94‑1 (MQ=60)

                                                  TAAAACGCCGCGCTGTTAAGCTGTTTTACGAGATAAAAATTGCTTATCTGAGCTTGTCCGCCTGGTGTCATCCTTTCTCTTATTGAGTTACGAC                                           <  SRR4302540.8999443/94‑1 (MQ=60)

                                                    AACCGGCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCT                                         <  SRR4302540.6108156/94‑1 (MQ=60)

                                                    AACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCT                                         <  SRR4302540.4846929/94‑1 (MQ=60)

                                                    AACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCT                                         <  SRR4302540.4846627/94‑1 (MQ=60)

                                                       CGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGT                                      >  SRR4302540.9355439/1‑94 (MQ=60)

                                                           GCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACC                                  <  SRR4302540.8065139/94‑1 (MQ=60)

                                                           GCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACC                                  <  SRR4302540.8888109/94‑1 (MQ=60)

                                                           GCGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACC                                  <  SRR4302540.6300184/94‑1 (MQ=60)

                                                            CGCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCG                                 >  SRR4302540.3372003/1‑94 (MQ=60)

                                                             GCTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGT                                <  SRR4302540.4538545/94‑1 (MQ=60)

                                                              CTGTTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTT                               <  SRR4302540.1800027/94‑1 (MQ=60)

                                                                 TTAAGCTGTTTTTCGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGGCCTCGTTACCGTTAAC                            <  SRR4302540.7536828/94‑1 (MQ=60)

                                                                 TTAAGCTGTTTTACGAGATCAACATTGCCTATTTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAAC                            >  SRR4302540.6987543/1‑94 (MQ=60)

                                                                 TTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAAC                            <  SRR4302540.7532650/94‑1 (MQ=60)

                                                                 TTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAAC                            <  SRR4302540.1373648/94‑1 (MQ=60)

                                                                 TTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAAC                            >  SRR4302540.6133912/1‑94 (MQ=60)

                                                                 TTAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAAC                            >  SRR4302540.3214693/1‑94 (MQ=60)

                                                                 TGAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAAC                            <  SRR4302540.8324081/94‑1 (MQ=60)

                                                                  TAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACG                           >  SRR4302540.9248838/1‑94 (MQ=60)

                                                                  TAAGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACG                           >  SRR4302540.9838401/1‑94 (MQ=60)

                                                                   AAGCTGTTTTACGAGGTCAACATTGCCTATCTGAGCTTGTCCGCCTGGTCGCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGGTCACGA                          >  SRR4302540.1619042/1‑94 (MQ=60)

                                                                    AGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGAT                         <  SRR4302540.6153219/94‑1 (MQ=60)

                                                                    AGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGAT                         <  SRR4302540.8901307/94‑1 (MQ=60)

                                                                    AGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGAT                         <  SRR4302540.277321/94‑1 (MQ=60)

                                                                    AGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGAT                         <  SRR4302540.8901306/94‑1 (MQ=60)

                                                                    AGCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGAG                         >  SRR4302540.949080/1‑94 (MQ=60)

                                                                     GCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATG                        >  SRR4302540.478730/1‑94 (MQ=60)

                                                                     GCTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATG                        <  SRR4302540.6945634/94‑1 (MQ=60)

                                                                      CTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGG                       >  SRR4302540.6498965/1‑94 (MQ=60)

                                                                      CTGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGG                       >  SRR4302540.4845840/1‑94 (MQ=60)

                                                                       TGTTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGT                      >  SRR4302540.5865969/1‑94 (MQ=60)

                                                                         TTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATTCTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCT                    <  SRR4302540.3009814/94‑1 (MQ=60)

                                                                         TTTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCT                    >  SRR4302540.7908623/1‑94 (MQ=60)

                                                                          TTTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTT                   <  SRR4302540.8496461/94‑1 (MQ=60)

                                                                           TTACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTG                  <  SRR4302540.7803465/94‑1 (MQ=60)

                                                                            TACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGG                 >  SRR4302540.1482262/1‑94 (MQ=60)

                                                                            TACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGG                 <  SRR4302540.5041197/94‑1 (MQ=60)

                                                                             ACGAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGT                <  SRR4302540.1667101/94‑1 (MQ=60)

                                                                               GAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGT              >  SRR4302540.8384776/1‑94 (MQ=60)

                                                                               GAGATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGA              >  SRR4302540.3063030/1‑94 (MQ=60)

                                                                                 GATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGTTT            >  SRR4302540.7860988/1‑94 (MQ=60)

                                                                                 GATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATT            >  SRR4302540.9075419/1‑94 (MQ=60)

                                                                                 GATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATT            >  SRR4302540.9427804/1‑94 (MQ=60)

                                                                                  ATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTT           >  SRR4302540.4178364/1‑94 (MQ=60)

                                                                                  ATCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTT           >  SRR4302540.9225688/1‑94 (MQ=60)

                                                                                   TCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTT          >  SRR4302540.3134394/1‑94 (MQ=60)

                                                                                   TCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTT          >  SRR4302540.729804/1‑94 (MQ=60)

                                                                                   TCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTT          >  SRR4302540.3327902/1‑94 (MQ=60)

                                                                                   TCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTT          >  SRR4302540.5053298/1‑94 (MQ=60)

                                                                                   TCAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTT          >  SRR4302540.5014847/1‑94 (MQ=60)

                                                                                    CAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTA         <  SRR4302540.8054577/94‑1 (MQ=60)

                                                                                    CAACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTA         >  SRR4302540.4904833/1‑94 (MQ=60)

                                                                                     AACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAA        >  SRR4302540.9186523/1‑94 (MQ=60)

                                                                                     AACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAA        >  SRR4302540.9186524/1‑94 (MQ=60)

                                                                                     AACATTACCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAA        <  SRR4302540.2043219/94‑1 (MQ=60)

                                                                                      ACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAAA       <  SRR4302540.3734796/94‑1 (MQ=60)

                                                                                      ACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAAA       >  SRR4302540.1817557/1‑94 (MQ=60)

                                                                                      ACATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAAA       >  SRR4302540.570763/1‑94 (MQ=60)

                                                                                       CATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAAAA      >  SRR4302540.873243/1‑94 (MQ=60)

                                                                                       CATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAAAA      >  SRR4302540.8725513/1‑94 (MQ=60)

                                                                                       CATTGCCTATCTAAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAAAA      <  SRR4302540.5911122/94‑1 (MQ=60)

                                                                                        ATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAAAAT     <  SRR4302540.5266804/94‑1 (MQ=60)

                                                                                        ATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAAAAT     >  SRR4302540.2095848/1‑94 (MQ=60)

                                                                                        ATTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAAAAT     >  SRR4302540.10063587/1‑94 (MQ=60)

                                                                                         TTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAAAATC    >  SRR4302540.6240185/1‑94 (MQ=60)

                                                                                         TTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAAAATC    >  SRR4302540.341788/1‑94 (MQ=60)

                                                                                         TTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAAAATC    >  SRR4302540.3165505/1‑94 (MQ=60)

                                                                                         TTGCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAAAATC    <  SRR4302540.174005/94‑1 (MQ=60)

                                                                                           GCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAAAATCAG  <  SRR4302540.7752917/94‑1 (MQ=60)

                                                                                           GCCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAAAATCAG  <  SRR4302540.6373583/94‑1 (MQ=60)

GCTCGGCAATCTGAATCCGCGAGATTGGCCCGTACTGGTCAATCAGGCGATAAACCGCCGCGCTGTTAAGCTGTTTTACGAGATCAACATTACCTATCTGAGCTTGTCCGCCTGGTGTCATACTTTCTCTTATTGAGTTACGACCTCGTTACCGTTAACGATGGTCTTGGTGATTTTAAAATCAG  >  NC_000913/700697‑700881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`