Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	741,626	T→C	S52G (AGC→GGC)	ybgH ←	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	741,626	0	T	C	99.4%	1041.9 / ‑4.4	326	S52G (AGC→GGC)	ybgH	putative transport protein
Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (218/106); total (219/107)
Fisher's exact test for biased strand distribution p-value = 5.49e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

Only 100 of 340 total aligned reads displayed.

CCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAAT  >  NC_000913/741536‑741715

   gCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATa                                                                                      <  2:5614615/93‑1 (MQ=255)

   gCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATa                                                                                      >  1:2137673/1‑93 (MQ=255)

    cATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATaa                                                                                     >  1:2525693/1‑93 (MQ=255)

    cATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATaa                                                                                     >  1:7697116/1‑93 (MQ=255)

     aTCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAAc                                                                                    <  2:6573640/93‑1 (MQ=255)

      tCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGATGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACt                                                                                   >  1:1690666/1‑93 (MQ=255)

      tCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACt                                                                                   >  2:4146233/1‑93 (MQ=255)

      tCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACt                                                                                   >  1:6632323/1‑93 (MQ=255)

      tCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACt                                                                                   >  2:6130489/1‑93 (MQ=255)

      tCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACt                                                                                   >  2:7713759/1‑93 (MQ=255)

      tCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACt                                                                                   <  2:2756043/93‑1 (MQ=255)

       cACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTc                                                                                  >  1:8328219/1‑93 (MQ=255)

          cGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTa                                                                               >  1:2603046/1‑93 (MQ=255)

           gCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATACCTCGTAg                                                                              >  1:7866416/1‑93 (MQ=255)

           gCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAg                                                                              >  2:7060538/1‑93 (MQ=255)

           gCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAg                                                                              <  1:9567357/93‑1 (MQ=255)

            ccATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAgg                                                                             >  2:9303059/1‑93 (MQ=255)

            ccATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAgg                                                                             >  1:5297088/1‑93 (MQ=255)

             cATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGc                                                                            >  1:2976280/1‑93 (MQ=255)

                gCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTg                                                                         >  2:111069/1‑93 (MQ=255)

                 cGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGa                                                                        <  1:1429049/93‑1 (MQ=255)

                 cGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGa                                                                        <  1:362987/93‑1 (MQ=255)

                  gATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAg                                                                       >  2:3983875/1‑93 (MQ=255)

                   aTTGCCGAGAACTTTATCCGCCAAAAAGACACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGGGAGt                                                                      >  2:8629411/1‑93 (MQ=255)

                      gCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATc                                                                   >  1:3115727/1‑93 (MQ=255)

                      gCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATc                                                                   >  1:8666503/1‑93 (MQ=255)

                      gCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATc                                                                   >  1:2842635/1‑93 (MQ=255)

                      gCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATc                                                                   <  2:268077/93‑1 (MQ=255)

                       ccGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCg                                                                  >  1:1365309/1‑93 (MQ=255)

                         gagaACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGtt                                                                >  1:6325215/1‑93 (MQ=255)

                         gagaACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGtt                                                                >  1:701946/1‑93 (MQ=255)

                          agaACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTg                                                               >  1:6868374/1‑93 (MQ=255)

                           gaACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGt                                                              >  1:6205555/1‑93 (MQ=255)

                            aaCTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTa                                                             <  2:9433062/93‑1 (MQ=255)

                            aaCTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTa                                                             <  2:6819744/93‑1 (MQ=255)

                              cTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTAtt                                                           >  2:2179292/1‑93 (MQ=255)

                                  aTCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAg                                                       <  2:4829085/93‑1 (MQ=255)

                                  aTCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAg                                                       <  1:10002288/93‑1 (MQ=255)

                                   tCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGt                                                      <  2:6162580/93‑1 (MQ=255)

                                     cGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTg                                                    >  2:8514542/1‑93 (MQ=255)

                                       ccAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGAt                                                  >  2:6887070/1‑93 (MQ=255)

                                        cAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGAtt                                                 <  1:3705849/93‑1 (MQ=255)

                                          aaaaGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTgg                                               <  1:3948030/93‑1 (MQ=255)

                                          aaaaGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTgg                                               <  1:1170556/93‑1 (MQ=255)

                                          aaaaGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTgg                                               >  2:8872136/1‑93 (MQ=255)

                                          aaaaGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACCCGTAGGCGCGAGTATCGTTGTATTTTAGTTGATTgg                                               >  1:4092761/1‑93 (MQ=255)

                                           aaaGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGt                                              >  1:5605994/1‑93 (MQ=255)

                                           aaaGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGt                                              >  2:1598309/1‑93 (MQ=255)

                                            aaGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTg                                             <  1:9927174/93‑1 (MQ=255)

                                               ccACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTgaga                                          <  1:6400705/93‑1 (MQ=255)

                                               ccACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTgaga                                          <  2:1919407/93‑1 (MQ=255)

                                                 aCCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATa                                        <  1:6706166/93‑1 (MQ=255)

                                                 aCCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATa                                        >  1:5757328/1‑93 (MQ=255)

                                                  ccGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATag                                       >  1:2028672/1‑93 (MQ=255)

                                                  ccGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATag                                       >  2:5395042/1‑93 (MQ=255)

                                                  ccGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATag                                       >  2:871142/1‑93 (MQ=255)

                                                  ccGAGGATTGGCGTGACATACACCAGCGAACAGGAGGCGCCAAATCACTCGACGGGGAGAGTATCGTTGTATTTTAGTTGGTTGGAGAGATag                                       >  2:3214753/1‑93 (MQ=255)

                                                  ccGAGGATTGGCGGGACATACACCAGCTATCAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATag                                       <  2:6384027/93‑1 (MQ=255)

                                                     aGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAgaga                                    >  2:5827922/1‑93 (MQ=255)

                                                      ggATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGaa                                   <  1:1902631/93‑1 (MQ=255)

                                                      ggATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGaa                                   >  2:7164064/1‑93 (MQ=255)

                                                       gATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAAt                                  >  2:3627074/1‑93 (MQ=255)

                                                       gATTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAAt                                  >  1:5104341/1‑93 (MQ=255)

                                                        aTTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATc                                 >  1:1070818/1‑93 (MQ=255)

                                                        aTTGGCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATc                                 >  2:7391582/1‑93 (MQ=255)

                                                           ggCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATcaga                              >  1:5202370/1‑92 (MQ=255)

                                                           ggCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGCATCGTTGTATTTTAGTTGATTGGAGAGATAGAGAATaagc                              >  2:8345366/1‑93 (MQ=255)

                                                            gCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTGGTTGATTGGTGAGGTAGAGAATcagca                             >  2:4996309/1‑93 (MQ=255)

                                                            gCGTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATcagca                             >  2:4568583/1‑93 (MQ=255)

                                                              gTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAgg                           >  1:3786429/1‑93 (MQ=255)

                                                              gTGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAgg                           <  2:7518237/93‑1 (MQ=255)

                                                               tGACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAggg                          >  2:6662618/1‑93 (MQ=255)

                                                                gACATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGc                         >  1:7295738/1‑93 (MQ=255)

                                                                 aCATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCa                        >  1:1830673/1‑93 (MQ=255)

                                                                 aCATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCa                        <  2:9103518/93‑1 (MQ=255)

                                                                 aCATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCa                        >  1:5440361/1‑93 (MQ=255)

                                                                 aCATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCa                        <  1:7550970/93‑1 (MQ=255)

                                                                  cATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCAc                       <  1:1525806/93‑1 (MQ=255)

                                                                  cATACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCAc                       <  1:8766260/93‑1 (MQ=255)

                                                                   aTACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCCCg                      >  2:5471476/1‑93 (MQ=255)

                                                                    tACACCAGCGAACAGTAGGCGCCAAATAACTCGTCGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAAGCAGCAGGGCACGc                     >  1:8994102/1‑93 (MQ=255)

                                                                    tACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGc                     >  1:4825764/1‑93 (MQ=255)

                                                                    tACACCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGc                     >  2:1560062/1‑93 (MQ=255)

                                                                      cacaAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGGGAGAATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCGCGCAt                   >  2:5288674/1‑93 (MQ=255)

                                                                      cacCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCAt                   <  1:4409842/93‑1 (MQ=255)

                                                                       acCAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATg                  >  2:3552825/1‑93 (MQ=255)

                                                                        ccAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGc                 >  2:2775604/1‑93 (MQ=255)

                                                                        ccAGCGAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGc                 <  1:277234/93‑1 (MQ=255)

                                                                             gAACAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTaa            <  1:9237149/93‑1 (MQ=255)

                                                                              aaCAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGGGAGATAGAGAATCAGCGGGGCACGCATGCCGCaaa           >  2:786114/1‑93 (MQ=255)

                                                                                cAGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAg         <  1:8257781/93‑1 (MQ=255)

                                                                                 aGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGc        >  1:6098677/1‑93 (MQ=255)

                                                                                 aGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGc        >  1:7487864/1‑93 (MQ=255)

                                                                                 aGTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGc        >  1:2372654/1‑93 (MQ=255)

                                                                                  gTAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCt       >  2:3295477/1‑93 (MQ=255)

                                                                                   tAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTa      >  1:7180698/1‑93 (MQ=255)

                                                                                   tAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTa      >  2:2228170/1‑93 (MQ=255)

                                                                                   tAGGCGCCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTa      >  2:3734698/1‑93 (MQ=255)

                                                                                      gcgcCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTaaaa   >  2:8230221/1‑93 (MQ=255)

                                                                                       cgcCAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAat  >  2:1361767/1‑93 (MQ=255)

CCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCTAAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAAT  >  NC_000913/741536‑741715

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCT‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTC  >  NC_000913/741534‑741719

CCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAACAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑A                                                                                              >  SRR4302540.1567548/1‑94 (MQ=60)

CCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑A                                                                                              >  SRR4302540.5417365/1‑94 (MQ=60)

  CCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAA                                                                                            >  SRR4302540.1476707/1‑94 (MQ=60)

  CCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAA                                                                                            >  SRR4302540.8846675/1‑94 (MQ=60)

   CAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGGCACCGAGGATTGGCGTGACATACACCAGCGAGCAGTAGGCGCC‑AAAT                                                                                           >  SRR4302540.3451774/1‑94 (MQ=60)

   CAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAAT                                                                                           >  SRR4302540.3811683/1‑94 (MQ=60)

    AGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATA                                                                                          >  SRR4302540.5699273/1‑94 (MQ=60)

    AGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATA                                                                                          <  SRR4302540.9537712/94‑1 (MQ=60)

    AGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATA                                                                                          >  SRR4302540.2160637/1‑94 (MQ=60)

     GCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAA                                                                                         >  SRR4302540.7784882/1‑94 (MQ=60)

     GCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAA                                                                                         >  SRR4302540.2552956/1‑94 (MQ=60)

      CATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAAC                                                                                        >  SRR4302540.3938006/1‑94 (MQ=60)

      CATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAAC                                                                                        >  SRR4302540.2606362/1‑94 (MQ=60)

      CATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAAC                                                                                        >  SRR4302540.8566703/1‑94 (MQ=60)

       ATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGATGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACT                                                                                       >  SRR4302540.1708999/1‑94 (MQ=60)

       ATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACT                                                                                       >  SRR4302540.2234326/1‑94 (MQ=60)

       ATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACT                                                                                       >  SRR4302540.7565562/1‑94 (MQ=60)

       ATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACT                                                                                       >  SRR4302540.7565561/1‑94 (MQ=60)

       ATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACT                                                                                       >  SRR4302540.6705733/1‑94 (MQ=60)

       ATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACT                                                                                       >  SRR4302540.409264/1‑94 (MQ=60)

        TCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTC                                                                                      >  SRR4302540.6660082/1‑94 (MQ=60)

        TCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTC                                                                                      >  SRR4302540.8424876/1‑94 (MQ=60)

          ACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGT                                                                                    >  SRR4302540.5412633/1‑94 (MQ=60)

           CCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTA                                                                                   >  SRR4302540.2631122/1‑94 (MQ=60)

           CCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTA                                                                                   <  SRR4302540.1147253/94‑1 (MQ=60)

           CCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTA                                                                                   <  SRR4302540.1588218/94‑1 (MQ=60)

            CGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATACCTCGTAG                                                                                  >  SRR4302540.7958314/1‑94 (MQ=60)

            CGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAG                                                                                  <  SRR4302540.6971102/94‑1 (MQ=60)

            CGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAG                                                                                  <  SRR4302540.5131249/94‑1 (MQ=60)

             GCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGG                                                                                 >  SRR4302540.5355034/1‑94 (MQ=60)

             GCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGG                                                                                 <  SRR4302540.6153084/94‑1 (MQ=60)

             GCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGG                                                                                 <  SRR4302540.9680417/94‑1 (MQ=60)

             GCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGG                                                                                 >  SRR4302540.1537071/1‑94 (MQ=60)

              CCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGC                                                                                <  SRR4302540.5093962/94‑1 (MQ=60)

              CCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGC                                                                                <  SRR4302540.3776121/94‑1 (MQ=60)

              CCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGC                                                                                >  SRR4302540.3009173/1‑94 (MQ=60)

               CATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCG                                                                               >  SRR4302540.7197374/1‑94 (MQ=60)

                ATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGT                                                                              >  SRR4302540.7982257/1‑94 (MQ=60)

                ATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGT                                                                              >  SRR4302540.3553111/1‑94 (MQ=60)

                ATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGT                                                                              >  SRR4302540.2487405/1‑94 (MQ=60)

                   CGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGGGCC‑AAATAACTCGgagccggggg                                                                           >  SRR4302540.9149686/1‑84 (MQ=60)

                   CGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAG                                                                           <  SRR4302540.1444519/94‑1 (MQ=60)

                   CGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAG                                                                           >  SRR4302540.7244445/1‑94 (MQ=60)

                   CGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAG                                                                           >  SRR4302540.9149687/1‑94 (MQ=60)

                   CGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAG                                                                           <  SRR4302540.366714/94‑1 (MQ=60)

                    GATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGT                                                                          >  SRR4302540.9119589/1‑94 (MQ=60)

                     ATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTA                                                                         <  SRR4302540.7298824/94‑1 (MQ=60)

                     ATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTA                                                                         >  SRR4302540.7346570/1‑94 (MQ=60)

                     ATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTA                                                                         <  SRR4302540.5568124/94‑1 (MQ=60)

                     ATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTA                                                                         <  SRR4302540.8357850/94‑1 (MQ=60)

                     ATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTA                                                                         >  SRR4302540.2462181/1‑94 (MQ=60)

                      TTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTAT                                                                        <  SRR4302540.6307578/94‑1 (MQ=60)

                      TTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTAGTAGGCGTGAGTAT                                                                        <  SRR4302540.2101010/94‑1 (MQ=60)

                       TGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATC                                                                       >  SRR4302540.2873395/1‑94 (MQ=60)

                       TGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATC                                                                       >  SRR4302540.8767169/1‑94 (MQ=60)

                       TGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATC                                                                       >  SRR4302540.3149793/1‑94 (MQ=60)

                        GCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCG                                                                      >  SRR4302540.1379745/1‑94 (MQ=60)

                         CCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGT                                                                     >  SRR4302540.5330678/1‑94 (MQ=60)

                         CCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGT                                                                     <  SRR4302540.4195969/94‑1 (MQ=60)

                          CGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATCACTCGTAGGCGTGAGTATCGTT                                                                    >  SRR4302540.7578536/1‑94 (MQ=60)

                          CGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTT                                                                    >  SRR4302540.1416478/1‑94 (MQ=60)

                          CGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTT                                                                    >  SRR4302540.5565628/1‑94 (MQ=60)

                          CGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTT                                                                    >  SRR4302540.4181509/1‑94 (MQ=60)

                          CGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTT                                                                    >  SRR4302540.6395653/1‑94 (MQ=60)

                          CGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTT                                                                    >  SRR4302540.6395652/1‑94 (MQ=60)

                          CGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTT                                                                    >  SRR4302540.709480/1‑94 (MQ=60)

                          CGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTT                                                                    >  SRR4302540.538378/1‑94 (MQ=60)

                           GAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTG                                                                   >  SRR4302540.8774442/1‑94 (MQ=60)

                           GAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTG                                                                   >  SRR4302540.6944512/1‑94 (MQ=60)

                           GAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTG                                                                   >  SRR4302540.6433285/1‑94 (MQ=60)

                           GAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTG                                                                   <  SRR4302540.411749/94‑1 (MQ=60)

                            AGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGT                                                                  <  SRR4302540.2121118/94‑1 (MQ=60)

                            AGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGT                                                                  >  SRR4302540.18032/1‑94 (MQ=60)

                            AGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGT                                                                  >  SRR4302540.6274626/1‑94 (MQ=60)

                            AGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGT                                                                  <  SRR4302540.1947088/94‑1 (MQ=60)

                             GAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTA                                                                 >  SRR4302540.3710251/1‑94 (MQ=60)

                             GAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTA                                                                 <  SRR4302540.5729129/94‑1 (MQ=60)

                              AACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTAT                                                                >  SRR4302540.8233844/1‑94 (MQ=60)

                              AACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTAT                                                                >  SRR4302540.1349016/1‑94 (MQ=60)

                              AACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTAT                                                                >  SRR4302540.1349018/1‑94 (MQ=60)

                              AACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTAT                                                                <  SRR4302540.2086190/94‑1 (MQ=60)

                               ACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATT                                                               >  SRR4302540.5150300/1‑94 (MQ=60)

                                CTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTT                                                              <  SRR4302540.283551/94‑1 (MQ=60)

                                 TTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTT                                                             >  SRR4302540.8682122/1‑94 (MQ=60)

                                 TTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTT                                                             <  SRR4302540.6193998/94‑1 (MQ=60)

                                 TTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTT                                                             >  SRR4302540.6325733/1‑94 (MQ=60)

                                  TTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTA                                                            <  SRR4302540.5962985/94‑1 (MQ=60)

                                   TATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCT‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAG                                                           <  SRR4302540.2562793/94‑1 (MQ=60)

                                   TATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAG                                                           <  SRR4302540.391738/94‑1 (MQ=60)

                                    ATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGT                                                          <  SRR4302540.10118803/94‑1 (MQ=60)

                                    ATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGT                                                          <  SRR4302540.9849270/94‑1 (MQ=60)

                                     TCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTT                                                         <  SRR4302540.1004556/94‑1 (MQ=60)

                                      CCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTG                                                        >  SRR4302540.7261604/1‑94 (MQ=60)

                                       CGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGA                                                       <  SRR4302540.3780956/94‑1 (MQ=60)

                                        GCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGAT                                                      >  SRR4302540.5333095/1‑94 (MQ=60)

                                         CCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATT                                                     >  SRR4302540.1070096/1‑94 (MQ=60)

                                         CCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATT                                                     >  SRR4302540.1477644/1‑94 (MQ=60)

                                         CCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATT                                                     >  SRR4302540.7850983/1‑94 (MQ=60)

                                         CCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATT                                                     <  SRR4302540.6457898/94‑1 (MQ=60)

                                         CCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATG                                                     >  SRR4302540.2810556/1‑94 (MQ=60)

                                          CAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTG                                                    <  SRR4302540.3746301/94‑1 (MQ=60)

                                          CAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTG                                                    <  SRR4302540.10157565/94‑1 (MQ=60)

                                           AAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACCCGTAGGCGCGAGTATCGTTGTATTTTAGTTGATTGG                                                   >  SRR4302540.4136915/1‑94 (MQ=60)

                                            AAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGT                                                  >  SRR4302540.5667674/1‑94 (MQ=60)

                                            AAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGT                                                  <  SRR4302540.3990652/94‑1 (MQ=60)

                                            AAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGT                                                  <  SRR4302540.1182676/94‑1 (MQ=60)

                                             AAAGCCACCGAGGATTGGCGTGGCATACACCAGCGAACACTAGGCGCC‑AAATAACTCATAGGCGGAAGAATCGTTGTGTTGTGGTTGATTGGTG                                                 >  SRR4302540.2617857/1‑94 (MQ=42)

                                              AAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGA                                                <  SRR4302540.10043068/94‑1 (MQ=60)

                                                 CCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGAT                                             <  SRR4302540.10025717/94‑1 (MQ=60)

                                                 CCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGAT                                             <  SRR4302540.6471953/94‑1 (MQ=60)

                                                  CACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATA                                            >  SRR4302540.5820884/1‑94 (MQ=60)

                                                  CACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATA                                            >  SRR4302540.5218747/1‑94 (MQ=60)

                                                  CACCGAGGATTGGCGTGACATACACCAGCGAACAGGAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATG                                            >  SRR4302540.3130512/1‑94 (MQ=60)

                                                   ACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAG                                           <  SRR4302540.6780177/94‑1 (MQ=60)

                                                   ACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAG                                           >  SRR4302540.2050574/1‑94 (MQ=60)

                                                    CCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGA                                          >  SRR4302540.1840611/1‑94 (MQ=60)

                                                     CGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAG                                         <  SRR4302540.8838116/94‑1 (MQ=60)

                                                     CGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAG                                         >  SRR4302540.3113218/1‑94 (MQ=60)

                                                     CGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAG                                         >  SRR4302540.6496363/1‑94 (MQ=60)

                                                      GAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGA                                        <  SRR4302540.1659413/94‑1 (MQ=60)

                                                       AGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAA                                       <  SRR4302540.1852539/94‑1 (MQ=60)

                                                        GGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAAT                                      >  SRR4302540.5159597/1‑94 (MQ=60)

                                                        GGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAAT                                      <  SRR4302540.1923434/94‑1 (MQ=60)

                                                        GGATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAAT                                      >  SRR4302540.6939230/1‑94 (MQ=60)

                                                         GATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATC                                     >  SRR4302540.6724188/1‑94 (MQ=60)

                                                         GATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATC                                     >  SRR4302540.1081737/1‑94 (MQ=60)

                                                         GATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATC                                     >  SRR4302540.6724187/1‑94 (MQ=60)

                                                          ATTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCA                                    >  SRR4302540.3004286/1‑94 (MQ=60)

                                                           TTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAG                                   >  SRR4302540.2010883/1‑94 (MQ=60)

                                                           TTGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAG                                   >  SRR4302540.4806459/1‑94 (MQ=60)

                                                            TGGCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGA                                  >  SRR4302540.5259027/1‑94 (MQ=60)

                                                              GCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAG                                <  SRR4302540.5366736/94‑1 (MQ=60)

                                                              GCGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAG                                <  SRR4302540.2263074/94‑1 (MQ=60)

                                                               CGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGG                               >  SRR4302540.4981744/1‑94 (MQ=60)

                                                               CGTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGG                               >  SRR4302540.3827712/1‑94 (MQ=60)

                                                                GTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGG                              >  SRR4302540.7018453/1‑94 (MQ=60)

                                                                GTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGG                              >  SRR4302540.1352249/1‑94 (MQ=60)

                                                                GTGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGG                              >  SRR4302540.5248991/1‑94 (MQ=60)

                                                                 TGACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGC                             >  SRR4302540.7377163/1‑94 (MQ=60)

                                                                  GACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCA                            >  SRR4302540.2674555/1‑94 (MQ=60)

                                                                  GACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCA                            >  SRR4302540.5500217/1‑94 (MQ=60)

                                                                  GACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCA                            >  SRR4302540.1850703/1‑94 (MQ=60)

                                                                   ACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATTAGCAGAGCAC                           >  SRR4302540.185328/1‑94 (MQ=60)

                                                                   ACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCAC                           <  SRR4302540.7635613/94‑1 (MQ=60)

                                                                   ACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCAC                           >  SRR4302540.6272608/1‑94 (MQ=60)

                                                                   ACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCAC                           >  SRR4302540.4378005/1‑94 (MQ=60)

                                                                   ACATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCAC                           >  SRR4302540.4543607/1‑94 (MQ=60)

                                                                    CATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACG                          <  SRR4302540.1542707/94‑1 (MQ=60)

                                                                    CATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACG                          <  SRR4302540.8867874/94‑1 (MQ=60)

                                                                     ATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTCGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAAGCAGCAGGGCACGC                         >  SRR4302540.9101991/1‑94 (MQ=60)

                                                                     ATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGC                         >  SRR4302540.3739364/1‑94 (MQ=60)

                                                                     ATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGC                         >  SRR4302540.9101990/1‑94 (MQ=60)

                                                                     ATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGC                         <  SRR4302540.7657094/94‑1 (MQ=60)

                                                                     ATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGC                         >  SRR4302540.4877444/1‑94 (MQ=60)

                                                                     ATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGC                         >  SRR4302540.7619422/1‑94 (MQ=60)

                                                                     ATACACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGC                         >  SRR4302540.2646146/1‑94 (MQ=60)

                                                                       acccccgcgaaaaagAGGCGCC‑AAATAACTCGGAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCAT                       <  SRR4302540.7541524/79‑1 (MQ=60)

                                                                        CACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATG                      <  SRR4302540.4457644/94‑1 (MQ=60)

                                                                         ACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGC                     >  SRR4302540.8205874/1‑94 (MQ=60)

                                                                         ACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGC                     >  SRR4302540.7637235/1‑94 (MQ=60)

                                                                         ACCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGC                     >  SRR4302540.6727476/1‑94 (MQ=60)

                                                                          CCAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCC                    <  SRR4302540.279962/94‑1 (MQ=60)

                                                                           CAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCG                   >  SRR4302540.8393982/1‑94 (MQ=60)

                                                                           CAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCG                   <  SRR4302540.7001699/94‑1 (MQ=60)

                                                                           CAGCGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCG                   <  SRR4302540.3398783/94‑1 (MQ=60)

                                                                              CGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCATGGCACGCATGCCGTAA                >  SRR4302540.9079262/1‑94 (MQ=60)

                                                                              CGAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAA                >  SRR4302540.1890928/1‑94 (MQ=60)

                                                                               GAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAA               <  SRR4302540.9347817/94‑1 (MQ=60)

                                                                               GAACAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAA               >  SRR4302540.1397962/1‑94 (MQ=60)

                                                                                 ACAGTAGGCGCC‑AAATATCTCGTAGGCGTGAGTATCGTTGTATTGTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCCCGCATGCCGTAAAAG             <  SRR4302540.5689903/94‑1 (MQ=60)

                                                                                  CAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGC            >  SRR4302540.7725575/1‑94 (MQ=60)

                                                                                  CAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGC            >  SRR4302540.6166570/1‑94 (MQ=60)

                                                                                  CAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGC            <  SRR4302540.8353748/94‑1 (MQ=60)

                                                                                  CAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGC            >  SRR4302540.7571449/1‑94 (MQ=60)

                                                                                  CAGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGC            >  SRR4302540.2398217/1‑94 (MQ=60)

                                                                                   AGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCT           <  SRR4302540.2936566/94‑1 (MQ=60)

                                                                                   AGTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCT           >  SRR4302540.1089247/1‑94 (MQ=60)

                                                                                    GTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTA          >  SRR4302540.9358866/1‑94 (MQ=60)

                                                                                    GTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTA          >  SRR4302540.7260754/1‑94 (MQ=60)

                                                                                    GTAGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTA          >  SRR4302540.6872430/1‑94 (MQ=60)

                                                                                      AGGCGCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAA        >  SRR4302540.283617/1‑94 (MQ=60)

                                                                                          GCTAAAATAACTCG‑AAGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATAT    <  SRR4302540.5271233/94‑1 (MQ=60)

                                                                                          GCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATAT    <  SRR4302540.4270849/94‑1 (MQ=60)

                                                                                          GCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATAT    >  SRR4302540.4349755/1‑94 (MQ=60)

                                                                                          GCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATAT    >  SRR4302540.45383/1‑94 (MQ=60)

                                                                                          GCC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATACCGTAAAAGCTAAAATAT    >  SRR4302540.7496021/1‑94 (MQ=60)

                                                                                           CC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATT   >  SRR4302540.3283117/1‑94 (MQ=60)

                                                                                           CC‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATT   >  SRR4302540.9985124/1‑94 (MQ=60)

                                                                                            C‑AAATAACTCGTAGGCGTGAGTTTCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTC  <  SRR4302540.792526/94‑1 (MQ=60)

                                                                                            C‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTC  >  SRR4302540.8986558/1‑94 (MQ=60)

                                                                                            C‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTC  >  SRR4302540.202120/1‑94 (MQ=60)

                                                                                            C‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTC  >  SRR4302540.626992/1‑94 (MQ=60)

                                                                                            C‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTC  >  SRR4302540.1152120/1‑94 (MQ=60)

                                                                                            C‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTC  >  SRR4302540.6074569/1‑94 (MQ=60)

                                                                                            C‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTC  <  SRR4302540.6004193/94‑1 (MQ=60)

CCCCAGCATCACCGCCATGCGATTGCCGAGAACTTTATCCGCCAAAAAGCCACCGAGGATTGGCGTGACATACACCAGCGAACAGTAGGCGCT‑AAATAACTCGTAGGCGTGAGTATCGTTGTATTTTAGTTGATTGGTGAGATAGAGAATCAGCAGGGCACGCATGCCGTAAAAGCTAAAATATTC  >  NC_000913/741534‑741719

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`