Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 888,802 (A)7→6 coding (241/1686 nt) b0847 ← putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913888,7960A.99.5% 1717.8 / 1.3 385coding (247/1686 nt)b0847putative transport protein
Reads supporting (aligned to +/- strand):  ref base A (0/2);  major base . (227/153);  minor base G (1/1);  total (228/157)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.76e-01

Only 100 of 440 total aligned reads displayed.

CAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGT  >  NC_000913/888704‑888884
                                                                                            |                                                                                        
  ggttACCCAACCCCAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaa                                                                                        <  2:6742646/91‑1 (MQ=255)
  gCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaa                                                                                        >  1:106208/1‑93 (MQ=255)
  gCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaa                                                                                        <  1:423672/93‑1 (MQ=255)
  gCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaa                                                                                        >  1:5620691/1‑93 (MQ=255)
  gCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaa                                                                                        <  2:8524913/93‑1 (MQ=255)
   cTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaaa                                                                                       <  1:7734925/93‑1 (MQ=255)
   cTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaaa                                                                                       >  2:226052/1‑93 (MQ=255)
    ttACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaaaa                                                                                      <  2:7329100/93‑1 (MQ=255)
      aCCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaaaaag                                                                                    <  1:1406235/93‑2 (MQ=255)
      aCCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaaaaag                                                                                    >  1:9617187/1‑92 (MQ=255)
       ccTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaaaaagt                                                                                   >  1:9485602/1‑91 (MQ=255)
       ccTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaaaaagt                                                                                   >  2:1721465/1‑91 (MQ=255)
        cTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTACCATCGCGAAAAAAAATGGaaaaaagtt                                                                                  >  1:1529455/1‑90 (MQ=255)
         tAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaaaaagttc                                                                                 <  1:6217299/93‑5 (MQ=255)
         tAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaaaaagttc                                                                                 >  2:2456075/1‑89 (MQ=255)
         tAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaaaaagttc                                                                                 <  1:7112316/93‑5 (MQ=255)
            cccTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGt                                                                             <  1:272227/93‑1 (MQ=255)
            cccTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGt                                                                             <  1:5101922/93‑1 (MQ=255)
              cTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTcc                                                                           <  1:5894883/93‑1 (MQ=255)
              cTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTcc                                                                           >  1:4101202/1‑93 (MQ=255)
               tAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCg                                                                          >  1:1846609/1‑93 (MQ=255)
                aaGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATTGAAAAAAGTGCGGTCCgg                                                                         >  2:5666595/1‑93 (MQ=255)
                aaGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCgg                                                                         <  2:5092660/93‑1 (MQ=255)
                aaGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCgg                                                                         >  1:5692844/1‑93 (MQ=255)
                  ggCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCt                                                                       >  1:8196762/1‑93 (MQ=255)
                   gCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCtt                                                                      <  2:5016411/93‑1 (MQ=255)
                   gCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCtt                                                                      <  1:4784535/93‑1 (MQ=255)
                    cGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTc                                                                     >  2:8392409/1‑93 (MQ=255)
                    cGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTc                                                                     <  2:5238748/93‑1 (MQ=255)
                    cGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTc                                                                     >  2:7133320/1‑93 (MQ=255)
                      aTCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCgc                                                                   >  1:2959553/1‑92 (MQ=255)
                      aTCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGa                                                                   >  2:928000/1‑93 (MQ=255)
                      aTCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGa                                                                   >  1:3005794/1‑93 (MQ=255)
                         aCCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGAccc                                                                <  1:1240559/93‑1 (MQ=255)
                         aCCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGAccc                                                                >  1:6099187/1‑93 (MQ=255)
                          ccAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGAcccc                                                               >  1:2321048/1‑93 (MQ=255)
                          ccAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGAcccc                                                               >  1:4407517/1‑93 (MQ=255)
                          ccAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGAcccc                                                               <  1:6771004/93‑1 (MQ=255)
                            aGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGa                                                             >  2:1857019/1‑93 (MQ=255)
                              cgcACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACg                                                           <  2:3150773/93‑1 (MQ=255)
                                 aCTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAg                                                        <  2:4903698/93‑1 (MQ=255)
                                  cTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGa                                                       <  1:8553572/93‑1 (MQ=255)
                                      cAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAAt                                                   >  1:2520718/1‑93 (MQ=255)
                                       aaCCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATa                                                  >  2:7878416/1‑93 (MQ=255)
                                       aaCCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATa                                                  >  2:4117786/1‑93 (MQ=255)
                                       aaCCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATa                                                  >  1:2081837/1‑93 (MQ=255)
                                       aaCCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATa                                                  >  1:9805140/1‑93 (MQ=255)
                                       aaCCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATaa                                                 >  1:7466103/1‑93 (MQ=255)
                                        aCCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATaa                                                 >  2:7010680/1‑93 (MQ=255)
                                        aCCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATaa                                                 >  1:5550740/1‑93 (MQ=255)
                                           aTCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACa                                              >  1:6527869/1‑93 (MQ=255)
                                           aTCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACa                                              >  2:363043/1‑93 (MQ=255)
                                              aCCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTTGGTCCGGCCTCGACCCCGACGGAGAAAAAAAAAAgga                                           >  2:9880977/1‑91 (MQ=255)
                                               ccAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCAt                                          <  2:760237/93‑1 (MQ=255)
                                                cAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATa                                         <  1:8302291/93‑1 (MQ=255)
                                                cAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATa                                         <  1:8812704/93‑1 (MQ=255)
                                                   tGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAg                                      >  1:3874760/1‑93 (MQ=255)
                                                   tGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAg                                      >  2:2661499/1‑93 (MQ=255)
                                                   tGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAg                                      >  1:4992793/1‑93 (MQ=255)
                                                    gCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGc                                     >  1:2604394/1‑93 (MQ=255)
                                                    gCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGc                                     >  2:9624770/1‑93 (MQ=255)
                                                      tAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCa                                   >  2:2007975/1‑93 (MQ=255)
                                                      tAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCa                                   <  1:3156029/93‑1 (MQ=255)
                                                      tAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCa                                   >  1:8087933/1‑93 (MQ=255)
                                                       aaCATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCaa                                  >  1:494419/1‑93 (MQ=255)
                                                        aCATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAg                                 <  2:1316016/93‑1 (MQ=255)
                                                        aCATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAg                                 >  2:15089/1‑93 (MQ=255)
                                                         cATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGa                                >  1:7303204/1‑93 (MQ=255)
                                                         cATTAGGTAATTTTTCCCATCGCAAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGa                                <  2:6904366/93‑1 (MQ=255)
                                                          aTTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGAt                               >  1:5303046/1‑93 (MQ=255)
                                                          aTTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGAt                               <  1:827716/93‑1 (MQ=255)
                                                          aTTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTCCGACCCCGACGCGGAAAATAACAGCATAAAGCCAAGAtt                              >  1:4862430/1‑93 (MQ=255)
                                                           ttAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGAtt                              >  2:2846178/1‑93 (MQ=255)
                                                           ttAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGAtt                              >  2:6201229/1‑93 (MQ=255)
                                                           ttAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGAtt                              >  2:6437706/1‑93 (MQ=255)
                                                              ggTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAg                           >  1:1968412/1‑93 (MQ=255)
                                                              ggTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAg                           <  1:2852534/93‑1 (MQ=255)
                                                               gTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATACAGCCAAGATTAAgc                          >  2:5502203/1‑93 (MQ=255)
                                                                tAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGCCGCAGAAAATAAAAAGCATAAAGCCAAGATTAAgcc                         >  2:2798158/1‑92 (MQ=255)
                                                                tAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAgcg                         <  2:5991015/93‑1 (MQ=255)
                                                                    ttttCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATc                     >  2:3352998/1‑93 (MQ=255)
                                                                      ttCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCgg                   <  1:5459937/93‑1 (MQ=255)
                                                                      ttCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCgg                   <  1:3450064/93‑1 (MQ=255)
                                                                      ttCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCgg                   >  2:445404/1‑93 (MQ=255)
                                                                       tCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGgt                  >  1:1629842/1‑93 (MQ=255)
                                                                          cATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGtt               >  1:8707056/1‑93 (MQ=255)
                                                                           aTCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTa              >  2:8161741/1‑93 (MQ=255)
                                                                           aTCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTa              >  1:3659776/1‑93 (MQ=255)
                                                                           aTCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTa              <  1:5758771/93‑1 (MQ=255)
                                                                            tCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTaa             <  2:9160227/93‑1 (MQ=255)
                                                                            tCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTaa             <  1:4527927/93‑1 (MQ=255)
                                                                            tCGCGAAAAAAAATGGAAAAAAGGTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTaa             >  2:5186891/1‑93 (MQ=255)
                                                                            acgcgAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTaa             <  1:1784344/92‑1 (MQ=255)
                                                                               cgAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGc          <  2:38969/93‑1 (MQ=255)
                                                                                gAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCt         <  2:5729537/93‑1 (MQ=255)
                                                                                  aaaaaaaTGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGa       >  1:9235581/1‑93 (MQ=255)
                                                                                   aaaaaaTGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGaa      >  2:4254391/1‑93 (MQ=255)
                                                                                    aaaaaTGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGaaa     <  1:3953890/93‑1 (MQ=255)
                                                                                     aaaaTGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGaaa     <  1:8992199/93‑1 (MQ=255)
                                                                                     aaaaTGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAAt    >  1:7412427/1‑93 (MQ=255)
                                                                                            |                                                                                        
CAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGT  >  NC_000913/888704‑888884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 264 total aligned reads displayed.
TACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCCTAA  >  NC_000913/888709‑888895
                                                                                             |                                                                                              
TACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAG                                                                                                >  SRR4302540.9730564/1‑94 (MQ=60)
TACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAG                                                                                                >  SRR4302540.9730563/1‑94 (MQ=60)
  CCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTT                                                                                            >  SRR4302540.1546393/1‑94 (MQ=60)
  CCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTACCATCGCGAAAAAAAATGGAAAAAAGTT                                                                                            >  SRR4302540.1546392/1‑94 (MQ=60)
   CTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTC                                                                                           >  SRR4302540.6063731/1‑94 (MQ=60)
   CTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTC                                                                                           >  SRR4302540.1251165/1‑94 (MQ=60)
    TAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCG                                                                                          <  SRR4302540.3910329/94‑1 (MQ=60)
    TAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCG                                                                                          <  SRR4302540.8396801/94‑1 (MQ=60)
    TAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCG                                                                                          <  SRR4302540.6782747/94‑1 (MQ=60)
    TAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCG                                                                                          >  SRR4302540.4933757/1‑94 (MQ=60)
    TAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCG                                                                                          <  SRR4302540.8396802/94‑1 (MQ=60)
    TAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCG                                                                                          <  SRR4302540.7191481/94‑1 (MQ=60)
      ACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGT                                                                                        >  SRR4302540.3976981/1‑94 (MQ=60)
      ACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGT                                                                                        >  SRR4302540.3768441/1‑94 (MQ=60)
      ACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGT                                                                                        <  SRR4302540.8475269/94‑1 (MQ=60)
      ACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGT                                                                                        <  SRR4302540.1628273/94‑1 (MQ=60)
      ACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGT                                                                                        <  SRR4302540.4741325/94‑1 (MQ=60)
       CCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTC                                                                                       <  SRR4302540.274908/94‑1 (MQ=60)
       CCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTC                                                                                       <  SRR4302540.5157141/94‑1 (MQ=60)
       CCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTC                                                                                       <  SRR4302540.5815204/94‑1 (MQ=60)
        CCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCC                                                                                      >  SRR4302540.3528689/1‑94 (MQ=60)
        CCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCC                                                                                      >  SRR4302540.8287787/1‑94 (MQ=60)
        CCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCC                                                                                      >  SRR4302540.2992822/1‑94 (MQ=60)
        CCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCC                                                                                      <  SRR4302540.8364845/94‑1 (MQ=60)
        CCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCC                                                                                      >  SRR4302540.4145448/1‑94 (MQ=60)
        CCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCC                                                                                      >  SRR4302540.4145447/1‑94 (MQ=60)
         TTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCG                                                                                     <  SRR4302540.1741089/94‑1 (MQ=60)
         CTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCG                                                                                     <  SRR4302540.5959987/94‑1 (MQ=60)
         CTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCG                                                                                     >  SRR4302540.1866848/1‑94 (MQ=60)
          TAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGG                                                                                    <  SRR4302540.4614448/94‑1 (MQ=60)
          TAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGG                                                                                    >  SRR4302540.5755521/1‑94 (MQ=60)
          TAACGCGATGACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTTCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGG                                                                                    <  SRR4302540.2680158/94‑1 (MQ=60)
           AAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGC                                                                                   >  SRR4302540.2550311/1‑94 (MQ=60)
            AGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCT                                                                                  >  SRR4302540.510869/1‑94 (MQ=60)
            AGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCT                                                                                  >  SRR4302540.8292019/1‑94 (MQ=60)
             GGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTT                                                                                 >  SRR4302540.8741900/1‑94 (MQ=60)
              GCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTC                                                                                <  SRR4302540.4835683/94‑1 (MQ=60)
              GCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTC                                                                                >  SRR4302540.5347252/1‑94 (MQ=60)
               CGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCG                                                                               >  SRR4302540.1995824/1‑94 (MQ=60)
               CGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCG                                                                               >  SRR4302540.5652488/1‑94 (MQ=60)
                GATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGA                                                                              >  SRR4302540.7857425/1‑94 (MQ=60)
                GATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGA                                                                              >  SRR4302540.3038882/1‑94 (MQ=60)
                GATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGA                                                                              >  SRR4302540.2289312/1‑94 (MQ=60)
                 ATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGAC                                                                             >  SRR4302540.8155510/1‑94 (MQ=60)
                 ATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGAC                                                                             >  SRR4302540.5730775/1‑94 (MQ=60)
                 ATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGAC                                                                             <  SRR4302540.3107067/94‑1 (MQ=60)
                   CACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCC                                                                           >  SRR4302540.6167087/1‑94 (MQ=60)
                    ACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCC                                                                          <  SRR4302540.5884679/94‑1 (MQ=60)
                    ACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCC                                                                          <  SRR4302540.6921212/94‑1 (MQ=60)
                    ACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCC                                                                          >  SRR4302540.4455303/1‑94 (MQ=60)
                    ACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCC                                                                          >  SRR4302540.2346042/1‑94 (MQ=60)
                    ACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCC                                                                          >  SRR4302540.8182175/1‑94 (MQ=60)
                     CCAGCGCACTTCCAACCATCACCAGTGCGAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCG                                                                         <  SRR4302540.5561641/94‑1 (MQ=60)
                     CCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCG                                                                         <  SRR4302540.6238744/94‑1 (MQ=60)
                      CAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGA                                                                        <  SRR4302540.9453035/94‑1 (MQ=60)
                      CAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGA                                                                        >  SRR4302540.3604371/1‑94 (MQ=60)
                       CGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGAC                                                                       <  SRR4302540.3019251/94‑1 (MQ=60)
                        GCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACG                                                                      <  SRR4302540.854218/94‑1 (MQ=60)
                         CGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGC                                                                     <  SRR4302540.7187606/94‑1 (MQ=60)
                         CGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGC                                                                     >  SRR4302540.876938/1‑94 (MQ=60)
                         CGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGC                                                                     >  SRR4302540.4485117/1‑94 (MQ=60)
                          GCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCACATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGCCCCCGACCCA                                                                    >  SRR4302540.2778350/1‑94 (MQ=60)
                           CACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAG                                                                   <  SRR4302540.5058813/94‑1 (MQ=60)
                           CACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAG                                                                   >  SRR4302540.3291856/1‑94 (MQ=60)
                            ACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGA                                                                  <  SRR4302540.6176786/94‑1 (MQ=60)
                             CTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAA                                                                 >  SRR4302540.8530175/1‑94 (MQ=60)
                                CCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAAT                                                              >  SRR4302540.2547937/1‑94 (MQ=60)
                                CCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAAT                                                              >  SRR4302540.5614629/1‑94 (MQ=60)
                                 CAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATA                                                             >  SRR4302540.9919917/1‑94 (MQ=60)
                                 CAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATA                                                             >  SRR4302540.2104205/1‑94 (MQ=60)
                                 CAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATA                                                             >  SRR4302540.2505154/1‑94 (MQ=60)
                                  AACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAA                                                            >  SRR4302540.5611885/1‑94 (MQ=60)
                                    CCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAAC                                                          >  SRR4302540.8378026/1‑94 (MQ=60)
                                    CCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAAC                                                          >  SRR4302540.6462119/1‑94 (MQ=60)
                                     CATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACA                                                         >  SRR4302540.1734179/1‑94 (MQ=60)
                                     CATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACA                                                         >  SRR4302540.6600362/1‑94 (MQ=60)
                                      ATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAG                                                        >  SRR4302540.1805468/1‑94 (MQ=60)
                                      ATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAG                                                        >  SRR4302540.4270445/1‑94 (MQ=60)
                                       TCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGC                                                       <  SRR4302540.6036196/94‑1 (MQ=60)
                                         ACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCAT                                                     >  SRR4302540.4283419/1‑94 (MQ=60)
                                          CCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATA                                                    <  SRR4302540.1990253/94‑1 (MQ=60)
                                           CAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAA                                                   <  SRR4302540.8914597/94‑1 (MQ=60)
                                             GTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAG                                                 >  SRR4302540.5698662/1‑94 (MQ=60)
                                             GTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAG                                                 >  SRR4302540.8597675/1‑94 (MQ=60)
                                             GTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAG                                                 <  SRR4302540.1100009/94‑1 (MQ=60)
                                             GTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAG                                                 >  SRR4302540.3916873/1‑94 (MQ=60)
                                             GTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAG                                                 <  SRR4302540.3948467/94‑1 (MQ=60)
                                             GTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAG                                                 <  SRR4302540.3965746/94‑1 (MQ=60)
                                             GTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAG                                                 <  SRR4302540.3108554/94‑1 (MQ=60)
                                              TGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGC                                                >  SRR4302540.2632490/1‑94 (MQ=60)
                                              TGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGC                                                >  SRR4302540.1716509/1‑94 (MQ=60)
                                               GCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCC                                               <  SRR4302540.5458441/94‑1 (MQ=60)
                                                CTCACATTAGGTAATTTTTCCCATAGCGAAAAAAAATGGACAAAAGTTCGGCACGGCTTCGGCCCCGACGCAacaaaaaacacaccaaaaacaa                                              >  SRR4302540.8181817/1‑72 (MQ=35)
                                                CTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCA                                              >  SRR4302540.8181816/1‑94 (MQ=60)
                                                CTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCA                                              <  SRR4302540.5628755/94‑1 (MQ=60)
                                                CTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCA                                              <  SRR4302540.7509812/94‑1 (MQ=60)
                                                 TAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAA                                             >  SRR4302540.1442450/1‑94 (MQ=60)
                                                 TAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAA                                             >  SRR4302540.264111/1‑94 (MQ=60)
                                                 TAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAA                                             <  SRR4302540.3190381/94‑1 (MQ=60)
                                                 TAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAA                                             >  SRR4302540.499720/1‑94 (MQ=60)
                                                 TAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAA                                             <  SRR4302540.9478752/94‑1 (MQ=60)
                                                  AACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAG                                            <  SRR4302540.918775/94‑1 (MQ=60)
                                                  AACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAG                                            <  SRR4302540.9028942/94‑1 (MQ=60)
                                                   ACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGA                                           >  SRR4302540.7384725/1‑94 (MQ=60)
                                                   ACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGA                                           >  SRR4302540.7289186/1‑94 (MQ=60)
                                                    CATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGAT                                          <  SRR4302540.137409/94‑1 (MQ=60)
                                                    CATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGAT                                          >  SRR4302540.5361067/1‑94 (MQ=60)
                                                    CATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGAT                                          <  SRR4302540.6704758/94‑1 (MQ=60)
                                                    CATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGAT                                          <  SRR4302540.2112004/94‑1 (MQ=60)
                                                    CATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGACAAGAT                                          >  SRR4302540.4457796/1‑94 (MQ=60)
                                                    CATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTCCGACCCCGACGCGGAAAATAACAGCATAAAGCCAAGATT                                         >  SRR4302540.4914576/1‑94 (MQ=60)
                                                    AATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGAT                                          <  SRR4302540.521382/94‑1 (MQ=60)
                                                     ATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAAGAGCATAAAGCCAAGATT                                         >  SRR4302540.9906401/1‑94 (MQ=60)
                                                     ATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATT                                         <  SRR4302540.836514/94‑1 (MQ=60)
                                                     ATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATT                                         >  SRR4302540.4905777/1‑94 (MQ=60)
                                                     ATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATT                                         >  SRR4302540.4905776/1‑94 (MQ=60)
                                                     ATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATA                                         >  SRR4302540.189395/1‑94 (MQ=60)
                                                     ATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGGTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATT                                         >  SRR4302540.2473714/1‑94 (MQ=60)
                                                      TTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTA                                        >  SRR4302540.2850594/1‑94 (MQ=60)
                                                       TAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAA                                       <  SRR4302540.5936287/94‑1 (MQ=60)
                                                        AGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAG                                      >  SRR4302540.1989788/1‑94 (MQ=60)
                                                        AGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAG                                      <  SRR4302540.4393071/94‑1 (MQ=60)
                                                         GGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGC                                     <  SRR4302540.2883437/94‑1 (MQ=60)
                                                         GGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGC                                     >  SRR4302540.2374697/1‑94 (MQ=60)
                                                           TAGTTTGTCCCATCGCGAAAAAAAATGG‑‑AAAAAGCTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGC                                   <  SRR4302540.894313/94‑1 (MQ=60)
                                                             ATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCAT                                 <  SRR4302540.8834430/94‑1 (MQ=60)
                                                             ATTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCAT                                 >  SRR4302540.9960754/1‑94 (MQ=60)
                                                              TTTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATC                                <  SRR4302540.9906210/94‑1 (MQ=60)
                                                               TTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAACCAGCATAAAGCCAAGATTAAGCGCATCG                               >  SRR4302540.4681790/1‑94 (MQ=60)
                                                               TTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCG                               <  SRR4302540.3294928/94‑1 (MQ=60)
                                                               TTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCG                               <  SRR4302540.4253362/94‑1 (MQ=60)
                                                               TTTTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCG                               <  SRR4302540.7584068/94‑1 (MQ=60)
                                                                 TTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGT                             >  SRR4302540.516427/1‑94 (MQ=60)
                                                                 TTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGT                             <  SRR4302540.5520031/94‑1 (MQ=60)
                                                                 TTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGT                             <  SRR4302540.3487595/94‑1 (MQ=60)
                                                                 TTCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGT                             >  SRR4302540.1647684/1‑94 (MQ=60)
                                                                  tcgcgatcgtcaaaaaaaaagagAAAAAGTTCGGTCAGGCTTCCACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGT                             <  SRR4302540.2841510/71‑1 (MQ=60)
                                                                  TCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTG                            >  SRR4302540.4100677/1‑94 (MQ=60)
                                                                  TCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTG                            >  SRR4302540.7025208/1‑94 (MQ=60)
                                                                  TCCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTG                            >  SRR4302540.7351929/1‑94 (MQ=60)
                                                                   CCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGT                           >  SRR4302540.6803530/1‑94 (MQ=60)
                                                                   CCCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGT                           >  SRR4302540.9290607/1‑94 (MQ=60)
                                                                    CCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTT                          >  SRR4302540.8808124/1‑94 (MQ=60)
                                                                    CCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTT                          <  SRR4302540.1829500/94‑1 (MQ=60)
                                                                    CCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTT                          <  SRR4302540.1443043/94‑1 (MQ=60)
                                                                    CCATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTT                          <  SRR4302540.3490276/94‑1 (MQ=60)
                                                                    CCATCGCGAAAAAAAATGTAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTT                          <  SRR4302540.1443044/94‑1 (MQ=60)
                                                                     CATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTA                         >  SRR4302540.3699843/1‑94 (MQ=60)
                                                                      ATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAA                        >  SRR4302540.7508297/1‑94 (MQ=60)
                                                                      ATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAA                        <  SRR4302540.1128733/94‑1 (MQ=60)
                                                                      ATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAA                        <  SRR4302540.5822344/94‑1 (MQ=60)
                                                                      ATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAA                        >  SRR4302540.4948946/1‑94 (MQ=60)
                                                                      ATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAA                        <  SRR4302540.5822345/94‑1 (MQ=60)
                                                                      ATCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACACCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGAGTTAA                        >  SRR4302540.905288/1‑94 (MQ=60)
                                                                       TCGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAAT                       <  SRR4302540.4363257/94‑1 (MQ=60)
                                                                       ACGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAAT                       <  SRR4302540.1803727/94‑1 (MQ=60)
                                                                        CGCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATG                      >  SRR4302540.300311/1‑94 (MQ=60)
                                                                         GCGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGC                     >  SRR4302540.9628952/1‑94 (MQ=60)
                                                                          CGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCT                    >  SRR4302540.6275456/1‑94 (MQ=60)
                                                                          CGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCT                    >  SRR4302540.760284/1‑94 (MQ=60)
                                                                          CGAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCT                    >  SRR4302540.8335261/1‑94 (MQ=60)
                                                                           GAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTG                   >  SRR4302540.5023987/1‑94 (MQ=60)
                                                                           GAAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTG                   >  SRR4302540.5023988/1‑94 (MQ=60)
                                                                            AAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGA                  <  SRR4302540.7400687/94‑1 (MQ=60)
                                                                            AAAAAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGA                  >  SRR4302540.9346242/1‑94 (MQ=60)
                                                                               AAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAAT               >  SRR4302540.7494990/1‑94 (MQ=60)
                                                                               AAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAAT               >  SRR4302540.2980878/1‑94 (MQ=60)
                                                                               AAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAAT               >  SRR4302540.5422951/1‑94 (MQ=60)
                                                                               AAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAAT               <  SRR4302540.3996564/94‑1 (MQ=60)
                                                                               AAAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAAT               >  SRR4302540.7494989/1‑94 (MQ=60)
                                                                                AAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAAT               <  SRR4302540.9099979/94‑1 (MQ=60)
                                                                                AAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATG              >  SRR4302540.2097703/1‑94 (MQ=60)
                                                                                AAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATG              <  SRR4302540.2589822/94‑1 (MQ=60)
                                                                                AAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATG              >  SRR4302540.5811923/1‑94 (MQ=60)
                                                                                AAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATG              <  SRR4302540.3079694/94‑1 (MQ=60)
                                                                                AAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATG              <  SRR4302540.6515745/94‑1 (MQ=60)
                                                                                AAAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATG              >  SRR4302540.2979026/1‑94 (MQ=60)
                                                                                 AAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGATAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGACATGT             >  SRR4302540.10125241/1‑94 (MQ=60)
                                                                                 AAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGT             >  SRR4302540.7637632/1‑94 (MQ=60)
                                                                                 AAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGT             <  SRR4302540.126474/94‑1 (MQ=60)
                                                                                 AAATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGT             >  SRR4302540.7391365/1‑94 (MQ=60)
                                                                                  AATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAATAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTT            >  SRR4302540.7169861/1‑94 (MQ=60)
                                                                                  AATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTT            >  SRR4302540.6241194/1‑94 (MQ=60)
                                                                                   ATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTG           >  SRR4302540.278752/1‑94 (MQ=60)
                                                                                   ATGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTG           >  SRR4302540.2900723/1‑94 (MQ=60)
                                                                                    TGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGT          >  SRR4302540.8248182/1‑94 (MQ=60)
                                                                                    TGGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGT          <  SRR4302540.285559/94‑1 (MQ=60)
                                                                                      GGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTT         <  SRR4302540.5717474/94‑1 (MQ=60)
                                                                                      GGAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTT         <  SRR4302540.5677638/94‑1 (MQ=60)
                                                                                       GAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTG        <  SRR4302540.816037/94‑1 (MQ=60)
                                                                                       GAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTG        <  SRR4302540.4537632/94‑1 (MQ=60)
                                                                                        AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGG       >  SRR4302540.5065958/1‑94 (MQ=60)
                                                                                        AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGG       >  SRR4302540.7531091/1‑94 (MQ=60)
                                                                                         AAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGC      <  SRR4302540.6989191/94‑1 (MQ=60)
                                                                                          AAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCC     >  SRR4302540.140786/1‑94 (MQ=60)
                                                                                          AAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCC     <  SRR4302540.5808628/94‑1 (MQ=60)
                                                                                           AAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCCT    <  SRR4302540.4439507/94‑1 (MQ=60)
                                                                                            AAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCCTA   >  SRR4302540.5161229/1‑94 (MQ=60)
                                                                                             AGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGGTGAAATGTTGTTGGCCTAA  >  SRR4302540.2720419/1‑94 (MQ=60)
                                                                                             AGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCCTAA  >  SRR4302540.5809556/1‑94 (MQ=60)
                                                                                             |                                                                                              
TACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGTTGTTGGCCTAA  >  NC_000913/888709‑888895

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: