Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 931,267 T→C T3A (ACG→GCG)  trxB ← thioredoxin reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913931,2670TC92.5% 794.9 / 42.7 296T3A (ACG→GCG) trxBthioredoxin reductase
Reads supporting (aligned to +/- strand):  ref base T (10/12);  new base C (160/113);  total (171/125)
Fisher's exact test for biased strand distribution p-value = 2.66e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.82e-01

Only 100 of 311 total aligned reads displayed.

CAGGTTGCAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGTGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGATTTTGTTA  >  NC_000913/931177‑931356
                                                                                          |                                                                                         
  ggttgcaggttgGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGccc                                                                                       >  2:2493835/1‑93 (MQ=255)
    ttgcaggttgGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCAt                                                                                     >  2:337684/1‑93 (MQ=255)
       caggttgGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATgag                                                                                  <  2:274865/93‑1 (MQ=255)
         ggttgGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGAt                                                                                >  2:6160443/1‑93 (MQ=255)
         ggttgGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGAt                                                                                >  2:8784216/1‑93 (MQ=255)
          gttgGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATc                                                                               >  2:6267428/1‑93 (MQ=255)
           ttgGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATcc                                                                              <  2:7429271/93‑1 (MQ=255)
             ggCGCCCGCCGCGTAGACAGCAGCGGTGCATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATccgc                                                                            >  1:5308300/1‑91 (MQ=255)
              gcgcgcgcCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGTGCCCATGAGATCCCCa                                                                           <  1:59681/93‑1 (MQ=255)
                 cgcgcCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAg                                                                        <  1:6753711/93‑1 (MQ=255)
                 cgcgcCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAg                                                                        >  1:9408834/1‑93 (MQ=255)
                 cgcgcCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAg                                                                        <  1:3512930/93‑1 (MQ=255)
                   cgccgcGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAgtt                                                                      >  2:4093826/1‑93 (MQ=255)
                   cgccgcGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAgtt                                                                      >  1:7714954/1‑93 (MQ=255)
                    gccgcGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAgttg                                                                     >  2:9457424/1‑93 (MQ=255)
                     ccgcGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAgttgt                                                                    <  2:7713851/93‑1 (MQ=255)
                       gcgTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCCTAGttgttg                                                                  >  1:2473871/1‑93 (MQ=255)
                        cgTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTgg                                                                 >  1:1998285/1‑93 (MQ=255)
                         gTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGc                                                                >  2:575034/1‑93 (MQ=255)
                          tAGACAGCAGCGGTGTTTCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCa                                                               >  2:8952694/1‑93 (MQ=255)
                          tAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCa                                                               <  2:730255/93‑1 (MQ=255)
                             aCAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGAc                                                            >  2:7656424/1‑93 (MQ=255)
                               agcagcGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACaa                                                          <  2:5453074/93‑1 (MQ=255)
                               agcagcGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACaa                                                          <  2:6894803/93‑1 (MQ=255)
                                gcagcGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAAt                                                         >  1:3269587/1‑93 (MQ=255)
                                gcagcGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAAt                                                         <  2:2988331/93‑1 (MQ=255)
                                 cagcGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATg                                                        <  1:7148231/93‑1 (MQ=255)
                                    cGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGc                                                     >  2:9183966/1‑93 (MQ=255)
                                      gtgtATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAg                                                   >  1:9478403/1‑93 (MQ=255)
                                        gtATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGa                                                 >  1:5526634/1‑93 (MQ=255)
                                        gtATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGa                                                 >  1:9850102/1‑93 (MQ=255)
                                         tATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGAt                                                >  2:4673570/1‑93 (MQ=255)
                                         tATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGAt                                                <  1:6726141/93‑1 (MQ=255)
                                           tCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTg                                              >  1:6951097/1‑93 (MQ=255)
                                             ccgccgGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTa                                            >  1:3938510/1‑93 (MQ=255)
                                              cgccgGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAg                                           <  1:2275473/93‑1 (MQ=255)
                                               gccgTGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAgg                                          <  2:1254046/93‑1 (MQ=255)
                                                 cgGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGTGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGa                                        <  2:6002224/93‑1 (MQ=255)
                                                  gggCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGaa                                       >  1:8738590/1‑93 (MQ=255)
                                                  gggCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGaa                                       >  1:8063056/1‑93 (MQ=255)
                                                   ggCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAAt                                      >  1:4385274/1‑93 (MQ=255)
                                                    gCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAAtt                                     >  1:6471459/1‑93 (MQ=255)
                                                       tGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTAc                                  >  2:9647214/1‑93 (MQ=255)
                                                       tGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTAc                                  >  1:8443992/1‑93 (MQ=255)
                                                        gAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGGATTTACa                                 >  2:3875094/1‑93 (MQ=255)
                                                        gAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACa                                 <  1:3123280/93‑1 (MQ=255)
                                                         aaCCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGGTTGTAGGGAATTTACAg                                >  1:9047950/1‑93 (MQ=255)
                                                         aaCCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAg                                <  1:4312341/93‑1 (MQ=255)
                                                         aaCCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAg                                <  2:581807/93‑1 (MQ=255)
                                                         aaCCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAg                                <  2:6560768/93‑1 (MQ=255)
                                                         aaCCCAGGATAAGCAGTTTACTGTGTTTGATCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAg                                >  1:1042138/1‑93 (MQ=255)
                                                          aCCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGa                               <  1:3051248/93‑1 (MQ=255)
                                                           cccAGGATAAGCAGTTTACTGTGTTTGGTCGTGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGAc                              >  1:1380458/1‑93 (MQ=255)
                                                           cccAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGAc                              >  2:9874018/1‑93 (MQ=255)
                                                           cccAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGAc                              >  1:2660719/1‑93 (MQ=255)
                                                           cccAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGAc                              >  1:4339286/1‑93 (MQ=255)
                                                              aGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTa                           <  2:414761/93‑1 (MQ=255)
                                                              aGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTa                           >  1:7908085/1‑93 (MQ=255)
                                                                  tAAGCAGTTTACTGTGTTTGGTCGTGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTaaaaa                       >  2:8552960/1‑93 (MQ=255)
                                                                  tAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTaaaaa                       >  2:3673043/1‑93 (MQ=255)
                                                                  tAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTaaaaa                       >  1:9596033/1‑93 (MQ=255)
                                                                  tAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTaaaaa                       >  1:1244102/1‑93 (MQ=255)
                                                                  tAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTaaaaa                       <  2:2002199/93‑1 (MQ=255)
                                                                   aaGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTaaaaaa                      <  2:4481511/93‑1 (MQ=255)
                                                                    ttttgTTTATTGTGTGTGGTCGCGCCCATGAGATCCCAATAGTTGTGGGAAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTaaaaaaa                     <  2:9541254/89‑1 (MQ=255)
                                                                     gCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAag                    <  2:8182658/93‑1 (MQ=255)
                                                                      cAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAaga                   >  1:2791682/1‑93 (MQ=255)
                                                                      cAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAaga                   <  2:5185781/93‑1 (MQ=255)
                                                                       aGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAagag                  >  1:468062/1‑93 (MQ=255)
                                                                       aGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAagag                  >  2:8089835/1‑93 (MQ=255)
                                                                        gTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGt                 >  2:2890572/1‑93 (MQ=255)
                                                                        gTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGt                 <  1:6392370/93‑1 (MQ=255)
                                                                         tttACTGTGTTTGGTCGTGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTa                >  1:1890577/1‑93 (MQ=255)
                                                                         tttACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTa                <  1:8256565/93‑1 (MQ=255)
                                                                         tttACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTa                >  2:5624080/1‑93 (MQ=255)
                                                                         tttACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTa                >  1:1099481/1‑93 (MQ=255)
                                                                         tttACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGAAGTAAAAAAAGAGTa                >  2:2260112/1‑93 (MQ=255)
                                                                          ttACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTAt               <  1:2704657/93‑1 (MQ=255)
                                                                          ttACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTAt               <  1:7559398/93‑1 (MQ=255)
                                                                          ttACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTAt               <  1:619127/93‑1 (MQ=255)
                                                                          ttACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTAt               >  1:4906505/1‑93 (MQ=255)
                                                                           tACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATg              <  2:2374238/93‑1 (MQ=255)
                                                                           tACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATg              <  1:478403/93‑1 (MQ=255)
                                                                           tACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATg              >  2:1494790/1‑93 (MQ=255)
                                                                           tACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGGATg              >  1:2012926/1‑93 (MQ=255)
                                                                            aCTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGa             <  1:4135991/93‑1 (MQ=255)
                                                                             cTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGAc            <  1:160942/93‑1 (MQ=255)
                                                                             cTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGAc            >  2:7040390/1‑93 (MQ=255)
                                                                              tgtgTTTGGTCGTGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACg           >  1:8403865/1‑93 (MQ=255)
                                                                              tgtgTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACg           >  2:2178383/1‑93 (MQ=255)
                                                                               gtgtTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGa          <  2:7413222/93‑1 (MQ=255)
                                                                               gtgtTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGa          >  1:5850411/1‑93 (MQ=255)
                                                                               gtgtTGGGTCGCGCACATGAGTTCCACATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGTAATTTACAGACGTAAAAAAAGAGTATGACGa          <  2:800144/93‑1 (MQ=255)
                                                                                 gtTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGTGAATTTACAGACGTAAAAAAAGAGTATGACGAtt        >  2:8401736/1‑93 (MQ=255)
                                                                                 gtTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACATAAAAAAAGAGTATGACGAtt        >  1:9944034/1‑93 (MQ=255)
                                                                                  tttGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGAttt       <  1:770594/93‑1 (MQ=255)
                                                                                   ttGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGAtttt      <  2:3565929/93‑1 (MQ=255)
                                                                                     ggTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGATTTTGt    >  2:50768/1‑93 (MQ=255)
                                                                                     ggTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGATTTTGt    <  1:7388911/93‑1 (MQ=255)
                                                                                       tCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGATTTTGTTa  >  1:2298356/1‑93 (MQ=255)
                                                                                          |                                                                                         
CAGGTTGCAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGTGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGATTTTGTTA  >  NC_000913/931177‑931356

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCACAGGTTGCAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGTGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGATTTTGTTAACA  >  NC_000913/931174‑931359
                                                                                             |                                                                                            
GCACAGGTTGCAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGC                                                                                              >  SRR4302540.9733628/1‑94 (MQ=60)
GCACAGGTTGCAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGC                                                                                              >  SRR4302540.5195911/1‑94 (MQ=60)
 CACAGGTTGCAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCG                                                                                             >  SRR4302540.9020345/1‑94 (MQ=60)
 CACAGGTTGCAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCG                                                                                             >  SRR4302540.6618378/1‑94 (MQ=60)
 CACAGGTTGCAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCG                                                                                             >  SRR4302540.7689436/1‑94 (MQ=60)
  ACAGGTTGCAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGTGC                                                                                            >  SRR4302540.3735040/1‑94 (MQ=60)
  ACAGGTTGCAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGTGC                                                                                            >  SRR4302540.1545004/1‑94 (MQ=60)
  ACAGGTTGCAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGC                                                                                            >  SRR4302540.8505993/1‑94 (MQ=60)
  ACAGGTTGCAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGC                                                                                            >  SRR4302540.2494604/1‑94 (MQ=60)
  ACAGGTTGCAGGTTGCGGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGC                                                                                            <  SRR4302540.2509503/94‑1 (MQ=60)
   CAGGTTGCAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCC                                                                                           >  SRR4302540.7437913/1‑94 (MQ=60)
    AGGTTGCAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCC                                                                                          >  SRR4302540.1918575/1‑94 (MQ=60)
     GGTTGCAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCA                                                                                         >  SRR4302540.4373974/1‑94 (MQ=60)
       TTGCAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATG                                                                                       >  SRR4302540.1163928/1‑94 (MQ=60)
         GCAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAG                                                                                     >  SRR4302540.8050621/1‑94 (MQ=60)
          CAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGA                                                                                    <  SRR4302540.7590648/94‑1 (MQ=60)
          CAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGA                                                                                    <  SRR4302540.9971215/94‑1 (MQ=60)
            GGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATC                                                                                  >  SRR4302540.1279664/1‑94 (MQ=60)
            GGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATC                                                                                  >  SRR4302540.1279665/1‑94 (MQ=60)
            GGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGGATCCCGCCGTGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATC                                                                                  >  SRR4302540.2260345/1‑94 (MQ=60)
             GTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCC                                                                                 <  SRR4302540.6751593/94‑1 (MQ=60)
               TGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCC                                                                               >  SRR4302540.5366397/1‑94 (MQ=60)
               TGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCC                                                                               >  SRR4302540.7099877/1‑94 (MQ=60)
               TGGCGCCCGCCGCGTAGACAGCAGCGGTGCATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCGC                                                                               >  SRR4302540.5366396/1‑94 (MQ=60)
                GGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGGTTACTGTGTTTGGTCGGGCCCATGAGATCCCCA                                                                              >  SRR4302540.557287/1‑94 (MQ=60)
                 GCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGTGCCCATGAGATCCCCAT                                                                             <  SRR4302540.60287/94‑1 (MQ=60)
                 GCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCAT                                                                             <  SRR4302540.9584169/94‑1 (MQ=60)
                 GCGCGCGCCGCGTAGACAGCAGCAGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGTGCCCATGAGATCCCCAT                                                                             <  SRR4302540.60286/94‑1 (MQ=60)
                  CGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATA                                                                            >  SRR4302540.1947593/1‑94 (MQ=60)
                   GCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAG                                                                           >  SRR4302540.9520719/1‑94 (MQ=60)
                    CGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGT                                                                          >  SRR4302540.5085019/1‑94 (MQ=60)
                    CGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGT                                                                          <  SRR4302540.3551198/94‑1 (MQ=60)
                    CGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGT                                                                          <  SRR4302540.6828337/94‑1 (MQ=60)
                     GCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTT                                                                         >  SRR4302540.7803951/1‑94 (MQ=60)
                     GCGCCGCGAAGACAGCAGCGGTGTATCACGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTT                                                                         >  SRR4302540.7803952/1‑94 (MQ=60)
                         CGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCCTAGTTGTTG                                                                     >  SRR4302540.2500503/1‑94 (MQ=60)
                         CGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTG                                                                     >  SRR4302540.2794525/1‑94 (MQ=60)
                         CGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTG                                                                     <  SRR4302540.6207359/94‑1 (MQ=60)
                         CGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTG                                                                     >  SRR4302540.9244712/1‑94 (MQ=60)
                          GCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGG                                                                    >  SRR4302540.2019930/1‑94 (MQ=60)
                           CGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGC                                                                   <  SRR4302540.2748315/94‑1 (MQ=60)
                            GTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCA                                                                  >  SRR4302540.2326151/1‑94 (MQ=60)
                              AGACAGCAGCGGTGTTCCCCGCCGGGCCTTAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGTGCCCATGAGATCCCCATAGTTGTTGGCAGA                                                                <  SRR4302540.7500620/94‑1 (MQ=60)
                              AGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGA                                                                >  SRR4302540.8190803/1‑94 (MQ=60)
                               GACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGAC                                                               >  SRR4302540.4071446/1‑94 (MQ=60)
                               GACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGAC                                                               >  SRR4302540.3722325/1‑94 (MQ=60)
                                 CAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAA                                                             >  SRR4302540.2672953/1‑94 (MQ=60)
                                 CAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAA                                                             <  SRR4302540.410996/94‑1 (MQ=60)
                                  AGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGTGCCCATGAGATCCCCATAGTTGTTGGCAGACAAT                                                            <  SRR4302540.8532869/94‑1 (MQ=60)
                                  AGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAAT                                                            <  SRR4302540.2943805/94‑1 (MQ=60)
                                  AGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAAT                                                            >  SRR4302540.3305271/1‑94 (MQ=60)
                                  AGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAAT                                                            <  SRR4302540.5776002/94‑1 (MQ=60)
                                  AGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAAT                                                            <  SRR4302540.615959/94‑1 (MQ=60)
                                    CAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGG                                                          <  SRR4302540.7227885/94‑1 (MQ=60)
                                    CAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGG                                                          >  SRR4302540.312412/1‑94 (MQ=60)
                                    CAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGG                                                          <  SRR4302540.7233915/94‑1 (MQ=60)
                                     AGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGG                                                         >  SRR4302540.3533572/1‑94 (MQ=60)
                                     AGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGG                                                         <  SRR4302540.2718629/94‑1 (MQ=60)
                                     AGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGG                                                         >  SRR4302540.9258333/1‑94 (MQ=60)
                                       CGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCA                                                       >  SRR4302540.1811238/1‑94 (MQ=60)
                                        GGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAG                                                      >  SRR4302540.9590804/1‑94 (MQ=60)
                                        GGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAG                                                      <  SRR4302540.4050802/94‑1 (MQ=60)
                                          TGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGA                                                    >  SRR4302540.5587498/1‑94 (MQ=60)
                                          TGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGA                                                    >  SRR4302540.9965235/1‑94 (MQ=60)
                                           GTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGAT                                                   <  SRR4302540.4180897/94‑1 (MQ=60)
                                            TATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATT                                                  <  SRR4302540.6800391/94‑1 (MQ=60)
                                            TATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATT                                                  <  SRR4302540.7826436/94‑1 (MQ=60)
                                             ATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTG                                                 >  SRR4302540.7028436/1‑94 (MQ=60)
                                              TCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGT                                                >  SRR4302540.2030204/1‑94 (MQ=60)
                                               CCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTA                                               >  SRR4302540.3981063/1‑94 (MQ=60)
                                                 CGCCTGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGG                                             <  SRR4302540.6509775/94‑1 (MQ=60)
                                                 CGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGG                                             <  SRR4302540.2299906/94‑1 (MQ=60)
                                                 CGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGG                                             <  SRR4302540.4958775/94‑1 (MQ=60)
                                                   CCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGCTGGCAGACAATGGGCAGGATTGTAGGGA                                           >  SRR4302540.9039775/1‑94 (MQ=60)
                                                    CGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAA                                          >  SRR4302540.5683361/1‑94 (MQ=60)
                                                    CGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAA                                          >  SRR4302540.1086803/1‑94 (MQ=60)
                                                    CGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAA                                          >  SRR4302540.8156640/1‑94 (MQ=60)
                                                    CGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAA                                          >  SRR4302540.8840039/1‑94 (MQ=60)
                                                     GGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAAT                                         >  SRR4302540.4432885/1‑94 (MQ=60)
                                                      GGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATT                                        >  SRR4302540.6543464/1‑94 (MQ=60)
                                                       GCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTT                                       <  SRR4302540.6812930/94‑1 (MQ=60)
                                                       GCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTT                                       >  SRR4302540.1192262/1‑94 (MQ=60)
                                                       GCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTT                                       >  SRR4302540.986405/1‑94 (MQ=60)
                                                       GCCTGAACCCAGGATAAGCAGTTGACTGTGTTGGGCCGCGCCCATGAGATCCCCATATTTGTTGGCAGACAATGGTCAGGATTGTAGGGAATTT                                       <  SRR4302540.6812929/94‑1 (MQ=60)
                                                         CTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTAC                                     >  SRR4302540.8542015/1‑94 (MQ=60)
                                                         CTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTAC                                     <  SRR4302540.699210/94‑1 (MQ=60)
                                                         CTGAACCCAGGACAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTAC                                     >  SRR4302540.8542018/1‑94 (MQ=60)
                                                          TGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACA                                    >  SRR4302540.705192/1‑94 (MQ=60)
                                                           GAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGGTTGTAGGGAATTTACAG                                   >  SRR4302540.9156569/1‑94 (MQ=60)
                                                           GAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAG                                   <  SRR4302540.5235242/94‑1 (MQ=60)
                                                           GAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAG                                   <  SRR4302540.3157397/94‑1 (MQ=60)
                                                           GAACCCAGGATAAGCAGTTTACTGTGTTTGATCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAG                                   >  SRR4302540.1052734/1‑94 (MQ=60)
                                                            AACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGA                                  <  SRR4302540.4359292/94‑1 (MQ=60)
                                                            AACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGA                                  <  SRR4302540.2506779/94‑1 (MQ=60)
                                                            AACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGA                                  >  SRR4302540.2321627/1‑94 (MQ=60)
                                                             ACCCAGGATAAGCAGTTTACTGTGTTTGGTCGTGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGAC                                 >  SRR4302540.1395184/1‑94 (MQ=60)
                                                             ACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGAC                                 <  SRR4302540.3084728/94‑1 (MQ=60)
                                                             ACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGAC                                 >  SRR4302540.2689582/1‑94 (MQ=60)
                                                             ACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGAC                                 >  SRR4302540.2020044/1‑94 (MQ=60)
                                                             ACCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGAC                                 >  SRR4302540.4386525/1‑94 (MQ=60)
                                                              CCCAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACG                                >  SRR4302540.6444295/1‑94 (MQ=60)
                                                              CCCAGGATAAGCAGTTTACTATGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACG                                >  SRR4302540.215760/1‑94 (MQ=60)
                                                                CAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTA                              >  SRR4302540.2384784/1‑94 (MQ=60)
                                                                CAGGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTA                              >  SRR4302540.8000299/1‑94 (MQ=60)
                                                                  GGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAA                            <  SRR4302540.8009099/94‑1 (MQ=60)
                                                                  GGATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAA                            >  SRR4302540.4396827/1‑94 (MQ=60)
                                                                   GATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAA                           <  SRR4302540.6335079/94‑1 (MQ=60)
                                                                   GATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAA                           >  SRR4302540.8632956/1‑94 (MQ=60)
                                                                    ATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAA                          >  SRR4302540.5830950/1‑94 (MQ=60)
                                                                    ATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAA                          >  SRR4302540.3250248/1‑94 (MQ=60)
                                                                    ATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAA                          <  SRR4302540.4697290/94‑1 (MQ=60)
                                                                    ATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAA                          <  SRR4302540.8248820/94‑1 (MQ=60)
                                                                    ATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAA                          >  SRR4302540.9709266/1‑94 (MQ=60)
                                                                    ATAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAA                          >  SRR4302540.1256794/1‑94 (MQ=60)
                                                                     TAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAA                         <  SRR4302540.8379158/94‑1 (MQ=60)
                                                                     TAAGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAA                         <  SRR4302540.4747986/94‑1 (MQ=60)
                                                                       AGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAG                       >  SRR4302540.9130708/1‑94 (MQ=60)
                                                                       AGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAG                       <  SRR4302540.1541614/94‑1 (MQ=60)
                                                                       AGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAG                       <  SRR4302540.7797709/94‑1 (MQ=60)
                                                                       AGCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAG                       <  SRR4302540.7797708/94‑1 (MQ=60)
                                                                        GCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGA                      <  SRR4302540.4742542/94‑1 (MQ=60)
                                                                        GCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGA                      >  SRR4302540.2821824/1‑94 (MQ=60)
                                                                        GCAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGA                      >  SRR4302540.2821823/1‑94 (MQ=60)
                                                                         CAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAG                     >  SRR4302540.9820812/1‑94 (MQ=60)
                                                                         CAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAG                     >  SRR4302540.7708952/1‑94 (MQ=60)
                                                                         CAGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAG                     >  SRR4302540.473069/1‑94 (MQ=60)
                                                                          AGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGT                    <  SRR4302540.4922909/94‑1 (MQ=60)
                                                                          AGTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGAAGTAAAAAAAGAGT                    >  SRR4302540.9973468/1‑94 (MQ=60)
                                                                           GTTTACTGTGTTTGGTCGTGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTA                   >  SRR4302540.1911272/1‑94 (MQ=60)
                                                                           GTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAagc                   >  SRR4302540.9654159/1‑91 (MQ=60)
                                                                           GTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTA                   <  SRR4302540.6463529/94‑1 (MQ=60)
                                                                           GTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTA                   >  SRR4302540.1110803/1‑94 (MQ=60)
                                                                           GTTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTA                   >  SRR4302540.4428285/1‑94 (MQ=60)
                                                                            TTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTAT                  >  SRR4302540.4959318/1‑94 (MQ=60)
                                                                            TTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTAT                  <  SRR4302540.6889509/94‑1 (MQ=60)
                                                                            TTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTAT                  <  SRR4302540.8352519/94‑1 (MQ=60)
                                                                            TTTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTAT                  <  SRR4302540.8420572/94‑1 (MQ=60)
                                                                             TTACTGTGTTTGGTCGTGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATG                 <  SRR4302540.189384/94‑1 (MQ=60)
                                                                             TTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATG                 <  SRR4302540.625722/94‑1 (MQ=60)
                                                                             TTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATG                 <  SRR4302540.6476008/94‑1 (MQ=60)
                                                                             TTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATG                 <  SRR4302540.425455/94‑1 (MQ=60)
                                                                             TTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATG                 <  SRR4302540.2733832/94‑1 (MQ=60)
                                                                             TTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATG                 <  SRR4302540.7644174/94‑1 (MQ=60)
                                                                             TTACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGGATG                 >  SRR4302540.2034689/1‑94 (MQ=60)
                                                                              TACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGA                <  SRR4302540.483526/94‑1 (MQ=60)
                                                                              TACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGA                <  SRR4302540.3178129/94‑1 (MQ=60)
                                                                               TCTGTGTGTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGAC               <  SRR4302540.1102393/94‑1 (MQ=60)
                                                                               ACTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGAC               <  SRR4302540.4180740/94‑1 (MQ=60)
                                                                                CTGTGTTTGGTCGTGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACG              >  SRR4302540.8501412/1‑94 (MQ=60)
                                                                                CTGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACG              <  SRR4302540.162562/94‑1 (MQ=60)
                                                                                 TGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGA             >  SRR4302540.5915113/1‑94 (MQ=60)
                                                                                 TGTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGA             >  SRR4302540.5915114/1‑94 (MQ=60)
                                                                                  GTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGAT            >  SRR4302540.7298452/1‑94 (MQ=60)
                                                                                  GTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGAT            >  SRR4302540.4579015/1‑94 (MQ=60)
                                                                                  GTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGAT            >  SRR4302540.4362479/1‑94 (MQ=60)
                                                                                  GTGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGAT            >  SRR4302540.9623867/1‑94 (MQ=60)
                                                                                   TGTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACATAAAAAAAGAGTATGACGATT           >  SRR4302540.10060158/1‑94 (MQ=60)
                                                                                    GTTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGTGTAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGATTT          >  SRR4302540.7764383/1‑94 (MQ=60)
                                                                                     TTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGATTTT         >  SRR4302540.856564/1‑94 (MQ=60)
                                                                                     TTTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGATTTT         <  SRR4302540.778794/94‑1 (MQ=60)
                                                                                      TTGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGATTTTG        <  SRR4302540.6550119/94‑1 (MQ=60)
                                                                                       TGGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGATTTTGT       >  SRR4302540.3098487/1‑94 (MQ=60)
                                                                                        GGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGATTTTGTT      <  SRR4302540.7471240/94‑1 (MQ=60)
                                                                                        GGTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGAATGACGATTTTGTA      >  SRR4302540.3470464/1‑94 (MQ=60)
                                                                                         GTCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGATTTTGTTA     >  SRR4302540.2323086/1‑94 (MQ=60)
                                                                                          TCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAACAAAAGAGTATGACGATTTTGTTAA    >  SRR4302540.1774440/1‑94 (MQ=60)
                                                                                          TCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGATTTTGTTAA    >  SRR4302540.1774442/1‑94 (MQ=60)
                                                                                          TCGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGATTTTGTTAA    <  SRR4302540.2318224/94‑1 (MQ=60)
                                                                                           CGCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGATTTTGTTAAC   <  SRR4302540.3908982/94‑1 (MQ=60)
                                                                                            GCGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGATTTTGTTAACA  >  SRR4302540.152199/1‑94 (MQ=60)
                                                                                            GCGCCAATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGATTTTGTTAACA  <  SRR4302540.5279966/94‑1 (MQ=60)
                                                                                             |                                                                                            
GCACAGGTTGCAGGTTGGCGCGCGCCGCGTAGACAGCAGCGGTGTATCCCGCCGGGCCTGAACCCAGGATAAGCAGTTTACTGTGTTTGGTCGTGCCCATGAGATCCCCATAGTTGTTGGCAGACAATGGGCAGGATTGTAGGGAATTTACAGACGTAAAAAAAGAGTATGACGATTTTGTTAACA  >  NC_000913/931174‑931359

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑