Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,091,304	T→C	D70G (GAC→GGC)	ycdS ←	putative outer membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,091,304	0	T	C	100.0%	1011.0 / NA	311	D70G (GAC→GGC)	ycdS	putative outer membrane protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (151/160); total (151/160)

Only 100 of 330 total aligned reads displayed.

CCACGCGCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGTCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAAT  >  NC_000913/1091214‑1091393

ccACGCGCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCa                                                                                         <  1:6404502/93‑1 (MQ=255)

      gcTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAAtt                                                                                   >  2:4808797/1‑93 (MQ=255)

       cTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAAttt                                                                                  >  2:5289694/1‑93 (MQ=255)

       cTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAAttt                                                                                  <  2:2224715/93‑1 (MQ=255)

       cTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAAttt                                                                                  <  1:3707452/93‑1 (MQ=255)

         ggTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTgg                                                                                >  2:9806142/1‑93 (MQ=255)

          gTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGt                                                                               <  2:690243/93‑1 (MQ=255)

            aaTTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTa                                                                             <  2:7237216/93‑1 (MQ=255)

            aaTGGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTa                                                                             <  1:9378464/93‑1 (MQ=255)

             aTTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTAt                                                                            >  1:9794210/1‑93 (MQ=255)

             aTTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTAt                                                                            <  2:4168399/93‑1 (MQ=255)

             aTTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTAt                                                                            <  2:3380267/93‑1 (MQ=255)

              ttGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTAtt                                                                           <  2:1341638/93‑1 (MQ=255)

              ttGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTAtt                                                                           >  1:10000314/1‑93 (MQ=255)

               tGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTg                                                                          <  1:9267691/93‑1 (MQ=255)

               tGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTg                                                                          <  2:583763/93‑1 (MQ=255)

                   gatgaCGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGa                                                                      <  2:2951667/93‑1 (MQ=255)

                   gatgaCGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGa                                                                      <  2:5702521/93‑1 (MQ=255)

                     tgaCGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGt                                                                    <  1:9011176/93‑1 (MQ=255)

                      gaCGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTg                                                                   <  1:8271882/93‑1 (MQ=255)

                       aCGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGc                                                                  >  1:695256/1‑93 (MQ=255)

                       aCGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGc                                                                  >  1:5611069/1‑93 (MQ=255)

                       aCGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGc                                                                  <  2:891619/93‑1 (MQ=255)

                        cGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCt                                                                 <  1:7877200/93‑1 (MQ=255)

                         ggTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTg                                                                <  2:2634958/93‑1 (MQ=255)

                          gTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGa                                                               >  1:5368100/1‑93 (MQ=255)

                          gTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGa                                                               >  2:279317/1‑93 (MQ=255)

                          gTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGa                                                               >  1:226954/1‑93 (MQ=255)

                          gTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGa                                                               >  1:4845888/1‑93 (MQ=255)

                           tAGCGGTTGTAAACGGTAATAACCTGTTTATCATGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGAt                                                              >  2:6156150/1‑93 (MQ=255)

                            aGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGAtt                                                             <  2:172832/93‑1 (MQ=255)

                             gCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGAttt                                                            >  1:9483060/1‑93 (MQ=255)

                             gCGGTTGTAAACGGTAATAACCTGTTTATCTTGCACGGCCCATAAGGAAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGAttt                                                            >  2:6052755/1‑93 (MQ=255)

                              cGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGAtttt                                                           <  1:3373190/93‑1 (MQ=255)

                              cGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGAtttt                                                           >  1:8645385/1‑93 (MQ=255)

                              cGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGAtttt                                                           <  2:948245/93‑1 (MQ=255)

                               ggTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTa                                                          <  1:1527162/93‑1 (MQ=255)

                                  tGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTg                                                       >  2:367388/1‑93 (MQ=255)

                                     aaaCGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCaa                                                    >  1:96304/1‑93 (MQ=255)

                                      aaCGGTAATAACCTGTTTATCTTGCCCGGCCCATAAAGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCaaa                                                   >  1:2843075/1‑93 (MQ=255)

                                       aCGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAAc                                                  <  2:7456296/93‑1 (MQ=255)

                                         ggTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCa                                                >  2:1516877/1‑93 (MQ=255)

                                         ggTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCa                                                <  2:4014056/93‑1 (MQ=255)

                                          gTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCAt                                               >  2:2442523/1‑93 (MQ=255)

                                            aataaCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGa                                             >  2:9656827/1‑93 (MQ=255)

                                             ataaCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGAc                                            <  2:8583824/93‑1 (MQ=255)

                                             ataaCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGAc                                            <  2:3024321/93‑1 (MQ=255)

                                               aaCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATCACaa                                          >  1:3963607/1‑93 (MQ=255)

                                                aCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACaaa                                         >  1:3883689/1‑93 (MQ=255)

                                                  cTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgc                                       <  2:7621655/93‑1 (MQ=255)

                                                   tGTTTATCTTGCGCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgct                                      <  1:9944752/93‑1 (MQ=255)

                                                   tGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgct                                      <  1:6605999/93‑1 (MQ=255)

                                                   tGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgct                                      <  2:9211229/93‑1 (MQ=255)

                                                    gTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgctg                                     >  1:1306855/1‑93 (MQ=255)

                                                       tATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACACAgctggct                                  >  1:617837/1‑93 (MQ=255)

                                                       tATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgctggct                                  >  1:3051342/1‑93 (MQ=255)

                                                       tATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgctggct                                  >  1:5006197/1‑93 (MQ=255)

                                                         tCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGa                                <  1:1920311/93‑1 (MQ=255)

                                                         tCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGa                                <  2:4607597/93‑1 (MQ=255)

                                                         tCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGa                                <  1:4129474/93‑1 (MQ=255)

                                                         tCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGa                                <  1:1384836/93‑1 (MQ=255)

                                                          cTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAg                               <  2:6716024/93‑1 (MQ=255)

                                                          cTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAg                               <  1:1256021/93‑1 (MQ=255)

                                                           ttGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGt                              >  1:9080600/1‑93 (MQ=255)

                                                            tGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTa                             <  1:7079850/93‑1 (MQ=255)

                                                            tGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTa                             <  1:8771465/93‑1 (MQ=255)

                                                            tGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTa                             <  2:5735415/93‑1 (MQ=255)

                                                               ccGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTa                          >  1:5295184/1‑93 (MQ=255)

                                                                cGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTAc                         <  1:9557166/93‑1 (MQ=255)

                                                                 ggCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTAcc                        >  1:7575355/1‑93 (MQ=255)

                                                                 ggCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTAcc                        >  2:3286324/1‑93 (MQ=255)

                                                                   cccATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCt                      <  2:6449931/93‑1 (MQ=255)

                                                                    ccATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCtt                     <  1:425424/93‑1 (MQ=255)

                                                                     cATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTg                    >  1:2604293/1‑93 (MQ=255)

                                                                      aTAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGc                   >  1:9752087/1‑93 (MQ=255)

                                                                      aTAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGc                   >  2:4322959/1‑93 (MQ=255)

                                                                      aTAAGGCAATCTGTAAAAAGCCAGCAAGTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGc                   <  1:5184164/93‑1 (MQ=255)

                                                                       tAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCg                  >  1:51789/1‑93 (MQ=255)

                                                                       tAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCg                  >  2:8329107/1‑93 (MQ=255)

                                                                       tAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCg                  <  2:6623377/93‑1 (MQ=255)

                                                                       tAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCg                  >  2:7762906/1‑93 (MQ=255)

                                                                       tAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCg                  >  1:7101865/1‑93 (MQ=255)

                                                                        aaGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGa                 <  2:1872756/93‑1 (MQ=255)

                                                                        aaGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTCGCGa                 >  2:9116815/1‑93 (MQ=255)

                                                                        aaGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGAATTACCCTTGCGa                 >  1:4432459/1‑93 (MQ=255)

                                                                         aGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAg                >  2:2135089/1‑93 (MQ=255)

                                                                         aGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAg                >  1:7419347/1‑93 (MQ=255)

                                                                         aGGCAATCTGTAACCAGCCAGCAATTTGGGTATTGCTGAATGCTGATTTTAGTGCAAACCATGCCATAGCTGGCTGAGTATTCCACTTGCGAg                >  2:4921232/1‑93 (MQ=255)

                                                                            cAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCtt             <  1:2454447/93‑1 (MQ=255)

                                                                               tCTGTAACCAGCCAGCAATTTTGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaa          <  1:6804086/93‑1 (MQ=255)

                                                                               tCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaa          >  1:7208380/1‑93 (MQ=255)

                                                                                cTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaat         <  2:8437698/93‑1 (MQ=255)

                                                                                 tGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaata        >  2:4393217/1‑93 (MQ=255)

                                                                                  gTAACCAGCTAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaataa       <  2:1096182/93‑1 (MQ=255)

                                                                                   tAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaataat      >  1:8334302/1‑93 (MQ=255)

                                                                                    aaCCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATc     <  1:2750826/93‑1 (MQ=255)

                                                                                    aaCCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATc     <  1:1711001/93‑1 (MQ=255)

                                                                                    aaCCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATc     <  2:4436562/93‑1 (MQ=255)

                                                                                    aaCCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATc     <  2:3205986/93‑1 (MQ=255)

                                                                                      ccagccagCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCaa   >  2:4270058/1‑93 (MQ=255)

CCACGCGCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGTCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAAT  >  NC_000913/1091214‑1091393

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AACCACGCGCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGTCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAATGCAT  >  NC_000913/1091212‑1091397

AACCACGCGCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCC                                                                                              <  SRR4302540.5863533/94‑1 (MQ=60)

  CCACGCGCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAG                                                                                            >  SRR4302540.6882344/1‑94 (MQ=60)

  CCACGCGCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAG                                                                                            <  SRR4302540.6475791/94‑1 (MQ=60)

    ACGCGCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCA                                                                                          >  SRR4302540.2563112/1‑94 (MQ=60)

    ACGCGCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCA                                                                                          <  SRR4302540.9164579/94‑1 (MQ=60)

      GCGCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAAT                                                                                        <  SRR4302540.4644526/94‑1 (MQ=60)

       CGCTTGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATT                                                                                       <  SRR4302540.7884780/94‑1 (MQ=60)

         CTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTG                                                                                     <  SRR4302540.3747913/94‑1 (MQ=60)

          TGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGG                                                                                    >  SRR4302540.3364369/1‑94 (MQ=60)

            GTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTT                                                                                  <  SRR4302540.2656992/94‑1 (MQ=60)

            GTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTT                                                                                  <  SRR4302540.523837/94‑1 (MQ=60)

             TAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTA                                                                                 >  SRR4302540.9336125/1‑94 (MQ=60)

              AATTGCTGATGACGGTAGCGGTTGTAAACGGTACTAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTAT                                                                                <  SRR4302540.9823882/94‑1 (MQ=60)

              AATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTAT                                                                                <  SRR4302540.9521615/94‑1 (MQ=60)

              AATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTAT                                                                                <  SRR4302540.2398114/94‑1 (MQ=60)

              AATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTAT                                                                                <  SRR4302540.3941309/94‑1 (MQ=60)

              AATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTAT                                                                                >  SRR4302540.8438221/1‑94 (MQ=60)

              AATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTAT                                                                                >  SRR4302540.9908929/1‑94 (MQ=60)

              AATGGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTAT                                                                                <  SRR4302540.9490104/94‑1 (MQ=60)

               ATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATT                                                                               >  SRR4302540.10116818/1‑94 (MQ=60)

               ATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATT                                                                               <  SRR4302540.4287349/94‑1 (MQ=60)

               ATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATT                                                                               <  SRR4302540.2010733/94‑1 (MQ=60)

                TTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTG                                                                              >  SRR4302540.9700806/1‑94 (MQ=60)

                TTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTG                                                                              >  SRR4302540.9700805/1‑94 (MQ=60)

                 TGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGC                                                                             <  SRR4302540.9378527/94‑1 (MQ=60)

                  GCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCT                                                                            <  SRR4302540.230821/94‑1 (MQ=60)

                   CTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTG                                                                           >  SRR4302540.9866697/1‑94 (MQ=60)

                   CTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTG                                                                           >  SRR4302540.9866696/1‑94 (MQ=60)

                    TGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGA                                                                          >  SRR4302540.2913083/1‑94 (MQ=60)

                    TGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGA                                                                          >  SRR4302540.4426084/1‑94 (MQ=60)

                     GATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAG                                                                         <  SRR4302540.6165168/94‑1 (MQ=60)

                     GATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAG                                                                         <  SRR4302540.9937444/94‑1 (MQ=60)

                      ATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGT                                                                        <  SRR4302540.8819826/94‑1 (MQ=60)

                      ATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGT                                                                        <  SRR4302540.3386396/94‑1 (MQ=60)

                      ATGACGGTAGCAGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCATCAATTTGGTTATTGCTGAGT                                                                        <  SRR4302540.8819825/94‑1 (MQ=60)

                       TGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTG                                                                       <  SRR4302540.9119277/94‑1 (MQ=60)

                        GACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGC                                                                      <  SRR4302540.6871562/94‑1 (MQ=60)

                        GACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGC                                                                      >  SRR4302540.5672796/1‑94 (MQ=60)

                        GACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGC                                                                      >  SRR4302540.702717/1‑94 (MQ=60)

                        GACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGC                                                                      >  SRR4302540.702718/1‑94 (MQ=60)

                        GACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGC                                                                      <  SRR4302540.8367984/94‑1 (MQ=60)

                          CGTTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTG‑CCGGCCCGTAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGA                                                                   <  SRR4302540.9831861/94‑1 (MQ=60)

                          CGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTG                                                                    <  SRR4302540.7969203/94‑1 (MQ=60)

                          CGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTG                                                                    <  SRR4302540.2484874/94‑1 (MQ=60)

                          CGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTG                                                                    <  SRR4302540.9440427/94‑1 (MQ=60)

                           GGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCTCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGA                                                                   >  SRR4302540.283169/1‑94 (MQ=60)

                           GGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGA                                                                   >  SRR4302540.4897801/1‑94 (MQ=60)

                           GGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGA                                                                   >  SRR4302540.5207308/1‑94 (MQ=60)

                           GGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGA                                                                   <  SRR4302540.5281748/94‑1 (MQ=60)

                           GGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGA                                                                   >  SRR4302540.5427088/1‑94 (MQ=60)

                           GGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGA                                                                   >  SRR4302540.229146/1‑94 (MQ=60)

                            GTAGCGGTTGTAAACGGTAATAACCTGTTTTTCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTTCTGAGTGCTGAT                                                                  >  SRR4302540.9043857/1‑94 (MQ=60)

                            GTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGAT                                                                  >  SRR4302540.10013437/1‑94 (MQ=60)

                            GTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGAT                                                                  >  SRR4302540.2855004/1‑94 (MQ=60)

                              AGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTT                                                                >  SRR4302540.9595504/1‑94 (MQ=60)

                               GCGTTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTT                                                               <  SRR4302540.1461164/94‑1 (MQ=60)

                               GCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTT                                                               >  SRR4302540.8745815/1‑94 (MQ=60)

                               GCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTT                                                               >  SRR4302540.5774829/1‑94 (MQ=60)

                               GCGGTTGTAAACGATAATATCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTT                                                               <  SRR4302540.1461162/94‑1 (MQ=60)

                                CGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTA                                                              <  SRR4302540.3410058/94‑1 (MQ=60)

                                 GGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAG                                                             <  SRR4302540.1544077/94‑1 (MQ=60)

                                 GGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAG                                                             >  SRR4302540.4090692/1‑94 (MQ=60)

                                  GTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGT                                                            <  SRR4302540.6861810/94‑1 (MQ=60)

                                     GTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCA                                                         >  SRR4302540.3671951/1‑94 (MQ=60)

                                      TAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAA                                                        <  SRR4302540.4519220/94‑1 (MQ=60)

                                      TAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAA                                                        >  SRR4302540.97326/1‑94 (MQ=60)

                                       AAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAA                                                       >  SRR4302540.10161094/1‑94 (MQ=60)

                                       AAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAAGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAA                                                       >  SRR4302540.2873839/1‑94 (MQ=60)

                                        AACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAAC                                                      <  SRR4302540.4898789/94‑1 (MQ=60)

                                        AACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAAC                                                      <  SRR4302540.7179495/94‑1 (MQ=60)

                                          CGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTGACCAGCCAGCAATTAGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCA                                                    >  SRR4302540.5391263/1‑94 (MQ=60)

                                          CGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCA                                                    >  SRR4302540.5391262/1‑94 (MQ=60)

                                           GGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCAT                                                   <  SRR4302540.4872446/94‑1 (MQ=60)

                                           GGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCAT                                                   <  SRR4302540.3824811/94‑1 (MQ=60)

                                           GGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCAT                                                   <  SRR4302540.3047657/94‑1 (MQ=60)

                                           GGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCAT                                                   <  SRR4302540.9142956/94‑1 (MQ=60)

                                           GGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCAT                                                   >  SRR4302540.7455104/1‑94 (MQ=60)

                                            GTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATG                                                  <  SRR4302540.3766545/94‑1 (MQ=60)

                                            GTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATG                                                  >  SRR4302540.9223590/1‑94 (MQ=60)

                                             TAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGA                                                 >  SRR4302540.2757564/1‑94 (MQ=60)

                                              AATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGAC                                                <  SRR4302540.6368715/94‑1 (MQ=60)

                                               ATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACA                                               >  SRR4302540.3493467/1‑94 (MQ=60)

                                                TAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAA                                              <  SRR4302540.1806296/94‑1 (MQ=60)

                                                TAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATCACAA                                              >  SRR4302540.4006349/1‑94 (MQ=60)

                                                 AACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAA                                             >  SRR4302540.3925881/1‑94 (MQ=60)

                                                 AACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAA                                             <  SRR4302540.1281146/94‑1 (MQ=60)

                                                  ACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAG                                            >  SRR4302540.1905175/1‑94 (MQ=60)

                                                  ACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAG                                            >  SRR4302540.1363606/1‑94 (MQ=60)

                                                   CCTGTTTATCTTGCCCGTCCCATAAGTCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACATAGC                                           >  SRR4302540.1486520/1‑94 (MQ=60)

                                                   CCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGC                                           >  SRR4302540.5133465/1‑94 (MQ=60)

                                                     TGTTTATCTTGCGCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTG                                         <  SRR4302540.10060881/94‑1 (MQ=60)

                                                     TGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTG                                         <  SRR4302540.6679149/94‑1 (MQ=60)

                                                     TGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTG                                         >  SRR4302540.1320414/1‑94 (MQ=60)

                                                     TGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTG                                         >  SRR4302540.1320415/1‑94 (MQ=60)

                                                        TTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACACAGCTGGCT                                      >  SRR4302540.624422/1‑94 (MQ=60)

                                                        TTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCT                                      >  SRR4302540.3084822/1‑94 (MQ=60)

                                                        TTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCT                                      >  SRR4302540.2203364/1‑94 (MQ=60)

                                                        TTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCT                                      >  SRR4302540.5060419/1‑94 (MQ=60)

                                                           TCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAG                                   <  SRR4302540.5296738/94‑1 (MQ=60)

                                                           TCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAG                                   <  SRR4302540.1399639/94‑1 (MQ=60)

                                                           TCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAG                                   <  SRR4302540.4174114/94‑1 (MQ=60)

                                                           TCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAG                                   <  SRR4302540.7475747/94‑1 (MQ=60)

                                                           TCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAG                                   <  SRR4302540.1941260/94‑1 (MQ=60)

                                                           TCGTGCCCGGCCCAGAAGGCGATCTGTCACCAGCCAGCAAGTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAG                                   <  SRR4302540.703909/94‑1 (MQ=60)

                                                            CTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGT                                  >  SRR4302540.9189686/1‑94 (MQ=60)

                                                            CTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGT                                  >  SRR4302540.5054797/1‑94 (MQ=60)

                                                            CTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGT                                  >  SRR4302540.3932435/1‑94 (MQ=60)

                                                            CTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGT                                  >  SRR4302540.721272/1‑94 (MQ=60)

                                                            CTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGT                                  <  SRR4302540.1268893/94‑1 (MQ=60)

                                                             TTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTA                                 >  SRR4302540.8426967/1‑94 (MQ=60)

                                                              TGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTAT                                <  SRR4302540.8474123/94‑1 (MQ=60)

                                                              TGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTAT                                <  SRR4302540.9054075/94‑1 (MQ=60)

                                                              TGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTAT                                <  SRR4302540.8873103/94‑1 (MQ=60)

                                                              TGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTAT                                <  SRR4302540.7158645/94‑1 (MQ=60)

                                                              TGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTAT                                <  SRR4302540.3608767/94‑1 (MQ=60)

                                                               GCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATT                               <  SRR4302540.7859257/94‑1 (MQ=60)

                                                               GCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATT                               >  SRR4302540.670676/1‑94 (MQ=60)

                                                               GCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATT                               >  SRR4302540.7166160/1‑94 (MQ=60)

                                                               GCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATT                               >  SRR4302540.9638252/1‑94 (MQ=60)

                                                               GCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATT                               <  SRR4302540.7236214/94‑1 (MQ=60)

                                                                gccgggctgTAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTA                              <  SRR4302540.8205430/85‑1 (MQ=60)

                                                                CCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTA                              >  SRR4302540.5353093/1‑94 (MQ=60)

                                                                CCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTA                              <  SRR4302540.8205431/94‑1 (MQ=60)

                                                                 CCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTAC                             <  SRR4302540.4429859/94‑1 (MQ=60)

                                                                 CCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTAC                             <  SRR4302540.9291949/94‑1 (MQ=60)

                                                                  CGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACC                            <  SRR4302540.9439768/94‑1 (MQ=60)

                                                                  CGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACC                            >  SRR4302540.7660352/1‑94 (MQ=60)

                                                                  CGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACC                            <  SRR4302540.9670178/94‑1 (MQ=60)

                                                                   GGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCC                           >  SRR4302540.9614922/1‑94 (MQ=60)

                                                                     CCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTT                         >  SRR4302540.8650412/1‑94 (MQ=60)

                                                                      CCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTG                        <  SRR4302540.5458601/94‑1 (MQ=60)

                                                                      CCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTG                        >  SRR4302540.2632388/1‑94 (MQ=60)

                                                                      CCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTG                        >  SRR4302540.9643044/1‑94 (MQ=60)

                                                                      CCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTG                        <  SRR4302540.429901/94‑1 (MQ=60)

                                                                       CATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGC                       >  SRR4302540.5328891/1‑94 (MQ=60)

                                                                       CATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGC                       <  SRR4302540.6524155/94‑1 (MQ=60)

                                                                       CATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGC                       >  SRR4302540.9866515/1‑94 (MQ=60)

                                                                       CATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGC                       <  SRR4302540.8379632/94‑1 (MQ=60)

                                                                       CATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGC                       <  SRR4302540.9568306/94‑1 (MQ=60)

                                                                        ATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCG                      >  SRR4302540.4271189/1‑94 (MQ=60)

                                                                        ATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCG                      >  SRR4302540.52308/1‑94 (MQ=60)

                                                                        ATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCG                      >  SRR4302540.7180882/1‑94 (MQ=60)

                                                                        ATAAGGCAATCTGTAACAAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCG                      <  SRR4302540.5240599/94‑1 (MQ=60)

                                                                        ATAAGGCAATCTGTAAAAAGCCAGCAAGTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCG                      <  SRR4302540.5240600/94‑1 (MQ=60)

                                                                         TAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGA                     >  SRR4302540.9883976/1‑94 (MQ=60)

                                                                         TAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGAATTACCCTTGCGA                     >  SRR4302540.4480480/1‑94 (MQ=60)

                                                                          AAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAG                    <  SRR4302540.4007350/94‑1 (MQ=60)

                                                                          AAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAG                    <  SRR4302540.6314357/94‑1 (MQ=60)

                                                                          AAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAG                    >  SRR4302540.7501984/1‑94 (MQ=60)

                                                                          AAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAG                    >  SRR4302540.759842/1‑94 (MQ=60)

                                                                             GCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTT                 <  SRR4302540.8273917/94‑1 (MQ=60)

                                                                              CAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTC                <  SRR4302540.2480867/94‑1 (MQ=60)

                                                                                ATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAA              >  SRR4302540.7288740/1‑94 (MQ=60)

                                                                                ATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAA              >  SRR4302540.7516467/1‑94 (MQ=60)

                                                                                ATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGCCTGTGTATTACCCTTGacaccttcca              >  SRR4302540.4697293/1‑84 (MQ=60)

                                                                                 TCTGTAACCAGCCAGCAATTTTGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAAT             <  SRR4302540.6879369/94‑1 (MQ=60)

                                                                                 TCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAAT             <  SRR4302540.6879370/94‑1 (MQ=60)

                                                                                  CTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATA            <  SRR4302540.557831/94‑1 (MQ=60)

                                                                                   TGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAGTAA           <  SRR4302540.7227003/94‑1 (MQ=60)

                                                                                    GTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAAT          <  SRR4302540.2275227/94‑1 (MQ=60)

                                                                                    GTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAAT          >  SRR4302540.138378/1‑94 (MQ=60)

                                                                                    GTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAAT          >  SRR4302540.8431044/1‑94 (MQ=60)

                                                                                     TAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATC         <  SRR4302540.4078621/94‑1 (MQ=60)

                                                                                      ACCCAGCCAGCAATTTGGTTATTGCTGAGTTCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCA        <  SRR4302540.2780549/94‑1 (MQ=60)

                                                                                      AACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCA        <  SRR4302540.2780550/94‑1 (MQ=60)

                                                                                      AACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCA        <  SRR4302540.1729488/94‑1 (MQ=60)

                                                                                       ACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAA       <  SRR4302540.1559638/94‑1 (MQ=60)

                                                                                       ACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAA       >  SRR4302540.1044947/1‑94 (MQ=60)

                                                                                        CCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAAT      <  SRR4302540.7791186/94‑1 (MQ=60)

                                                                                         CAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAACGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAATG     <  SRR4302540.5691485/94‑1 (MQ=60)

                                                                                         CAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAATG     <  SRR4302540.1661503/94‑1 (MQ=60)

                                                                                         CAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAATG     >  SRR4302540.9870588/1‑94 (MQ=60)

                                                                                         CAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAATG     <  SRR4302540.6567172/94‑1 (MQ=60)

                                                                                          AGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAATGC    >  SRR4302540.5216451/1‑94 (MQ=60)

                                                                                          AGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAATGC    <  SRR4302540.3381545/94‑1 (MQ=60)

                                                                                          AGCCAGCAATTTGGTTAGTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAATGC    <  SRR4302540.5456222/94‑1 (MQ=60)

                                                                                           GCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAATGCA   <  SRR4302540.4133615/94‑1 (MQ=60)

                                                                                           GCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAATGCA   >  SRR4302540.6128773/1‑94 (MQ=60)

                                                                                           GCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAATGCA   >  SRR4302540.5642487/1‑94 (MQ=60)

                                                                                            CCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAATGCAT  <  SRR4302540.5129285/94‑1 (MQ=60)

                                                                                            CCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAATGCAT  >  SRR4302540.1271031/1‑94 (MQ=60)

                                                                                            CCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAATGCAT  <  SRR4302540.3701125/94‑1 (MQ=60)

                                                                                            CCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCAAGCTTCAATAATCAATGCAT  >  SRR4302540.1271032/1‑94 (MQ=60)

AACCACGCGCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGTCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAATGCAT  >  NC_000913/1091212‑1091397

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`