Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,587,936 A→G R30R (CGT→CGC)  b1505 ← putative outer membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,587,9360AG99.7% 1020.5 / ‑5.1 318R30R (CGT→CGC) b1505putative outer membrane protein
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (148/169);  total (149/169)
Fisher's exact test for biased strand distribution p-value = 4.69e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.07e-01

Only 100 of 331 total aligned reads displayed.

TGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCACTCAT  >  NC_000913/1587846‑1588025
                                                                                          |                                                                                         
tGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACcgcg                                                                                         >  1:4979113/1‑93 (MQ=255)
tGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACcgcg                                                                                         >  2:4473263/1‑93 (MQ=255)
  aCGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCt                                                                                       <  1:6091326/93‑1 (MQ=255)
   cGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCtt                                                                                      <  1:9030932/93‑1 (MQ=255)
    gtgtTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTa                                                                                     >  1:1655252/1‑93 (MQ=255)
    gtgtTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTa                                                                                     <  1:2111899/93‑1 (MQ=255)
     tgtTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTAc                                                                                    >  1:572995/1‑93 (MQ=255)
      gtTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACt                                                                                   >  1:5921176/1‑93 (MQ=255)
      gtTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACt                                                                                   >  1:2513994/1‑93 (MQ=255)
       ttCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTg                                                                                  <  2:9904569/93‑1 (MQ=255)
       ttCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCGGACCGCGCTTACTg                                                                                  <  1:5429638/93‑1 (MQ=255)
        tCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGt                                                                                 >  1:5184222/1‑93 (MQ=255)
        tCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGt                                                                                 <  1:6025899/93‑1 (MQ=255)
         ccAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTa                                                                                <  2:3975002/93‑1 (MQ=255)
          cAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAg                                                                               <  2:9832055/93‑1 (MQ=255)
          cAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAg                                                                               <  1:76016/93‑1 (MQ=255)
            gTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGaa                                                                             >  1:9833749/1‑93 (MQ=255)
            gTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGaa                                                                             <  1:8247102/93‑1 (MQ=255)
             tAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAAc                                                                            <  1:4426004/93‑1 (MQ=255)
              aaCTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACa                                                                           <  1:8169981/93‑1 (MQ=255)
              aaCTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACa                                                                           <  2:4806071/93‑1 (MQ=255)
                ttttGGCGACTGGCTCTGAAAAATGTCGTAGCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGa                                                                         <  2:4109906/92‑1 (MQ=255)
                cTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGNCCGCGCTTACTGTAGAACAgt                                                                         >  1:7807490/1‑92 (MQ=255)
                cTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACCGa                                                                         >  1:4044892/1‑93 (MQ=255)
                 tttGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGAt                                                                        >  1:1501016/1‑93 (MQ=255)
                  ttGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGAtt                                                                       <  2:5611770/93‑1 (MQ=255)
                  ttGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGAtt                                                                       <  2:6148327/93‑1 (MQ=255)
                    ggCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTaa                                                                     >  2:118070/1‑93 (MQ=255)
                     gCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGCGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTaaa                                                                    >  2:5783214/1‑93 (MQ=255)
                     gCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTCCTGTAGAACAGATTaaa                                                                    <  2:10041610/93‑1 (MQ=255)
                      cGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTaaaa                                                                   <  1:502660/93‑1 (MQ=255)
                       gACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAaat                                                                  <  2:6823251/93‑1 (MQ=255)
                        aCTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAaata                                                                 <  2:3667485/93‑1 (MQ=255)
                          tGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAaataat                                                               <  2:5477311/93‑1 (MQ=255)
                          tGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAaataat                                                               >  2:9641875/1‑93 (MQ=255)
                           ggCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATc                                                              >  1:324811/1‑93 (MQ=255)
                           ggCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATc                                                              <  2:7352667/93‑1 (MQ=255)
                             cACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCaa                                                            <  1:901325/93‑1 (MQ=255)
                             cACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCaa                                                            >  2:3416309/1‑93 (MQ=255)
                             cACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCaa                                                            >  1:2887634/1‑93 (MQ=255)
                               cTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATa                                                          <  1:632066/93‑1 (MQ=255)
                               cTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATa                                                          >  2:2869212/1‑93 (MQ=255)
                               cTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATa                                                          >  2:1199858/1‑93 (MQ=255)
                                 gAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATaaa                                                        <  2:4407468/93‑1 (MQ=255)
                                 gAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATaaa                                                        >  1:699454/1‑93 (MQ=255)
                                    aaaTGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATtg                                                     <  1:2790210/93‑1 (MQ=255)
                                    aaaTGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTGATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATtg                                                     <  2:19842/93‑1 (MQ=255)
                                      aTGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATtgtg                                                   <  1:3629917/93‑1 (MQ=255)
                                        gTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTc                                                 <  2:2101571/93‑1 (MQ=255)
                                        gTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTc                                                 >  2:7513177/1‑93 (MQ=255)
                                        gTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTc                                                 >  1:3004674/1‑93 (MQ=255)
                                        gTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTc                                                 <  2:7388458/93‑1 (MQ=255)
                                         tCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCt                                                <  1:896314/93‑1 (MQ=255)
                                             aCCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTc                                            <  2:2746330/93‑1 (MQ=255)
                                             aCCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTc                                            >  1:4212231/1‑93 (MQ=255)
                                              ccGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCa                                           <  1:5247913/93‑1 (MQ=255)
                                              ccGTAATTTCCAAGATGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTACAATAATCAATCAATTGTGTCTGCTCa                                           >  1:5793727/1‑93 (MQ=255)
                                                gTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCAtt                                         <  2:8183458/93‑1 (MQ=255)
                                                gTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCAtt                                         <  2:7573176/93‑1 (MQ=255)
                                                 tAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTg                                        >  1:10023366/1‑93 (MQ=255)
                                                 tAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTg                                        >  1:5669100/1‑93 (MQ=255)
                                                 tAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTg                                        >  1:6442368/1‑93 (MQ=255)
                                                     ttCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGgtgt                                    <  1:1384189/93‑1 (MQ=255)
                                                     ttCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGgtgt                                    <  1:4650720/93‑1 (MQ=255)
                                                      tCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGtc                                   >  1:8346736/1‑93 (MQ=255)
                                                      tCCAAGCTGCTGAGAGATGCTTATTTGTCCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGtc                                   <  2:890001/93‑1 (MQ=255)
                                                       ccAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGtct                                  <  2:1891266/93‑1 (MQ=255)
                                                        cAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGtctc                                 >  2:7942607/1‑93 (MQ=255)
                                                        cAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGtctc                                 >  1:8847045/1‑93 (MQ=255)
                                                         aaGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTcc                                >  1:7882433/1‑93 (MQ=255)
                                                         aaGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTcc                                <  1:744104/93‑1 (MQ=255)
                                                           gctgctGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCgg                              >  1:9673592/1‑93 (MQ=255)
                                                           gctgctGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCgg                              >  1:1721628/1‑93 (MQ=255)
                                                           gctgctGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCgg                              <  1:9461526/93‑1 (MQ=255)
                                                            ctgctgAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGt                             <  2:6240869/93‑1 (MQ=255)
                                                             tgctgAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTa                            >  2:952576/1‑93 (MQ=255)
                                                             tgctgAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTa                            >  2:7136817/1‑93 (MQ=255)
                                                             tgctgAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTa                            <  1:9304657/93‑1 (MQ=255)
                                                              gctgAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTag                           >  2:8048326/1‑93 (MQ=255)
                                                              gctgAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGGGTCTCCGGTag                           <  2:432616/93‑1 (MQ=255)
                                                               ctgAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTagg                          <  2:9942336/93‑1 (MQ=255)
                                                                tgAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTagga                         >  2:3499124/1‑93 (MQ=255)
                                                                tgAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTagga                         <  1:7211264/93‑1 (MQ=255)
                                                                 gagagaTGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTaggag                        >  1:1181676/1‑93 (MQ=255)
                                                                 gagagaTGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTaggag                        <  2:558901/93‑1 (MQ=255)
                                                                  agagaTGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTaggagg                       >  2:3537792/1‑93 (MQ=255)
                                                                    agaTGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCTGGTAGGAGGCt                     <  1:3846127/93‑1 (MQ=255)
                                                                     gaTGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAGATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCtt                    >  2:6258421/1‑93 (MQ=255)
                                                                     gaTGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCtt                    <  1:4571390/93‑1 (MQ=255)
                                                                       tGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGa                  >  2:6409840/1‑93 (MQ=255)
                                                                       tGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGa                  <  1:7278638/93‑1 (MQ=255)
                                                                         cTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACg                <  2:1732385/93‑1 (MQ=255)
                                                                           tATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGgt              <  1:8056127/93‑1 (MQ=255)
                                                                           tATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTATCTCCGGTAGGAGGCTTGACGgt              >  2:5522987/1‑93 (MQ=255)
                                                                            aTTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGgtg             <  1:6000284/93‑1 (MQ=255)
                                                                              ttGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTa           >  2:7785284/1‑93 (MQ=255)
                                                                                gTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAc         <  2:1258089/93‑1 (MQ=255)
                                                                                gTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAc         <  1:909772/93‑1 (MQ=255)
                                                                                gTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAc         <  1:2624286/93‑1 (MQ=255)
                                                                                    cTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCACt     >  1:2210559/1‑93 (MQ=255)
                                                                                          |                                                                                         
TGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCACTCAT  >  NC_000913/1587846‑1588025

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCGTGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCACTCATTCGA  >  NC_000913/1587843‑1588029
                                                                                             |                                                                                             
GCGTGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCG                                                                                               <  SRR4302540.5556335/94‑1 (MQ=60)
GCGTGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCG                                                                                               <  SRR4302540.5556336/94‑1 (MQ=60)
GCGTGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCG                                                                                               >  SRR4302540.962585/1‑94 (MQ=60)
GCGTGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCG                                                                                               >  SRR4302540.7329/1‑94 (MQ=60)
GCGTGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCG                                                                                               <  SRR4302540.1564748/94‑1 (MQ=60)
 CGTGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGC                                                                                              >  SRR4302540.3056662/1‑94 (MQ=60)
 CGTGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGC                                                                                              >  SRR4302540.3379325/1‑94 (MQ=60)
 CGTGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGC                                                                                              >  SRR4302540.3056663/1‑94 (MQ=60)
  GTGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCG                                                                                             >  SRR4302540.5033008/1‑94 (MQ=60)
  GTGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCG                                                                                             <  SRR4302540.5403534/94‑1 (MQ=60)
   TGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGC                                                                                            <  SRR4302540.8568141/94‑1 (MQ=60)
   TGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGC                                                                                            >  SRR4302540.6061163/1‑94 (MQ=60)
   TGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGC                                                                                            >  SRR4302540.6061164/1‑94 (MQ=60)
    GACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCT                                                                                           <  SRR4302540.8170840/94‑1 (MQ=60)
     ACGTTTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTT                                                                                          <  SRR4302540.6088736/94‑1 (MQ=60)
     ACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTT                                                                                          <  SRR4302540.6159122/94‑1 (MQ=60)
      CGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTA                                                                                         <  SRR4302540.9139310/94‑1 (MQ=60)
      CGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTA                                                                                         <  SRR4302540.9139311/94‑1 (MQ=60)
      CGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTA                                                                                         >  SRR4302540.1673290/1‑94 (MQ=60)
      CGTGTTCCAGTAACTTTAGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTCAGAGATGCTTATTTGTTCCTGACCGCGCTTA                                                                                         >  SRR4302540.2153264/1‑94 (MQ=60)
       GTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTAC                                                                                        <  SRR4302540.8084866/94‑1 (MQ=60)
       GTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTAC                                                                                        >  SRR4302540.579216/1‑94 (MQ=60)
       GTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTAC                                                                                        <  SRR4302540.2134562/94‑1 (MQ=60)
       GTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTAC                                                                                        >  SRR4302540.366689/1‑94 (MQ=60)
        TGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACT                                                                                       >  SRR4302540.2541156/1‑94 (MQ=60)
        TGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACT                                                                                       >  SRR4302540.6239543/1‑94 (MQ=60)
        TGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACT                                                                                       >  SRR4302540.5986593/1‑94 (MQ=60)
         GTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTG                                                                                      >  SRR4302540.6446123/1‑94 (MQ=60)
          TTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGT                                                                                     >  SRR4302540.5240658/1‑94 (MQ=60)
          TTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCGGACCGCGCTTACTGT                                                                                     <  SRR4302540.5489355/94‑1 (MQ=60)
          TTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGGAATTTCCAAGCTGGTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGT                                                                                     <  SRR4302540.3044095/94‑1 (MQ=60)
           TCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTA                                                                                    <  SRR4302540.6092764/94‑1 (MQ=60)
             CAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGA                                                                                  <  SRR4302540.76805/94‑1 (MQ=60)
             CAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGA                                                                                  >  SRR4302540.9136275/1‑94 (MQ=60)
              AGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAA                                                                                 >  SRR4302540.9948750/1‑94 (MQ=60)
               GTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAAC                                                                                >  SRR4302540.4645435/1‑94 (MQ=60)
               GTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAAC                                                                                <  SRR4302540.8342965/94‑1 (MQ=60)
               GTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAAC                                                                                <  SRR4302540.9980299/94‑1 (MQ=60)
                TAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACA                                                                               <  SRR4302540.4473956/94‑1 (MQ=60)
                 AACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAG                                                                              <  SRR4302540.7095365/94‑1 (MQ=60)
                 AACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAG                                                                              <  SRR4302540.8264863/94‑1 (MQ=60)
                 AACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAG                                                                              >  SRR4302540.10029753/1‑94 (MQ=60)
                  ACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGNCCGCGCTTACTGTAGAACAGT                                                                             >  SRR4302540.7898726/1‑94 (MQ=60)
                  ACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACCGA                                                                             >  SRR4302540.4088500/1‑94 (MQ=60)
                   CTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGAT                                                                            >  SRR4302540.323510/1‑94 (MQ=60)
                   CTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGAT                                                                            >  SRR4302540.1517555/1‑94 (MQ=60)
                   CTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGAT                                                                            >  SRR4302540.8278939/1‑94 (MQ=60)
                   CTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGAT                                                                            <  SRR4302540.7145533/94‑1 (MQ=60)
                   CTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGAT                                                                            <  SRR4302540.1728688/94‑1 (MQ=60)
                   CTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGAT                                                                            <  SRR4302540.5248509/94‑1 (MQ=60)
                    TTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATT                                                                           <  SRR4302540.2225872/94‑1 (MQ=60)
                     TTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTA                                                                          <  SRR4302540.5496970/94‑1 (MQ=60)
                         CGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAAT                                                                      <  SRR4302540.9021632/94‑1 (MQ=60)
                         CGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAAT                                                                      <  SRR4302540.4625309/94‑1 (MQ=60)
                         CGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAAT                                                                      <  SRR4302540.508050/94‑1 (MQ=60)
                         CGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAAT                                                                      <  SRR4302540.9021631/94‑1 (MQ=60)
                           ACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAA                                                                    <  SRR4302540.9137966/94‑1 (MQ=60)
                            CTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAAT                                                                   >  SRR4302540.989782/1‑94 (MQ=60)
                            CTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAAT                                                                   >  SRR4302540.989780/1‑94 (MQ=60)
                            CTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAAT                                                                   >  SRR4302540.4478035/1‑94 (MQ=60)
                            CTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAAT                                                                   >  SRR4302540.4478036/1‑94 (MQ=60)
                             TGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATC                                                                  <  SRR4302540.4661869/94‑1 (MQ=60)
                             TGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATC                                                                  >  SRR4302540.328065/1‑94 (MQ=60)
                               GCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAA                                                                >  SRR4302540.2919082/1‑94 (MQ=60)
                               GCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAA                                                                <  SRR4302540.1667344/94‑1 (MQ=60)
                                CACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAAT                                                               <  SRR4302540.631470/94‑1 (MQ=60)
                                CACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAAT                                                               <  SRR4302540.910900/94‑1 (MQ=60)
                                CACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAAT                                                               <  SRR4302540.910899/94‑1 (MQ=60)
                                 ACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATA                                                              >  SRR4302540.5784636/1‑94 (MQ=60)
                                  CTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAA                                                             >  SRR4302540.5624751/1‑94 (MQ=60)
                                  CTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAA                                                             <  SRR4302540.638785/94‑1 (MQ=60)
                                   TGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAA                                                            >  SRR4302540.706959/1‑94 (MQ=60)
                                   TGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAA                                                            <  SRR4302540.5287959/94‑1 (MQ=60)
                                   TGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAA                                                            <  SRR4302540.4263755/94‑1 (MQ=60)
                                    GAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAAT                                                           >  SRR4302540.5227233/1‑94 (MQ=60)
                                     AAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATT                                                          <  SRR4302540.3715380/94‑1 (MQ=60)
                                      AAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTG                                                         >  SRR4302540.916301/1‑94 (MQ=60)
                                      AAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTG                                                         <  SRR4302540.2607110/94‑1 (MQ=60)
                                       AAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGT                                                        <  SRR4302540.7544357/94‑1 (MQ=60)
                                       AAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGT                                                        >  SRR4302540.27300/1‑94 (MQ=60)
                                       AAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGT                                                        <  SRR4302540.2820337/94‑1 (MQ=60)
                                        AATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTG                                                       <  SRR4302540.7707073/94‑1 (MQ=60)
                                         ATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGT                                                      <  SRR4302540.5080792/94‑1 (MQ=60)
                                         ATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGT                                                      <  SRR4302540.3669650/94‑1 (MQ=60)
                                         ATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGT                                                      <  SRR4302540.3669649/94‑1 (MQ=60)
                                          TGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTC                                                     <  SRR4302540.2293538/94‑1 (MQ=60)
                                          TGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTC                                                     <  SRR4302540.6110213/94‑1 (MQ=60)
                                          TGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTC                                                     >  SRR4302540.3037759/1‑94 (MQ=60)
                                           GTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCT                                                    <  SRR4302540.1196183/94‑1 (MQ=60)
                                           GTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCT                                                    >  SRR4302540.6021050/1‑94 (MQ=60)
                                            TCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTG                                                   <  SRR4302540.9363918/94‑1 (MQ=60)
                                            TCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTG                                                   <  SRR4302540.905837/94‑1 (MQ=60)
                                              GTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCT                                                 >  SRR4302540.6442218/1‑94 (MQ=60)
                                               TACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTC                                                >  SRR4302540.4258093/1‑94 (MQ=60)
                                               TACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTC                                                <  SRR4302540.9251527/94‑1 (MQ=60)
                                               TACCGGAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTC                                                <  SRR4302540.2607298/94‑1 (MQ=60)
                                                ACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCA                                               <  SRR4302540.5340223/94‑1 (MQ=60)
                                                ACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCA                                               >  SRR4302540.3893808/1‑94 (MQ=60)
                                                ACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCA                                               >  SRR4302540.4242074/1‑94 (MQ=60)
                                                ACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCA                                               >  SRR4302540.5857743/1‑94 (MQ=60)
                                                ACCGTAATTTCCAAGATGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTACAATAATCAATCAATTGTGTCTGCTCA                                               >  SRR4302540.5857744/1‑94 (MQ=60)
                                                 CCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCAT                                              >  SRR4302540.7459964/1‑94 (MQ=60)
                                                 CCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCAT                                              <  SRR4302540.9162482/94‑1 (MQ=60)
                                                 CCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCAT                                              <  SRR4302540.5305153/94‑1 (MQ=60)
                                                 CCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCAT                                              <  SRR4302540.8143144/94‑1 (MQ=60)
                                                   GTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTG                                            >  SRR4302540.1457011/1‑94 (MQ=60)
                                                   GTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTG                                            >  SRR4302540.6514072/1‑94 (MQ=60)
                                                   GTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTG                                            >  SRR4302540.1457010/1‑94 (MQ=60)
                                                   GTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTG                                            >  SRR4302540.5731525/1‑94 (MQ=60)
                                                   GTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTG                                            >  SRR4302540.10140000/1‑94 (MQ=60)
                                                    TAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGG                                           <  SRR4302540.7557988/94‑1 (MQ=60)
                                                     AATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGT                                          <  SRR4302540.7301005/94‑1 (MQ=60)
                                                     AATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGT                                          <  SRR4302540.5809763/94‑1 (MQ=60)
                                                      ATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTG                                         <  SRR4302540.2424367/94‑1 (MQ=60)
                                                       TTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGT                                        >  SRR4302540.6162619/1‑94 (MQ=60)
                                                       TTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGT                                        >  SRR4302540.2830981/1‑94 (MQ=60)
                                                        TTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTC                                       <  SRR4302540.1398978/94‑1 (MQ=60)
                                                        TTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTC                                       <  SRR4302540.4700495/94‑1 (MQ=60)
                                                        TTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTC                                       <  SRR4302540.4700494/94‑1 (MQ=60)
                                                        TTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTC                                       >  SRR4302540.8443610/1‑94 (MQ=60)
                                                         TCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCT                                      >  SRR4302540.5214594/1‑94 (MQ=60)
                                                         TCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCT                                      <  SRR4302540.2004485/94‑1 (MQ=60)
                                                         TCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCT                                      <  SRR4302540.7410699/94‑1 (MQ=60)
                                                          CCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTC                                     >  SRR4302540.7941056/1‑94 (MQ=60)
                                                          CCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTC                                     >  SRR4302540.8949393/1‑94 (MQ=60)
                                                          CCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTC                                     >  SRR4302540.5775079/1‑94 (MQ=60)
                                                           CAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCC                                    >  SRR4302540.7974472/1‑94 (MQ=60)
                                                            AAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCG                                   >  SRR4302540.5420211/1‑94 (MQ=60)
                                                            AAGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCG                                   <  SRR4302540.752035/94‑1 (MQ=60)
                                                             AGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGG                                  >  SRR4302540.9787418/1‑94 (MQ=60)
                                                             AGCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGG                                  >  SRR4302540.1740210/1‑94 (MQ=60)
                                                              GCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGT                                 <  SRR4302540.8737825/94‑1 (MQ=60)
                                                              GCTGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGT                                 <  SRR4302540.9573788/94‑1 (MQ=60)
                                                                TGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAG                               <  SRR4302540.7080588/94‑1 (MQ=60)
                                                                TGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAG                               >  SRR4302540.2683299/1‑94 (MQ=60)
                                                                TGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAG                               >  SRR4302540.1531355/1‑94 (MQ=60)
                                                                TGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAG                               <  SRR4302540.9415787/94‑1 (MQ=60)
                                                                TGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAG                               >  SRR4302540.2142964/1‑94 (MQ=60)
                                                                TGCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAG                               <  SRR4302540.1666279/94‑1 (MQ=60)
                                                                 GCTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGG                              <  SRR4302540.1155559/94‑1 (MQ=60)
                                                                  CTGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGA                             <  SRR4302540.1845266/94‑1 (MQ=60)
                                                                   TGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAG                            >  SRR4302540.6925891/1‑94 (MQ=60)
                                                                   TGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAG                            <  SRR4302540.7291659/94‑1 (MQ=60)
                                                                   TGAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAG                            >  SRR4302540.1193876/1‑94 (MQ=60)
                                                                    GAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGG                           >  SRR4302540.5604300/1‑94 (MQ=60)
                                                                    GAGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGG                           >  SRR4302540.1024325/1‑94 (MQ=60)
                                                                     AGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGT                          >  SRR4302540.129991/1‑94 (MQ=60)
                                                                     AGAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGC                          >  SRR4302540.9625296/1‑94 (MQ=60)
                                                                      GAGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCT                         >  SRR4302540.2996832/1‑94 (MQ=60)
                                                                       AGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCTGGTAGGAGGCTT                        <  SRR4302540.3887953/94‑1 (MQ=60)
                                                                       AGATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTT                        >  SRR4302540.8733109/1‑94 (MQ=60)
                                                                        GATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTG                       <  SRR4302540.4620732/94‑1 (MQ=60)
                                                                        GATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTG                       <  SRR4302540.5881824/94‑1 (MQ=60)
                                                                        GATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTG                       >  SRR4302540.3280424/1‑94 (MQ=60)
                                                                         ATGTTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTACAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGA                      >  SRR4302540.5060881/1‑94 (MQ=60)
                                                                         ATGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGA                      >  SRR4302540.8172165/1‑94 (MQ=60)
                                                                          TGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGAC                     >  SRR4302540.9566173/1‑94 (MQ=60)
                                                                          TGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGAC                     <  SRR4302540.955705/94‑1 (MQ=60)
                                                                          TGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGAC                     <  SRR4302540.7816954/94‑1 (MQ=60)
                                                                          TGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGAC                     <  SRR4302540.7359846/94‑1 (MQ=60)
                                                                          TGCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGAC                     >  SRR4302540.413776/1‑94 (MQ=60)
                                                                           GCTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACG                    <  SRR4302540.5984356/94‑1 (MQ=60)
                                                                            CTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGG                   >  SRR4302540.8369829/1‑94 (MQ=60)
                                                                            CTTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGG                   >  SRR4302540.3983000/1‑94 (MQ=60)
                                                                             TTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGT                  >  SRR4302540.3009804/1‑94 (MQ=60)
                                                                             TTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGT                  <  SRR4302540.8331111/94‑1 (MQ=60)
                                                                             TTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGT                  >  SRR4302540.4115467/1‑94 (MQ=60)
                                                                             TTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGT                  >  SRR4302540.7940618/1‑94 (MQ=60)
                                                                             TTATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGT                  <  SRR4302540.7305080/94‑1 (MQ=60)
                                                                              TATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTG                 <  SRR4302540.8149673/94‑1 (MQ=60)
                                                                               ATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGT                <  SRR4302540.6066787/94‑1 (MQ=60)
                                                                               ATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGT                >  SRR4302540.8442837/1‑94 (MQ=60)
                                                                               ATTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGT                <  SRR4302540.6066788/94‑1 (MQ=60)
                                                                                TTTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTA               <  SRR4302540.5204255/94‑1 (MQ=60)
                                                                                 TTGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAA              <  SRR4302540.6988417/94‑1 (MQ=60)
                                                                                  TGTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAC             <  SRR4302540.2759495/94‑1 (MQ=60)
                                                                                   GTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACC            >  SRR4302540.972578/1‑94 (MQ=60)
                                                                                   GTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACC            <  SRR4302540.919412/94‑1 (MQ=60)
                                                                                   GTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACC            <  SRR4302540.9116009/94‑1 (MQ=60)
                                                                                   GTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACC            <  SRR4302540.7562739/94‑1 (MQ=60)
                                                                                   GTTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACC            <  SRR4302540.2652667/94‑1 (MQ=60)
                                                                                    TTCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCA           <  SRR4302540.5008250/94‑1 (MQ=60)
                                                                                     TCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCAC          <  SRR4302540.2873556/94‑1 (MQ=60)
                                                                                     TCCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCAC          >  SRR4302540.6154691/1‑94 (MQ=60)
                                                                                      CCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCACT         <  SRR4302540.1719108/94‑1 (MQ=60)
                                                                                      CCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCACT         >  SRR4302540.2234435/1‑94 (MQ=60)
                                                                                      CCTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCACT         >  SRR4302540.4304946/1‑94 (MQ=60)
                                                                                       CTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCACTC        >  SRR4302540.9435786/1‑94 (MQ=60)
                                                                                       CTGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCACTC        <  SRR4302540.8078913/94‑1 (MQ=60)
                                                                                        TGACCGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCACTCA       <  SRR4302540.3683965/94‑1 (MQ=60)
                                                                                            CGCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCACTCATTCG   <  SRR4302540.8235399/94‑1 (MQ=60)
                                                                                             GCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCACTCATTCGA  >  SRR4302540.10024850/1‑94 (MQ=60)
                                                                                             GCGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCACTCATTCGA  >  SRR4302540.5142114/1‑94 (MQ=60)
                                                                                             |                                                                                             
GCGTGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCACTCATTCGA  >  NC_000913/1587843‑1588029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑