Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,721,938 |
A→G |
V598V (GTA→GTG) |
b1645 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,721,938 | 0 | A | G | 100.0%
| 768.2
/ NA
| 241 | V598V (GTA→GTG) | b1645 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (119/122); total (119/122) |
Only 100 of 249 total aligned reads displayed.
ATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACA > NC_000913/1721848‑1722027
|
ttaCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCgg < 2:4448712/93‑1 (MQ=255)
taCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCggg > 1:8655354/1‑93 (MQ=255)
taCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCggg < 2:1511631/93‑1 (MQ=255)
taCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCggg < 2:2017691/93‑1 (MQ=255)
aCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGa < 1:5412939/93‑1 (MQ=255)
aCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGa < 2:5972837/93‑1 (MQ=255)
gCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATa > 2:3434018/1‑93 (MQ=255)
gCTGGGGGTTAGTGCTGCTTAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCTCGTTCCGATCCGTTATCGCGAGTGCGGGATa < 2:2414604/93‑1 (MQ=255)
cTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATaa > 1:9119403/1‑93 (MQ=255)
cTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATaa > 1:3062570/1‑93 (MQ=255)
tGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATaat > 1:3248176/1‑92 (MQ=255)
tGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAAc < 1:1223487/93‑1 (MQ=255)
ggggTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGTGTTTCGATCCGTTATAGCGAGTGCGGGATaaat > 2:459139/1‑91 (MQ=255)
ggggTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACt < 2:2989358/93‑1 (MQ=255)
ggTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGt < 2:6529557/93‑1 (MQ=255)
gtgtAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTa > 1:4809633/1‑93 (MQ=255)
gtAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTAtt > 2:8689284/1‑93 (MQ=255)
tAGTGCTGCTGAACTGTTCTAATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTAttt > 2:7792286/1‑93 (MQ=255)
aGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTc < 2:3181058/93‑1 (MQ=255)
aGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTc < 1:4656406/93‑1 (MQ=255)
tgctgcTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGCTCCGTTATCGCGAGTGCGGGATAACTGTATTTCAc < 1:1805731/93‑1 (MQ=255)
gctgctGAACTGTTCTCATGTTGTCTGGCAATTACGAGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACt < 2:7087624/93‑1 (MQ=255)
ctgctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTg > 2:4019123/1‑93 (MQ=255)
tgctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATTGCGAGTGCGGGATAACTGTATTTCACTGt < 1:8389972/93‑1 (MQ=255)
tgctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGt < 2:3309838/93‑1 (MQ=255)
gctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGtt < 2:8193593/93‑1 (MQ=255)
gctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGtt > 1:8074204/1‑93 (MQ=255)
gctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGtt > 1:6401769/1‑93 (MQ=255)
gctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGtt < 2:4837364/93‑1 (MQ=255)
gAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCg > 1:6910975/1‑93 (MQ=255)
aaCTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCgg > 2:3514699/1‑93 (MQ=255)
aaCTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCgg > 2:232261/1‑93 (MQ=255)
aaCTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCgg < 1:6766610/93‑1 (MQ=255)
aaCTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCgg < 1:537001/93‑1 (MQ=255)
cTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCgggg > 1:967200/1‑93 (MQ=255)
tGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGa < 1:9348973/93‑1 (MQ=255)
tGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGa < 1:8482624/93‑1 (MQ=255)
tGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGa < 1:8341703/93‑1 (MQ=255)
gTTCTCATGTTGTCTGGCAATTGCGCGACTGGTGATCTCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAg < 1:1075336/93‑1 (MQ=255)
gTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAg < 1:7654354/93‑1 (MQ=255)
ttCTCATGTTGTCTGGCAATTGCTCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGt < 2:5533614/93‑1 (MQ=255)
ttCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGt > 1:1133631/1‑93 (MQ=255)
tctcATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtg > 2:2985392/1‑93 (MQ=255)
ctcATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGGTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtga > 1:2366628/1‑93 (MQ=255)
tcATGTTGTCTGGCAATTGCGCGACTGGGAGGCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtgat < 2:8757234/93‑1 (MQ=255)
tcATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtgat > 1:5674339/1‑93 (MQ=255)
cATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtgatg > 1:9000059/1‑93 (MQ=255)
cATGTTGTCTGGCAATCGCGCGACTGGGAATCGCGTACCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtgatg < 2:190804/93‑1 (MQ=255)
aTGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtgatga < 1:7076501/93‑1 (MQ=255)
gttgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgagt < 2:6942342/93‑1 (MQ=255)
gttgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgagg > 1:431473/1‑92 (MQ=255)
gttgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgagg > 1:9809327/1‑92 (MQ=255)
ttgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgagtg < 1:4778787/93‑1 (MQ=255)
tgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgagtga < 2:5892749/93‑1 (MQ=255)
tCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGc < 1:1771777/93‑1 (MQ=255)
tCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGc < 1:2494400/93‑1 (MQ=255)
cTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCg < 1:2069697/93‑1 (MQ=255)
ggCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTg > 2:6716815/1‑93 (MQ=255)
gCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTgg > 2:7692707/1‑93 (MQ=255)
gCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTgg > 1:5013622/1‑93 (MQ=255)
cAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGc < 2:7353746/93‑1 (MQ=255)
aaTTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCg > 1:877969/1‑93 (MQ=255)
aaTTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGAGAGCGTGGCg > 1:5896446/1‑93 (MQ=255)
aTTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGt < 2:2556661/93‑1 (MQ=255)
aTTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGt < 1:7896749/93‑1 (MQ=255)
ttGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGtt < 2:5614275/93‑1 (MQ=255)
gcgcGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCa < 1:1017225/93‑1 (MQ=255)
gcgACTGGGAATCGCGGTCTGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGc < 2:8045525/93‑1 (MQ=255)
caCTGGGAATCGCCGTCCGATCAGTTATCGGGAGTGCGGGATAACTGTATTTCACGGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCaa < 2:7241228/92‑1 (MQ=255)
aCTGGGAATCGCGTTCCGATCCGTTATCGCGAGGGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCaaa > 2:3759097/1‑93 (MQ=255)
tGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCaaaaa > 1:3350992/1‑93 (MQ=255)
tGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCaaaaa > 1:2781519/1‑93 (MQ=255)
gggAATCGCGTTCCGATCCGTTATCGCGAGAGCGGGATAACTGTATTTCACTGTTGCGGGGAGGGATGAGTGAGCGTGGCGTGCAGCAAAAAt > 1:4057296/1‑93 (MQ=255)
ggAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATc > 2:9204849/1‑93 (MQ=255)
aaTCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCAc > 2:1687640/1‑93 (MQ=255)
aTCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACt > 1:6346643/1‑93 (MQ=255)
aTCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACt < 2:6258696/93‑1 (MQ=255)
tCGTGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTg < 2:2762525/93‑1 (MQ=255)
tCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTCATGAGTGAGCGTGGCGTTCAGCAAAAATCACTg > 2:5011493/1‑93 (MQ=255)
cgcgTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTgg < 1:4950081/93‑1 (MQ=255)
gcgTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggc > 1:2844411/1‑93 (MQ=255)
gTTCCGAACCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggcgg < 2:8676561/93‑1 (MQ=255)
ttCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggcggc > 2:4666909/1‑93 (MQ=255)
ttCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggcggc > 2:9379607/1‑93 (MQ=255)
ttCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGCGAGCGTGGCGTTCAGCAAAAATCACTggcggc > 1:65061/1‑93 (MQ=255)
tCCGATCCGTTATCGCGTGTGCGGGATAACTGTATTTCACTGTTGCGGGGGGTGATGAGTGAGCGTGGCGTTTAGCAAAAATCTCTGGCGGcc > 2:5144883/1‑93 (MQ=255)
ccGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCca > 1:375555/1‑93 (MQ=255)
aTCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCacac < 2:972653/93‑1 (MQ=255)
aTCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCacac > 2:4217938/1‑93 (MQ=255)
aTCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCacac > 1:8204388/1‑93 (MQ=255)
tCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACt < 2:578649/93‑1 (MQ=255)
ccGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACtt > 1:4598656/1‑93 (MQ=255)
cGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTg > 1:6978229/1‑93 (MQ=255)
gTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTga < 1:2225581/93‑1 (MQ=255)
ttATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTgaa > 2:4953194/1‑93 (MQ=255)
tATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTgaag < 1:6265300/93‑1 (MQ=255)
aTCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTgaaga > 2:5665229/1‑93 (MQ=255)
tCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTgaagaa < 2:5915085/93‑1 (MQ=255)
cgcgAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAAt > 1:9758087/1‑93 (MQ=255)
gAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTAc > 1:1302875/1‑93 (MQ=255)
|
ATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACA > NC_000913/1721848‑1722027
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCGG > NC_000913/1721846‑1722031
|
TTATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGC > SRR4302540.4390548/1‑94 (MQ=60)
TATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCG > SRR4302540.2973095/1‑94 (MQ=60)
TATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCG < SRR4302540.9664238/94‑1 (MQ=60)
TTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGG > SRR4302540.8755899/1‑94 (MQ=60)
TTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGG < SRR4302540.9603365/94‑1 (MQ=60)
TACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGA < SRR4302540.7025945/94‑1 (MQ=60)
TACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGGTGTCTGGCAGTGGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGA < SRR4302540.7025944/94‑1 (MQ=60)
TCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGAT < SRR4302540.5292220/94‑1 (MQ=60)
ACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGAT < SRR4302540.5472452/94‑1 (MQ=60)
ACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGAT < SRR4302540.6826865/94‑1 (MQ=60)
ACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGAT > SRR4302540.6842721/1‑94 (MQ=60)
GCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAA > SRR4302540.3096170/1‑94 (MQ=60)
GCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAA > SRR4302540.9229015/1‑94 (MQ=60)
GCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAA < SRR4302540.112302/94‑1 (MQ=60)
CTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAAT > SRR4302540.3283552/1‑94 (MQ=60)
CTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAAC > SRR4302540.6333055/1‑94 (MQ=60)
TGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACT < SRR4302540.1236002/94‑1 (MQ=60)
TGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACT < SRR4302540.1236005/94‑1 (MQ=60)
GGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTA > SRR4302540.4861111/1‑94 (MQ=60)
GGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTA > SRR4302540.4861112/1‑94 (MQ=60)
TGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATT > SRR4302540.4086591/1‑94 (MQ=60)
GTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTT < SRR4302540.2581973/94‑1 (MQ=60)
AGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCA > SRR4302540.4814597/1‑94 (MQ=60)
AGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCA > SRR4302540.6625458/1‑94 (MQ=60)
AGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCA < SRR4302540.4706239/94‑1 (MQ=60)
AGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCA > SRR4302540.8859545/1‑94 (MQ=60)
GTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCAC < SRR4302540.389277/94‑1 (MQ=60)
GTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCAC < SRR4302540.6152570/94‑1 (MQ=60)
GTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCAC > SRR4302540.1317004/1‑94 (MQ=60)
TGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGCTCCGTTATCGCGAGTGCGGGATAACTGTATTTCACT < SRR4302540.1825401/94‑1 (MQ=60)
GCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTA < SRR4302540.656066/94‑1 (MQ=60)
tgctgaattttttttATGTTGTCTGGCAATTGCGCGCCTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTT < SRR4302540.8487320/79‑1 (MQ=60)
TGCTGACCTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTT < SRR4302540.9179842/94‑1 (MQ=60)
TGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATTGCGAGTGCGGGATAACTGTATTTCACTGTT < SRR4302540.8487322/94‑1 (MQ=60)
TGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTT < SRR4302540.4260020/94‑1 (MQ=60)
TGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTT < SRR4302540.890176/94‑1 (MQ=60)
TGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTT > SRR4302540.5797836/1‑94 (MQ=60)
TGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTT > SRR4302540.8167895/1‑94 (MQ=60)
TGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTT > SRR4302540.6473023/1‑94 (MQ=60)
GCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGNGNGATAACTGTATTTCACTGTTG > SRR4302540.3233858/1‑94 (MQ=60)
GCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTG < SRR4302540.4670149/94‑1 (MQ=60)
TGAACTGTTCTCCTGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATGCCTTCCCGCGAGTGCGGCTTCACTGTATTTCCCTGTTGCG > SRR4302540.6987862/1‑94 (MQ=50)
TGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCG > SRR4302540.6987861/1‑94 (MQ=60)
AACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGG < SRR4302540.6841392/94‑1 (MQ=60)
AACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGG < SRR4302540.542815/94‑1 (MQ=60)
ACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGG > SRR4302540.977178/1‑94 (MQ=60)
TGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGGG > SRR4302540.873220/1‑94 (MQ=60)
TGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAG < SRR4302540.8438525/94‑1 (MQ=60)
TGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAG < SRR4302540.8581164/94‑1 (MQ=60)
TGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAG < SRR4302540.9460332/94‑1 (MQ=60)
TGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCAGCTATCGCGTGTTCGGCATGATTGTATTTCACTGTTGCGGGAAG > SRR4302540.5038013/1‑94 (MQ=60)
GTTCTCATGTTGTCTGGCAATTGCGCGACTGGTGATCTCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGT < SRR4302540.1086324/94‑1 (MQ=60)
GTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGT < SRR4302540.7740525/94‑1 (MQ=60)
GTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGT > SRR4302540.1145447/1‑94 (MQ=60)
GTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGG > SRR4302540.1145449/1‑94 (MQ=60)
TCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGGTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGA > SRR4302540.2392116/1‑94 (MQ=60)
CTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAT > SRR4302540.6430675/1‑94 (MQ=60)
CTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAT > SRR4302540.6430676/1‑94 (MQ=60)
CTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAT < SRR4302540.9660571/94‑1 (MQ=60)
CTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAT > SRR4302540.5736824/1‑94 (MQ=60)
TCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATG > SRR4302540.9108039/1‑94 (MQ=60)
ATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAG > SRR4302540.4989473/1‑94 (MQ=60)
ATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAG < SRR4302540.7155246/94‑1 (MQ=60)
TGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGT > SRR4302540.9924132/1‑94 (MQ=60)
TGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGG > SRR4302540.436035/1‑94 (MQ=60)
TGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGG > SRR4302540.9924133/1‑94 (MQ=60)
GTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTG > SRR4302540.1066200/1‑94 (MQ=60)
TTGTCTGGCAATTGCGGGACTGGGAATCGCGTTCCGATCCGGTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGA < SRR4302540.838481/94‑1 (MQ=60)
TTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGA < SRR4302540.4829845/94‑1 (MQ=60)
TGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGGGTGAG > SRR4302540.2815845/1‑94 (MQ=60)
TCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCG < SRR4302540.1791004/94‑1 (MQ=60)
TCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCG < SRR4302540.2521276/94‑1 (MQ=60)
CTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGT < SRR4302540.2091959/94‑1 (MQ=60)
CTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGT > SRR4302540.8501191/1‑94 (MQ=60)
CTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGG > SRR4302540.49516/1‑94 (MQ=60)
GGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGG > SRR4302540.5067904/1‑94 (MQ=60)
GCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGC > SRR4302540.8522138/1‑94 (MQ=60)
CAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCG > SRR4302540.4405481/1‑94 (MQ=60)
CAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCG > SRR4302540.887287/1‑94 (MQ=60)
CAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGAGAGCGTGGCG > SRR4302540.5961562/1‑94 (MQ=60)
AATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGGGAGGGTGGCGT > SRR4302540.2223576/1‑94 (MQ=60)
ATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTT < SRR4302540.7988877/94‑1 (MQ=60)
TTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTC > SRR4302540.2429860/1‑94 (MQ=60)
GCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAG < SRR4302540.1027531/94‑1 (MQ=60)
GCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGAATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCA < SRR4302540.8003510/94‑1 (MQ=60)
GACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAA > SRR4302540.2889416/1‑94 (MQ=60)
CTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAA < SRR4302540.7285786/94‑1 (MQ=60)
CTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAA > SRR4302540.2811568/1‑94 (MQ=60)
CTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAA > SRR4302540.3387728/1‑94 (MQ=60)
CTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAA > SRR4302540.813106/1‑94 (MQ=60)
ATGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGGGCGTGGCGTTCAGCAAAAA < SRR4302540.7285787/94‑1 (MQ=60)
TGGGAATCGCGTTCCGATCCGTTATCGCGAGAGCGGGATAACTGTATTTCACTGTTGCGGGGAGGGATGAGTGAGCGTGGCGTGCAGCAAAAAT > SRR4302540.4101041/1‑94 (MQ=60)
ggtagCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCA < SRR4302540.5235726/89‑1 (MQ=60)
GGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCA < SRR4302540.5235727/94‑1 (MQ=60)
GAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCAC > SRR4302540.5534028/1‑94 (MQ=60)
AATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACT < SRR4302540.4730518/94‑1 (MQ=60)
AATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACT < SRR4302540.3322413/94‑1 (MQ=60)
AATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACT > SRR4302540.6417315/1‑94 (MQ=60)
ATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGGTGAGTGAGCGTGGCGTTCAGCAAAAATCACTG > SRR4302540.56840/1‑94 (MQ=60)
ATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTG < SRR4302540.8805550/94‑1 (MQ=60)
CGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC > SRR4302540.3285724/1‑94 (MQ=60)
CGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC < SRR4302540.5003560/94‑1 (MQ=60)
CGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC > SRR4302540.2875190/1‑94 (MQ=60)
GCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCG < SRR4302540.7813850/94‑1 (MQ=60)
CGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGG > SRR4302540.1515211/1‑94 (MQ=60)
GTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGCGAGCGTGGCGTTCAGCAAAAATCACTGGCGGC > SRR4302540.65716/1‑94 (MQ=60)
TCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCA > SRR4302540.379446/1‑94 (MQ=60)
TCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCA > SRR4302540.4550706/1‑94 (MQ=60)
TCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCA > SRR4302540.6400083/1‑94 (MQ=60)
CCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCAC > SRR4302540.5016534/1‑94 (MQ=60)
CGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACC > SRR4302540.1154652/1‑94 (MQ=60)
GATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACAC > SRR4302540.8299728/1‑94 (MQ=60)
GATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACAC > SRR4302540.9125743/1‑94 (MQ=60)
TCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTT < SRR4302540.3750939/94‑1 (MQ=60)
TCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTT > SRR4302540.4648094/1‑94 (MQ=60)
CCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTG > SRR4302540.7055758/1‑94 (MQ=60)
CCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTG > SRR4302540.7055757/1‑94 (MQ=60)
CCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTG > SRR4302540.2383525/1‑94 (MQ=60)
GTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAA < SRR4302540.2249564/94‑1 (MQ=60)
GTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAA < SRR4302540.9792510/94‑1 (MQ=60)
TTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAG > SRR4302540.9410294/1‑94 (MQ=60)
TATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGA < SRR4302540.6334998/94‑1 (MQ=60)
TATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGA > SRR4302540.8375417/1‑94 (MQ=60)
ATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAA > SRR4302540.1813884/1‑94 (MQ=60)
ATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAA < SRR4302540.2753000/94‑1 (MQ=60)
TCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAAT < SRR4302540.1945816/94‑1 (MQ=60)
TCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAAT > SRR4302540.9872556/1‑94 (MQ=60)
CGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATT < SRR4302540.543392/94‑1 (MQ=60)
CGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTAC > SRR4302540.1316390/1‑94 (MQ=60)
GAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACA < SRR4302540.1971629/94‑1 (MQ=60)
GAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACA < SRR4302540.233258/94‑1 (MQ=60)
GAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACA < SRR4302540.8295178/94‑1 (MQ=60)
GTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGC > SRR4302540.722465/1‑94 (MQ=60)
GTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGC < SRR4302540.5389347/94‑1 (MQ=60)
TGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCG < SRR4302540.43744/94‑1 (MQ=60)
TGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCG > SRR4302540.1698532/1‑94 (MQ=60)
GCGGGATAACTGTATTTCACTGTTGCGGGGAGTGTTGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCGG > SRR4302540.517659/1‑94 (MQ=60)
|
TTATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCGG > NC_000913/1721846‑1722031
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
