Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,721,938 |
A→G |
V598V (GTA→GTG) |
b1645 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,721,938 | 0 | A | G | 100.0%
| 634.5
/ NA
| 201 | V598V (GTA→GTG) | b1645 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (98/103); total (98/103) |
Only 100 of 204 total aligned reads displayed.
ATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACA > NC_000913/1721848‑1722027
|
attaCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCg > 1:1227747/1‑93 (MQ=255)
attaCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCg < 1:2391101/93‑1 (MQ=255)
ttaCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCgg < 1:2035422/93‑1 (MQ=255)
ttaCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCgg < 1:3660466/93‑1 (MQ=255)
ttaCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCgg < 2:5260389/93‑1 (MQ=255)
aCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGa < 2:634648/93‑1 (MQ=255)
aCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGa < 2:322619/93‑1 (MQ=255)
aCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGa < 2:2966722/93‑1 (MQ=255)
gCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATa > 1:5754005/1‑93 (MQ=255)
tGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAAc > 1:3934425/1‑93 (MQ=255)
ggggTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACt < 2:3897780/93‑1 (MQ=255)
gggTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTg < 2:3653565/93‑1 (MQ=255)
ggTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGt < 2:484483/93‑1 (MQ=255)
ggTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGt < 1:6078266/93‑1 (MQ=255)
tgtAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTAt < 1:4115470/93‑1 (MQ=255)
tAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTAttt > 1:845278/1‑93 (MQ=255)
gTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCa > 1:2647850/1‑93 (MQ=255)
gTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCa > 1:3589165/1‑93 (MQ=255)
gctgctGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACt < 1:3318444/93‑1 (MQ=255)
ctgctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTg > 2:4453621/1‑93 (MQ=255)
ctgctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTg < 1:4999902/93‑1 (MQ=255)
ctgctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTg < 1:1723120/93‑1 (MQ=255)
tgctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGt < 1:2141535/93‑1 (MQ=255)
gctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGtt > 1:121313/1‑93 (MQ=255)
gctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGtt < 2:4187702/93‑1 (MQ=255)
gctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGtt > 2:3561374/1‑93 (MQ=255)
ctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTg < 2:897089/93‑1 (MQ=255)
tgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGc > 1:155571/1‑93 (MQ=255)
tgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGc > 1:184108/1‑93 (MQ=255)
tgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGc > 2:584148/1‑93 (MQ=255)
gAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCg > 2:5852891/1‑93 (MQ=255)
gAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCg > 2:4111835/1‑93 (MQ=255)
aaCTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCgg < 1:954782/93‑1 (MQ=255)
aaCTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCgg > 2:5649651/1‑93 (MQ=255)
aaCTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCgg < 1:79042/93‑1 (MQ=255)
aCTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCggg > 2:3001122/1‑93 (MQ=255)
aCTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCggg < 2:6217938/93‑1 (MQ=255)
cTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCgggg < 2:2734131/93‑1 (MQ=255)
tGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGa > 1:4336470/1‑93 (MQ=255)
gTTCTCATGTTGTCTGGCAATTGCGCGACGGGGACTCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAg < 2:1422097/93‑1 (MQ=255)
tctcATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtg < 1:596700/93‑1 (MQ=255)
ctcATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtga < 1:3146156/93‑1 (MQ=255)
tcATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtgat > 1:5214721/1‑93 (MQ=255)
cATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtgatg > 1:2722675/1‑93 (MQ=255)
cATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtgatg > 1:45074/1‑93 (MQ=255)
aTGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtgatga > 1:2506117/1‑93 (MQ=255)
tgttgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgag > 2:5821895/1‑93 (MQ=255)
tgttgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgag < 1:4079853/93‑1 (MQ=255)
ttgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgagtg < 1:2431842/93‑1 (MQ=255)
tgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgagtga > 2:682043/1‑93 (MQ=255)
tgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGCGAtgagtga > 2:6281436/1‑93 (MQ=255)
gtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCTCTGTTGCGGGGAGTGAtgagtgag < 2:347235/93‑1 (MQ=255)
gtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgagtgag > 1:3228997/1‑93 (MQ=255)
tCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGc < 1:99404/93‑1 (MQ=255)
tCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGc > 1:287314/1‑93 (MQ=255)
tGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCgg > 1:6061275/1‑92 (MQ=255)
tGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGt < 2:4015841/93‑1 (MQ=255)
ggCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTg > 2:766968/1‑93 (MQ=255)
ggCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTg > 1:1260633/1‑93 (MQ=255)
gCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGGGATGAGTGAGCGTgg > 2:4671412/1‑93 (MQ=255)
cAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGc < 2:2095171/93‑1 (MQ=255)
cAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGc < 1:4971099/93‑1 (MQ=255)
aTTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGt > 2:4377568/1‑93 (MQ=255)
ttGCGCGACTGGGAATGGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCGCTGTTGCGGGGAGTGATGAGTGAGCGTGGCGtt < 1:2561922/93‑1 (MQ=255)
tGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTc > 2:814868/1‑93 (MQ=255)
gcgcGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCa < 2:2499197/93‑1 (MQ=255)
gcgcGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCa > 2:4956318/1‑93 (MQ=255)
gcgACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGc < 2:963831/93‑1 (MQ=255)
gcgACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGc < 1:614639/93‑1 (MQ=255)
cgACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCa < 2:3030196/93‑1 (MQ=255)
cTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCaaaa > 2:6192194/1‑93 (MQ=255)
cTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGGGATGAGTGAGCGTGGCGTTCAGCaaaa > 2:5700204/1‑93 (MQ=255)
tGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCaaaaa < 2:6060938/93‑1 (MQ=255)
tGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCaaaaa > 2:1742022/1‑93 (MQ=255)
gggAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAAt < 1:2778554/93‑1 (MQ=255)
aTCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACt < 1:2052433/93‑1 (MQ=255)
aTCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTCCAGCAAAAATCACt > 2:488372/1‑93 (MQ=255)
tCGCGTTGCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTg < 1:1107476/93‑1 (MQ=255)
tCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTg < 2:3979181/93‑1 (MQ=255)
gcgTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggc < 2:1207303/93‑1 (MQ=255)
gTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggcgg > 2:1366369/1‑93 (MQ=255)
ttCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggcggc > 2:5054491/1‑93 (MQ=255)
cGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCcac > 2:5157657/1‑93 (MQ=255)
cGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCcac < 2:2693752/93‑1 (MQ=255)
gATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCcaca < 1:542425/93‑1 (MQ=255)
tCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACt < 2:6151712/93‑1 (MQ=255)
tCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACt > 1:5418087/1‑93 (MQ=255)
ccGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACtt > 2:3928575/1‑93 (MQ=255)
ccGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACtt > 2:1054710/1‑93 (MQ=255)
gTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTga < 2:1906287/93‑1 (MQ=255)
gTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTga < 1:4254217/93‑1 (MQ=255)
ttATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTgaa > 1:5635298/1‑93 (MQ=255)
tATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTgaag > 1:4655132/1‑93 (MQ=255)
aTCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTgaaga > 1:4134266/1‑93 (MQ=255)
aTCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTgaaga > 1:385439/1‑93 (MQ=255)
tCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTgaagaa < 1:5142158/93‑1 (MQ=255)
cgcgAGTGCGGGATAACTTTATTTCACTGTGGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAAt < 2:3367032/93‑1 (MQ=255)
cgcgAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAAt > 2:3077374/1‑93 (MQ=255)
gcgAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAAtt < 2:5907927/93‑1 (MQ=255)
cgAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTa < 2:5800363/93‑1 (MQ=255)
|
ATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACA > NC_000913/1721848‑1722027
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTTATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCG > NC_000913/1721845‑1722030
|
GTTATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTG < SRR4302533.4269454/94‑1 (MQ=60)
GTTATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTG < SRR4302533.4136637/94‑1 (MQ=60)
GTTATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTG < SRR4302533.1235161/94‑1 (MQ=60)
TATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCG > SRR4302533.1235098/1‑94 (MQ=60)
ATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGG < SRR4302533.2405865/94‑1 (MQ=60)
ATTACGCTGGGGTGTAGTGCTGCTGAACTGTCCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGG < SRR4302533.988012/94‑1 (MQ=60)
TTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGG < SRR4302533.3682974/94‑1 (MQ=60)
TTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGG < SRR4302533.2047975/94‑1 (MQ=60)
TACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGA > SRR4302533.2053713/1‑94 (MQ=60)
CGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATA > SRR4302533.5788721/1‑94 (MQ=60)
CTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAAC > SRR4302533.3958442/1‑94 (MQ=60)
CTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAAC < SRR4302533.4051462/94‑1 (MQ=60)
GGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGT < SRR4302533.5296870/94‑1 (MQ=60)
GGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTA < SRR4302533.6115026/94‑1 (MQ=60)
GGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTA > SRR4302533.1871329/1‑94 (MQ=60)
GGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTA < SRR4302533.5527850/94‑1 (MQ=60)
GGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTA < SRR4302533.6075424/94‑1 (MQ=60)
GTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTAT > SRR4302533.3682878/1‑94 (MQ=60)
GTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTAT < SRR4302533.2450064/94‑1 (MQ=60)
TGTATTGCTGCTGACCTGTTCTCATGTTGTCTGTCAATGGCGCGACTGGGAATCGCGTTATGATCCGTTATCGCGAGTGCGGGATAACTGTATT < SRR4302533.4111275/94‑1 (MQ=60)
TGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATT < SRR4302533.4140475/94‑1 (MQ=60)
GTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTT > SRR4302533.850223/1‑94 (MQ=60)
GTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTT > SRR4302533.3217303/1‑94 (MQ=60)
AGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCA > SRR4302533.2664118/1‑94 (MQ=60)
AGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCA > SRR4302533.3611263/1‑94 (MQ=60)
TGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACT < SRR4302533.2066977/94‑1 (MQ=60)
TGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACT > SRR4302533.4816641/1‑94 (MQ=60)
GCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTG < SRR4302533.3338939/94‑1 (MQ=60)
CTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGT < SRR4302533.1733572/94‑1 (MQ=60)
CTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGT < SRR4302533.5030211/94‑1 (MQ=60)
TGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTT > SRR4302533.2705437/1‑94 (MQ=60)
TGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTT < SRR4302533.2154733/94‑1 (MQ=60)
TGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTT > SRR4302533.122079/1‑94 (MQ=60)
TGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTT > SRR4302533.5895946/1‑94 (MQ=60)
CTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGC > SRR4302533.156561/1‑94 (MQ=60)
CTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGC > SRR4302533.185253/1‑94 (MQ=60)
TGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCG > SRR4302533.5178164/1‑94 (MQ=60)
GAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGG > SRR4302533.4149974/1‑94 (MQ=60)
AACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGG < SRR4302533.79549/94‑1 (MQ=60)
AACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGG < SRR4302533.960388/94‑1 (MQ=60)
CTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGG > SRR4302533.1731292/1‑94 (MQ=60)
CTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGA > SRR4302533.5063012/1‑94 (MQ=60)
CTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGA > SRR4302533.4362603/1‑94 (MQ=60)
TGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAG > SRR4302533.57864/1‑94 (MQ=60)
TGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAG > SRR4302533.3915716/1‑94 (MQ=60)
TTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTG < SRR4302533.4587591/94‑1 (MQ=60)
TCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGA < SRR4302533.600218/94‑1 (MQ=60)
CTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAT < SRR4302533.3165502/94‑1 (MQ=60)
CTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAT > SRR4302533.5246122/1‑94 (MQ=60)
TCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATG > SRR4302533.45387/1‑94 (MQ=60)
TCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATG > SRR4302533.2739384/1‑94 (MQ=60)
TCATGTTGTCTGGCAATTGCGCGACTGGGAATAGCGTTCCGATCCGGTATCGCGAGTGCGGGATAACTGTCTTTCACTGTTGCGGGGAGCGATG > SRR4302533.2260342/1‑94 (MQ=60)
CATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGA > SRR4302533.2521568/1‑94 (MQ=60)
CATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGA < SRR4302533.1796178/94‑1 (MQ=60)
TGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGT < SRR4302533.4104688/94‑1 (MQ=60)
GTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTG < SRR4302533.136615/94‑1 (MQ=60)
TTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGA < SRR4302533.2446872/94‑1 (MQ=60)
TGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAG < SRR4302533.431869/94‑1 (MQ=60)
TGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAG > SRR4302533.3248905/1‑94 (MQ=60)
GTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGC > SRR4302533.289072/1‑94 (MQ=60)
GTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGC > SRR4302533.2416656/1‑94 (MQ=60)
TCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCG < SRR4302533.100020/94‑1 (MQ=60)
CTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGT > SRR4302533.1250674/1‑94 (MQ=60)
CTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGG > SRR4302533.6097966/1‑94 (MQ=60)
TGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTG > SRR4302533.1268173/1‑94 (MQ=60)
CAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCG < SRR4302533.3563683/94‑1 (MQ=60)
CAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCG < SRR4302533.5001239/94‑1 (MQ=60)
AATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGCATTTCACTTTTGCGGGGAGTGATGACTGAGCGTGGCGT > SRR4302533.3101028/1‑94 (MQ=60)
TTGCGCGACTGGGAATGGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCGCTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTC < SRR4302533.2577695/94‑1 (MQ=60)
TCGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTC < SRR4302533.2880772/94‑1 (MQ=60)
TGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCA < SRR4302533.2642178/94‑1 (MQ=60)
GCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCA < SRR4302533.618251/94‑1 (MQ=60)
CGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAA < SRR4302533.4009961/94‑1 (MQ=60)
CTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGCTGAGTGAGCGTGGCGTTCAGCAAAAA > SRR4302533.4379824/1‑94 (MQ=60)
CTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAA > SRR4302533.1227955/1‑94 (MQ=60)
GGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATC < SRR4302533.2795620/94‑1 (MQ=60)
AATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACT < SRR4302533.4265822/94‑1 (MQ=60)
AATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACT < SRR4302533.801264/94‑1 (MQ=60)
ATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTG < SRR4302533.2065097/94‑1 (MQ=60)
ATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTG > SRR4302533.412619/1‑94 (MQ=60)
TCGCGTTGCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGG < SRR4302533.1114041/94‑1 (MQ=60)
TCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGG > SRR4302533.3715130/1‑94 (MQ=60)
TCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGG < SRR4302533.887460/94‑1 (MQ=60)
CGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCGGCAAAAATCACTGGC < SRR4302533.2750011/94‑1 (MQ=60)
CGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC < SRR4302533.1133818/94‑1 (MQ=60)
CGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC < SRR4302533.3060288/94‑1 (MQ=60)
GTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGC < SRR4302533.2547253/94‑1 (MQ=60)
CGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACA < SRR4302533.5026839/94‑1 (MQ=60)
GATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACAC < SRR4302533.545646/94‑1 (MQ=60)
GATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACAC < SRR4302533.545644/94‑1 (MQ=60)
ATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACT > SRR4302533.5450678/1‑94 (MQ=60)
GTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAA > SRR4302533.5669377/1‑94 (MQ=60)
GTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAA < SRR4302533.4279871/94‑1 (MQ=60)
GTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAA > SRR4302533.3264453/1‑94 (MQ=60)
TTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAG > SRR4302533.6109898/1‑94 (MQ=60)
TTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAG > SRR4302533.4683343/1‑94 (MQ=60)
TATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGA > SRR4302533.387764/1‑94 (MQ=60)
TATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGA > SRR4302533.4159360/1‑94 (MQ=60)
TCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAAT < SRR4302533.5173235/94‑1 (MQ=60)
GAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACA < SRR4302533.6131597/94‑1 (MQ=60)
GAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACA > SRR4302533.6310434/1‑94 (MQ=60)
GTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGC > SRR4302533.3415703/1‑94 (MQ=60)
GTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGC > SRR4302533.936880/1‑94 (MQ=60)
TGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCG > SRR4302533.5881360/1‑94 (MQ=60)
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GTTATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCG > NC_000913/1721845‑1722030
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
