Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,738,433 |
T→C |
F167L (TTT→CTT) |
ydhC → |
putative transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,738,433 | 0 | T | C | 99.5%
| 686.3
/ NA
| 215 | F167L (TTT→CTT) | ydhC | putative transport protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (110/104); total (110/105) |
| Fisher's exact test for biased strand distribution p-value = 4.88e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 229 total aligned reads displayed.
GCCGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGTTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTT > NC_000913/1738342‑1738522
|
ccGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGctt > 2:8800802/1‑93 (MQ=255)
gCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGc > 1:161695/1‑93 (MQ=255)
gCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGc > 1:7037420/1‑93 (MQ=255)
gCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGc < 1:5373335/93‑1 (MQ=255)
gCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGc > 1:5172516/1‑93 (MQ=255)
tggtggGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCa > 1:34207/1‑93 (MQ=255)
tggtggGGCTATCTCTGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCa > 2:699849/1‑93 (MQ=255)
ggtggGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCAt < 1:9500991/93‑1 (MQ=255)
ggtggGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCAt < 2:6045238/93‑1 (MQ=255)
ggtggGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCAt < 2:7149475/93‑1 (MQ=255)
tggGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTa < 2:5553736/93‑1 (MQ=255)
gggTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCCTGCCATTAc > 2:971299/1‑93 (MQ=255)
ggTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGGTTTTCGCCACCCTGCTTGCCATTAcc > 1:5566485/1‑93 (MQ=255)
gTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCg < 2:1688372/93‑1 (MQ=255)
gTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCg > 1:825037/1‑93 (MQ=255)
tCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCgt > 2:2339630/1‑93 (MQ=255)
cTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCgtg > 1:4288003/1‑93 (MQ=255)
tATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCgtgg < 2:3755762/93‑1 (MQ=255)
aTCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCgtggt > 1:6932102/1‑93 (MQ=255)
tctcCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCgtggtg < 2:8469729/93‑1 (MQ=255)
tctcCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCgtggtg > 1:9613592/1‑93 (MQ=255)
tctcCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCgtgggg > 2:2038244/1‑91 (MQ=255)
ctcCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGc < 2:6186267/93‑1 (MQ=255)
tcCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTGGCCACCCTGCTTGCCATTACCGGGGTGCt > 1:4932261/1‑93 (MQ=255)
cGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGa < 1:2792700/93‑1 (MQ=255)
cGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGa < 2:1279490/93‑1 (MQ=255)
cGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGa > 2:5727487/1‑93 (MQ=255)
ggCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGAt > 1:3305912/1‑93 (MQ=255)
ggCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGAt > 2:9394711/1‑93 (MQ=255)
gCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGAtt > 1:6383501/1‑93 (MQ=255)
gCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGAtt > 1:2972048/1‑93 (MQ=255)
cACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCATGCTTGCCATTACCGTGGTGCTGATTc < 2:2703643/93‑1 (MQ=255)
cTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTg > 1:717295/1‑93 (MQ=255)
tGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGc > 2:7093525/1‑93 (MQ=255)
ggCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGcc > 1:7115819/1‑93 (MQ=255)
gCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCt > 1:9164288/1‑93 (MQ=255)
ctcctcTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTa < 1:1642579/93‑1 (MQ=255)
ctcctcTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTa < 1:8181487/93‑1 (MQ=255)
tcctcTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTAt < 1:7309833/93‑1 (MQ=255)
tcctcTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTAt > 1:9001223/1‑93 (MQ=255)
tcctcTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTAt < 2:6909789/93‑1 (MQ=255)
tcctcTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTAt > 2:5277361/1‑93 (MQ=255)
cctcTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTAtt < 1:3786235/93‑1 (MQ=255)
cctcTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTAtt > 1:9075548/1‑93 (MQ=255)
ctctGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTAttt < 2:7804044/93‑1 (MQ=255)
ctctGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTAttt > 2:589687/1‑93 (MQ=255)
ctctGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTAttt < 2:8611913/93‑1 (MQ=255)
ctGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTc > 2:3171745/1‑93 (MQ=255)
ctGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTc < 1:1323291/93‑1 (MQ=255)
tGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCt > 1:5692492/1‑93 (MQ=255)
gTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTg < 2:9361942/93‑1 (MQ=255)
gTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTg < 2:3130223/93‑1 (MQ=255)
tAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGc > 1:592258/1‑93 (MQ=255)
aaGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCaa > 2:8282921/1‑93 (MQ=255)
gctggctgCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAAc < 2:9577109/93‑1 (MQ=255)
gctggctgCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAAc > 2:491847/1‑93 (MQ=255)
ggctgCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCa < 1:2574632/93‑1 (MQ=255)
ggctgCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCa < 1:4622468/93‑1 (MQ=255)
tgttgGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGTTGGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCacga < 1:9326330/90‑1 (MQ=255)
gctgGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCacgac > 2:6139101/1‑93 (MQ=255)
ggTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGaa > 1:7297099/1‑93 (MQ=255)
gTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAg > 2:4449212/1‑93 (MQ=255)
tCCATTTTTCCTGGCAGGCGATTTTCGACACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAgg > 2:3623155/1‑93 (MQ=255)
ccATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGc > 1:4668740/1‑93 (MQ=255)
aTTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGccc > 1:104476/1‑93 (MQ=255)
aTTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGccc > 1:9663331/1‑93 (MQ=255)
tttttCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCg > 1:6576479/1‑93 (MQ=255)
tttttCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCg < 2:7740755/93‑1 (MQ=255)
tttttCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCg < 1:9108603/93‑1 (MQ=255)
tttttCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCg < 2:6297911/93‑1 (MQ=255)
ttttCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGt > 2:9547419/1‑93 (MQ=255)
ttttCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGt < 1:3127556/93‑1 (MQ=255)
ttCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTaa > 2:8008804/1‑93 (MQ=255)
tCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAAc > 1:6237364/1‑93 (MQ=255)
tCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAAc < 1:6007270/93‑1 (MQ=255)
tGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAAt > 1:8680633/1‑93 (MQ=255)
tGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAAt < 1:8739867/93‑1 (MQ=255)
ggCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGATCAAACCCACGACGAAGGACCGTAACAATa > 2:3270736/1‑93 (MQ=255)
aGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTc < 1:9332666/93‑1 (MQ=255)
aGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTc < 2:120420/93‑1 (MQ=255)
ggCGATTTTCGCCACCCTGCTTGCCCTTACCGTGGGGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCa > 2:1838966/1‑93 (MQ=255)
ggCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCa > 1:3953491/1‑93 (MQ=255)
ggCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCa < 2:6869286/93‑1 (MQ=255)
gATTTTCGCCCCCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGa < 1:9794665/93‑1 (MQ=255)
gATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGa < 1:222200/93‑1 (MQ=255)
aTTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGAt > 1:3111493/1‑93 (MQ=255)
ttttCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGGTg > 2:4061334/1‑93 (MQ=255)
tcttCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATg < 1:7866090/91‑1 (MQ=255)
tttCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATgg > 2:9173953/1‑93 (MQ=255)
ttCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGt < 2:9139070/93‑1 (MQ=255)
tCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTc < 2:4687973/93‑1 (MQ=255)
tCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTc < 1:3595117/93‑1 (MQ=255)
cGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCt < 2:9445457/93‑1 (MQ=255)
gCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTg > 2:262962/1‑93 (MQ=255)
gCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTg > 2:3211743/1‑93 (MQ=255)
ccACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGa < 1:5338309/93‑1 (MQ=255)
aCCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGAcc > 2:1432926/1‑93 (MQ=255)
cccTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGACGGCCCGTAACAATAGTAAGGATGGTCTGACCt > 1:3432913/1‑93 (MQ=255)
cccTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCt > 1:2505923/1‑93 (MQ=255)
ccTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCtt < 2:5159169/93‑1 (MQ=255)
|
GCCGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGTTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTT > NC_000913/1738342‑1738522
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCCGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGTTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTACCG > NC_000913/1738341‑1738526
|
TGCCGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCT < SRR4302540.3997491/94‑1 (MQ=60)
CGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGC > SRR4302540.5228810/1‑94 (MQ=60)
CGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGC > SRR4302540.8283200/1‑94 (MQ=60)
CGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGC > SRR4302540.335193/1‑94 (MQ=60)
CGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGC > SRR4302540.163320/1‑94 (MQ=60)
CGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGC > SRR4302540.7115651/1‑94 (MQ=60)
CGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGC > SRR4302540.7022716/1‑94 (MQ=60)
GCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCC < SRR4302540.5432406/94‑1 (MQ=60)
CTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCA > SRR4302540.34571/1‑94 (MQ=60)
GGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATT < SRR4302540.1339093/94‑1 (MQ=60)
GGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATT < SRR4302540.9613571/94‑1 (MQ=60)
GGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGGTTTTCGCCACCCTGCTTGCCATTACC > SRR4302540.5627782/1‑94 (MQ=60)
GGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACC < SRR4302540.5128286/94‑1 (MQ=60)
GGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACC < SRR4302540.8808911/94‑1 (MQ=60)
GGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCG > SRR4302540.1714200/1‑94 (MQ=60)
GGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCG > SRR4302540.5352979/1‑94 (MQ=60)
GGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCG > SRR4302540.833814/1‑94 (MQ=60)
GGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGAGATTTTCGCCACCCTGCTTGCCATTACCG < SRR4302540.1320838/94‑1 (MQ=60)
GTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGTTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGT < SRR4302540.7241879/94‑1 (MQ=60)
TCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTG > SRR4302540.4334650/1‑94 (MQ=60)
NTNTCTCNGNCACTGGCTCCNNNNTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGG < SRR4302540.3064961/94‑1 (MQ=60)
TATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGT > SRR4302540.6942655/1‑94 (MQ=60)
TATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGT > SRR4302540.7009243/1‑94 (MQ=60)
TATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGG > SRR4302540.6604234/1‑94 (MQ=60)
ATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTG < SRR4302540.3947693/94‑1 (MQ=60)
ATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTG < SRR4302540.5078373/94‑1 (MQ=60)
ATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTG > SRR4302540.9726940/1‑94 (MQ=60)
TCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGGTTTTCGCCACCCTGCTTGCCATTACCGTGGAGC > SRR4302540.4909593/1‑94 (MQ=60)
TCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGC < SRR4302540.3000286/94‑1 (MQ=60)
CTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTGGCCACCCTGCTTGCCATTACCGGGGTGCT > SRR4302540.4985451/1‑94 (MQ=60)
CTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCT < SRR4302540.3482250/94‑1 (MQ=60)
CGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGAT < SRR4302540.2822849/94‑1 (MQ=60)
CGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGAT > SRR4302540.3342112/1‑94 (MQ=60)
GGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATT > SRR4302540.3004881/1‑94 (MQ=60)
GGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATT > SRR4302540.6454563/1‑94 (MQ=60)
GGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATT > SRR4302540.6452688/1‑94 (MQ=60)
CACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCT > SRR4302540.4692350/1‑94 (MQ=60)
CACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCT > SRR4302540.9622847/1‑94 (MQ=60)
CACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCT > SRR4302540.3784686/1‑94 (MQ=60)
CACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCT > SRR4302540.9588397/1‑94 (MQ=60)
ACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTG > SRR4302540.724990/1‑94 (MQ=60)
TGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCC > SRR4302540.7195032/1‑94 (MQ=60)
TGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCC < SRR4302540.9744241/94‑1 (MQ=60)
GGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCT > SRR4302540.9274254/1‑94 (MQ=60)
CTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTAT < SRR4302540.1660526/94‑1 (MQ=60)
CTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTAT > SRR4302540.9109215/1‑94 (MQ=60)
CTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTAT < SRR4302540.8276518/94‑1 (MQ=60)
CTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGCGGTGCTGATTCTGCCTAT > SRR4302540.10101101/1‑94 (MQ=60)
TCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATT < SRR4302540.9261421/94‑1 (MQ=60)
TCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATT > SRR4302540.9184548/1‑94 (MQ=60)
TCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATT < SRR4302540.7391437/94‑1 (MQ=60)
TCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATT < SRR4302540.10110300/94‑1 (MQ=60)
CCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTT < SRR4302540.3827517/94‑1 (MQ=60)
CTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTT < SRR4302540.2534045/94‑1 (MQ=60)
CTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTT > SRR4302540.7356700/1‑94 (MQ=60)
CTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCT > SRR4302540.5755162/1‑94 (MQ=60)
CTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCT < SRR4302540.2698707/94‑1 (MQ=60)
CTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCT < SRR4302540.1337087/94‑1 (MQ=60)
TGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTG < SRR4302540.4350782/94‑1 (MQ=60)
GTTAGGAAGCTGGCTGCTGGTCCCTTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTGTTTTCTGC > SRR4302540.1653157/1‑94 (MQ=60)
GTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGGTTCTGCCTATTTTCTGG > SRR4302540.4599374/1‑94 (MQ=60)
TTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGC > SRR4302540.598631/1‑94 (MQ=60)
GGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCA > SRR4302540.3550977/1‑94 (MQ=60)
GAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAA < SRR4302540.7341717/94‑1 (MQ=60)
GCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACC < SRR4302540.7626697/94‑1 (MQ=60)
GCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACC > SRR4302540.2700698/1‑94 (MQ=60)
CTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCC < SRR4302540.5426836/94‑1 (MQ=60)
TGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCA > SRR4302540.5522534/1‑94 (MQ=60)
GGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCAC < SRR4302540.4672012/94‑1 (MQ=60)
GGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCAC < SRR4302540.2602383/94‑1 (MQ=60)
GGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCAC < SRR4302540.6206697/94‑1 (MQ=60)
TGTTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGTTGGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGAC < SRR4302540.9437564/94‑1 (MQ=60)
TGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGTTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGAC < SRR4302540.9437565/94‑1 (MQ=60)
TGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGAC < SRR4302540.7160807/94‑1 (MQ=60)
TGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGAC < SRR4302540.9252634/94‑1 (MQ=60)
TGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGAC > SRR4302540.8051027/1‑94 (MQ=60)
TGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACTCACGACGAA > SRR4302540.7378539/1‑94 (MQ=60)
TGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAA > SRR4302540.7378538/1‑94 (MQ=60)
GTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGG < SRR4302540.813580/94‑1 (MQ=60)
TCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGC > SRR4302540.4718711/1‑94 (MQ=60)
TCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGC < SRR4302540.9669502/94‑1 (MQ=60)
TCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGC < SRR4302540.9841574/94‑1 (MQ=60)
TCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGC > SRR4302540.4218293/1‑94 (MQ=60)
CATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCC > SRR4302540.9777071/1‑94 (MQ=60)
CATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCC > SRR4302540.105592/1‑94 (MQ=60)
CATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCC > SRR4302540.9154407/1‑94 (MQ=60)
ATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCG > SRR4302540.9048817/1‑94 (MQ=60)
ATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCG > SRR4302540.6649327/1‑94 (MQ=60)
TTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGT < SRR4302540.9218069/94‑1 (MQ=60)
TTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTA < SRR4302540.3161702/94‑1 (MQ=60)
TTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAAC > SRR4302540.6306758/1‑94 (MQ=60)
TCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACA < SRR4302540.6073878/94‑1 (MQ=60)
CCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAA < SRR4302540.5791794/94‑1 (MQ=60)
CTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAAT > SRR4302540.8781445/1‑94 (MQ=60)
CTGGCAGGCGATTGTCGCTACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTCTCTGGCTCAACCCCACGACGAAGGCCCGTAACAAT < SRR4302540.212230/94‑1 (MQ=60)
TGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATA < SRR4302540.8841326/94‑1 (MQ=60)
GCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGT > SRR4302540.6198079/1‑94 (MQ=60)
CAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTC > SRR4302540.3097580/1‑94 (MQ=60)
CAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTC > SRR4302540.3181179/1‑94 (MQ=60)
AGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCA > SRR4302540.3996156/1‑94 (MQ=60)
AGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCA < SRR4302540.9443940/94‑1 (MQ=60)
AGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCA > SRR4302540.3176961/1‑94 (MQ=60)
AGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCA < SRR4302540.7023601/94‑1 (MQ=60)
CGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGA > SRR4302540.6048791/1‑94 (MQ=60)
CGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGA < SRR4302540.3460377/94‑1 (MQ=60)
GATTTTCGCCCCCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGAT < SRR4302540.9909386/94‑1 (MQ=60)
GATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGAT < SRR4302540.8943736/94‑1 (MQ=60)
GATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGAT < SRR4302540.5693309/94‑1 (MQ=60)
GATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGAT > SRR4302540.3145527/1‑94 (MQ=60)
GATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGAT > SRR4302540.9328174/1‑94 (MQ=60)
GATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGAT < SRR4302540.224351/94‑1 (MQ=60)
TTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAAGCCACGACGAAGGCCCGTAACAATAGTCAGactgg > SRR4302540.5831355/1‑89 (MQ=60)
TCTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGG < SRR4302540.7957985/94‑1 (MQ=60)
TTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTC < SRR4302540.3159553/94‑1 (MQ=60)
TTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTC < SRR4302540.2376182/94‑1 (MQ=60)
TCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCT < SRR4302540.3634397/94‑1 (MQ=60)
CGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTG < SRR4302540.8372144/94‑1 (MQ=60)
CCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGAC < SRR4302540.5396834/94‑1 (MQ=60)
ACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGACGGCCCGTAACAATAGTAAGGATGGTCTGACCT > SRR4302540.3470228/1‑94 (MQ=60)
ACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCT > SRR4302540.2532978/1‑94 (MQ=60)
ACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCT > SRR4302540.5673351/1‑94 (MQ=60)
CCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTT < SRR4302540.9202982/94‑1 (MQ=60)
TGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTAC < SRR4302540.4168630/94‑1 (MQ=60)
TGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTAC < SRR4302540.1120252/94‑1 (MQ=60)
TGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTAC > SRR4302540.286782/1‑94 (MQ=60)
TGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTAC > SRR4302540.5236280/1‑94 (MQ=60)
GCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTACC < SRR4302540.791047/94‑1 (MQ=60)
GCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTACC < SRR4302540.9218221/94‑1 (MQ=60)
CTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTACCG < SRR4302540.7671578/94‑1 (MQ=60)
CTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTACCG < SRR4302540.7246821/94‑1 (MQ=60)
|
TGCCGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGTTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTACCG > NC_000913/1738341‑1738526
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
