Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,738,433 |
T→C |
F167L (TTT→CTT) |
ydhC → |
putative transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,738,433 | 0 | T | C | 100.0%
| 567.3
/ NA
| 176 | F167L (TTT→CTT) | ydhC | putative transport protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (82/94); total (82/94) |
Only 100 of 179 total aligned reads displayed.
CGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGTTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTT > NC_000913/1738344‑1738522
|
cGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTg > 1:5347324/1‑93 (MQ=255)
gCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGc > 1:3720454/1‑93 (MQ=255)
gCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGc > 1:3043384/1‑93 (MQ=255)
tggtggGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCa < 1:2868598/93‑1 (MQ=255)
ggtggGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCAt > 1:2130435/1‑93 (MQ=255)
gggTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTAc < 1:2145299/93‑1 (MQ=255)
tCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCgt > 2:1206275/1‑93 (MQ=255)
tCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCgt < 2:5287408/93‑1 (MQ=255)
tCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCgt > 2:1053666/1‑93 (MQ=255)
tCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCgt < 1:39186/93‑1 (MQ=255)
cTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCgtg < 1:1954921/93‑1 (MQ=255)
tATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCgtgg < 1:3454648/93‑1 (MQ=255)
aTCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCgtggt > 1:6175137/1‑93 (MQ=255)
aTCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCgtggt > 2:1637750/1‑93 (MQ=255)
tcCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCt < 1:3318090/93‑1 (MQ=255)
tcCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCt > 1:1906676/1‑93 (MQ=255)
tcCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCt > 2:458539/1‑93 (MQ=255)
ccGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTg > 2:6153578/1‑93 (MQ=255)
ccGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTg > 2:2850693/1‑93 (MQ=255)
gCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGAtt < 1:6025409/93‑1 (MQ=255)
cACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTc > 1:3740062/1‑93 (MQ=255)
cTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTg > 2:4836914/1‑93 (MQ=255)
cTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTg > 1:4174456/1‑93 (MQ=255)
tGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGc > 1:2729132/1‑93 (MQ=255)
gCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCt > 2:3968751/1‑93 (MQ=255)
gCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCt < 2:1603823/93‑1 (MQ=255)
ctcctcTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTa < 1:4614043/93‑1 (MQ=255)
tcctcTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTAt > 2:5819546/1‑93 (MQ=255)
tcctcTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTAt > 2:4830261/1‑93 (MQ=255)
cctcTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTAtt > 2:2460794/1‑93 (MQ=255)
cctcTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTAtt < 1:1671877/93‑1 (MQ=255)
tctGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTAtttt < 1:4266938/93‑1 (MQ=255)
ctGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTc < 1:3813780/93‑1 (MQ=255)
ctGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTc > 2:192921/1‑93 (MQ=255)
tGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCt < 1:1036722/93‑1 (MQ=255)
tGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCt > 1:5797516/1‑93 (MQ=255)
ttAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTgg < 2:4790375/93‑1 (MQ=255)
tAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGc > 1:287127/1‑93 (MQ=255)
ggAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTc > 2:5312235/1‑93 (MQ=255)
gaGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCaa < 2:1543068/92‑1 (MQ=255)
aaGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCaa < 1:4846451/93‑1 (MQ=255)
aGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCaaa < 2:4572556/93‑1 (MQ=255)
gctggctgCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAAc < 1:3245927/93‑1 (MQ=255)
tggctgCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAAccc < 2:1082648/93‑1 (MQ=255)
tggctgCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAAccc > 2:1071469/1‑93 (MQ=255)
ggctgCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCa < 2:520479/93‑1 (MQ=255)
ggctgCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCa > 1:3021206/1‑93 (MQ=255)
gctgctGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCac > 2:6007104/1‑93 (MQ=255)
gctgctGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCac > 2:1483284/1‑93 (MQ=255)
gctgctGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCac > 2:1546871/1‑93 (MQ=255)
gctgctGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCac < 2:742508/93‑1 (MQ=255)
gctgctGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCac > 1:107558/1‑93 (MQ=255)
gctgctGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCac < 2:5248923/93‑1 (MQ=255)
gctgctGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCac < 1:3001899/93‑1 (MQ=255)
ctgctgGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCacg < 2:3252958/93‑1 (MQ=255)
gctgGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCacgac < 1:915469/93‑1 (MQ=255)
ggTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGaa > 1:1263486/1‑93 (MQ=255)
ggTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGaa > 1:5370039/1‑93 (MQ=255)
gTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAg > 1:2607512/1‑93 (MQ=255)
gTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAg > 1:4852238/1‑93 (MQ=255)
tCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAgg < 1:399538/93‑1 (MQ=255)
tCCATTTTTCCTGGCAGGCAATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAgg > 1:3684482/1‑93 (MQ=255)
ccATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGc > 1:330548/1‑93 (MQ=255)
cATTTTTCCTGGCAGGCGATTTTCGCCACTCTGCTTACCATTCCCGTTGTGCTGATTCTGCCTAGTTTCTGGCTCAAACCCACGACGaacgtc > 2:4657289/1‑89 (MQ=255)
cATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGcc < 2:3066953/93‑1 (MQ=255)
cATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGcc > 2:4948270/1‑93 (MQ=255)
ttttCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGt > 1:5112074/1‑93 (MQ=255)
ttCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTaa > 1:4138525/1‑93 (MQ=255)
tGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAAt < 2:5001248/93‑1 (MQ=255)
tGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAAt < 1:6229677/93‑1 (MQ=255)
tGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAAt < 2:358183/93‑1 (MQ=255)
ggCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATa < 2:2438177/93‑1 (MQ=255)
gCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAg < 2:134863/93‑1 (MQ=255)
gCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAg < 1:3547307/93‑1 (MQ=255)
cAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGt > 2:1752934/1‑93 (MQ=255)
cAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGt > 2:4306999/1‑93 (MQ=255)
aGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTc > 1:4291205/1‑93 (MQ=255)
aGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTc > 1:208580/1‑93 (MQ=255)
aGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTc > 2:4070888/1‑93 (MQ=255)
ggCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCa > 2:1017380/1‑93 (MQ=255)
ggCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCa < 1:2345397/93‑1 (MQ=255)
ggCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCACGTAACATTAGTCa > 2:3203408/1‑93 (MQ=255)
gCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAg < 2:4002000/93‑1 (MQ=255)
gCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAg < 2:343246/93‑1 (MQ=255)
gATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGa < 2:2093020/93‑1 (MQ=255)
ttttCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATg < 1:2188178/93‑1 (MQ=255)
tCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTc > 2:799264/1‑93 (MQ=255)
tCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTc < 2:667447/93‑1 (MQ=255)
cGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCt < 2:2555195/93‑1 (MQ=255)
cGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCt < 1:1862757/93‑1 (MQ=255)
gCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTg < 2:3499369/93‑1 (MQ=255)
ccACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGa > 2:1835408/1‑93 (MQ=255)
ccACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGa > 1:2056191/1‑93 (MQ=255)
cACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGAc > 1:3162894/1‑93 (MQ=255)
cACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGAc < 2:4551111/93‑1 (MQ=255)
aCCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGAcc > 2:1727502/1‑93 (MQ=255)
aCCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGAcc > 2:557336/1‑93 (MQ=255)
cccTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCt > 1:5663538/1‑93 (MQ=255)
cTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCttt > 1:569227/1‑93 (MQ=255)
cTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCttt > 1:2232683/1‑93 (MQ=255)
|
CGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGTTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTT > NC_000913/1738344‑1738522
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATGCCGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGTTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTACCG > NC_000913/1738340‑1738526
|
ATGCCGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGC > SRR4302533.974067/1‑94 (MQ=60)
GCCGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTT < SRR4302533.2089657/94‑1 (MQ=60)
CCGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTG > SRR4302533.5379403/1‑94 (MQ=60)
CGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGC > SRR4302533.3062014/1‑94 (MQ=60)
CGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGC > SRR4302533.3743286/1‑94 (MQ=60)
TGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCAT < SRR4302533.2886247/94‑1 (MQ=60)
TGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCAT < SRR4302533.2886246/94‑1 (MQ=60)
TGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCAT > SRR4302533.2143570/1‑94 (MQ=60)
GGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATT < SRR4302533.5763869/94‑1 (MQ=60)
TGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTAC < SRR4302533.1677609/94‑1 (MQ=60)
GGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACC < SRR4302533.2158512/94‑1 (MQ=60)
TCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTG < SRR4302533.3225862/94‑1 (MQ=60)
TCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTG < SRR4302533.39447/94‑1 (MQ=60)
TCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTG < SRR4302533.3379514/94‑1 (MQ=60)
CTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGG < SRR4302533.1966832/94‑1 (MQ=60)
CTATCTCCGGCACTGGCTCCTCCGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGG > SRR4302533.3715047/1‑94 (MQ=60)
TATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGT > SRR4302533.6212242/1‑94 (MQ=60)
TATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGT < SRR4302533.3475971/94‑1 (MQ=60)
TATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGG > SRR4302533.100439/1‑94 (MQ=60)
TCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGC < SRR4302533.2170964/94‑1 (MQ=60)
CTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCT > SRR4302533.1918306/1‑94 (MQ=60)
CTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCT < SRR4302533.3324108/94‑1 (MQ=60)
CTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCT > SRR4302533.4020817/1‑94 (MQ=60)
TCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTG < SRR4302533.3338583/94‑1 (MQ=60)
CCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGA > SRR4302533.5219158/1‑94 (MQ=60)
GCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTC > SRR4302533.3763000/1‑94 (MQ=60)
GCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTC < SRR4302533.6061920/94‑1 (MQ=60)
ACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTG > SRR4302533.4199752/1‑94 (MQ=60)
CTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGC > SRR4302533.2745872/1‑94 (MQ=60)
TGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCGTTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCC < SRR4302533.3820275/94‑1 (MQ=60)
GGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCT < SRR4302533.3849161/94‑1 (MQ=60)
CTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTAT < SRR4302533.4641992/94‑1 (MQ=60)
CCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTT < SRR4302533.1681983/94‑1 (MQ=60)
CCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTT > SRR4302533.2237190/1‑94 (MQ=60)
TCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTC < SRR4302533.4292633/94‑1 (MQ=60)
CTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCT < SRR4302533.3837103/94‑1 (MQ=60)
CTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCT > SRR4302533.5832542/1‑94 (MQ=60)
TGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTG < SRR4302533.1042816/94‑1 (MQ=60)
GTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGG < SRR4302533.3127218/94‑1 (MQ=60)
TTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGC < SRR4302533.646124/94‑1 (MQ=60)
TTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGC > SRR4302533.288885/1‑94 (MQ=60)
TAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCT < SRR4302533.4001684/94‑1 (MQ=60)
AAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAA < SRR4302533.4875824/94‑1 (MQ=60)
AAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAA > SRR4302533.3618626/1‑94 (MQ=60)
AAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAA < SRR4302533.2760001/94‑1 (MQ=60)
GCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACC < SRR4302533.3265938/94‑1 (MQ=60)
GCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACC < SRR4302533.3004191/94‑1 (MQ=60)
CTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCC < SRR4302533.4247016/94‑1 (MQ=60)
TGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCA > SRR4302533.3039694/1‑94 (MQ=60)
GGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCAC > SRR4302533.108235/1‑94 (MQ=60)
GCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACG < SRR4302533.3525321/94‑1 (MQ=60)
GCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACG < SRR4302533.3020257/94‑1 (MQ=60)
TGCTGGTCCATTTTTCCTGGCAGGCGATTGTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGAC < SRR4302533.1688717/94‑1 (MQ=60)
GCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACG < SRR4302533.920848/94‑1 (MQ=60)
CTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGA > SRR4302533.4315568/1‑94 (MQ=60)
TGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAA > SRR4302533.1271045/1‑94 (MQ=60)
TGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAA > SRR4302533.5402304/1‑94 (MQ=60)
TGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAA < SRR4302533.499972/94‑1 (MQ=60)
GGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAG > SRR4302533.4881642/1‑94 (MQ=60)
GGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAG > SRR4302533.2623526/1‑94 (MQ=60)
GTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGG < SRR4302533.3032460/94‑1 (MQ=60)
GTCCATTTTTCCTGGCAGGCAATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGG > SRR4302533.3707129/1‑94 (MQ=60)
TCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGC < SRR4302533.401950/94‑1 (MQ=60)
TCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGC > SRR4302533.332569/1‑94 (MQ=60)
ATTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCG < SRR4302533.2538519/94‑1 (MQ=60)
TTTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGT > SRR4302533.5142967/1‑94 (MQ=60)
TTTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTA > SRR4302533.2276465/1‑94 (MQ=60)
TTTCCTGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAA > SRR4302533.4163630/1‑94 (MQ=60)
TGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATA > SRR4302533.1957913/1‑94 (MQ=60)
TGGCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATA < SRR4302533.6266990/94‑1 (MQ=60)
GCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGT < SRR4302533.3569172/94‑1 (MQ=60)
GCAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGT < SRR4302533.1098134/94‑1 (MQ=60)
CAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTC > SRR4302533.4317011/1‑94 (MQ=60)
CAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTC > SRR4302533.209900/1‑94 (MQ=60)
CAGGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTC > SRR4302533.2130638/1‑94 (MQ=60)
GGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAG > SRR4302533.6103306/1‑94 (MQ=60)
GGCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAG < SRR4302533.2359913/94‑1 (MQ=60)
GCGATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGG < SRR4302533.5867239/94‑1 (MQ=60)
GATTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGACCGTAACAATAGTCAGGAT > SRR4302533.2071414/1‑94 (MQ=60)
TTTTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGG < SRR4302533.2201659/94‑1 (MQ=60)
TTCGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTC > SRR4302533.5393312/1‑94 (MQ=60)
CGCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTG < SRR4302533.1874117/94‑1 (MQ=60)
GCCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGA > SRR4302533.2068875/1‑94 (MQ=60)
CCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGAC > SRR4302533.569710/1‑94 (MQ=60)
CCACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGAC > SRR4302533.3182363/1‑94 (MQ=60)
ACCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCT > SRR4302533.5697756/1‑94 (MQ=60)
CCCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTTTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTT > SRR4302533.4606078/1‑94 (MQ=60)
CCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTT > SRR4302533.2246460/1‑94 (MQ=60)
CCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTT > SRR4302533.572593/1‑94 (MQ=60)
CCTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTT < SRR4302533.4825345/94‑1 (MQ=60)
CTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTA > SRR4302533.5667784/1‑94 (MQ=60)
CTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTA < SRR4302533.2027992/94‑1 (MQ=60)
CTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTA > SRR4302533.2797811/1‑94 (MQ=60)
CTGCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTA > SRR4302533.3590311/1‑94 (MQ=60)
GCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTACC > SRR4302533.3462957/1‑94 (MQ=60)
GCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTACC < SRR4302533.5859389/94‑1 (MQ=60)
GCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTACC > SRR4302533.6268352/1‑94 (MQ=60)
GCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTACC < SRR4302533.255489/94‑1 (MQ=60)
GCTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTACC < SRR4302533.3207569/94‑1 (MQ=60)
CTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTACCG > SRR4302533.3707010/1‑94 (MQ=60)
CTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTACCG < SRR4302533.621880/94‑1 (MQ=60)
CTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTACCG > SRR4302533.4295651/1‑94 (MQ=60)
|
ATGCCGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGTTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTACCG > NC_000913/1738340‑1738526
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
