Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,847,298	A→G	K146K (AAA→AAG)	sppA →	protease IV

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,847,298	0	A	G	100.0%	819.5 / NA	255	K146K (AAA→AAG)	sppA	protease IV
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (120/135); total (120/135)

Only 100 of 262 total aligned reads displayed.

TGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGT  >  NC_000913/1847208‑1847387

   gATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGt                                                                                      >  2:6534771/1‑93 (MQ=255)

   gATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGt                                                                                      <  1:8286468/93‑1 (MQ=255)

     tGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGttt                                                                                    >  1:8451360/1‑93 (MQ=255)

      ggATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTa                                                                                   <  1:4487864/93‑1 (MQ=255)

      ggATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTa                                                                                   <  1:8914812/93‑1 (MQ=255)

      ggATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTa                                                                                   <  2:7794704/93‑1 (MQ=255)

      ggATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTa                                                                                   <  2:7484132/93‑1 (MQ=255)

       gATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTAt                                                                                  >  1:4677266/1‑93 (MQ=255)

        aTCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATg                                                                                 <  1:5792923/93‑1 (MQ=255)

         tCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGc                                                                                >  2:5025254/1‑93 (MQ=255)

         tCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGc                                                                                >  2:4648004/1‑93 (MQ=255)

          cTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGcc                                                                               <  2:9592310/93‑1 (MQ=255)

            gAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGt                                                                             <  1:8750018/93‑1 (MQ=255)

              aaaaCTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTg                                                                           >  1:4854175/1‑93 (MQ=255)

               aaaCTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTgg                                                                          <  1:3062546/93‑1 (MQ=255)

               aaaCTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTgg                                                                          >  1:787734/1‑93 (MQ=255)

                 aCTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCg                                                                        <  2:3480393/93‑1 (MQ=255)

                   ttCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCgag                                                                      >  2:3154377/1‑93 (MQ=255)

                   ttCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGCTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCgag                                                                      >  1:1772481/1‑93 (MQ=255)

                         ggcggcGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTAc                                                                <  2:3735398/93‑1 (MQ=255)

                         ggcggcGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTAc                                                                >  2:527608/1‑93 (MQ=255)

                         ggcggcGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTAc                                                                <  1:5343245/93‑1 (MQ=255)

                         ggcggcGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGGTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTAc                                                                >  2:869762/1‑93 (MQ=255)

                          gcggcgACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACa                                                               >  2:4204281/1‑93 (MQ=255)

                          gcggcgACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACa                                                               >  1:2758959/1‑93 (MQ=255)

                          gcggcgACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACa                                                               <  1:7483545/93‑1 (MQ=255)

                           cggcgACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAg                                                              <  1:7190812/93‑1 (MQ=255)

                            ggcgACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGc                                                             <  2:269097/93‑1 (MQ=255)

                             gcgACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGcc                                                            >  1:6768373/1‑93 (MQ=255)

                             gcgACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGCTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGCACTACAGcc                                                            >  1:819886/1‑93 (MQ=255)

                              cgACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCa                                                           <  1:6346495/93‑1 (MQ=255)

                              cgACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCa                                                           <  2:7445536/93‑1 (MQ=255)

                               gACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAg                                                          <  2:2711557/93‑1 (MQ=255)

                               gACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAg                                                          <  1:4084220/93‑1 (MQ=255)

                               gACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAg                                                          <  1:3520572/93‑1 (MQ=255)

                                aCCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGTGAACTACAGCCAgg                                                         >  1:2722443/1‑93 (MQ=255)

                                aCCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAgg                                                         >  1:4731425/1‑93 (MQ=255)

                                aCCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAgg                                                         <  2:9201440/93‑1 (MQ=255)

                                  cAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAgggg                                                       <  2:1379903/93‑1 (MQ=255)

                                  cAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAgggg                                                       <  1:1114670/93‑1 (MQ=255)

                                       gTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAata                                                  >  2:512166/1‑93 (MQ=255)

                                        tCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAatat                                                 <  1:3841318/93‑1 (MQ=255)

                                         cTATGCAGTCCATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAAtatt                                                <  2:5591476/93‑1 (MQ=255)

                                         cTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAAtatt                                                <  2:1936174/93‑1 (MQ=255)

                                          tATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAAtatta                                               <  2:5471236/93‑1 (MQ=255)

                                           aTGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAAtattat                                              <  1:902332/93‑1 (MQ=255)

                                            tGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTAtc                                             <  1:6746160/93‑1 (MQ=255)

                                             gCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTAtct                                            >  1:9974578/1‑93 (MQ=255)

                                              cAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTAtctc                                           <  1:1972526/93‑1 (MQ=255)

                                              cAGTACATCGGCAAAGCTCTAAAAGAGTTTCGTGACAGCGGGACGCGGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTAtctc                                           <  2:6071395/93‑1 (MQ=255)

                                               aGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCg                                          >  2:8050649/1‑93 (MQ=255)

                                                 tACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGcc                                        >  1:3897578/1‑93 (MQ=255)

                                                  aCATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCa                                       >  2:7141077/1‑93 (MQ=255)

                                                   cATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAg                                      >  1:9501354/1‑93 (MQ=255)

                                                   cATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAg                                      >  2:111082/1‑93 (MQ=255)

                                                   cATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAg                                      <  2:7308998/93‑1 (MQ=255)

                                                   cATCGCCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTGTATGCCGTGGGCGAGAACTACAGCCAGGGGCAATATTAACTCGCCAg                                      <  2:9022011/93‑1 (MQ=255)

                                                    aTCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGt                                     >  1:8206985/1‑93 (MQ=255)

                                                    aTCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGt                                     >  1:7601440/1‑93 (MQ=255)

                                                     tCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGtt                                    <  1:4165147/93‑1 (MQ=255)

                                                     tCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGtt                                    >  1:6508153/1‑93 (MQ=255)

                                                       ggCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTc                                  >  2:8916931/1‑93 (MQ=255)

                                                        gCAAAGCTCTGAAGGAGTTTCGTGACAGCGGGACGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCg                                 <  1:8961705/93‑1 (MQ=255)

                                                        gCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCg                                 <  2:4691941/93‑1 (MQ=255)

                                                         cAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGc                                >  1:8579477/1‑93 (MQ=255)

                                                         cAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGc                                <  2:7008626/93‑1 (MQ=255)

                                                           aaGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCa                              >  1:5986448/1‑93 (MQ=255)

                                                            aGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCaa                             <  1:3436600/93‑1 (MQ=255)

                                                            aGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCaa                             <  1:1084092/93‑1 (MQ=255)

                                                             gCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAAt                            <  2:3608865/93‑1 (MQ=255)

                                                             gCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAAt                            <  1:2978470/93‑1 (MQ=255)

                                                                 tGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATaaaa                        >  1:3739922/1‑93 (MQ=255)

                                                                 tGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATaaaa                        >  1:9435740/1‑93 (MQ=255)

                                                                 tGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATaaaa                        <  2:5824906/93‑1 (MQ=255)

                                                                  gAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAAt                       <  2:7909207/93‑1 (MQ=255)

                                                                  gAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAAt                       >  2:2156065/1‑93 (MQ=255)

                                                                   aaaGAGTTTCGTGAGAGCGGGAAGCAGGTTTATGCCGTTGGCGAGGACTACAGCCAGGGGCAATATTATCTCGCCAGTTTGGCCACTAAAAtt                      >  2:4048087/1‑93 (MQ=255)

                                                                   aaaGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAAtt                      <  2:8190188/93‑1 (MQ=255)

                                                                   aaaGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAAtt                      >  2:2900883/1‑93 (MQ=255)

                                                                    aaGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAAttt                     >  1:4336103/1‑93 (MQ=255)

                                                                    aaGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAAttt                     >  1:9881871/1‑93 (MQ=255)

                                                                     agagTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTg                    >  2:872954/1‑93 (MQ=255)

                                                                       agTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGc                  <  1:1332145/93‑1 (MQ=255)

                                                                       agTGTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGc                  <  1:199280/93‑1 (MQ=255)

                                                                        gTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCt                 <  2:9430848/93‑1 (MQ=255)

                                                                        gTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCt                 >  1:2631232/1‑93 (MQ=255)

                                                                         tttCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTg                >  2:2366464/1‑93 (MQ=255)

                                                                           tCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGtc              <  1:2381233/93‑1 (MQ=255)

                                                                           tCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGtc              <  1:5641373/93‑1 (MQ=255)

                                                                            cGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGtct             <  1:6607158/93‑1 (MQ=255)

                                                                            cGTGACAGCGGGAAGCCGGTTTATGCCGTAGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGtct             <  1:6028169/93‑1 (MQ=255)

                                                                              tGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTcc           >  1:4583957/1‑93 (MQ=255)

                                                                              tGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTcc           <  1:1830148/93‑1 (MQ=255)

                                                                                aCAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGc         >  1:6136454/1‑93 (MQ=255)

                                                                                  aGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCaa       >  1:7348531/1‑93 (MQ=255)

                                                                                   gCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAg      >  1:2209598/1‑93 (MQ=255)

                                                                                   gCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAg      <  1:8800887/93‑1 (MQ=255)

                                                                                   gCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAg      <  1:9051454/93‑1 (MQ=255)

                                                                                   gCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAg      >  2:6303226/1‑93 (MQ=255)

                                                                                       gAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGt  <  1:3284184/93‑1 (MQ=255)

TGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGT  >  NC_000913/1847208‑1847387

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGG  >  NC_000913/1847205‑1847389

TATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAG                                                                                             >  SRR4302540.3501357/1‑94 (MQ=60)

TATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTACGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAG                                                                                             >  SRR4302540.2971509/1‑94 (MQ=60)

 ATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGC                                                                                            >  SRR4302540.8995956/1‑94 (MQ=60)

   TGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCG                                                                                          >  SRR4302540.6753261/1‑94 (MQ=60)

     TGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGT                                                                                        >  SRR4302540.1805967/1‑94 (MQ=60)

      GATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTT                                                                                       <  SRR4302540.8382708/94‑1 (MQ=60)

       ATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTT                                                                                      >  SRR4302540.8549476/1‑94 (MQ=60)

        TGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTA                                                                                     <  SRR4302540.906407/94‑1 (MQ=60)

         tgagCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTAT                                                                                    <  SRR4302540.9018057/90‑1 (MQ=60)

         GGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTAT                                                                                    >  SRR4302540.4727313/1‑94 (MQ=60)

         GGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTAT                                                                                    <  SRR4302540.3018209/94‑1 (MQ=60)

         GGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTAT                                                                                    <  SRR4302540.4536536/94‑1 (MQ=60)

         GGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTAT                                                                                    <  SRR4302540.9138876/94‑1 (MQ=60)

         GGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTAT                                                                                    <  SRR4302540.9018055/94‑1 (MQ=60)

          GATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATG                                                                                   <  SRR4302540.2481700/94‑1 (MQ=60)

          GATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATG                                                                                   <  SRR4302540.3755146/94‑1 (MQ=60)

          GATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGGTTATG                                                                                   >  SRR4302540.58383/1‑94 (MQ=60)

           ATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGC                                                                                  <  SRR4302540.5856929/94‑1 (MQ=60)

               GAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTT                                                                              <  SRR4302540.8851550/94‑1 (MQ=60)

                AAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTG                                                                             >  SRR4302540.4906213/1‑94 (MQ=60)

                AAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTG                                                                             >  SRR4302540.4906215/1‑94 (MQ=60)

                AAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTG                                                                             <  SRR4302540.4637621/94‑1 (MQ=60)

                 AAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGG                                                                            >  SRR4302540.796110/1‑94 (MQ=60)

                 AAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGG                                                                            <  SRR4302540.3994728/94‑1 (MQ=60)

                  AAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGC                                                                           <  SRR4302540.3096146/94‑1 (MQ=60)

                     CTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAG                                                                        <  SRR4302540.3803265/94‑1 (MQ=60)

                     CTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAG                                                                        <  SRR4302540.1819412/94‑1 (MQ=60)

                     CTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGCTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAG                                                                        >  SRR4302540.1791716/1‑94 (MQ=60)

                      TTCGCAGGCGGCGACCAACCGTCTACGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGA                                                                       >  SRR4302540.1938041/1‑94 (MQ=60)

                       TCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAA                                                                      <  SRR4302540.7380317/94‑1 (MQ=60)

                        CGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAAC                                                                     <  SRR4302540.4639675/94‑1 (MQ=60)

                        CGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAAC                                                                     >  SRR4302540.4209387/1‑94 (MQ=60)

                        CGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAAC                                                                     >  SRR4302540.4144889/1‑94 (MQ=60)

                        CGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAAC                                                                     >  SRR4302540.5541055/1‑94 (MQ=60)

                         GCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACT                                                                    <  SRR4302540.4875674/94‑1 (MQ=60)

                         GCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACT                                                                    >  SRR4302540.6659825/1‑94 (MQ=60)

                           AGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTAC                                                                  >  SRR4302540.3843863/1‑94 (MQ=60)

                            GGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACA                                                                 <  SRR4302540.7069889/94‑1 (MQ=60)

                            GGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACA                                                                 <  SRR4302540.2710455/94‑1 (MQ=60)

                            GGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACA                                                                 <  SRR4302540.5401853/94‑1 (MQ=60)

                            GGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACA                                                                 <  SRR4302540.284293/94‑1 (MQ=60)

                            GGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACA                                                                 >  SRR4302540.2788765/1‑94 (MQ=60)

                            GGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACA                                                                 >  SRR4302540.2788764/1‑94 (MQ=60)

                            GGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACA                                                                 <  SRR4302540.2080419/94‑1 (MQ=60)

                             GCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAG                                                                <  SRR4302540.7567076/94‑1 (MQ=60)

                             GCGGCGACCAACCGTCTATGCAGTACAGCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAG                                                                <  SRR4302540.7567084/94‑1 (MQ=60)

                              CGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGC                                                               <  SRR4302540.5896728/94‑1 (MQ=60)

                              CGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGC                                                               <  SRR4302540.7270962/94‑1 (MQ=60)

                               GGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACGGCTGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCC                                                              >  SRR4302540.6843174/1‑94 (MQ=60)

                               GGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGCAGCCGGTTTATGCCGTTGGCGAGAACTACAGCC                                                              >  SRR4302540.9801102/1‑94 (MQ=60)

                               GGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCC                                                              >  SRR4302540.6394673/1‑94 (MQ=60)

                               GGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCC                                                              >  SRR4302540.6843176/1‑94 (MQ=60)

                               GGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGCTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGCACTACAGCC                                                              >  SRR4302540.828600/1‑94 (MQ=60)

                                 CGACCAACCGTCTATGCAGTACATCGGGAAAGCTCTGAAAGAGTTTCGTGACAGCGGTAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAG                                                            >  SRR4302540.9379496/1‑94 (MQ=60)

                                 CGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAG                                                            <  SRR4302540.10003757/94‑1 (MQ=60)

                                 CGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAG                                                            <  SRR4302540.6417167/94‑1 (MQ=60)

                                 CGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAG                                                            >  SRR4302540.4437617/1‑94 (MQ=60)

                                 CGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAG                                                            >  SRR4302540.7551562/1‑94 (MQ=60)

                                 CGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAG                                                            <  SRR4302540.2345855/94‑1 (MQ=60)

                                  GACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGTGAACTACAGCCAGG                                                           >  SRR4302540.2751796/1‑94 (MQ=60)

                                  GACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGG                                                           <  SRR4302540.4128262/94‑1 (MQ=60)

                                  GACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGG                                                           >  SRR4302540.4781953/1‑94 (MQ=60)

                                  GACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGG                                                           <  SRR4302540.4755586/94‑1 (MQ=60)

                                  GACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGG                                                           <  SRR4302540.5789661/94‑1 (MQ=60)

                                  GACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGG                                                           <  SRR4302540.3558937/94‑1 (MQ=60)

                                  GACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGG                                                           <  SRR4302540.3558938/94‑1 (MQ=60)

                                  GACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGATTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGG                                                           >  SRR4302540.8950199/1‑94 (MQ=60)

                                   ACCAACCGTCTATGCAGTACATCGTCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGG                                                          <  SRR4302540.3243959/94‑1 (MQ=60)

                                   ACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGG                                                          <  SRR4302540.8600285/94‑1 (MQ=60)

                                     CAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGC                                                        <  SRR4302540.1126215/94‑1 (MQ=60)

                                     CAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGC                                                        <  SRR4302540.1126214/94‑1 (MQ=60)

                                      AACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCA                                                       <  SRR4302540.7755923/94‑1 (MQ=60)

                                        CCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAAT                                                     <  SRR4302540.5170634/94‑1 (MQ=60)

                                        CCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAAT                                                     >  SRR4302540.8881033/1‑94 (MQ=60)

                                         CGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATA                                                    <  SRR4302540.887887/94‑1 (MQ=60)

                                         CGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATA                                                    >  SRR4302540.8734595/1‑94 (MQ=60)

                                          GTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATAT                                                   <  SRR4302540.1920615/94‑1 (MQ=60)

                                          GTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATAT                                                   >  SRR4302540.1165219/1‑94 (MQ=60)

                                          GTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATAT                                                   >  SRR4302540.2971516/1‑94 (MQ=60)

                                          GTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATAT                                                   >  SRR4302540.6188417/1‑94 (MQ=60)

                                           TCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATT                                                  <  SRR4302540.3883095/94‑1 (MQ=60)

                                             TATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTAT                                                >  SRR4302540.9814674/1‑94 (MQ=60)

                                              ATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATC                                               <  SRR4302540.911914/94‑1 (MQ=60)

                                               TGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCT                                              <  SRR4302540.6820702/94‑1 (MQ=60)

                                               TGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCT                                              >  SRR4302540.10090914/1‑94 (MQ=60)

                                               TGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCT                                              <  SRR4302540.3029582/94‑1 (MQ=60)

                                               TGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCT                                              <  SRR4302540.4747048/94‑1 (MQ=60)

                                               TGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCT                                              <  SRR4302540.2663032/94‑1 (MQ=60)

                                                GCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGACAGGGGCAATATTATCTC                                             <  SRR4302540.8410201/94‑1 (MQ=60)

                                                 CAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCG                                            <  SRR4302540.1993939/94‑1 (MQ=60)

                                                  AGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGC                                           >  SRR4302540.7480137/1‑94 (MQ=60)

                                                   GTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCC                                          >  SRR4302540.3939876/1‑94 (MQ=60)

                                                   GTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTCGCGAGAACTACAGCCAGGGGCAATATTATCTCGCC                                          >  SRR4302540.3939875/1‑94 (MQ=60)

                                                    TACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCA                                         <  SRR4302540.4622764/94‑1 (MQ=60)

                                                     ACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAG                                        >  SRR4302540.8307942/1‑94 (MQ=60)

                                                     ACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAG                                        >  SRR4302540.9613937/1‑94 (MQ=60)

                                                      CATCGGCAAAGCTCTGAAAGAGTTTCGTGACGGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGT                                       >  SRR4302540.8302352/1‑94 (MQ=60)

                                                      CATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGT                                       >  SRR4302540.715942/1‑94 (MQ=60)

                                                      CATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGT                                       <  SRR4302540.4274406/94‑1 (MQ=60)

                                                      CATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGT                                       <  SRR4302540.7644391/94‑1 (MQ=60)

                                                      CATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGT                                       >  SRR4302540.7686845/1‑94 (MQ=60)

                                                      CATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGT                                       >  SRR4302540.8302095/1‑94 (MQ=60)

                                                      CATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGT                                       >  SRR4302540.8302351/1‑94 (MQ=60)

                                                       ATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTT                                      >  SRR4302540.6580474/1‑94 (MQ=60)

                                                       ATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTT                                      >  SRR4302540.9574251/1‑94 (MQ=60)

                                                        TCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTT                                     <  SRR4302540.4210296/94‑1 (MQ=60)

                                                         CGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTC                                    >  SRR4302540.8396903/1‑94 (MQ=60)

                                                         CGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTC                                    >  SRR4302540.3945532/1‑94 (MQ=60)

                                                           GCAAAGCTCTGAAGGAGTTTCGTGACAGCGGGACGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGC                                  <  SRR4302540.9067762/94‑1 (MQ=60)

                                                           GCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGC                                  >  SRR4302540.8679203/1‑94 (MQ=60)

                                                            CAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCC                                 >  SRR4302540.1281049/1‑94 (MQ=60)

                                                             AAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCA                                >  SRR4302540.6052751/1‑94 (MQ=60)

                                                             AAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCA                                >  SRR4302540.6052752/1‑94 (MQ=60)

                                                             AAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCA                                <  SRR4302540.6274239/94‑1 (MQ=60)

                                                              AAGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAA                               >  SRR4302540.8102084/1‑94 (MQ=60)

                                                               AGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAAT                              <  SRR4302540.1095207/94‑1 (MQ=60)

                                                               AGCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAAT                              <  SRR4302540.3473957/94‑1 (MQ=60)

                                                                GCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATA                             <  SRR4302540.3011371/94‑1 (MQ=60)

                                                                GCTCTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATA                             <  SRR4302540.804708/94‑1 (MQ=60)

                                                                   CTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAA                          >  SRR4302540.9547800/1‑94 (MQ=60)

                                                                   CTGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAA                          >  SRR4302540.3780723/1‑94 (MQ=60)

                                                                    TGAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAAT                         >  SRR4302540.3376793/1‑94 (MQ=60)

                                                                     GAAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATT                        >  SRR4302540.1584371/1‑94 (MQ=60)

                                                                      AAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTT                       <  SRR4302540.9320615/94‑1 (MQ=60)

                                                                      AAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTT                       >  SRR4302540.9997256/1‑94 (MQ=60)

                                                                      AAAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTT                       >  SRR4302540.4383306/1‑94 (MQ=60)

                                                                       AAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTG                      >  SRR4302540.3350218/1‑94 (MQ=60)

                                                                       AAGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTG                      >  SRR4302540.2098300/1‑94 (MQ=60)

                                                                        AGAGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGG                     <  SRR4302540.6035675/94‑1 (MQ=60)

                                                                          AGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCT                   >  SRR4302540.6831343/1‑94 (MQ=60)

                                                                          AGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCT                   >  SRR4302540.2659709/1‑94 (MQ=60)

                                                                          AGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCT                   <  SRR4302540.1346074/94‑1 (MQ=60)

                                                                          AGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCT                   <  SRR4302540.201249/94‑1 (MQ=60)

                                                                          AGTTTCGTGACAGCGGGAAGCCGGTTTATGCCGCTGGCGAGAAATAAAGCCAGGGGCAATATTAccaccccagtttggccaacaactgtgggct                   >  SRR4302540.2659708/1‑64 (MQ=60)

                                                                          AGTGTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCT                   <  SRR4302540.201250/94‑1 (MQ=60)

                                                                           GTTTCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTG                  <  SRR4302540.258477/94‑1 (MQ=60)

                                                                             TTCGTGACAGCGGGAAGCCGGCTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTC                >  SRR4302540.9143802/1‑94 (MQ=60)

                                                                              TCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCT               <  SRR4302540.5703465/94‑1 (MQ=60)

                                                                              TCGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCT               <  SRR4302540.2406886/94‑1 (MQ=60)

                                                                               CGTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTC              <  SRR4302540.6680319/94‑1 (MQ=60)

                                                                               CGTGACAGCGGGAAGCCGGTTTATGCCGTAGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTC              <  SRR4302540.6095059/94‑1 (MQ=60)

                                                                                GTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATTAAATTTGGCTGTCTCC             >  SRR4302540.9030273/1‑94 (MQ=60)

                                                                                GTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCC             <  SRR4302540.9400248/94‑1 (MQ=60)

                                                                                GTGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCC             >  SRR4302540.4633351/1‑94 (MQ=60)

                                                                                 TGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCG            <  SRR4302540.1850171/94‑1 (MQ=60)

                                                                                 TGACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCG            <  SRR4302540.663454/94‑1 (MQ=60)

                                                                                  GACAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGC           >  SRR4302540.6204799/1‑94 (MQ=60)

                                                                                    CAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAA         >  SRR4302540.7430516/1‑94 (MQ=60)

                                                                                    CAGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAA         <  SRR4302540.6473514/94‑1 (MQ=60)

                                                                                     AGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAG        >  SRR4302540.2233464/1‑94 (MQ=60)

                                                                                     AGCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAG        <  SRR4302540.3768473/94‑1 (MQ=60)

                                                                                      GCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGG       <  SRR4302540.8902636/94‑1 (MQ=60)

                                                                                      GCGGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGG       <  SRR4302540.9160112/94‑1 (MQ=60)

                                                                                        GGGAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCG     >  SRR4302540.6201486/1‑94 (MQ=60)

                                                                                          GAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTG   <  SRR4302540.4386910/94‑1 (MQ=60)

                                                                                          GAAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTG   <  SRR4302540.3320085/94‑1 (MQ=60)

                                                                                           AAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGG  <  SRR4302540.7148695/94‑1 (MQ=60)

                                                                                           AAGCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGG  <  SRR4302540.9900375/94‑1 (MQ=60)

TATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGG  >  NC_000913/1847205‑1847389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`