Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,923,118	T→C	intergenic (‑125/‑14)	b1841 ← / → holE	hypothetical protein/DNA polymerase III theta subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,923,118	0	T	C	100.0%	1035.0 / NA	314	intergenic (‑125/‑14)	b1841/holE	hypothetical protein/DNA polymerase III theta subunit
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (140/174); total (140/174)

Only 100 of 337 total aligned reads displayed.

GAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGG  >  NC_000913/1923028‑1923207

gagCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGTCACACTCTTAGTAACTTTTGCTCTCGAAagacga                                                                                         >  2:9253028/1‑93 (MQ=255)

gagCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAAtgacga                                                                                         <  1:897461/93‑1 (MQ=255)

  gCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACgagg                                                                                       >  1:9122564/1‑93 (MQ=255)

    aTAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACgaggag                                                                                     >  2:4723377/1‑93 (MQ=255)

     tAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGgaga                                                                                    <  1:6059382/93‑1 (MQ=255)

     tAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGgaga                                                                                    >  2:6281717/1‑93 (MQ=255)

     tAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGgaga                                                                                    >  1:1901537/1‑93 (MQ=255)

      aaCCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGAt                                                                                   <  2:5332788/93‑1 (MQ=255)

         cTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTaa                                                                                >  2:9205605/1‑93 (MQ=255)

           tGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGa                                                                              >  2:6651885/1‑93 (MQ=255)

           tGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGa                                                                              >  2:3110243/1‑93 (MQ=255)

            gTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGaa                                                                             <  1:4616295/93‑1 (MQ=255)

             tCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAAt                                                                            <  1:9933498/93‑1 (MQ=255)

             tCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAAt                                                                            >  2:5039439/1‑93 (MQ=255)

               tAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGc                                                                          >  1:5776/1‑93 (MQ=255)

                aaTGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCt                                                                         >  2:5913055/1‑93 (MQ=255)

                  tGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTga                                                                       >  1:3420759/1‑93 (MQ=255)

                  tGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTga                                                                       >  1:9443141/1‑93 (MQ=255)

                   gTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTgaa                                                                      >  2:2489340/1‑93 (MQ=255)

                   gTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTgaa                                                                      >  2:1044862/1‑93 (MQ=255)

                   gTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTgaa                                                                      >  1:8251338/1‑93 (MQ=255)

                   gTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTgaa                                                                      <  1:7542372/93‑1 (MQ=255)

                    tCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTgaag                                                                     <  2:5694266/93‑1 (MQ=255)

                    tCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTgaag                                                                     >  2:9082598/1‑93 (MQ=255)

                     cTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTgaaga                                                                    <  1:9617131/93‑1 (MQ=255)

                        aGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATc                                                                 <  2:291092/93‑1 (MQ=255)

                         gTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCt                                                                <  2:7795743/93‑1 (MQ=255)

                          tCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTg                                                               >  2:343384/1‑93 (MQ=255)

                          tCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTg                                                               >  1:8144741/1‑93 (MQ=255)

                           cGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTgg                                                              <  2:4005088/93‑1 (MQ=255)

                           cGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTgg                                                              <  1:7070133/93‑1 (MQ=255)

                            gAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGc                                                             >  2:9540906/1‑93 (MQ=255)

                            gAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGc                                                             >  1:1129194/1‑93 (MQ=255)

                            gAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGc                                                             <  1:2115207/93‑1 (MQ=255)

                             aGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCt                                                            >  1:3322638/1‑93 (MQ=255)

                             aGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCt                                                            >  1:7158053/1‑93 (MQ=255)

                              ggATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTa                                                           <  1:159977/93‑1 (MQ=255)

                                atcatcAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTaaa                                                         <  1:3888131/93‑1 (MQ=255)

                                 tcatcaATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAAc                                                        <  2:1556220/93‑1 (MQ=255)

                                 tcatcaATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAAc                                                        <  2:1955225/93‑1 (MQ=255)

                                 tcatcaATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAAc                                                        <  2:2235698/93‑1 (MQ=255)

                                  catcaATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTACACt                                                       >  2:1889160/1‑93 (MQ=255)

                                   atcaATTCCGTCTTGCCATCCTGGCTCACTCTTAGTAACTTGTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTg                                                      <  1:8654047/93‑1 (MQ=255)

                                   atcaATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTg                                                      >  2:1158335/1‑93 (MQ=255)

                                    tcaATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTgg                                                     <  2:902910/93‑1 (MQ=255)

                                     caATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGa                                                    <  1:1744610/93‑1 (MQ=255)

                                      aaTTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGAt                                                   >  2:1670732/1‑93 (MQ=255)

                                      aaTTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGAt                                                   <  1:4758413/93‑1 (MQ=255)

                                         tCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGTTTAAGAATGCTGAAGAATCTGGCTAATCTGGATCaa                                                >  2:2318201/1‑93 (MQ=255)

                                         tCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCaa                                                <  1:7385965/93‑1 (MQ=255)

                                          ccGGCTTGCCATCCTGGCTCACTATTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCaaa                                               <  1:6215001/93‑1 (MQ=255)

                                               ttGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGaa                                          >  2:7225475/1‑93 (MQ=255)

                                               ttGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGaa                                          <  1:5591187/93‑1 (MQ=255)

                                                tGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGaaa                                         <  1:7303115/93‑1 (MQ=255)

                                                tGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGaaa                                         <  2:4214833/93‑1 (MQ=255)

                                                 gCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAAt                                        >  2:511133/1‑93 (MQ=255)

                                                  ccATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATg                                       <  1:2705519/93‑1 (MQ=255)

                                                   cATCCTGGCTCACTGTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATgg                                      <  2:840355/93‑1 (MQ=255)

                                                    aTCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGa                                     <  1:4879468/93‑1 (MQ=255)

                                                    aTCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGa                                     <  1:1647274/93‑1 (MQ=255)

                                                     tCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGAt                                    <  1:1981898/93‑1 (MQ=255)

                                                      ccTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATa                                   >  2:8178251/1‑93 (MQ=255)

                                                        tGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGCATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATaaa                                 >  1:4745545/1‑93 (MQ=255)

                                                        tGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATaaa                                 <  1:1200524/93‑1 (MQ=255)

                                                        tGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATaaa                                 <  1:7947798/93‑1 (MQ=255)

                                                          gCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGt                               <  2:7549056/93‑1 (MQ=255)

                                                          gCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGt                               >  1:544610/1‑93 (MQ=255)

                                                          gCTCACTCTTAGTAACTATTGCCCGAGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGt                               <  2:6900051/93‑1 (MQ=255)

                                                            tCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGa                             <  1:5947796/93‑1 (MQ=255)

                                                             cACTCTTAGTAACTTTTGCTCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGaa                            >  1:308799/1‑93 (MQ=255)

                                                             cACTCTTAGTAACTTTTGCCCGCGAATTACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGaa                            <  1:3561991/93‑1 (MQ=255)

                                                             cACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGaa                            <  2:318813/93‑1 (MQ=255)

                                                             cACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGaa                            <  1:9768272/93‑1 (MQ=255)

                                                             cACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGaa                            >  1:5169602/1‑93 (MQ=255)

                                                              aCTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAAt                           <  1:6962164/93‑1 (MQ=255)

                                                              aCTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAAt                           <  2:8811492/93‑1 (MQ=255)

                                                              aCTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAAt                           >  1:2498435/1‑93 (MQ=255)

                                                               ctctTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATg                          <  2:8255468/93‑1 (MQ=255)

                                                                 ctTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTc                        >  1:4269494/1‑93 (MQ=255)

                                                                   tAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGa                      >  2:8548095/1‑93 (MQ=255)

                                                                     gTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGAtt                    >  2:6471223/1‑93 (MQ=255)

                                                                      tAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGAttt                   <  1:5563197/93‑1 (MQ=255)

                                                                       aaCTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTg                  <  1:5677054/93‑1 (MQ=255)

                                                                        aCTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTgg                 >  1:7747517/1‑93 (MQ=255)

                                                                         cTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTggc                <  2:2999240/93‑1 (MQ=255)

                                                                         cTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTggc                <  1:2414732/93‑1 (MQ=255)

                                                                         cTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTggc                <  1:9329823/93‑1 (MQ=255)

                                                                            ttGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTggcggc             <  1:502328/93‑1 (MQ=255)

                                                                            ttGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTggcggc             >  2:9409967/1‑93 (MQ=255)

                                                                               cccGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTggcggcggc          <  1:8773903/93‑1 (MQ=255)

                                                                               cccGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTggcggcggc          <  2:1511934/93‑1 (MQ=255)

                                                                               cacgcgAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAATTGAATGTCGATTTggcggcggc          <  2:651001/91‑1 (MQ=255)

                                                                                 cgcgAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCg        >  2:2861158/1‑93 (MQ=255)

                                                                                  gcgAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCgg       <  2:6716430/93‑1 (MQ=255)

                                                                                   cgAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCggg      <  2:7009952/93‑1 (MQ=255)

                                                                                   cgAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCggg      >  2:442194/1‑93 (MQ=255)

                                                                                    gAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCgggg     <  1:10020666/93‑1 (MQ=255)

                                                                                      atgacgAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTg   >  1:6688374/1‑93 (MQ=255)

                                                                                       tgacgaGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTgg  >  2:5630857/1‑93 (MQ=255)

                                                                                       tgacgaGGAGATTAAGAATGCTGAAGAATCAGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTgg  <  1:4411744/93‑1 (MQ=255)

GAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGG  >  NC_000913/1923028‑1923207

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ACAGAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATT  >  NC_000913/1923025‑1923211

ACAGAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAGCTTTTGCCCGCGAATGAC                                                                                               <  SRR4302540.1094136/94‑1 (MQ=60)

ACAGAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGAC                                                                                               <  SRR4302540.10090128/94‑1 (MQ=60)

ACAGAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGAC                                                                                               >  SRR4302540.3092828/1‑94 (MQ=60)

ACAGAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGAC                                                                                               <  SRR4302540.9778294/94‑1 (MQ=60)

 CAGAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACG                                                                                              <  SRR4302540.9240873/94‑1 (MQ=60)

 CAGAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACG                                                                                              >  SRR4302540.7042469/1‑94 (MQ=60)

 CAGAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACG                                                                                              >  SRR4302540.9528986/1‑94 (MQ=60)

  AGAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGA                                                                                             >  SRR4302540.8977913/1‑94 (MQ=60)

   GAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAG                                                                                            <  SRR4302540.7211681/94‑1 (MQ=60)

   GAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAG                                                                                            <  SRR4302540.907015/94‑1 (MQ=60)

   GAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAG                                                                                            >  SRR4302540.7194904/1‑94 (MQ=60)

    AGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGG                                                                                           >  SRR4302540.9232220/1‑94 (MQ=60)

     GCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGG                                                                                          >  SRR4302540.7847424/1‑94 (MQ=60)

     GCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGA                                                                                          <  SRR4302540.7250940/94‑1 (MQ=60)

      CATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAG                                                                                         <  SRR4302540.6740213/94‑1 (MQ=60)

      CATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAG                                                                                         <  SRR4302540.9451729/94‑1 (MQ=60)

      CATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAG                                                                                         >  SRR4302540.343877/1‑94 (MQ=60)

       ATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGT                                                                                        >  SRR4302540.7153314/1‑94 (MQ=60)

       ATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGA                                                                                        >  SRR4302540.1922329/1‑94 (MQ=60)

       ATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGA                                                                                        >  SRR4302540.1547623/1‑94 (MQ=60)

        TAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGAT                                                                                       <  SRR4302540.6126727/94‑1 (MQ=60)

        TAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCCTAGTAACTTTTGACCGCGAATGACGAGGCGAT                                                                                       >  SRR4302540.10048846/1‑94 (MQ=60)

         AACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATT                                                                                      <  SRR4302540.8395448/94‑1 (MQ=60)

         AACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATT                                                                                      <  SRR4302540.9552876/94‑1 (MQ=60)

         AACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATT                                                                                      >  SRR4302540.5733946/1‑94 (MQ=60)

         AACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATT                                                                                      >  SRR4302540.245824/1‑94 (MQ=60)

          ACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTA                                                                                     <  SRR4302540.8423447/94‑1 (MQ=60)

            CTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAG                                                                                   <  SRR4302540.2557345/94‑1 (MQ=60)

              TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAA                                                                                 <  SRR4302540.3539350/94‑1 (MQ=60)

              TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAA                                                                                 >  SRR4302540.4459578/1‑94 (MQ=60)

               GTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAAT                                                                                <  SRR4302540.671338/94‑1 (MQ=60)

               GTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAAT                                                                                >  SRR4302540.4373846/1‑94 (MQ=60)

               GTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAAT                                                                                <  SRR4302540.4665807/94‑1 (MQ=60)

                TCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATG                                                                               <  SRR4302540.10049425/94‑1 (MQ=60)

                TCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATG                                                                               >  SRR4302540.8993776/1‑94 (MQ=60)

                TCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATG                                                                               <  SRR4302540.1930384/94‑1 (MQ=60)

                 CTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGC                                                                              >  SRR4302540.5842/1‑94 (MQ=60)

                   AATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTG                                                                            >  SRR4302540.8323129/1‑94 (MQ=60)

                   AATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTG                                                                            <  SRR4302540.2111581/94‑1 (MQ=60)

                    ATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGA                                                                           >  SRR4302540.3457964/1‑94 (MQ=60)

                    ATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGA                                                                           >  SRR4302540.9555259/1‑94 (MQ=60)

                     TGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAA                                                                          >  SRR4302540.8347248/1‑94 (MQ=60)

                     TGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAA                                                                          <  SRR4302540.8169625/94‑1 (MQ=60)

                      GTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAG                                                                         <  SRR4302540.742366/94‑1 (MQ=60)

                      GTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAG                                                                         <  SRR4302540.7626876/94‑1 (MQ=60)

                        CTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAA                                                                       <  SRR4302540.9730508/94‑1 (MQ=60)

                        CTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAA                                                                       <  SRR4302540.191158/94‑1 (MQ=60)

                         TGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAAT                                                                      >  SRR4302540.4759577/1‑94 (MQ=60)

                          GAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATC                                                                     <  SRR4302540.5557988/94‑1 (MQ=60)

                          GAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAAAC                                                                     >  SRR4302540.331011/1‑94 (MQ=60)

                           AGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCT                                                                    >  SRR4302540.5331314/1‑94 (MQ=60)

                           AGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCT                                                                    >  SRR4302540.9575919/1‑94 (MQ=60)

                            GTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTG                                                                   >  SRR4302540.8239288/1‑94 (MQ=60)

                             TCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGG                                                                  <  SRR4302540.6997601/94‑1 (MQ=60)

                             TCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGG                                                                  <  SRR4302540.10104959/94‑1 (MQ=60)

                             TCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGG                                                                  >  SRR4302540.1150670/1‑94 (MQ=60)

                             TCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGG                                                                  <  SRR4302540.9519945/94‑1 (MQ=60)

                              CGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGC                                                                 <  SRR4302540.7148775/94‑1 (MQ=60)

                              CGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGC                                                                 >  SRR4302540.1140944/1‑94 (MQ=60)

                              CGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCCCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGC                                                                 >  SRR4302540.7401329/1‑94 (MQ=60)

                               GAGGATCATCGATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCA                                                                >  SRR4302540.3359089/1‑94 (MQ=60)

                               GAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCT                                                                <  SRR4302540.2137908/94‑1 (MQ=60)

                               GAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCT                                                                >  SRR4302540.7237836/1‑94 (MQ=60)

                               GAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCT                                                                >  SRR4302540.3359090/1‑94 (MQ=60)

                                AGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTA                                                               >  SRR4302540.259508/1‑94 (MQ=60)

                                 GGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAA                                                              <  SRR4302540.161589/94‑1 (MQ=60)

                                 GGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAA                                                              >  SRR4302540.5631624/1‑94 (MQ=60)

                                  GATCGTCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAA                                                             >  SRR4302540.2090608/1‑94 (MQ=60)

                                   ATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAAC                                                            <  SRR4302540.3930355/94‑1 (MQ=60)

                                    TCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACT                                                           <  SRR4302540.5311106/94‑1 (MQ=60)

                                     CATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTG                                                          >  SRR4302540.2715200/1‑94 (MQ=60)

                                      ATCAATTCCGTCTTGCCATCCTGGCTCACTCTTAGTAACTTGTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGG                                                         <  SRR4302540.8754576/94‑1 (MQ=60)

                                      ATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGG                                                         >  SRR4302540.1883193/1‑94 (MQ=60)

                                       TCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGA                                                        <  SRR4302540.1661616/94‑1 (MQ=60)

                                        CAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGAT                                                       <  SRR4302540.6788840/94‑1 (MQ=60)

                                        CAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGAT                                                       >  SRR4302540.5549477/1‑94 (MQ=60)

                                        CAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGAT                                                       <  SRR4302540.1763491/94‑1 (MQ=60)

                                        CAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCCGGCTAAACTGGAT                                                       <  SRR4302540.1763490/94‑1 (MQ=60)

                                         AATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGTGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATC                                                      <  SRR4302540.4809187/94‑1 (MQ=60)

                                         AATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATC                                                      <  SRR4302540.4809188/94‑1 (MQ=60)

                                            TCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAA                                                   <  SRR4302540.7468255/94‑1 (MQ=60)

                                            TCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAA                                                   <  SRR4302540.9146122/94‑1 (MQ=60)

                                            TCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAA                                                   >  SRR4302540.4629052/1‑94 (MQ=60)

                                             CCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAAC                                                  <  SRR4302540.5333665/94‑1 (MQ=60)

                                             CCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAAC                                                  >  SRR4302540.2453449/1‑94 (MQ=60)

                                             CCGGCTTGCCATCCTGGCTCACTATTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAAC                                                  <  SRR4302540.6284154/94‑1 (MQ=60)

                                               GGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAG                                                >  SRR4302540.8991783/1‑94 (MQ=60)

                                               GGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAG                                                <  SRR4302540.7442342/94‑1 (MQ=60)

                                               GGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAG                                                <  SRR4302540.345474/94‑1 (MQ=60)

                                               GGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCCGGCTAAACTGGATCAAACAG                                                <  SRR4302540.5743100/94‑1 (MQ=60)

                                                GCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGA                                               <  SRR4302540.4911086/94‑1 (MQ=60)

                                                  TTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAA                                             <  SRR4302540.5144070/94‑1 (MQ=60)

                                                  TTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAA                                             <  SRR4302540.5652709/94‑1 (MQ=60)

                                                   TGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAAT                                            >  SRR4302540.6526171/1‑94 (MQ=60)

                                                   TGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAAT                                            <  SRR4302540.7384634/94‑1 (MQ=60)

                                                    GCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATG                                           <  SRR4302540.2996094/94‑1 (MQ=60)

                                                    GCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATG                                           >  SRR4302540.8852692/1‑94 (MQ=60)

                                                     CCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGG                                          <  SRR4302540.1569958/94‑1 (MQ=60)

                                                     CCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGG                                          <  SRR4302540.2734701/94‑1 (MQ=60)

                                                      CATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGA                                         >  SRR4302540.8253938/1‑94 (MQ=60)

                                                      CATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGA                                         >  SRR4302540.5992843/1‑94 (MQ=60)

                                                      CATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGA                                         <  SRR4302540.5015406/94‑1 (MQ=60)

                                                       ATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCACACAGAAATGGAA                                        >  SRR4302540.819260/1‑94 (MQ=60)

                                                       ATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGAT                                        >  SRR4302540.4800499/1‑94 (MQ=60)

                                                       ATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGAT                                        <  SRR4302540.1665250/94‑1 (MQ=60)

                                                       ATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGAT                                        <  SRR4302540.1665249/94‑1 (MQ=60)

                                                       ATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGAT                                        <  SRR4302540.9570387/94‑1 (MQ=60)

                                                       ATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGAT                                        <  SRR4302540.4766395/94‑1 (MQ=60)

                                                       ATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGAT                                        <  SRR4302540.4931858/94‑1 (MQ=60)

                                                        TCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATA                                       <  SRR4302540.1160213/94‑1 (MQ=60)

                                                        TCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATA                                       <  SRR4302540.2003391/94‑1 (MQ=60)

                                                        TCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATA                                       <  SRR4302540.4908494/94‑1 (MQ=60)

                                                        TCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATA                                       >  SRR4302540.9321630/1‑94 (MQ=60)

                                                         CCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGTATCAAACAGAAATGGATAA                                      >  SRR4302540.5656988/1‑94 (MQ=60)

                                                         CCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAA                                      >  SRR4302540.7738410/1‑94 (MQ=60)

                                                         CCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAA                                      <  SRR4302540.3387914/94‑1 (MQ=60)

                                                         CCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAA                                      >  SRR4302540.6081597/1‑94 (MQ=60)

                                                         CCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAA                                      >  SRR4302540.6081596/1‑94 (MQ=60)

                                                         CCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAA                                      <  SRR4302540.3472570/94‑1 (MQ=60)

                                                          CTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGCATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAA                                     >  SRR4302540.4796188/1‑94 (MQ=60)

                                                          CTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAA                                     <  SRR4302540.220190/94‑1 (MQ=60)

                                                           TGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAG                                    <  SRR4302540.1212871/94‑1 (MQ=60)

                                                           TGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAG                                    <  SRR4302540.8040446/94‑1 (MQ=60)

                                                            GGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGT                                   <  SRR4302540.1491547/94‑1 (MQ=60)

                                                            GGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGT                                   <  SRR4302540.1961742/94‑1 (MQ=60)

                                                            GGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGT                                   >  SRR4302540.550536/1‑94 (MQ=60)

                                                             GCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTG                                  >  SRR4302540.5668477/1‑94 (MQ=60)

                                                             GCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTG                                  <  SRR4302540.3641294/94‑1 (MQ=60)

                                                             GCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTG                                  >  SRR4302540.5925685/1‑94 (MQ=60)

                                                              CTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGA                                 >  SRR4302540.2377588/1‑94 (MQ=60)

                                                              CTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGA                                 >  SRR4302540.8038185/1‑94 (MQ=60)

                                                               TCACTCTTAGTAACTTTTGCTCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAA                                >  SRR4302540.311860/1‑94 (MQ=60)

                                                               TCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAA                                >  SRR4302540.5225845/1‑94 (MQ=60)

                                                               TCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAA                                >  SRR4302540.5115879/1‑94 (MQ=60)

                                                               TCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAA                                <  SRR4302540.9342601/94‑1 (MQ=60)

                                                               TCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAA                                <  SRR4302540.6013557/94‑1 (MQ=60)

                                                                CACTCTTAGTAACTTTTGCCCGCGAATTACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAAT                               <  SRR4302540.3600903/94‑1 (MQ=60)

                                                                CACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAAT                               >  SRR4302540.2525378/1‑94 (MQ=60)

                                                                CACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAAT                               <  SRR4302540.7122239/94‑1 (MQ=60)

                                                                CACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAAT                               <  SRR4302540.9882815/94‑1 (MQ=60)

                                                                CACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAAT                               <  SRR4302540.713964/94‑1 (MQ=60)

                                                                CACTCTTAGGAACTTGTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAAT                               <  SRR4302540.9882816/94‑1 (MQ=60)

                                                                 ACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATG                              <  SRR4302540.7039597/94‑1 (MQ=60)

                                                                   TCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTC                            >  SRR4302540.5778173/1‑94 (MQ=60)

                                                                   TCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTC                            <  SRR4302540.5990644/94‑1 (MQ=60)

                                                                   TCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTC                            >  SRR4302540.4315932/1‑94 (MQ=60)

                                                                    CTTAGTAACTTTTGCCCGCGAGTGACGAGGGGATTGAGAGTGCTGAAGAAGCTGGCTAAACTGGATCAGACAGAAATGGATAAAGggactgtgg                           >  SRR4302540.7470036/1‑85 (MQ=60)

                                                                    CTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCG                           >  SRR4302540.7470037/1‑94 (MQ=60)

                                                                       AGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATT                        <  SRR4302540.4830301/94‑1 (MQ=60)

                                                                       AGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATT                        <  SRR4302540.7658112/94‑1 (MQ=60)

                                                                         TAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTG                      <  SRR4302540.1852521/94‑1 (MQ=60)

                                                                         TAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTG                      <  SRR4302540.5624457/94‑1 (MQ=60)

                                                                          AACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGG                     >  SRR4302540.7837977/1‑94 (MQ=60)

                                                                          AACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGG                     <  SRR4302540.5739564/94‑1 (MQ=60)

                                                                            CTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCG                   <  SRR4302540.9441074/94‑1 (MQ=60)

                                                                            CTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCG                   >  SRR4302540.1664915/1‑94 (MQ=60)

                                                                            CTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCG                   >  SRR4302540.2864047/1‑94 (MQ=60)

                                                                            CTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCG                   <  SRR4302540.2440758/94‑1 (MQ=60)

                                                                             TTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGG                  >  SRR4302540.7373089/1‑94 (MQ=60)

                                                                             TTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGG                  <  SRR4302540.6238000/94‑1 (MQ=60)

                                                                              TTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGC                 <  SRR4302540.4142551/94‑1 (MQ=60)

                                                                              TTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGC                 >  SRR4302540.8596547/1‑94 (MQ=60)

                                                                              TTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGC                 <  SRR4302540.4004165/94‑1 (MQ=60)

                                                                               TTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCG                <  SRR4302540.507715/94‑1 (MQ=60)

                                                                                 GCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGC              >  SRR4302540.7857607/1‑94 (MQ=60)

                                                                                 GCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGC              >  SRR4302540.4007510/1‑94 (MQ=60)

                                                                                  CCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCC             <  SRR4302540.8868088/94‑1 (MQ=60)

                                                                                  CCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCC             <  SRR4302540.8875549/94‑1 (MQ=60)

                                                                                  CCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCC             <  SRR4302540.4651425/94‑1 (MQ=60)

                                                                                    CGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGG           <  SRR4302540.9815848/94‑1 (MQ=60)

                                                                                    CGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGG           <  SRR4302540.9815849/94‑1 (MQ=60)

                                                                                    CGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGG           <  SRR4302540.5643924/94‑1 (MQ=60)

                                                                                     GCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGG          <  SRR4302540.4958081/94‑1 (MQ=60)

                                                                                       GAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGT        <  SRR4302540.10137450/94‑1 (MQ=60)

                                                                                       GAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGT        <  SRR4302540.10137286/94‑1 (MQ=60)

                                                                                       GAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGG        >  SRR4302540.9117292/1‑94 (MQ=60)

                                                                                        AATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTG       <  SRR4302540.1115379/94‑1 (MQ=60)

                                                                                        AATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTG       <  SRR4302540.9908024/94‑1 (MQ=60)

                                                                                        AATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTG       <  SRR4302540.3895177/94‑1 (MQ=60)

                                                                                        AATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTG       >  SRR4302540.6762222/1‑94 (MQ=60)

                                                                                        AATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTG       >  SRR4302540.2355169/1‑94 (MQ=60)

                                                                                        AACGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTG       <  SRR4302540.1115378/94‑1 (MQ=60)

                                                                                          TGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGC     <  SRR4302540.6134757/94‑1 (MQ=60)

                                                                                          TGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGC     <  SRR4302540.4459563/94‑1 (MQ=60)

                                                                                          TGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGC     >  SRR4302540.8757912/1‑94 (MQ=60)

                                                                                          TGACGAGGAGATTAAGAATGCTGAAGAATCAGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGC     <  SRR4302540.4459564/94‑1 (MQ=60)

                                                                                            ACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCAT   <  SRR4302540.8404677/94‑1 (MQ=60)

                                                                                            ACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCAT   <  SRR4302540.5447483/94‑1 (MQ=60)

                                                                                             CGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATT  >  SRR4302540.470842/1‑94 (MQ=60)

                                                                                             CGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATT  <  SRR4302540.3928006/94‑1 (MQ=60)

ACAGAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATT  >  NC_000913/1923025‑1923211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`