Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,949,344	G→A	Q174Q (CAG→CAA)	yecD →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,949,344	0	G	A	75.8%	1861.4 / inf	944	Q174Q (CAG→CAA)	yecD	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (108/120); new base A (357/358); total (466/478)
Fisher's exact test for biased strand distribution p-value = 5.43e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.09e-02

Only 100 of 1003 total aligned reads displayed.

ATCGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTA  >  NC_000913/1949252‑1949436

  cGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAgcaaca                                                                                            <  2:227630/93‑1 (MQ=255)

    gtgtTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAAcaca                                                                                          <  2:739349/93‑1 (MQ=255)

     tgtTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACaa                                                                                         >  1:6353888/1‑93 (MQ=255)

     tgtTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACaa                                                                                         >  1:279659/1‑93 (MQ=255)

      gtTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAAt                                                                                        <  1:2952511/93‑1 (MQ=255)

       ttGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATa                                                                                       <  1:195332/93‑1 (MQ=255)

       ttGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATa                                                                                       >  1:6185339/1‑93 (MQ=255)

        tGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATaa                                                                                      <  2:1607519/93‑1 (MQ=255)

        tGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATaa                                                                                      <  1:1423050/93‑1 (MQ=255)

         gAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAAc                                                                                     <  1:4974356/93‑1 (MQ=255)

           aTCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAg                                                                                   <  2:2115257/93‑1 (MQ=255)

           aTCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAg                                                                                   <  2:3353113/93‑1 (MQ=255)

           aTCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAg                                                                                   <  1:228093/93‑1 (MQ=255)

            tCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAgc                                                                                  >  2:238328/1‑92 (MQ=255)

             ccACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAgca                                                                                 <  2:7675097/93‑3 (MQ=255)

               aCCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCAtt                                                                               <  2:2633517/93‑2 (MQ=255)

               aCCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCAtt                                                                               <  2:3906909/93‑2 (MQ=255)

                ccgcccgcAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCAtta                                                                              >  1:2464848/1‑91 (MQ=255)

                    ccgcAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCa                                                                          >  1:3934494/1‑93 (MQ=255)

                    ccgcAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCa                                                                          >  1:4397901/1‑93 (MQ=255)

                      gcAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCata                                                                        <  2:4767100/93‑1 (MQ=255)

                          tGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATAATATCTa                                                                    >  2:9360483/1‑93 (MQ=255)

                           gCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCtcc                                                                   <  1:7469995/93‑3 (MQ=255)

                            ccTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTAcc                                                                  <  1:8247844/93‑1 (MQ=255)

                            ccTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTAcc                                                                  >  2:1349938/1‑93 (MQ=255)

                            ccTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTAcc                                                                  <  2:5476597/93‑1 (MQ=255)

                             cTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTAccc                                                                 >  2:5248556/1‑93 (MQ=255)

                              tGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCcg                                                                <  2:5609086/93‑1 (MQ=255)

                                ggAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCcgcg                                                              >  2:9011245/1‑93 (MQ=255)

                                   aCTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCAt                                                           >  1:8776070/1‑93 (MQ=255)

                                   aCTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCAt                                                           >  2:2515994/1‑93 (MQ=255)

                                   aCTTGGCTTTAACCT‑GTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATc                                                          <  1:4195805/93‑1 (MQ=255)

                                    cTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATc                                                          >  1:4731925/1‑93 (MQ=255)

                                    cTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATc                                                          <  2:455219/93‑1 (MQ=255)

                                    cTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATc                                                          >  2:6282607/1‑93 (MQ=255)

                                    cTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATc                                                          <  1:9475399/93‑1 (MQ=255)

                                     ttGGCTTTAATCTGGTGATCGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCg                                                         >  1:3168531/1‑93 (MQ=255)

                                      tGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGc                                                        <  1:8909825/93‑1 (MQ=255)

                                      tGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGc                                                        >  1:9576600/1‑93 (MQ=255)

                                      tGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGc                                                        >  2:7268222/1‑93 (MQ=255)

                                      tGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGc                                                        <  1:7918163/93‑1 (MQ=255)

                                       ggCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGcc                                                       >  2:3589653/1‑93 (MQ=255)

                                        gCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGccc                                                      >  1:9864521/1‑93 (MQ=255)

                                          tttAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCgt                                                    >  1:8689532/1‑93 (MQ=255)

                                           ttAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCgtg                                                   <  2:1220063/93‑1 (MQ=255)

                                           ttAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCgtg                                                   <  1:10003588/93‑1 (MQ=255)

                                           ttAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCgtg                                                   <  2:684114/93‑1 (MQ=255)

                                           ttAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCgtg                                                   >  1:5300136/1‑93 (MQ=255)

                                           ttAATCTGGGGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCgtg                                                   <  1:6849152/93‑1 (MQ=255)

                                            tAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCgtgt                                                  <  2:4316032/93‑1 (MQ=255)

                                                cTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGt                                              >  2:1873043/1‑93 (MQ=255)

                                                 tGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCTCCCGTGTGCGTa                                             <  1:1799034/93‑1 (MQ=255)

                                                  ggTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAg                                            <  2:6586382/93‑1 (MQ=255)

                                                  ggTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAg                                            >  2:6388033/1‑93 (MQ=255)

                                                  ggTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAg                                            >  1:6663969/1‑93 (MQ=255)

                                                  ggTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAg                                            <  2:5961131/93‑1 (MQ=255)

                                                     gATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGt                                         <  2:8258455/93‑1 (MQ=255)

                                                      aTTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTg                                        <  2:9807458/93‑1 (MQ=255)

                                                      aTTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTg                                        >  1:9312325/1‑93 (MQ=255)

                                                      aTTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCAGTGTGCGTAGCGTg                                        <  1:1727805/93‑1 (MQ=255)

                                                       ttGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTgg                                       >  2:1020161/1‑93 (MQ=255)

                                                         gCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGaa                                     >  1:5863040/1‑93 (MQ=255)

                                                         gCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGaa                                     <  2:8029043/93‑1 (MQ=255)

                                                         gCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGaa                                     <  1:8178985/93‑1 (MQ=255)

                                                           cGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAaga                                   <  1:5126485/93‑1 (MQ=255)

                                                             aaGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAgaga                                 >  2:8433147/1‑93 (MQ=255)

                                                             aaGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAgaga                                 >  2:3014422/1‑93 (MQ=255)

                                                              aGACGCCTGTCGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCTCGTGTGCGTAGCGTGGAAGAGAt                                >  2:7206579/1‑93 (MQ=255)

                                                               gACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATc                               >  1:728082/1‑93 (MQ=255)

                                                               gACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATc                               >  2:8721772/1‑93 (MQ=255)

                                                                aCGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATcc                              <  2:7113845/93‑1 (MQ=255)

                                                                aCGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATcc                              >  1:551922/1‑93 (MQ=255)

                                                                   ccTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCa                           >  2:2907223/1‑93 (MQ=255)

                                                                   ccTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCttc                           >  1:1549095/1‑91 (MQ=255)

                                                                   ccTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCttc                           <  1:4555264/93‑3 (MQ=255)

                                                                     tGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCttcac                         >  2:9167385/1‑89 (MQ=255)

                                                                     tGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCttcac                         >  2:3135623/1‑89 (MQ=255)

                                                                     tGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCttcac                         >  1:3694087/1‑89 (MQ=255)

                                                                     tGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCttcac                         >  1:3289745/1‑89 (MQ=255)

                                                                        aGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAAcgcg                      >  2:5757152/1‑93 (MQ=255)

                                                                         gTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGt                     >  1:7711696/1‑93 (MQ=255)

                                                                          tGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGtt                    >  1:7046824/1‑93 (MQ=255)

                                                                            ccgccAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTAt                  <  2:4146237/93‑1 (MQ=255)

                                                                             cgccAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATg                 >  2:1723808/1‑93 (MQ=255)

                                                                              gccAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGa                <  1:1135337/93‑1 (MQ=255)

                                                                              gccAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGa                >  1:6018555/1‑93 (MQ=255)

                                                                              cccAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGa                <  1:257221/92‑1 (MQ=255)

                                                                               ccAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGAt               >  1:8453117/1‑93 (MQ=255)

                                                                                  gcgcCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTa            >  1:8600066/1‑93 (MQ=255)

                                                                                  gcgcCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTa            >  1:1311490/1‑93 (MQ=255)

                                                                                    gcCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACa          <  1:2141956/93‑1 (MQ=255)

                                                                                    gcCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACa          <  2:6689481/93‑1 (MQ=255)

                                                                                    gcCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACa          <  2:9466422/93‑1 (MQ=255)

                                                                                      cGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATc        >  1:3522528/1‑93 (MQ=255)

                                                                                       gAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCg       >  2:5061514/1‑93 (MQ=255)

                                                                                       gAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCg       <  2:9597119/93‑1 (MQ=255)

                                                                                        agcagcACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCgg      <  1:9166170/93‑1 (MQ=255)

                                                                                         gcagcaCAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGt     <  2:7863409/93‑1 (MQ=255)

                                                                                         gcagcaCAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGt     >  1:5669842/1‑93 (MQ=255)

                                                                                         gcagcaCAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGt     <  2:4989305/93‑1 (MQ=255)

ATCGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTA  >  NC_000913/1949252‑1949436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 552 total aligned reads displayed.

TATCGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTAC  >  NC_000913/1949251‑1949437

  TCGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACA                                                                                             <  SRR4302540.7228966/94‑1 (MQ=60)

   CGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACAC                                                                                            <  SRR4302540.1067571/94‑1 (MQ=60)

    GGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACA                                                                                           >  SRR4302540.4911157/1‑94 (MQ=60)

    GGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACA                                                                                           <  SRR4302540.3683038/94‑1 (MQ=60)

     GTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAA                                                                                          >  SRR4302540.282406/1‑94 (MQ=60)

     GTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAA                                                                                          <  SRR4302540.252527/94‑1 (MQ=60)

      TGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAAT                                                                                         >  SRR4302540.5625340/1‑94 (MQ=60)

       GTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATA                                                                                        >  SRR4302540.9638348/1‑94 (MQ=60)

       GTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATA                                                                                        <  SRR4302540.4646272/94‑1 (MQ=60)

       GTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATA                                                                                        <  SRR4302540.2985016/94‑1 (MQ=60)

       GTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATA                                                                                        >  SRR4302540.805756/1‑94 (MQ=60)

       GTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATA                                                                                        <  SRR4302540.8873257/94‑1 (MQ=60)

        TTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAC                                                                                       >  SRR4302540.8330492/1‑94 (MQ=60)

        TTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAA                                                                                       <  SRR4302540.197271/94‑1 (MQ=60)

        TTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAA                                                                                       <  SRR4302540.180116/94‑1 (MQ=60)

         TGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAAC                                                                                      <  SRR4302540.8944633/94‑1 (MQ=60)

         TGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAAC                                                                                      <  SRR4302540.8505839/94‑1 (MQ=60)

         TGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAAC                                                                                      <  SRR4302540.7530974/94‑1 (MQ=60)

         TGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAAC                                                                                      <  SRR4302540.1438455/94‑1 (MQ=60)

         TGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAAC                                                                                      <  SRR4302540.2584937/94‑1 (MQ=60)

          GAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACA                                                                                     <  SRR4302540.8614679/94‑1 (MQ=60)

          GAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACA                                                                                     <  SRR4302540.5028187/94‑1 (MQ=60)

           AATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTTTAGTGCCGCCAGCGCCGAGCAACACAATAACAG                                                                                    <  SRR4302540.9573879/94‑1 (MQ=60)

            ATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGC                                                                                   >  SRR4302540.8818120/1‑94 (MQ=60)

             TCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCA                                                                                  <  SRR4302540.8998401/94‑1 (MQ=60)

                CCCGCCCGCAATGCCTGGGAACTTGGCTTTAATCGGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCA                                                                               <  SRR4302540.4396280/94‑1 (MQ=60)

                ACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGcatta                                                                               >  SRR4302540.2491379/1‑89 (MQ=60)

                 CCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAA                                                                              >  SRR4302540.3757143/1‑94 (MQ=60)

                  CGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGcattaat                                                                             >  SRR4302540.4565835/1‑87 (MQ=60)

                  CGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGcattaat                                                                             <  SRR4302540.5857482/94‑8 (MQ=60)

                   GCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACC                                                                            >  SRR4302540.6871795/1‑94 (MQ=60)

                   GCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGcattaatc                                                                            <  SRR4302540.3511683/94‑9 (MQ=60)

                    CCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCA                                                                           <  SRR4302540.8217697/94‑1 (MQ=60)

                    CCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGcattaatca                                                                           <  SRR4302540.317010/94‑10 (MQ=60)

                    CCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGcattaatca                                                                           >  SRR4302540.3977027/1‑85 (MQ=60)

                    CCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGcattaatca                                                                           <  SRR4302540.9296052/94‑10 (MQ=60)

                     CCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCAT                                                                          >  SRR4302540.7584264/1‑94 (MQ=60)

                     CCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGcattaatcat                                                                          <  SRR4302540.1123298/94‑11 (MQ=60)

                      CGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATA                                                                         <  SRR4302540.6372256/94‑1 (MQ=60)

                      CGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATA                                                                         >  SRR4302540.6423842/1‑94 (MQ=60)

                       GCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATAT                                                                        <  SRR4302540.40395/94‑1 (MQ=60)

                       GCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATAT                                                                        <  SRR4302540.6310622/94‑1 (MQ=60)

                       GCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATAT                                                                        >  SRR4302540.9384089/1‑94 (MQ=60)

                       GCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATAT                                                                        <  SRR4302540.6598325/94‑1 (MQ=60)

                        CAATGCCTGGGAGCTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATC                                                                       <  SRR4302540.6937586/94‑1 (MQ=60)

                        CAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATC                                                                       <  SRR4302540.2962397/94‑1 (MQ=60)

                        CAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATC                                                                       <  SRR4302540.8792373/94‑1 (MQ=60)

                          ATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTA                                                                     >  SRR4302540.7643380/1‑94 (MQ=60)

                          ATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTA                                                                     >  SRR4302540.6452063/1‑94 (MQ=60)

                           TGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTAC                                                                    <  SRR4302540.2057451/94‑1 (MQ=60)

                            TCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTCCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACC                                                                   <  SRR4302540.1733799/94‑1 (MQ=60)

                            GCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACC                                                                   <  SRR4302540.4976011/94‑1 (MQ=60)

                             CCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCC                                                                  <  SRR4302540.4192607/94‑1 (MQ=60)

                             CCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCC                                                                  <  SRR4302540.7289356/94‑1 (MQ=60)

                             CCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCC                                                                  <  SRR4302540.2202425/94‑1 (MQ=60)

                              CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCC                                                                 >  SRR4302540.10148794/1‑94 (MQ=60)

                              CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                 >  SRR4302540.5778937/1‑94 (MQ=60)

                              CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                 >  SRR4302540.6198359/1‑94 (MQ=60)

                              CTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCG                                                                 <  SRR4302540.9173737/94‑1 (MQ=60)

                               TGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGC                                                                >  SRR4302540.1422984/1‑94 (MQ=60)

                                 GGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGC                                                              >  SRR4302540.7400661/1‑94 (MQ=60)

                                 GGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGC                                                              >  SRR4302540.937887/1‑94 (MQ=60)

                                  GAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCA                                                             >  SRR4302540.10025161/1‑94 (MQ=60)

                                  GAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCA                                                             <  SRR4302540.1662281/94‑1 (MQ=60)

                                   AACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCAT                                                            >  SRR4302540.8279305/1‑94 (MQ=60)

                                   AACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCAT                                                            >  SRR4302540.967168/1‑94 (MQ=60)

                                   AACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCAT                                                            >  SRR4302540.2543990/1‑94 (MQ=60)

                                   AACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCAT                                                            >  SRR4302540.320147/1‑94 (MQ=60)

                                   AACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCACCAGCGCCGAGCAACACAATCACAGCATTAATCATATCTACCCGCGCAC                                                            >  SRR4302540.4600270/1‑94 (MQ=60)

                                    ACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATC                                                           <  SRR4302540.4770034/94‑1 (MQ=60)

                                    ACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATC                                                           <  SRR4302540.7423469/94‑1 (MQ=60)

                                    ACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATC                                                           >  SRR4302540.9501912/1‑94 (MQ=60)

                                    ACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATC                                                           >  SRR4302540.768544/1‑94 (MQ=60)

                                     CTTGGCTTTAATCTGGTGATTGCCGATGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCG                                                          <  SRR4302540.1602045/94‑1 (MQ=60)

                                     CTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCG                                                          <  SRR4302540.9587774/94‑1 (MQ=60)

                                     CTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCG                                                          >  SRR4302540.1249384/1‑94 (MQ=60)

                                      TTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGC                                                         >  SRR4302540.5886162/1‑94 (MQ=60)

                                       TGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCC                                                        <  SRR4302540.9012997/94‑1 (MQ=60)

                                       TGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCC                                                        >  SRR4302540.707374/1‑94 (MQ=60)

                                       TGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCC                                                        <  SRR4302540.8010465/94‑1 (MQ=60)

                                       TGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCC                                                        >  SRR4302540.6899336/1‑94 (MQ=60)

                                        GGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCCGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCC                                                       >  SRR4302540.2384654/1‑94 (MQ=60)

                                        GGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCC                                                       >  SRR4302540.6509650/1‑94 (MQ=60)

                                        GGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCC                                                       <  SRR4302540.1508156/94‑1 (MQ=60)

                                         GCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCG                                                      <  SRR4302540.1375255/94‑1 (MQ=60)

                                         GCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCG                                                      <  SRR4302540.2811838/94‑1 (MQ=60)

                                         GCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCG                                                      <  SRR4302540.3222905/94‑1 (MQ=60)

                                         GCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCG                                                      <  SRR4302540.2176038/94‑1 (MQ=60)

                                           TTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTG                                                    >  SRR4302540.3599313/1‑94 (MQ=60)

                                           TTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTG                                                    >  SRR4302540.5358127/1‑94 (MQ=60)

                                            TTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGT                                                   >  SRR4302540.3134734/1‑94 (MQ=60)

                                             TAATCTGATGATTGCCGAAGACGTCTGTAGTGCCGCCAGCGCCGATCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTG                                                  <  SRR4302540.2869826/94‑1 (MQ=60)

                                              AATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCTGTGTGC                                                 >  SRR4302540.9936458/1‑94 (MQ=60)

                                               ATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCG                                                <  SRR4302540.5086130/94‑1 (MQ=60)

                                               ATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCG                                                >  SRR4302540.3948904/1‑94 (MQ=60)

                                                 CTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTA                                              >  SRR4302540.4336364/1‑94 (MQ=60)

                                                 CTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTA                                              >  SRR4302540.5160104/1‑94 (MQ=60)

                                                  TGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCTCCCGTGTGCGTAG                                             <  SRR4302540.1818615/94‑1 (MQ=60)

                                                  TGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAG                                             <  SRR4302540.1894279/94‑1 (MQ=60)

                                                   GGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGC                                            <  SRR4302540.4712854/94‑1 (MQ=60)

                                                   GGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGC                                            <  SRR4302540.2469497/94‑1 (MQ=60)

                                                    GTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCG                                           <  SRR4302540.3205023/94‑1 (MQ=60)

                                                    GTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCG                                           <  SRR4302540.8158994/94‑1 (MQ=60)

                                                    GTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCG                                           >  SRR4302540.4121148/1‑94 (MQ=60)

                                                     TGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGG                                          >  SRR4302540.7783075/1‑94 (MQ=60)

                                                     GGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGT                                          <  SRR4302540.5704437/94‑1 (MQ=60)

                                                      GATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTG                                         <  SRR4302540.1229089/94‑1 (MQ=60)

                                                        TTGCCGAAGGCGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGA                                       <  SRR4302540.6145630/94‑1 (MQ=60)

                                                        TTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGA                                       <  SRR4302540.968023/94‑1 (MQ=60)

                                                         TGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAA                                      >  SRR4302540.5928147/1‑94 (MQ=60)

                                                         TGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAA                                      <  SRR4302540.5471948/94‑1 (MQ=60)

                                                          GCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAG                                     <  SRR4302540.2424223/94‑1 (MQ=60)

                                                          GCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAG                                     <  SRR4302540.1471517/94‑1 (MQ=60)

                                                          GCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAG                                     >  SRR4302540.4095058/1‑94 (MQ=60)

                                                           CCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGA                                    >  SRR4302540.3742127/1‑94 (MQ=60)

                                                           CCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGA                                    <  SRR4302540.2656691/94‑1 (MQ=60)

                                                            CGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAG                                   <  SRR4302540.5182007/94‑1 (MQ=60)

                                                            CGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAG                                   <  SRR4302540.3640738/94‑1 (MQ=60)

                                                            CGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAG                                   <  SRR4302540.2228686/94‑1 (MQ=60)

                                                            CGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAG                                   >  SRR4302540.7528476/1‑94 (MQ=60)

                                                             GAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGA                                  >  SRR4302540.8455114/1‑94 (MQ=60)

                                                              AAGACGCCTGTAGTGCCGCCAGCGCCGATCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGAT                                 <  SRR4302540.4320666/94‑1 (MQ=60)

                                                              AAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGAT                                 <  SRR4302540.5969907/94‑1 (MQ=60)

                                                              AAGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGAT                                 >  SRR4302540.8701438/1‑94 (MQ=60)

                                                               AGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATC                                <  SRR4302540.1747476/94‑1 (MQ=60)

                                                               AGACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATC                                >  SRR4302540.9714907/1‑94 (MQ=60)

                                                                GACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCC                               >  SRR4302540.557942/1‑94 (MQ=60)

                                                                GACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCC                               <  SRR4302540.5297408/94‑1 (MQ=60)

                                                                GACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCC                               <  SRR4302540.8399087/94‑1 (MQ=60)

                                                                 ACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCT                              >  SRR4302540.719375/1‑94 (MQ=60)

                                                                 ACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCT                              <  SRR4302540.8773399/94‑1 (MQ=60)

                                                                 ACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCT                              >  SRR4302540.2016241/1‑94 (MQ=60)

                                                                 ACGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCT                              <  SRR4302540.8732100/94‑1 (MQ=60)

                                                                  CGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTT                             <  SRR4302540.1825223/94‑1 (MQ=60)

                                                                  CGCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTT                             <  SRR4302540.3272067/94‑1 (MQ=60)

                                                                   GCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCA                            <  SRR4302540.10019444/94‑1 (MQ=60)

                                                                   GCCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtc                            >  SRR4302540.1566176/1‑92 (MQ=60)

                                                                    CCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtca                           <  SRR4302540.3310544/94‑4 (MQ=60)

                                                                    CCTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtca                           >  SRR4302540.9358313/1‑91 (MQ=60)

                                                                     ttattGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcac                          <  SRR4302540.10079449/89‑5 (MQ=60)

                                                                     CTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcac                          <  SRR4302540.5124053/94‑5 (MQ=60)

                                                                     CTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcac                          >  SRR4302540.3325728/1‑90 (MQ=60)

                                                                     CTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcac                          >  SRR4302540.4674278/1‑90 (MQ=60)

                                                                     CTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcac                          >  SRR4302540.446848/1‑90 (MQ=60)

                                                                     CTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcac                          >  SRR4302540.5670092/1‑90 (MQ=60)

                                                                     CTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTtcac                          <  SRR4302540.2081776/94‑5 (MQ=60)

                                                                     CTGTAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATCAATCATATCCACCCGCGCAGCGCCCGAGTGCGTAGCGatgaagagagccttcac                          >  SRR4302540.9067659/1‑77 (MQ=58)

                                                                       GTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGC                        >  SRR4302540.5256672/1‑94 (MQ=60)

                                                                        TAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCG                       >  SRR4302540.1346111/1‑94 (MQ=60)

                                                                        TAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCG                       >  SRR4302540.2245753/1‑94 (MQ=60)

                                                                          GTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTT                     >  SRR4302540.8667010/1‑94 (MQ=60)

                                                                          GTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTT                     >  SRR4302540.5377515/1‑94 (MQ=60)

                                                                          GTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTAACCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTT                     >  SRR4302540.9796875/1‑94 (MQ=60)

                                                                           TGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTA                    >  SRR4302540.5515389/1‑94 (MQ=60)

                                                                            tccgccaaggaCGAGCAGCACAATAACAGTAGCAGCCATATCTGCCCGCGCATCGCGCGTGTGCGGAGCGTGGAAGAGATCCTCAACGCGTTAT                   <  SRR4302540.2993706/83‑1 (MQ=60)

                                                                            GCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTAT                   >  SRR4302540.8716827/1‑94 (MQ=60)

                                                                            GCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTAT                   <  SRR4302540.4806439/94‑1 (MQ=60)

                                                                             CCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCTTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATG                  <  SRR4302540.5749571/94‑1 (MQ=60)

                                                                             CCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATG                  >  SRR4302540.7050303/1‑94 (MQ=60)

                                                                              CGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGA                 >  SRR4302540.6085306/1‑94 (MQ=60)

                                                                              CGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGAATCGCCCGTGTGCGTAGCGTGTAAGAGATCCTTCACGCGGTATGA                 >  SRR4302540.6168859/1‑94 (MQ=57)

                                                                               GCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGAT                >  SRR4302540.5248858/1‑94 (MQ=60)

                                                                               GCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGAT                <  SRR4302540.1784466/94‑1 (MQ=60)

                                                                               GCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGAT                >  SRR4302540.8551258/1‑94 (MQ=60)

                                                                               GCCAGCGCCGAGCAACACAATAACAGCATGAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGAT                >  SRR4302540.956146/1‑94 (MQ=60)

                                                                               CCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGAT                <  SRR4302540.7815295/94‑1 (MQ=60)

                                                                               CCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGAT                <  SRR4302540.259713/94‑1 (MQ=60)

                                                                                CCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATT               >  SRR4302540.9239831/1‑94 (MQ=60)

                                                                                CCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATT               <  SRR4302540.2358127/94‑1 (MQ=60)

                                                                                   GCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTAC            <  SRR4302540.8281925/94‑1 (MQ=60)

                                                                                     GCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACAT          <  SRR4302540.8637356/94‑1 (MQ=60)

                                                                                     GCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACAT          >  SRR4302540.602517/1‑94 (MQ=60)

                                                                                     GCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACAT          <  SRR4302540.8847231/94‑1 (MQ=60)

                                                                                     GCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAT          >  SRR4302540.685521/1‑94 (MQ=60)

                                                                                     GCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAT          <  SRR4302540.7846131/94‑1 (MQ=60)

                                                                                      CCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATC         >  SRR4302540.8885157/1‑94 (MQ=60)

                                                                                      CCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATC         >  SRR4302540.3560925/1‑94 (MQ=60)

                                                                                       CGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCG        >  SRR4302540.7928438/1‑94 (MQ=60)

                                                                                       CGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCG        >  SRR4302540.3440582/1‑94 (MQ=60)

                                                                                       CGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCG        >  SRR4302540.4451962/1‑94 (MQ=60)

                                                                                       CGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCG        >  SRR4302540.10125954/1‑94 (MQ=60)

                                                                                       CGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCG        >  SRR4302540.116872/1‑94 (MQ=60)

                                                                                        GAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGG       >  SRR4302540.7355646/1‑94 (MQ=60)

                                                                                         AGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGT      >  SRR4302540.8300492/1‑94 (MQ=60)

                                                                                         AGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGT      <  SRR4302540.9276149/94‑1 (MQ=60)

                                                                                         AGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGT      >  SRR4302540.4246712/1‑94 (MQ=60)

                                                                                         AGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGT      >  SRR4302540.1454273/1‑94 (MQ=60)

                                                                                         AGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGT      >  SRR4302540.2897894/1‑94 (MQ=60)

                                                                                         AGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGT      <  SRR4302540.2787802/94‑1 (MQ=60)

                                                                                          GCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTC     <  SRR4302540.6763475/94‑1 (MQ=60)

                                                                                          GCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTC     <  SRR4302540.1942406/94‑1 (MQ=60)

                                                                                          GCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTC     <  SRR4302540.9652790/94‑1 (MQ=60)

                                                                                           CAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCT    >  SRR4302540.3825187/1‑94 (MQ=60)

                                                                                           CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT    <  SRR4302540.1194568/94‑1 (MQ=60)

                                                                                           CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT    >  SRR4302540.5947716/1‑94 (MQ=60)

                                                                                            AGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTA   >  SRR4302540.626927/1‑94 (MQ=60)

                                                                                            AACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTG   <  SRR4302540.7007746/94‑1 (MQ=60)

                                                                                            AACACAATAACAGCATTAATCATATCCCCCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTG   <  SRR4302540.6672008/94‑1 (MQ=60)

                                                                                             ACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGC  >  SRR4302540.7103375/1‑94 (MQ=60)

                                                                                             ACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATACTTCACGCGTTATGATTTACATCGGTCTGC  >  SRR4302540.1396466/1‑94 (MQ=60)

TATCGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTAC  >  NC_000913/1949251‑1949437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 5 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`