Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,975,051 G→A A38V (GCC→GTC)  motA ← MotA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,975,0510GA99.7% 1118.7 / ‑6.1 307A38V (GCC→GTC) motAMotA
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base A (164/142);  total (165/142)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 317 total aligned reads displayed.

GAGCGACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGGCAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAGAACAACC  >  NC_000913/1974961‑1975140
                                                                                          |                                                                                         
gAGCGACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACa                                                                                         >  2:2211357/1‑93 (MQ=255)
gAGCGACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACa                                                                                         <  2:1491442/93‑1 (MQ=255)
gAGCGACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACa                                                                                         >  1:5782137/1‑93 (MQ=255)
  gCGACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACaat                                                                                       >  2:4155556/1‑93 (MQ=255)
   cgacgaAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACaata                                                                                      <  1:9827739/93‑1 (MQ=255)
    gacgaAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACaataa                                                                                     >  1:8765228/1‑93 (MQ=255)
    gacgaAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACaataa                                                                                     <  2:3036694/93‑1 (MQ=255)
    gacgaAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACaataa                                                                                     <  1:5162517/93‑1 (MQ=255)
    gacgaAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACaataa                                                                                     <  2:6723760/93‑1 (MQ=255)
    gacgaAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACaataa                                                                                     >  2:3378229/1‑93 (MQ=255)
      cgaAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATc                                                                                   <  2:4652622/93‑1 (MQ=255)
       gaAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCa                                                                                  <  2:9286830/93‑1 (MQ=255)
        aaaCAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCAc                                                                                 >  2:5346522/1‑93 (MQ=255)
         aaCAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCAcc                                                                                <  2:5227899/93‑1 (MQ=255)
          aCAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCa                                                                               <  1:8076220/93‑1 (MQ=255)
            aGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGt                                                                             <  1:7149279/93‑1 (MQ=255)
            aGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGt                                                                             <  1:5389837/93‑1 (MQ=255)
            aGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGt                                                                             <  2:2816359/93‑1 (MQ=255)
            aGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGt                                                                             >  2:3258754/1‑93 (MQ=255)
            aGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGt                                                                             >  1:3291731/1‑93 (MQ=255)
            aGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGt                                                                             <  2:4047284/93‑1 (MQ=255)
             gCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGtt                                                                            >  1:403372/1‑93 (MQ=255)
             gCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGtt                                                                            >  2:6397628/1‑93 (MQ=255)
              cAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTc                                                                           <  1:5590912/93‑1 (MQ=255)
              cAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCCGCACCGACAATAATCACCAGTTc                                                                           <  1:2655307/93‑1 (MQ=255)
                aCGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAg                                                                         >  1:8848630/1‑93 (MQ=255)
                 cGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAGCGACCCAATCCCTGCACCGGCAATAATCAGCAGTTCAGc                                                                        >  1:9033697/1‑93 (MQ=255)
                   gCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCgg                                                                      >  1:1299188/1‑93 (MQ=255)
                     aGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGt                                                                    >  1:118742/1‑93 (MQ=255)
                     aGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGt                                                                    <  1:4916079/93‑1 (MQ=255)
                      gcgcCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGtt                                                                   >  2:9445452/1‑93 (MQ=255)
                      gcgcCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGtt                                                                   >  2:1712285/1‑93 (MQ=255)
                       cgcCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTg                                                                  <  1:7883035/93‑1 (MQ=255)
                       cgcCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTg                                                                  >  1:8536209/1‑93 (MQ=255)
                        gcCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGa                                                                 <  1:7977243/93‑1 (MQ=255)
                           ttCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATag                                                              >  1:2545044/1‑93 (MQ=255)
                           ttCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATag                                                              >  2:89134/1‑93 (MQ=255)
                           ttCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGGTGATag                                                              >  1:1647286/1‑93 (MQ=255)
                            tCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATaga                                                             <  2:4481609/93‑1 (MQ=255)
                            tCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATaga                                                             <  2:1292837/93‑1 (MQ=255)
                              aGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGt                                                           <  1:4508938/93‑1 (MQ=255)
                               gCGTGCCTTTAATCGCTTTCCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTg                                                          <  2:8682258/93‑1 (MQ=255)
                                cGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGc                                                         <  2:5532458/93‑1 (MQ=255)
                                  tGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTc                                                       >  1:6854574/1‑93 (MQ=255)
                                   gCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTcc                                                      >  1:4539210/1‑93 (MQ=255)
                                    ccTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCa                                                     >  2:2015651/1‑93 (MQ=255)
                                     cTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCaa                                                    <  2:8654248/93‑1 (MQ=255)
                                     cTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCaa                                                    <  1:7672425/93‑1 (MQ=255)
                                     cTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCaa                                                    <  2:8005410/93‑1 (MQ=255)
                                     cTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCaa                                                    <  1:1452278/93‑1 (MQ=255)
                                      tttAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAg                                                   >  2:8784067/1‑93 (MQ=255)
                                      tttAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAg                                                   <  1:2668404/93‑1 (MQ=255)
                                      tttAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAg                                                   >  2:7726294/1‑93 (MQ=255)
                                      tttAAGCGCTTGGCCATTAGTGCCCACGATAAACGGCCCAATCCCGGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAg                                                   <  2:2650669/93‑1 (MQ=255)
                                       ttAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAgg                                                  >  2:3763441/1‑93 (MQ=255)
                                          aTCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCtt                                               >  1:8195754/1‑93 (MQ=255)
                                          aTCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCtt                                               >  1:9311795/1‑93 (MQ=255)
                                              catggCCATTATTGCCGACGATAAACGCCCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCAc                                           <  2:4326983/89‑1 (MQ=255)
                                              cTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCAc                                           >  1:3759262/1‑93 (MQ=255)
                                              cTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCAc                                           >  1:10001959/1‑93 (MQ=255)
                                               tttGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCAcc                                          >  1:6498813/1‑93 (MQ=255)
                                                ttGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCg                                         <  1:1851797/93‑1 (MQ=255)
                                                 tGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCgg                                        >  1:5265344/1‑93 (MQ=255)
                                                 tGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCgg                                        >  1:9516045/1‑93 (MQ=255)
                                                  gCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGt                                       <  2:8484623/93‑1 (MQ=255)
                                                  gCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGt                                       <  1:9940624/93‑1 (MQ=255)
                                                   ccATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGtc                                      <  1:354343/93‑1 (MQ=255)
                                                    cATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGtca                                     <  2:7692389/93‑1 (MQ=255)
                                                     attattGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGtcat                                    >  2:5710950/1‑93 (MQ=255)
                                                      ttattGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGtcatc                                   >  1:3093909/1‑93 (MQ=255)
                                                      ttattGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGtcatc                                   >  2:705257/1‑93 (MQ=255)
                                                      ttattGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGtcatc                                   >  1:4088913/1‑93 (MQ=255)
                                                        attGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGAGGGTCGATACAGTGCTCCAAGGCTTCCACCGGTCATCaa                                 >  1:7271748/1‑93 (MQ=255)
                                                          tGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAAt                               >  2:7480412/1‑93 (MQ=255)
                                                          tGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAAt                               >  2:9792159/1‑93 (MQ=255)
                                                            ccGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATaa                             >  2:6500051/1‑93 (MQ=255)
                                                               gcgaTAAACGACCAAAGCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAAccg                          <  2:4963413/92‑1 (MQ=255)
                                                                 gaTAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAAccgcc                        >  1:2203929/1‑93 (MQ=255)
                                                                  aTAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGGGCTCCAAAGCTTCCACCGGTCATCAAATAAccgccg                       >  2:7369185/1‑93 (MQ=255)
                                                                   tAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGa                      >  1:8148879/1‑93 (MQ=255)
                                                                   tAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGa                      >  2:6638283/1‑93 (MQ=255)
                                                                    aaaCGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGaa                     >  1:9190139/1‑93 (MQ=255)
                                                                      aCGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCTAGGCTTCCACCGGTCATCAAATAACCGCCGaaaa                   >  1:4262249/1‑93 (MQ=255)
                                                                       cGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAAc                  >  2:8214530/1‑93 (MQ=255)
                                                                        gACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACt                 <  1:3957238/93‑1 (MQ=255)
                                                                         aCCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTg                <  1:6274470/93‑1 (MQ=255)
                                                                          cccAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAAACCCCGAAAAcaga               >  2:958621/1‑90 (MQ=255)
                                                                           ccAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTa              >  2:1795676/1‑93 (MQ=255)
                                                                           ccAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTa              <  2:3295333/93‑1 (MQ=255)
                                                                           ccAACCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTa              <  1:4412738/93‑1 (MQ=255)
                                                                             aagcccTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTAcc            <  2:8160885/90‑1 (MQ=255)
                                                                             aaTCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTAcc            <  2:1229863/93‑1 (MQ=255)
                                                                             aaTCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTAcc            <  2:3611336/93‑1 (MQ=255)
                                                                             aaTCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTAcc            <  2:2558991/93‑1 (MQ=255)
                                                                             aaTCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTAcc            >  1:755094/1‑93 (MQ=255)
                                                                              aTCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCg           >  2:9102819/1‑93 (MQ=255)
                                                                                    gCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAGaaca     >  1:7756255/1‑93 (MQ=255)
                                                                                      aCCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAGaacaac   >  2:3936050/1‑93 (MQ=255)
                                                                                      aCCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAGaacaac   <  2:6906997/93‑1 (MQ=255)
                                                                                       ccGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAGAACAAcc  <  1:6113454/93‑1 (MQ=255)
                                                                                          |                                                                                         
GAGCGACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGGCAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAGAACAACC  >  NC_000913/1974961‑1975140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TGGAGCGACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGGCAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAGAACAACCAGGT  >  NC_000913/1974959‑1975144
                                                                                            |                                                                                             
TGGAGCGACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGAC                                                                                              >  SRR4302540.8762936/1‑94 (MQ=60)
 GGAGCGACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACA                                                                                             >  SRR4302540.5846011/1‑94 (MQ=60)
   AGCGACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAAT                                                                                           >  SRR4302540.355450/1‑94 (MQ=60)
     CGACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAA                                                                                         <  SRR4302540.9942697/94‑1 (MQ=60)
     CGACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAA                                                                                         <  SRR4302540.2172447/94‑1 (MQ=60)
     CGACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAA                                                                                         >  SRR4302540.8047330/1‑94 (MQ=60)
     CGACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAA                                                                                         >  SRR4302540.8866837/1‑94 (MQ=60)
     CGACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAA                                                                                         <  SRR4302540.9722032/94‑1 (MQ=60)
      GACGCAACAGCACCGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGCCCCAATCCCTGCACCGACAATAAT                                                                                        <  SRR4302540.9047222/94‑1 (MQ=60)
      GACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAAT                                                                                        <  SRR4302540.5218645/94‑1 (MQ=60)
      CACGAAACAGCAACCGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGCCCCAATCCCTGCACCGACAATAAT                                                                                        <  SRR4302540.9720635/94‑1 (MQ=60)
       ACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATC                                                                                       <  SRR4302540.8913332/94‑1 (MQ=60)
       ACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATC                                                                                       <  SRR4302540.6625264/94‑1 (MQ=60)
       ACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATC                                                                                       <  SRR4302540.5586726/94‑1 (MQ=60)
         gaaacgcccACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCAC                                                                                     <  SRR4302540.8497602/85‑1 (MQ=60)
         GAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCAC                                                                                     <  SRR4302540.1147845/94‑1 (MQ=60)
         GAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCAC                                                                                     <  SRR4302540.8497600/94‑1 (MQ=60)
         GAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCAC                                                                                     >  SRR4302540.1531947/1‑94 (MQ=60)
         GAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCAC                                                                                     <  SRR4302540.8053289/94‑1 (MQ=60)
         GAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCAC                                                                                     >  SRR4302540.7241138/1‑94 (MQ=60)
         GAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCAC                                                                                     >  SRR4302540.9810508/1‑94 (MQ=60)
          AAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACC                                                                                    <  SRR4302540.1216435/94‑1 (MQ=60)
           AACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACTGACAATAATCACCA                                                                                   >  SRR4302540.997926/1‑94 (MQ=60)
            ACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAG                                                                                  <  SRR4302540.8169943/94‑1 (MQ=60)
            ACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAG                                                                                  <  SRR4302540.9277527/94‑1 (MQ=60)
             CAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGT                                                                                 <  SRR4302540.3639372/94‑1 (MQ=60)
             CAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGT                                                                                 >  SRR4302540.3327745/1‑94 (MQ=60)
              AGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTT                                                                                <  SRR4302540.5449110/94‑1 (MQ=60)
              AGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTT                                                                                >  SRR4302540.407584/1‑94 (MQ=60)
              AGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTT                                                                                <  SRR4302540.410098/94‑1 (MQ=60)
              AGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTT                                                                                <  SRR4302540.7228950/94‑1 (MQ=60)
              AGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCAACAGTT                                                                                >  SRR4302540.407583/1‑94 (MQ=60)
                CAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCA                                                                              <  SRR4302540.5652433/94‑1 (MQ=60)
                CAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCA                                                                              <  SRR4302540.4054783/94‑1 (MQ=60)
                CAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCA                                                                              <  SRR4302540.1717296/94‑1 (MQ=60)
                CAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCCGCACCGACAATAATCACCAGTTCA                                                                              <  SRR4302540.2684127/94‑1 (MQ=60)
                 AACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAG                                                                             >  SRR4302540.7551993/1‑94 (MQ=60)
                 AACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAG                                                                             >  SRR4302540.8950993/1‑94 (MQ=60)
                 AACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAG                                                                             <  SRR4302540.7278447/94‑1 (MQ=60)
                  ACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAGCGACCCAATCCCTGCACCGGCAATAATCAGCAGTTCAGC                                                                            >  SRR4302540.9142109/1‑94 (MQ=60)
                   CGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCG                                                                           <  SRR4302540.3108933/94‑1 (MQ=60)
                   CGGCAGCGCCTTCAGCGGGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCATGCACCGACAATAATCACCAGTGCAGCG                                                                           >  SRR4302540.4108981/1‑94 (MQ=60)
                    GGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGG                                                                          >  SRR4302540.1312656/1‑94 (MQ=60)
                    GGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGG                                                                          >  SRR4302540.1312657/1‑94 (MQ=60)
                      CAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGT                                                                        >  SRR4302540.8189938/1‑94 (MQ=60)
                      CAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGT                                                                        >  SRR4302540.120019/1‑94 (MQ=60)
                      CAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCACTGCACCGACCATACTCACCAGCTCAGCGGGT                                                                        >  SRR4302540.8189939/1‑94 (MQ=60)
                      CAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACACAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGT                                                                        >  SRR4302540.3459347/1‑94 (MQ=60)
                       cgccccctcagcggccccgTAATCGCTTTTCCACGATTGCCGACGATAAACCACCCAACCCCTGCACCGACAATAATCACCAGTTCAGCGGGTT                                                                       <  SRR4302540.4969020/75‑1 (MQ=54)
                       AGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTT                                                                       <  SRR4302540.4969019/94‑1 (MQ=60)
                       AGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTT                                                                       >  SRR4302540.1965130/1‑94 (MQ=60)
                        GCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTG                                                                      >  SRR4302540.8635396/1‑94 (MQ=60)
                        GCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTG                                                                      >  SRR4302540.2580377/1‑94 (MQ=60)
                         CGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGA                                                                     <  SRR4302540.7975079/94‑1 (MQ=60)
                         CGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGA                                                                     <  SRR4302540.1761077/94‑1 (MQ=60)
                          GCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGAT                                                                    <  SRR4302540.8070171/94‑1 (MQ=60)
                          GCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGAT                                                                    <  SRR4302540.4191429/94‑1 (MQ=60)
                          GCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGAT                                                                    >  SRR4302540.10003780/1‑94 (MQ=60)
                          GCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGAT                                                                    <  SRR4302540.1356134/94‑1 (MQ=60)
                           CCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATA                                                                   >  SRR4302540.6967266/1‑94 (MQ=60)
                           CCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATA                                                                   >  SRR4302540.3068990/1‑94 (MQ=60)
                            CTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAG                                                                  >  SRR4302540.624541/1‑94 (MQ=60)
                            CTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAG                                                                  >  SRR4302540.9510181/1‑94 (MQ=60)
                            CTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAG                                                                  >  SRR4302540.2572475/1‑94 (MQ=60)
                            CTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGGTGATAG                                                                  >  SRR4302540.1665261/1‑94 (MQ=60)
                             TTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGA                                                                 >  SRR4302540.4974386/1‑94 (MQ=60)
                              TCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAG                                                                <  SRR4302540.8120674/94‑1 (MQ=60)
                               CAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGT                                                               <  SRR4302540.6654650/94‑1 (MQ=60)
                                AGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTG                                                              <  SRR4302540.4557798/94‑1 (MQ=60)
                                AGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTG                                                              <  SRR4302540.8853881/94‑1 (MQ=60)
                                 GCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGC                                                             >  SRR4302540.10086318/1‑94 (MQ=60)
                                  CGTGCCTTTAATCGCTTTTCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCT                                                            <  SRR4302540.3502961/94‑1 (MQ=60)
                                   GTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTC                                                           >  SRR4302540.6930506/1‑94 (MQ=60)
                                    TGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCC                                                          >  SRR4302540.768423/1‑94 (MQ=60)
                                    TGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCC                                                          >  SRR4302540.4588338/1‑94 (MQ=60)
                                       CTTTGATCGCTTTGCCCTTATTGCCGACGCTAAACGACCCAATCCCTGCACCGACAATAGTCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAG                                                       <  SRR4302540.7759017/94‑1 (MQ=60)
                                       CTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAG                                                       >  SRR4302540.417466/1‑94 (MQ=60)
                                       CTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAG                                                       <  SRR4302540.7759016/94‑1 (MQ=60)
                                       CTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAG                                                       <  SRR4302540.7922284/94‑1 (MQ=60)
                                       CTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAG                                                       <  SRR4302540.7922285/94‑1 (MQ=60)
                                       CTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAG                                                       <  SRR4302540.1468072/94‑1 (MQ=60)
                                       CTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGGGCTCCAAG                                                       >  SRR4302540.7758336/1‑94 (MQ=60)
                                        TTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGG                                                      >  SRR4302540.4357340/1‑94 (MQ=60)
                                        TTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGG                                                      <  SRR4302540.936734/94‑1 (MQ=60)
                                        TTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGG                                                      <  SRR4302540.2697318/94‑1 (MQ=60)
                                          TAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCT                                                    <  SRR4302540.4583082/94‑1 (MQ=60)
                                           AATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTT                                                   >  SRR4302540.9422949/1‑94 (MQ=60)
                                           AATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTT                                                   >  SRR4302540.8290995/1‑94 (MQ=60)
                                           AATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTT                                                   >  SRR4302540.8290994/1‑94 (MQ=60)
                                           AATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTT                                                   >  SRR4302540.5064571/1‑94 (MQ=60)
                                            ATCGCTTTTCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTC                                                  <  SRR4302540.1613681/94‑1 (MQ=60)
                                             TCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCC                                                 <  SRR4302540.3870667/94‑1 (MQ=60)
                                              CGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCA                                                <  SRR4302540.7566278/94‑1 (MQ=60)
                                              CGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCA                                                >  SRR4302540.8539051/1‑94 (MQ=60)
                                               GCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCAC                                               >  SRR4302540.10118472/1‑94 (MQ=60)
                                               GCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCAC                                               >  SRR4302540.3800273/1‑94 (MQ=60)
                                                CTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACC                                              >  SRR4302540.6571067/1‑94 (MQ=60)
                                                CTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACC                                              >  SRR4302540.4580551/1‑94 (MQ=60)
                                                CTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCAAAGGCTTCCACC                                              >  SRR4302540.5331730/1‑94 (MQ=60)
                                                  TTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGG                                            <  SRR4302540.1872106/94‑1 (MQ=60)
                                                  TTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGG                                            >  SRR4302540.9628748/1‑94 (MQ=60)
                                                  TTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGG                                            >  SRR4302540.5322806/1‑94 (MQ=60)
                                                   TGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGT                                           >  SRR4302540.886269/1‑94 (MQ=60)
                                                   TGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGT                                           <  SRR4302540.628935/94‑1 (MQ=60)
                                                    GCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTC                                          <  SRR4302540.10056727/94‑1 (MQ=60)
                                                     cgattatgaCCGACGAGAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCA                                         <  SRR4302540.1147701/85‑1 (MQ=60)
                                                     CCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCA                                         <  SRR4302540.357977/94‑1 (MQ=60)
                                                      CATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCAT                                        >  SRR4302540.5610697/1‑94 (MQ=60)
                                                      CAATAATGCCGAAGAAAAACGACCCAATCCCTGCCCCTACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCAT                                        <  SRR4302540.7361802/94‑1 (MQ=60)
                                                       ATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACGGGTCATC                                       >  SRR4302540.3260425/1‑94 (MQ=60)
                                                       ATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATC                                       >  SRR4302540.2070557/1‑94 (MQ=60)
                                                       ATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATC                                       >  SRR4302540.3260428/1‑94 (MQ=60)
                                                       ATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATC                                       >  SRR4302540.9358259/1‑94 (MQ=60)
                                                       ATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATC                                       >  SRR4302540.4133013/1‑94 (MQ=60)
                                                       ATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATC                                       >  SRR4302540.3127831/1‑94 (MQ=60)
                                                       ATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATC                                       >  SRR4302540.2685939/1‑94 (MQ=60)
                                                       ATTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATC                                       >  SRR4302540.6419449/1‑94 (MQ=60)
                                                        TTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCA                                      >  SRR4302540.5771582/1‑94 (MQ=60)
                                                        TTATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCA                                      <  SRR4302540.2486155/94‑1 (MQ=60)
                                                         TATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAA                                     >  SRR4302540.5887016/1‑94 (MQ=60)
                                                         TATTGCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGAGGGTCGATACAGTGCTCCAAGGCTTCCACCGGTCATCAA                                     >  SRR4302540.7352890/1‑94 (MQ=60)
                                                            TGCCGAAGATAAACCACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATA                                  <  SRR4302540.2684933/94‑1 (MQ=60)
                                                             GCCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAA                                 <  SRR4302540.8101417/94‑1 (MQ=60)
                                                              CCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAAC                                >  SRR4302540.4462179/1‑94 (MQ=60)
                                                              CCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAAC                                >  SRR4302540.9175902/1‑94 (MQ=60)
                                                              CCGACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAAC                                >  SRR4302540.530545/1‑94 (MQ=60)
                                                                GACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCG                              <  SRR4302540.6548816/94‑1 (MQ=60)
                                                                 ACGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGC                             <  SRR4302540.4948236/94‑1 (MQ=60)
                                                                  CGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCC                            >  SRR4302540.7966189/1‑94 (MQ=60)
                                                                  CGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCC                            >  SRR4302540.9628306/1‑94 (MQ=60)
                                                                  CGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCC                            <  SRR4302540.8267927/94‑1 (MQ=60)
                                                                  CGATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCC                            >  SRR4302540.2227739/1‑94 (MQ=60)
                                                                   GATAAACGACCCAATCCCTGCGCCGACAATAATCACCGGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCGCCGGTCATCAAATAACCGCCG                           <  SRR4302540.7790305/94‑1 (MQ=60)
                                                                    ATAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGA                          >  SRR4302540.8243476/1‑94 (MQ=60)
                                                                     TAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAA                         <  SRR4302540.4758209/94‑1 (MQ=60)
                                                                     TAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAA                         >  SRR4302540.1461390/1‑94 (MQ=60)
                                                                     TAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAA                         <  SRR4302540.4389064/94‑1 (MQ=60)
                                                                     TAAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAA                         >  SRR4302540.9300356/1‑94 (MQ=60)
                                                                      AAACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGCAA                        >  SRR4302540.3681528/1‑94 (MQ=60)
                                                                       AACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCTAGGCTTCCACCGGTCATCAAATAACCGCCGAAAA                       >  SRR4302540.4308608/1‑94 (MQ=60)
                                                                        ACGACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAAC                      <  SRR4302540.7793851/94‑1 (MQ=60)
                                                                          GACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTG                    <  SRR4302540.3999932/94‑1 (MQ=60)
                                                                           ACCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGT                   <  SRR4302540.6344276/94‑1 (MQ=60)
                                                                            CCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGGTTCCACCGGCCATCAAGTAAACGCCGAAAACTGTA                  >  SRR4302540.8775156/1‑94 (MQ=60)
                                                                            CCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTA                  <  SRR4302540.5427272/94‑1 (MQ=60)
                                                                            CCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTA                  <  SRR4302540.6091570/94‑1 (MQ=60)
                                                                            CCCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTA                  >  SRR4302540.5219682/1‑94 (MQ=60)
                                                                             CCAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTAC                 <  SRR4302540.4460832/94‑1 (MQ=60)
                                                                             CCAACCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTAC                 <  SRR4302540.4460566/94‑1 (MQ=60)
                                                                              CAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACC                >  SRR4302540.8961486/1‑94 (MQ=60)
                                                                              CAATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACC                >  SRR4302540.763147/1‑94 (MQ=60)
                                                                               AATCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCG               >  SRR4302540.5379351/1‑94 (MQ=60)
                                                                                 TCCCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAG             <  SRR4302540.7102609/94‑1 (MQ=60)
                                                                                   CCTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAGAA           <  SRR4302540.3880334/94‑1 (MQ=60)
                                                                                   CCTGCACCGACAATAATCACCAGTTCAGCGGGCTGATAGAGTGCTCCAAGGCTTCCACCGGCCATCAAATAACCGCCGAAAACTGTACCGAGAA           >  SRR4302540.5749536/1‑94 (MQ=60)
                                                                                    CTGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAGAAC          >  SRR4302540.4314690/1‑94 (MQ=60)
                                                                                     TGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAGAACA         >  SRR4302540.6665312/1‑94 (MQ=60)
                                                                                     TGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAGAACA         >  SRR4302540.8736137/1‑94 (MQ=60)
                                                                                     TGCACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAGAACA         >  SRR4302540.7846866/1‑94 (MQ=60)
                                                                                       CACCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAGAACAAC       <  SRR4302540.228075/94‑1 (MQ=60)
                                                                                         CCGACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAGAACAACCA     <  SRR4302540.6181536/94‑1 (MQ=60)
                                                                                          CGACAATAATCACCAGTTCAGCGGGTTGATAGAGGGCTCCAAGGCTTCCACCGGTCATCAAATAACAGCCGAAAACTGTACCGAGAACAACCAG    >  SRR4302540.4717570/1‑94 (MQ=60)
                                                                                           GACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAGAACAACCAGG   >  SRR4302540.3942815/1‑94 (MQ=60)
                                                                                            ACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAGAACAACCAGGT  <  SRR4302540.5928538/94‑1 (MQ=60)
                                                                                            ACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAGAACAACCAGGT  <  SRR4302540.7570762/94‑1 (MQ=60)
                                                                                            ACAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAGAACAACCAGGA  >  SRR4302540.3435075/1‑94 (MQ=60)
                                                                                            |                                                                                             
TGGAGCGACGAAACAGCAACGGCAGCGCCTTCAGCGTGCCTTTAATCGCTTTGCCATTATTGCCGACGATAAACGACCCAATCCCTGCACCGGCAATAATCACCAGTTCAGCGGGTTGATAGAGTGCTCCAAGGCTTCCACCGGTCATCAAATAACCGCCGAAAACTGTACCGAGAACAACCAGGT  >  NC_000913/1974959‑1975144

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑