Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,987,280	A→G	R78R (CGT→CGC)	yecH ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,987,280	0	A	G	99.7%	997.6 / ‑4.2	307	coding (234/240 nt)	yecH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (155/151); minor base . (1/0); total (156/151)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01

Only 100 of 313 total aligned reads displayed.

TGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGC  >  NC_000913/1987190‑1987369

tGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCg                                                                                         >  2:3545506/1‑93 (MQ=255)

tGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCg                                                                                         <  1:664713/93‑1 (MQ=255)

 gTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCgg                                                                                        >  1:5048031/1‑93 (MQ=255)

 gTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCgg                                                                                        >  2:7679725/1‑93 (MQ=255)

     tttATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCaaa                                                                                    <  1:9199022/93‑1 (MQ=255)

      ttATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAAt                                                                                   <  2:1366530/93‑1 (MQ=255)

       tATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATc                                                                                  >  1:9005155/1‑93 (MQ=255)

       tATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATc                                                                                  <  1:4439895/93‑1 (MQ=255)

       tATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATc                                                                                  >  1:4797158/1‑93 (MQ=255)

        aTCGACAAAGAACTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCt                                                                                 <  1:3865162/93‑1 (MQ=255)

            aCAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTAct                                                                             >  1:6969575/1‑93 (MQ=255)

             cAAAAACCTCTCTCCCCCGGACACAAAAACCTAATGCCCCCGGGCGGCGGTTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTActc                                                                            <  2:7169635/93‑1 (MQ=255)

                 gAACTCTGTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGAt                                                                        >  2:6167460/1‑93 (MQ=255)

                  aaCTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGTGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATc                                                                       <  1:5446005/93‑1 (MQ=255)

                  aaCTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATc                                                                       <  1:4544329/93‑1 (MQ=255)

                   aCTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCg                                                                      >  1:3216543/1‑93 (MQ=255)

                     tctctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGt                                                                    >  1:6036248/1‑93 (MQ=255)

                     tctctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGt                                                                    >  2:401909/1‑93 (MQ=255)

                     tctctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGt                                                                    >  1:5874603/1‑93 (MQ=255)

                       tctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCg                                                                  <  1:3912064/93‑1 (MQ=255)

                        ctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGa                                                                 >  1:2596455/1‑93 (MQ=255)

                         tACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaa                                                                >  1:4070825/1‑93 (MQ=255)

                          aCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCCAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaca                                                               >  1:7648418/1‑91 (MQ=255)

                          aCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaaa                                                               >  1:5177795/1‑93 (MQ=255)

                            ccTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaaaaa                                                             <  2:4538721/93‑1 (MQ=255)

                            ccTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaaaaa                                                             >  1:3308597/1‑93 (MQ=255)

                             cTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAc                                                            <  2:6088930/93‑1 (MQ=255)

                               cGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCg                                                          <  1:5926158/93‑1 (MQ=255)

                               cGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCg                                                          <  2:5094476/93‑1 (MQ=255)

                                 acacacAAAACTAATGCTCTCCTGCGGCAGGATTACTGCCGCCGCCTCGCATCAGCGGCGGCAAATCTTACTTTTATCGCTCGAAACACCgac                                                        >  2:207400/1‑91 (MQ=255)

                                   acacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCtt                                                      >  1:1013711/1‑93 (MQ=255)

                                   acacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCtt                                                      <  2:1210916/93‑1 (MQ=255)

                                   acacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCtt                                                      <  2:1796382/93‑1 (MQ=255)

                                    cacaAACCTAACGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCttt                                                     <  2:2515949/93‑1 (MQ=255)

                                    cacaAAACTAATGCTCTCGGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCttt                                                     <  1:3760084/93‑1 (MQ=255)

                                    cacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCttt                                                     <  2:7062287/93‑1 (MQ=255)

                                      caAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCg                                                   >  1:5730088/1‑93 (MQ=255)

                                       aaaaCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGa                                                  >  1:7812424/1‑93 (MQ=255)

                                       aaaaCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGa                                                  >  1:1468252/1‑93 (MQ=255)

                                        aaaCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGaa                                                 <  1:3715779/93‑1 (MQ=255)

                                         aaCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAg                                                >  2:824941/1‑93 (MQ=255)

                                            tAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGta                                             >  2:9156594/1‑93 (MQ=255)

                                            tAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGta                                             <  1:7382826/93‑1 (MQ=255)

                                             aaTGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGtat                                            >  1:7135892/1‑93 (MQ=255)

                                               tGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATaa                                          >  2:641896/1‑93 (MQ=255)

                                               tGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTATGATCGGTCGAAAAACCGTCTTTCGAAGGTATaa                                          >  2:1134898/1‑93 (MQ=255)

                                                gccctcCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATaaa                                         <  1:9135944/90‑1 (MQ=255)

                                                gCTCTGCAGCGGCAGGTTCACTGCCACCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATaaa                                         <  2:3447681/93‑1 (MQ=255)

                                                 ctctCCGGCGGCAGGTTTGCTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAt                                        <  1:8149035/93‑1 (MQ=255)

                                                  tctcCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAtt                                       <  1:2399055/93‑1 (MQ=255)

                                                  tctcCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAtt                                       <  1:6374121/93‑1 (MQ=255)

                                                   ctcCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAttt                                      >  2:9049812/1‑93 (MQ=255)

                                                   ctcCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAttt                                      >  2:9677440/1‑93 (MQ=255)

                                                    tcCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTg                                     >  1:3542198/1‑93 (MQ=255)

                                                     ccGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGc                                    <  2:6557985/93‑1 (MQ=255)

                                                     ccGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGc                                    <  2:5922709/93‑1 (MQ=255)

                                                     ccGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGc                                    >  2:4288549/1‑93 (MQ=255)

                                                       ggcggcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGCAAAACCGTCTTTCGAAGGGATAAAATTTCCt                                  >  2:9111047/1‑93 (MQ=255)

                                                       ggcggcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCt                                  <  1:9507587/93‑1 (MQ=255)

                                                         cggcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCttt                                <  2:1073543/93‑1 (MQ=255)

                                                         cggcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCttt                                <  1:2791187/93‑1 (MQ=255)

                                                         cggcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCttt                                <  2:5527191/93‑1 (MQ=255)

                                                          ggcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCtttt                               >  2:8706573/1‑93 (MQ=255)

                                                          ggcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCtttt                               <  2:9550207/93‑1 (MQ=255)

                                                           gcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtg                              >  1:557631/1‑93 (MQ=255)

                                                           gcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtg                              >  2:4432414/1‑93 (MQ=255)

                                                            gagttttACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgc                             <  1:1886548/89‑1 (MQ=255)

                                                            cAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgc                             >  1:2113204/1‑93 (MQ=255)

                                                            cAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTAAAAATTTGCCTTTtgc                             <  1:6012830/93‑1 (MQ=255)

                                                             aGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgct                            <  2:2805943/93‑1 (MQ=255)

                                                              ggTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgctg                           >  2:8404259/1‑93 (MQ=255)

                                                              ggTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgctg                           <  2:1680061/93‑1 (MQ=255)

                                                               gTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgctgc                          >  2:4929952/1‑93 (MQ=255)

                                                               gTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgctgc                          <  1:9765888/93‑1 (MQ=255)

                                                               gTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgctgc                          >  1:6737932/1‑93 (MQ=255)

                                                                 ttACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCa                        >  2:3970826/1‑93 (MQ=255)

                                                                   aCTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTGCGCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGa                      <  2:5242441/93‑1 (MQ=255)

                                                                   aCTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGa                      <  1:851569/93‑1 (MQ=255)

                                                                    cTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGaa                     >  2:1967797/1‑93 (MQ=255)

                                                                     tGCCGCGGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGaaa                    <  1:5458718/93‑1 (MQ=255)

                                                                      gccgccGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAAc                   >  2:5672671/1‑93 (MQ=255)

                                                                         gccgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCt                >  1:8335251/1‑93 (MQ=255)

                                                                           cgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTAc              <  2:5028297/93‑1 (MQ=255)

                                                                            gTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTAcc             <  2:3157045/93‑1 (MQ=255)

                                                                             tttCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCa            >  2:9380431/1‑93 (MQ=255)

                                                                             tttCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCa            <  2:7018029/93‑1 (MQ=255)

                                                                             tttCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCa            >  2:6537798/1‑93 (MQ=255)

                                                                             tttCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTACCAGAAACGCTACCa            >  2:471844/1‑93 (MQ=255)

                                                                              ttCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAg           <  2:2952019/93‑1 (MQ=255)

                                                                              ttCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAg           <  1:4746599/93‑1 (MQ=255)

                                                                               tCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGc          <  2:6261995/93‑1 (MQ=255)

                                                                                cAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGct         >  1:684967/1‑93 (MQ=255)

                                                                                  aaTCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGctct       <  2:3778206/93‑1 (MQ=255)

                                                                                    acAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTcc     <  2:10263/92‑1 (MQ=255)

                                                                                     cAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTccc    <  1:1323159/93‑1 (MQ=255)

                                                                                     cAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTccc    >  1:8840339/1‑93 (MQ=255)

                                                                                      aGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACTGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCg   >  2:3032533/1‑93 (MQ=255)

                                                                                      aGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCg   <  2:7131854/93‑1 (MQ=255)

                                                                                      aGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCg   >  2:6837242/1‑93 (MQ=255)

                                                                                      aGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCg   >  2:5218555/1‑93 (MQ=255)

TGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGC  >  NC_000913/1987190‑1987369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GTCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCTGTC  >  NC_000913/1987187‑1987373

GTCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGG                                                                                               <  SRR4302540.237952/94‑1 (MQ=60)

GTCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGG                                                                                               >  SRR4302540.883009/1‑94 (MQ=60)

GTCTGTATTTTATCAACAAAGAACTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGG                                                                                               <  SRR4302540.237951/94‑1 (MQ=60)

  CTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAATCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCG                                                                                             <  SRR4302540.4461853/94‑1 (MQ=60)

  CTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCG                                                                                             >  SRR4302540.4968789/1‑94 (MQ=60)

  CTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCG                                                                                             >  SRR4302540.8123992/1‑94 (MQ=60)

   TGTATTTTATCGACAAAGACCTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGG                                                                                            <  SRR4302540.140998/94‑1 (MQ=60)

   TGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGG                                                                                            >  SRR4302540.5102620/1‑94 (MQ=60)

   TGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGG                                                                                            <  SRR4302540.671842/94‑1 (MQ=60)

    GTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGC                                                                                           >  SRR4302540.3936930/1‑94 (MQ=60)

    GTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGC                                                                                           >  SRR4302540.3936639/1‑94 (MQ=60)

     TATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCA                                                                                          >  SRR4302540.2344248/1‑94 (MQ=60)

      ATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAA                                                                                         >  SRR4302540.6471688/1‑94 (MQ=60)

      ATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAA                                                                                         >  SRR4302540.6471687/1‑94 (MQ=60)

        TTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAAT                                                                                       <  SRR4302540.9530918/94‑1 (MQ=60)

        TTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAAT                                                                                       >  SRR4302540.8991605/1‑94 (MQ=60)

        TTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAAT                                                                                       <  SRR4302540.9309373/94‑1 (MQ=60)

         TTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATC                                                                                      >  SRR4302540.9113191/1‑94 (MQ=60)

         TTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATC                                                                                      >  SRR4302540.4848496/1‑94 (MQ=60)

          TATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCT                                                                                     <  SRR4302540.6030545/94‑1 (MQ=60)

          TATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCT                                                                                     <  SRR4302540.4488008/94‑1 (MQ=60)

           ATCGACAAAGAACTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTT                                                                                    <  SRR4302540.3907178/94‑1 (MQ=60)

           ATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTT                                                                                    <  SRR4302540.2881867/94‑1 (MQ=60)

            TCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTA                                                                                   <  SRR4302540.7030813/94‑1 (MQ=60)

             CGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTAC                                                                                  >  SRR4302540.4208014/1‑94 (MQ=60)

              caaAAAGAACTCTCTACCCTCGACACACAAACCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACT                                                                                 <  SRR4302540.5585032/91‑1 (MQ=60)

              GACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACT                                                                                 >  SRR4302540.7047053/1‑94 (MQ=60)

               ACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTC                                                                                >  SRR4302540.4491948/1‑94 (MQ=60)

                caaagaattctgcaccatgGACACAAAAAACGAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCT                                                                               <  SRR4302540.5507586/75‑1 (MQ=60)

                CAAAGACCTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCT                                                                               <  SRR4302540.5507587/94‑1 (MQ=60)

                 aaggtcttctcgccccacacaaaaaaaaccaatTGCTCTCGGGCGGCGGTTTTTCTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTG                                                                              <  SRR4302540.8956269/61‑1 (MQ=39)

                  AAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGA                                                                             <  SRR4302540.376479/94‑1 (MQ=60)

                   AGACCTCTCTACCCTCGACACACAAATCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGAT                                                                            <  SRR4302540.10077066/94‑1 (MQ=60)

                   AGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGAT                                                                            >  SRR4302540.5520158/1‑94 (MQ=60)

                    GAACTCTCTACCCTCGACACGCAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATC                                                                           <  SRR4302540.3581049/94‑1 (MQ=60)

                     AACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGTGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCG                                                                          <  SRR4302540.5505936/94‑1 (MQ=60)

                     AACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCG                                                                          <  SRR4302540.4593504/94‑1 (MQ=60)

                     AACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCG                                                                          >  SRR4302540.924675/1‑94 (MQ=60)

                     AACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCG                                                                          >  SRR4302540.3251473/1‑94 (MQ=60)

                      ACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGG                                                                         >  SRR4302540.167951/1‑94 (MQ=60)

                       CTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGT                                                                        >  SRR4302540.6103257/1‑94 (MQ=60)

                       CTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGT                                                                        >  SRR4302540.5939541/1‑94 (MQ=60)

                       CTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGC                                                                        >  SRR4302540.3085858/1‑94 (MQ=60)

                          TCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGA                                                                     >  SRR4302540.2624457/1‑94 (MQ=60)

                          TCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGA                                                                     <  SRR4302540.3954448/94‑1 (MQ=60)

                           CTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAA                                                                    >  SRR4302540.5717016/1‑94 (MQ=60)

                           CTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAA                                                                    >  SRR4302540.4114711/1‑94 (MQ=60)

                            TACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCCAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGACA                                                                   >  SRR4302540.7734515/1‑94 (MQ=60)

                            TACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAA                                                                   >  SRR4302540.5234148/1‑94 (MQ=60)

                            TACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAA                                                                   >  SRR4302540.3303706/1‑94 (MQ=60)

                             ACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAA                                                                  >  SRR4302540.7501650/1‑94 (MQ=60)

                             ACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAA                                                                  >  SRR4302540.5164092/1‑94 (MQ=60)

                              CCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAA                                                                 >  SRR4302540.3344843/1‑94 (MQ=60)

                              CCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAA                                                                 >  SRR4302540.120959/1‑94 (MQ=60)

                               CCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAC                                                                <  SRR4302540.9806727/94‑1 (MQ=60)

                               CCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAC                                                                <  SRR4302540.603800/94‑1 (MQ=60)

                                CTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACC                                                               >  SRR4302540.6117588/1‑94 (MQ=60)

                                CTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACC                                                               <  SRR4302540.8341836/94‑1 (MQ=60)

                                  CGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGT                                                             <  SRR4302540.5991637/94‑1 (MQ=60)

                                   GACACACAAAACTAATGCTCTCCGGAGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTC                                                            >  SRR4302540.887684/1‑94 (MQ=60)

                                    ACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCT                                                           >  SRR4302540.4082987/1‑94 (MQ=60)

                                    ACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCT                                                           <  SRR4302540.3008162/94‑1 (MQ=60)

                                     CACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTT                                                          >  SRR4302540.1023986/1‑94 (MQ=60)

                                     CACACAAAACTAATGCTCTCCGGAGGCAGGATTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTT                                                          >  SRR4302540.405553/1‑94 (MQ=60)

                                       CACTAAACTAATGCTCTCCGGCGGAAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCATATCTTACTCTGATCGGTCGGAAAACCGTCGTTC                                                        >  SRR4302540.1085001/1‑94 (MQ=60)

                                       CACAAAACTAATGCTCTCGGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTC                                                        <  SRR4302540.3801105/94‑1 (MQ=60)

                                       CACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTC                                                        <  SRR4302540.6763706/94‑1 (MQ=60)

                                       CACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTC                                                        >  SRR4302540.3401752/1‑94 (MQ=60)

                                       CACAAAACTAATGCTCTCCGGCGGCAGGGTTACTGCCGCCGTTTCAAATCAGTGGCGGGAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTG                                                        >  SRR4302540.2493314/1‑94 (MQ=60)

                                        ACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCG                                                       >  SRR4302540.5793188/1‑94 (MQ=60)

                                         CAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGA                                                      >  SRR4302540.7903722/1‑94 (MQ=60)

                                         CAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGA                                                      >  SRR4302540.1484278/1‑94 (MQ=60)

                                          AAAACTAATGCTCTCCGGCGGCAGGTTTAGTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAA                                                     >  SRR4302540.4647938/1‑94 (MQ=60)

                                          AAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAA                                                     >  SRR4302540.3750363/1‑94 (MQ=60)

                                           AAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAG                                                    <  SRR4302540.3756320/94‑1 (MQ=60)

                                           AAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAG                                                    <  SRR4302540.3275893/94‑1 (MQ=60)

                                           AAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAG                                                    <  SRR4302540.2697623/94‑1 (MQ=60)

                                           AAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAG                                                    <  SRR4302540.5253743/94‑1 (MQ=60)

                                           AAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAG                                                    <  SRR4302540.9114982/94‑1 (MQ=60)

                                            AACTAATGCTCTCCGGCGGCAGTTTTCCTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGG                                                   <  SRR4302540.8975460/94‑1 (MQ=60)

                                               TAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTAT                                                <  SRR4302540.7465088/94‑1 (MQ=60)

                                               TAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTAT                                                >  SRR4302540.7215394/1‑94 (MQ=60)

                                                 ATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTTTAA                                              >  SRR4302540.5719864/1‑94 (MQ=60)

                                                  TGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAACGTCTTTCGAAGGTATAAA                                             >  SRR4302540.5860856/1‑94 (MQ=60)

                                                  TGCGCTCCGGCGCCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAA                                             <  SRR4302540.8178365/94‑1 (MQ=60)

                                                   GCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGATAAACCGTCTTTCGAAGGTATAAAT                                            >  SRR4302540.7360884/1‑94 (MQ=60)

                                                   GCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAT                                            <  SRR4302540.9639886/94‑1 (MQ=60)

                                                   GCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAT                                            >  SRR4302540.4990819/1‑94 (MQ=60)

                                                   GCCCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAT                                            <  SRR4302540.9245728/94‑1 (MQ=60)

                                                    CTCTCCGGCGGCAGTTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATT                                           <  SRR4302540.5572998/94‑1 (MQ=60)

                                                    CTCTCCGGCGGCAGGTTTGCTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATT                                           <  SRR4302540.8243633/94‑1 (MQ=60)

                                                     TCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTT                                          <  SRR4302540.6445091/94‑1 (MQ=60)

                                                     TCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTT                                          <  SRR4302540.2424916/94‑1 (MQ=60)

                                                     TCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTG‑CGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTG                                         >  SRR4302540.3778156/1‑94 (MQ=60)

                                                      CTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTG                                         >  SRR4302540.3580887/1‑94 (MQ=60)

                                                       TCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGC                                        <  SRR4302540.6732845/94‑1 (MQ=60)

                                                         cgggggggggtttcggccgcgcgtgaCAAATCAGTGGCTGCAAATCTTACGCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCT                                      <  SRR4302540.3711445/68‑1 (MQ=60)

                                                          GGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTT                                     >  SRR4302540.6880426/1‑94 (MQ=60)

                                                          GGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTT                                     <  SRR4302540.9620221/94‑1 (MQ=60)

                                                          GGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTT                                     <  SRR4302540.7887887/94‑1 (MQ=60)

                                                           GCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTT                                    >  SRR4302540.9249762/1‑94 (MQ=60)

                                                           GCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTT                                    <  SRR4302540.4807192/94‑1 (MQ=60)

                                                            GGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTT                                   <  SRR4302540.2793545/94‑1 (MQ=60)

                                                            CGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTT                                   <  SRR4302540.2084844/94‑1 (MQ=60)

                                                            CGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTT                                   >  SRR4302540.6618153/1‑94 (MQ=60)

                                                            CGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTT                                   <  SRR4302540.2821324/94‑1 (MQ=60)

                                                             GGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTG                                  >  SRR4302540.1296932/1‑94 (MQ=60)

                                                             GGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTG                                  >  SRR4302540.563704/1‑94 (MQ=60)

                                                             GGCAGGTTTACTCCCGCCGTTTCAAATCAGTGGCGGCAAATCCTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTG                                  <  SRR4302540.8471624/94‑1 (MQ=60)

                                                              GCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGC                                 >  SRR4302540.2135888/1‑94 (MQ=60)

                                                               gagtTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCT                                <  SRR4302540.1907203/90‑1 (MQ=60)

                                                               CAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCT                                <  SRR4302540.6079509/94‑1 (MQ=60)

                                                               CAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTAAAAATTTGCCTTTTGCT                                <  SRR4302540.6079508/94‑1 (MQ=60)

                                                                AGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTG                               >  SRR4302540.1703281/1‑94 (MQ=60)

                                                                AGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTG                               >  SRR4302540.4398210/1‑94 (MQ=60)

                                                                AGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTG                               >  SRR4302540.1374144/1‑94 (MQ=60)

                                                                AGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTG                               <  SRR4302540.7589664/94‑1 (MQ=60)

                                                                 GGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGC                              >  SRR4302540.6812360/1‑94 (MQ=60)

                                                                 GGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGC                              >  SRR4302540.980934/1‑94 (MQ=60)

                                                                 GGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGC                              >  SRR4302540.3485628/1‑94 (MQ=60)

                                                                 GGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGC                              <  SRR4302540.8611733/94‑1 (MQ=60)

                                                                 GGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTCTCGAAGGTATAAATTTGTCTTTTGCTTC                              >  SRR4302540.6812361/1‑94 (MQ=60)

                                                                  GTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCC                             <  SRR4302540.9880414/94‑1 (MQ=60)

                                                                    TTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAATCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAG                           >  SRR4302540.386648/1‑94 (MQ=60)

                                                                    TTACGGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAG                           <  SRR4302540.3888496/94‑1 (MQ=60)

                                                                      ACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAA                         <  SRR4302540.860611/94‑1 (MQ=60)

                                                                       CTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAA                        <  SRR4302540.5961564/94‑1 (MQ=60)

                                                                       CTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAA                        >  SRR4302540.5907145/1‑94 (MQ=60)

                                                                        TGCCGCGGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAAC                       <  SRR4302540.5518794/94‑1 (MQ=60)

                                                                        TGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTTGAAGGTATAAATTTGCCTTTTGCTGCCAGAAAC                       <  SRR4302540.7913098/94‑1 (MQ=60)

                                                                         GCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACG                      <  SRR4302540.6081901/94‑1 (MQ=60)

                                                                          CCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGC                     <  SRR4302540.4216649/94‑1 (MQ=60)

                                                                           CGCCGTTTCAAATCAGTGGCGGCAAATCTTGCTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCT                    <  SRR4302540.6133594/94‑1 (MQ=60)

                                                                           CGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCT                    >  SRR4302540.4512388/1‑94 (MQ=60)

                                                                           CGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCT                    >  SRR4302540.8432003/1‑94 (MQ=60)

                                                                           CGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCT                    <  SRR4302540.8767501/94‑1 (MQ=60)

                                                                            GCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTA                   >  SRR4302540.2430618/1‑94 (MQ=60)

                                                                            GCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTA                   >  SRR4302540.7073099/1‑94 (MQ=60)

                                                                             CCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTAC                  <  SRR4302540.911244/94‑1 (MQ=60)

                                                                             CCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTAC                  >  SRR4302540.10066049/1‑94 (MQ=60)

                                                                              CGTTTCAAATCAGTGGTGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACC                 >  SRR4302540.2231899/1‑94 (MQ=60)

                                                                              CGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACC                 >  SRR4302540.7860829/1‑94 (MQ=60)

                                                                              CGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACC                 >  SRR4302540.2122361/1‑94 (MQ=60)

                                                                                TTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAG               >  SRR4302540.4767732/1‑94 (MQ=60)

                                                                                 TTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGC              <  SRR4302540.5977363/94‑1 (MQ=60)

                                                                                 TTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGC              <  SRR4302540.4797248/94‑1 (MQ=60)

                                                                                  TCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCT             >  SRR4302540.692317/1‑94 (MQ=60)

                                                                                  TCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCT             >  SRR4302540.5480669/1‑94 (MQ=60)

                                                                                  TCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCT             >  SRR4302540.7337055/1‑94 (MQ=60)

                                                                                   CAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTC            >  SRR4302540.7209604/1‑94 (MQ=60)

                                                                                   CAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTC            >  SRR4302540.6954221/1‑94 (MQ=60)

                                                                                    AAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCT           >  SRR4302540.5214303/1‑94 (MQ=60)

                                                                                       TCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCC        >  SRR4302540.8942591/1‑94 (MQ=60)

                                                                                       TCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCC        <  SRR4302540.9407669/94‑1 (MQ=60)

                                                                                       ACAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCC        <  SRR4302540.8390027/94‑1 (MQ=60)

                                                                                        CAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCG       <  SRR4302540.1336953/94‑1 (MQ=60)

                                                                                          GTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCT     <  SRR4302540.4811165/94‑1 (MQ=60)

                                                                                          GTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCT     >  SRR4302540.4078645/1‑94 (MQ=60)

                                                                                            GGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCTGT   >  SRR4302540.6147949/1‑94 (MQ=60)

                                                                                             GCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCTGTC  <  SRR4302540.5176144/94‑1 (MQ=60)

                                                                                             GCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCTGTC  >  SRR4302540.40144/1‑94 (MQ=60)

GTCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCTGTC  >  NC_000913/1987187‑1987373

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`