Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,987,280 |
A→G |
R78R (CGT→CGC) |
yecH ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,987,280 | 0 | A | G | 100.0%
| 663.1
/ NA
| 203 | R78R (CGT→CGC) | yecH | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (112/91); total (112/91) |
Only 100 of 207 total aligned reads displayed.
TGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGC > NC_000913/1987190‑1987369
|
tGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCg > 2:2872075/1‑93 (MQ=255)
tGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCg > 1:1574274/1‑93 (MQ=255)
gTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCgg > 2:4922998/1‑93 (MQ=255)
tATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTggcggc < 2:945415/93‑1 (MQ=255)
tATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTggcggc < 2:557456/93‑1 (MQ=255)
ttttATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCaa > 1:2967097/1‑93 (MQ=255)
ttttATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCaa < 1:2815915/93‑1 (MQ=255)
ttttATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCaa > 2:1411344/1‑93 (MQ=255)
tATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATc > 1:67013/1‑93 (MQ=255)
tATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATc > 2:1581184/1‑93 (MQ=255)
tCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCtt < 2:3029366/93‑1 (MQ=255)
gACAAAGACCTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTAc < 2:4353328/93‑1 (MQ=255)
aCAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTAct < 1:4042703/93‑1 (MQ=255)
aCAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTAct > 2:1171021/1‑93 (MQ=255)
aaaGAACTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTActct < 1:238225/93‑1 (MQ=255)
aaaGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTActct > 1:1886148/1‑93 (MQ=255)
aGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGa > 2:770010/1‑93 (MQ=255)
aGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGa < 1:5559784/93‑1 (MQ=255)
aGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGa < 1:1969960/93‑1 (MQ=255)
gAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCCAATCAGTGGCGGCAAATCTTACTCTGAt > 2:3484387/1‑93 (MQ=255)
gAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGAt > 2:1260262/1‑93 (MQ=255)
aaCTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATc < 2:1717080/93‑1 (MQ=255)
aCTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCg < 1:1213986/93‑1 (MQ=255)
ctctctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCgg > 2:5875338/1‑93 (MQ=255)
ctctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTc > 2:6241715/1‑93 (MQ=255)
ctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGa < 2:5760147/93‑1 (MQ=255)
tACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATTGGTCgga > 1:5772628/1‑91 (MQ=255)
tACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaa > 2:2539575/1‑93 (MQ=255)
tACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaa > 1:4348035/1‑93 (MQ=255)
ccTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaaaaa < 1:1486130/93‑1 (MQ=255)
ccTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaaaaa > 1:5832522/1‑93 (MQ=255)
cTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAc > 2:4797947/1‑93 (MQ=255)
tCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAcc < 2:1511415/93‑1 (MQ=255)
cGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCg < 1:3654560/93‑1 (MQ=255)
gACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGt > 1:5419486/1‑93 (MQ=255)
acacacAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTc < 1:4644888/93‑1 (MQ=255)
acacacAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTc > 2:4073493/1‑93 (MQ=255)
acacacAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTc > 1:6029260/1‑93 (MQ=255)
ccacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTCCTCTGATCGGTCGAAAAACCGTCtt < 2:1956233/92‑1 (MQ=255)
acacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCtt < 1:588554/93‑1 (MQ=255)
acacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCtt < 1:3176248/93‑1 (MQ=255)
acaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTc > 1:1629537/1‑93 (MQ=255)
caAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCg > 2:3747246/1‑93 (MQ=255)
aaaaCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGa > 2:3808723/1‑93 (MQ=255)
aaaCTAATGCTCTCCGGCGGCAGTTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGaa < 2:5465377/93‑1 (MQ=255)
aaCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAg > 1:1004827/1‑93 (MQ=255)
aCTAATGCTCTCCGGCGGCAGTTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAgg < 2:460567/93‑1 (MQ=255)
aCTAATGCTCCCCGGGGGCAGTTTTCCTCCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAgg < 2:136196/93‑1 (MQ=255)
cTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGt > 1:4512953/1‑93 (MQ=255)
cTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTATCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGt > 2:2300158/1‑93 (MQ=255)
tAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGta < 1:4173651/93‑1 (MQ=255)
tAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGta > 1:1708608/1‑93 (MQ=255)
aaTGCTCTCGGGGGGCGGGTTTCCTCCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGtat < 1:3263321/93‑1 (MQ=255)
tGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATaa > 2:2097006/1‑93 (MQ=255)
gCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATaaa < 2:1326864/93‑1 (MQ=255)
gCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATaaa > 1:4384372/1‑93 (MQ=255)
ctctCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAt > 2:6296131/1‑93 (MQ=255)
ctccCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAt < 1:3611790/93‑1 (MQ=255)
tctcCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAtt < 1:2163438/93‑1 (MQ=255)
tctcCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAtt > 2:2039991/1‑93 (MQ=255)
tctcCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAtt > 2:5826320/1‑93 (MQ=255)
ccGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGc < 2:5757678/93‑1 (MQ=255)
cggcggCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGcc > 2:1472869/1‑93 (MQ=255)
cggcggCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGcc < 1:3704530/93‑1 (MQ=255)
cggcggCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGcc < 1:6196579/93‑1 (MQ=255)
gcggcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCtt > 2:3230973/1‑93 (MQ=255)
cggcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCttt < 1:481470/93‑1 (MQ=255)
ggcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCtttt < 1:5718633/93‑1 (MQ=255)
gcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTGACTCTGATCGGTCGAAAAACCGACTTTCGAAGGGATAAATTTGTCTTTtg > 1:3390709/1‑93 (MQ=255)
cAGCTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgc < 2:2128760/93‑1 (MQ=255)
aGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgct < 1:5208341/93‑1 (MQ=255)
aGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgct < 2:2388901/93‑1 (MQ=255)
ggTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgctg > 1:5116986/1‑93 (MQ=255)
ggTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgctg > 1:3222768/1‑93 (MQ=255)
ggTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgctg > 2:5209482/1‑93 (MQ=255)
gTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgctgc < 2:5790125/93‑1 (MQ=255)
gTTTACGCCCCCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgctgc < 1:1119738/93‑1 (MQ=255)
tttACGGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGcc < 1:1517546/93‑1 (MQ=255)
ttACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTTCCa > 1:1439486/1‑93 (MQ=255)
tACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAg > 2:4165260/1‑93 (MQ=255)
tACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAg < 1:973769/93‑1 (MQ=255)
aCTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGa > 2:2939702/1‑93 (MQ=255)
aCTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGa > 1:2855519/1‑93 (MQ=255)
tGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGaaa > 2:4105126/1‑93 (MQ=255)
gccgccGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGaaaa > 2:5318229/1‑92 (MQ=255)
gccgccGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGGATAAATTTGACTTTTGCTGCCAGAAAc > 1:2537136/1‑93 (MQ=255)
ccgccgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACg > 2:2667887/1‑93 (MQ=255)
cgccgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGc > 2:3118377/1‑93 (MQ=255)
gccgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCt > 2:3639329/1‑93 (MQ=255)
cgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTAc > 1:5040782/1‑93 (MQ=255)
cgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTAc < 1:877241/93‑1 (MQ=255)
gTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTAcc > 2:3912828/1‑93 (MQ=255)
tttCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCa > 1:678160/1‑93 (MQ=255)
tttCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCa > 2:1538608/1‑93 (MQ=255)
ttCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAg < 2:3582561/93‑1 (MQ=255)
tCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGc > 1:3436880/1‑93 (MQ=255)
cAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGct < 2:6115576/93‑1 (MQ=255)
cAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGct > 2:6219685/1‑93 (MQ=255)
tCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTcc < 2:5906757/93‑1 (MQ=255)
gTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGc < 1:3834236/93‑1 (MQ=255)
|
TGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGC > NC_000913/1987190‑1987369
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCT > NC_000913/1987188‑1987370
|
TCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCACATCAGTGGC > SRR4302533.6182595/1‑94 (MQ=60)
TCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGC < SRR4302533.3784196/94‑1 (MQ=60)
TCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGC > SRR4302533.3090637/1‑94 (MQ=60)
TCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGCTTACTGCCGCCGTTTCAAATCAGTGGC > SRR4302533.2035091/1‑94 (MQ=60)
CTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCG > SRR4302533.1583754/1‑94 (MQ=60)
CTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCG < SRR4302533.3936629/94‑1 (MQ=60)
CTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCG < SRR4302533.425832/94‑1 (MQ=60)
CTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCG < SRR4302533.1050191/94‑1 (MQ=60)
TGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGG < SRR4302533.3674104/94‑1 (MQ=60)
GTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGC > SRR4302533.2042089/1‑94 (MQ=60)
GTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGC > SRR4302533.4514344/1‑94 (MQ=60)
ATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAA > SRR4302533.2985235/1‑94 (MQ=60)
TTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAA < SRR4302533.2833252/94‑1 (MQ=60)
TTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATC > SRR4302533.67449/1‑94 (MQ=60)
TCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTA > SRR4302533.2280940/1‑94 (MQ=60)
CGACAAAGACCTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTAC < SRR4302533.3441966/94‑1 (MQ=60)
ACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTC < SRR4302533.4067311/94‑1 (MQ=60)
ACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTC < SRR4302533.1346618/94‑1 (MQ=60)
ACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTC < SRR4302533.2970237/94‑1 (MQ=60)
CAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCT > SRR4302533.1897668/1‑94 (MQ=60)
AAAGAACTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTG < SRR4302533.239700/94‑1 (MQ=60)
AAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGA > SRR4302533.3580598/1‑94 (MQ=60)
AGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGAT < SRR4302533.5593386/94‑1 (MQ=60)
AGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGAT < SRR4302533.1982007/94‑1 (MQ=60)
GACCTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATC < SRR4302533.2546980/94‑1 (MQ=60)
AACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCG > SRR4302533.3367390/1‑94 (MQ=60)
CCTCTCTCCCCTCGACACACAAAACTAATGCTCTCGGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGG < SRR4302533.4396094/94‑1 (MQ=60)
ACTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGG < SRR4302533.1221281/94‑1 (MQ=60)
TCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTC > SRR4302533.5052141/1‑94 (MQ=60)
CTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCG > SRR4302533.1493080/1‑94 (MQ=60)
CTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCG > SRR4302533.3690503/1‑94 (MQ=60)
TCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGA > SRR4302533.664903/1‑94 (MQ=60)
TCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGA > SRR4302533.5144219/1‑94 (MQ=60)
CTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATTGGTCGGA > SRR4302533.5807485/1‑94 (MQ=60)
CTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAA > SRR4302533.4374248/1‑94 (MQ=60)
ACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAA > SRR4302533.1504201/1‑94 (MQ=60)
CCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAA > SRR4302533.5867773/1‑94 (MQ=60)
CCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAA > SRR4302533.4599978/1‑94 (MQ=60)
CCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAC > SRR4302533.5661313/1‑94 (MQ=60)
CCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAC < SRR4302533.1495097/94‑1 (MQ=60)
CTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACC > SRR4302533.1809007/1‑94 (MQ=60)
CGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGT < SRR4302533.3677026/94‑1 (MQ=60)
CGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGT > SRR4302533.4374976/1‑94 (MQ=60)
CGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGT > SRR4302533.3998580/1‑94 (MQ=60)
CGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGT > SRR4302533.5452091/1‑94 (MQ=60)
CGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGT > SRR4302533.5842697/1‑94 (MQ=60)
GACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTC > SRR4302533.6065802/1‑94 (MQ=60)
ACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCT < SRR4302533.4673035/94‑1 (MQ=60)
ACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCT < SRR4302533.3733101/94‑1 (MQ=60)
CACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTT > SRR4302533.677865/1‑94 (MQ=60)
ACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTT < SRR4302533.3195785/94‑1 (MQ=60)
ACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTT < SRR4302533.592030/94‑1 (MQ=60)
ACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTT > SRR4302533.1218462/1‑94 (MQ=60)
ACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCCAAAAACCGTCTTT > SRR4302533.2743923/1‑94 (MQ=60)
CACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTC > SRR4302533.1639405/1‑94 (MQ=60)
ACAAACCTAATGCTCTCGGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCG < SRR4302533.5413448/94‑1 (MQ=60)
AAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAG > SRR4302533.1010704/1‑94 (MQ=60)
ACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGT > SRR4302533.4540284/1‑94 (MQ=60)
ACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGT < SRR4302533.1024050/94‑1 (MQ=60)
CTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTA > SRR4302533.1718960/1‑94 (MQ=60)
CTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTA < SRR4302533.1603932/94‑1 (MQ=60)
TAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTAT < SRR4302533.4198944/94‑1 (MQ=60)
AATGCTCTCGGGGGGCGGGTTTCCTCCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATA < SRR4302533.3283451/94‑1 (MQ=60)
AATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATA < SRR4302533.5771659/94‑1 (MQ=60)
TGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAA > SRR4302533.4410843/1‑94 (MQ=60)
GCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAT > SRR4302533.5887934/1‑94 (MQ=60)
CTCCCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATT < SRR4302533.3634018/94‑1 (MQ=60)
TCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTT < SRR4302533.2176750/94‑1 (MQ=60)
CGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCT < SRR4302533.3727283/94‑1 (MQ=60)
CGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCT < SRR4302533.6233755/94‑1 (MQ=60)
CGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTT < SRR4302533.484346/94‑1 (MQ=60)
GGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTG < SRR4302533.5753164/94‑1 (MQ=60)
GGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTGACTCTGATCGGTCGAAAAACCGACTTTCGAAGGGATAAATTTGTCTTTTG > SRR4302533.3411649/1‑94 (MQ=60)
GCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGC > SRR4302533.4776148/1‑94 (MQ=60)
CAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGTCTTTTGCT > SRR4302533.3229767/1‑94 (MQ=60)
CAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCT < SRR4302533.1575084/94‑1 (MQ=60)
AGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTG > SRR4302533.3242643/1‑94 (MQ=60)
AGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTG > SRR4302533.6135704/1‑94 (MQ=60)
AGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTG > SRR4302533.5147909/1‑94 (MQ=60)
AGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTG < SRR4302533.5239717/94‑1 (MQ=60)
GGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGC > SRR4302533.406885/1‑94 (MQ=60)
GGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGC > SRR4302533.1690401/1‑94 (MQ=60)
GTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCC > SRR4302533.1955148/1‑94 (MQ=60)
GTTTACGCCCCCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCC < SRR4302533.1126381/94‑1 (MQ=60)
TTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTTCCA > SRR4302533.1448172/1‑94 (MQ=60)
TTTACGGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCA < SRR4302533.1526680/94‑1 (MQ=60)
TTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAG > SRR4302533.522645/1‑94 (MQ=60)
TACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGA < SRR4302533.979485/94‑1 (MQ=60)
TACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGA > SRR4302533.2873089/1‑94 (MQ=60)
ACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAA < SRR4302533.5479120/94‑1 (MQ=60)
ACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAA > SRR4302533.2991242/1‑94 (MQ=60)
ACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAA < SRR4302533.327911/94‑1 (MQ=60)
TGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGGATAAATTTGACTTTTGCTGCCAGAAAC > SRR4302533.2552756/1‑94 (MQ=60)
CCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTAC > SRR4302533.5071293/1‑94 (MQ=60)
CGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACC < SRR4302533.882391/94‑1 (MQ=60)
CGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACC > SRR4302533.6104537/1‑94 (MQ=60)
GTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCA > SRR4302533.682169/1‑94 (MQ=60)
TTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGC < SRR4302533.2863502/94‑1 (MQ=60)
TTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGC > SRR4302533.3458110/1‑94 (MQ=60)
TCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCT < SRR4302533.697342/94‑1 (MQ=60)
TCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCT > SRR4302533.4255467/1‑94 (MQ=60)
AAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCT < SRR4302533.2850553/94‑1 (MQ=60)
AAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCT > SRR4302533.927623/1‑94 (MQ=60)
ATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCC < SRR4302533.6004751/94‑1 (MQ=60)
GTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCT < SRR4302533.3857667/94‑1 (MQ=60)
GTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCT > SRR4302533.3883362/1‑94 (MQ=60)
GTGGCGGCAAATCTTACTCTGATCGCTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCT > SRR4302533.5174450/1‑94 (MQ=60)
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TCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCT > NC_000913/1987188‑1987370
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
