Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,109,166 A→G V278A (GTC→GCC)  rfbD ← dTDP‑6‑deoxy‑L‑mannose‑dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,109,1660AG99.5% 1353.6 / ‑5.3 419V278A (GTC→GCC) rfbDdTDP‑6‑deoxy‑L‑mannose‑dehydrogenase
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (181/235);  total (182/237)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 451 total aligned reads displayed.

TCACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGACAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACT  >  NC_000913/2109076‑2109255
                                                                                          |                                                                                         
tCACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCaggcaaggca                                                                                         <  1:8375768/93‑1 (MQ=255)
tCACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCaggcaaggca                                                                                         >  2:2625190/1‑93 (MQ=255)
tCACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCaggcaaggca                                                                                         <  2:4664997/93‑1 (MQ=255)
  aCGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGgcaaggcaag                                                                                       >  1:7513979/1‑93 (MQ=255)
  aCGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGgcaaggcaag                                                                                       >  1:2866968/1‑93 (MQ=255)
  aCGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGgcaaggcaag                                                                                       >  2:639350/1‑93 (MQ=255)
   cGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAgc                                                                                      >  2:7107158/1‑93 (MQ=255)
     aaCAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAgcgc                                                                                    >  1:9827869/1‑93 (MQ=255)
       cAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCaa                                                                                  >  2:4479759/1‑93 (MQ=255)
       cAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCaa                                                                                  <  2:8898912/93‑1 (MQ=255)
        aaGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCaaa                                                                                 <  1:6717868/93‑1 (MQ=255)
            tGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTc                                                                             >  1:1206800/1‑93 (MQ=255)
            tGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTc                                                                             <  1:8539689/93‑1 (MQ=255)
              cAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTctg                                                                           >  1:3073881/1‑93 (MQ=255)
               aaaaaCTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTctgc                                                                          >  2:941363/1‑93 (MQ=255)
                aaaaCTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCGCGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTctgct                                                                         <  2:8772877/93‑1 (MQ=255)
                aaaaCTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTctgct                                                                         >  1:377353/1‑93 (MQ=255)
                  aaCTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGa                                                                       <  2:2068081/93‑1 (MQ=255)
                      aTTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAAtt                                                                   >  2:3268717/1‑93 (MQ=255)
                           aTTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCt                                                              >  1:1130861/1‑93 (MQ=255)
                           aTTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCt                                                              >  1:7288380/1‑93 (MQ=255)
                            ttGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTg                                                             <  1:8996424/93‑1 (MQ=255)
                            ttGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTg                                                             <  2:3601552/93‑1 (MQ=255)
                            ttGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTg                                                             >  2:9694511/1‑93 (MQ=255)
                             tGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGt                                                            <  1:1001788/93‑1 (MQ=255)
                             tGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGt                                                            >  2:1050196/1‑93 (MQ=255)
                              gCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTa                                                           <  1:5501692/93‑1 (MQ=255)
                              gCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTa                                                           <  1:5896251/93‑1 (MQ=255)
                              gCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTa                                                           <  2:2460994/93‑1 (MQ=255)
                              gCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTCCTGCTGAAATTTTTCTGtt                                                           >  2:4807379/1‑92 (MQ=255)
                               cTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTAt                                                          >  1:641310/1‑93 (MQ=255)
                                tGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTAtt                                                         <  2:4283197/93‑1 (MQ=255)
                                 gTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTa                                                        <  2:587092/93‑1 (MQ=255)
                                 gTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTa                                                        >  1:6121931/1‑93 (MQ=255)
                                 gTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTa                                                        >  1:7122595/1‑93 (MQ=255)
                                 ctAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTa                                                        <  1:5133032/92‑1 (MQ=255)
                                  tAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTaa                                                       <  2:8091713/93‑1 (MQ=255)
                                   aGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAg                                                      <  1:5543515/93‑1 (MQ=255)
                                   aGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAg                                                      <  1:8264288/93‑1 (MQ=255)
                                    gTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAgg                                                     <  2:3946235/93‑1 (MQ=255)
                                     tCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGAGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGc                                                    >  2:8584067/1‑93 (MQ=255)
                                       gTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCga                                                  >  2:6153211/1‑93 (MQ=255)
                                       gTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCga                                                  <  2:491206/93‑1 (MQ=255)
                                       gTAAATAATTCATTGAGCATTCGTTACGCGCCACCCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCga                                                  <  1:8012189/93‑1 (MQ=255)
                                        tAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCgag                                                 >  1:5777730/1‑93 (MQ=255)
                                         aaaTAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCgaga                                                <  1:1553312/93‑1 (MQ=255)
                                         aaaTAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCgaga                                                >  1:4486484/1‑93 (MQ=255)
                                         aaaTAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCgaga                                                >  1:5659180/1‑93 (MQ=255)
                                          aataatTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGagag                                               <  1:7668299/93‑1 (MQ=255)
                                           ataatTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGt                                              >  1:7469911/1‑93 (MQ=255)
                                            taatTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGtt                                             <  1:3575602/93‑1 (MQ=255)
                                             aatTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTa                                            <  1:8489712/93‑1 (MQ=255)
                                             aatTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTa                                            <  1:8755512/93‑1 (MQ=255)
                                                tCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTAtgt                                         <  1:1786916/93‑1 (MQ=255)
                                                 taTTGATCATTCGTTTCACGCCAACCTGACAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTAtgtg                                        <  1:2133751/92‑1 (MQ=255)
                                                 cATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTAtgtg                                        >  2:579489/1‑93 (MQ=255)
                                                 cATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTAtgtg                                        <  1:9936345/93‑1 (MQ=255)
                                                   ttGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGga                                      <  1:9453416/93‑1 (MQ=255)
                                                   ttGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGga                                      <  2:1126122/93‑1 (MQ=255)
                                                    taaGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGgac                                     >  2:6778479/3‑93 (MQ=255)
                                                    tGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGgac                                     <  2:3756681/93‑1 (MQ=255)
                                                    tGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGgac                                     <  2:9073535/93‑1 (MQ=255)
                                                     gAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGgacg                                    <  1:2357386/93‑1 (MQ=255)
                                                     gAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGgacg                                    <  1:9376665/93‑1 (MQ=255)
                                                       gCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGgacgac                                  <  2:215084/93‑1 (MQ=255)
                                                        cATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGacgacg                                 <  1:3975703/93‑1 (MQ=255)
                                                        cATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGacgacg                                 <  2:7611543/93‑1 (MQ=255)
                                                          ttCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAg                               >  1:2646531/1‑93 (MQ=255)
                                                          ttCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAg                               >  1:4876981/1‑93 (MQ=255)
                                                          ttCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAg                               >  1:3688618/1‑93 (MQ=255)
                                                           tCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGc                              <  2:1412983/93‑1 (MQ=255)
                                                            cGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCt                             >  2:9541096/1‑93 (MQ=255)
                                                            cGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCt                             <  1:663407/93‑1 (MQ=255)
                                                             gTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTg                            <  2:1371991/93‑1 (MQ=255)
                                                             gTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTg                            >  2:6899713/1‑93 (MQ=255)
                                                              tttCACGCCACCCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTgg                           <  2:8333883/93‑1 (MQ=255)
                                                                tCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGgtg                         <  1:4330560/93‑1 (MQ=255)
                                                                   ccccAACCTGCCAGTCAGGCAAGGCAAGCTCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAg                      <  1:6359017/91‑1 (MQ=255)
                                                                     ccAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGa                    <  2:1488162/93‑1 (MQ=255)
                                                                      cAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGAt                   >  2:2759465/1‑93 (MQ=255)
                                                                      cAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGAt                   <  1:6233657/93‑1 (MQ=255)
                                                                       aaCCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATa                  <  2:5073761/93‑1 (MQ=255)
                                                                       aaCCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATa                  >  2:7257711/1‑93 (MQ=255)
                                                                        aCCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAg                 <  1:9324361/93‑1 (MQ=255)
                                                                         ccTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAgg                <  1:7566204/93‑1 (MQ=255)
                                                                          cTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGc               <  1:5960177/93‑1 (MQ=255)
                                                                          cTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGc               <  1:6954430/93‑1 (MQ=255)
                                                                          cTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGc               >  1:3341724/1‑93 (MQ=255)
                                                                           tGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCt              >  2:7808155/1‑93 (MQ=255)
                                                                            gCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCtg             <  1:3228283/93‑1 (MQ=255)
                                                                             ccAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCtgt            >  1:9669674/1‑93 (MQ=255)
                                                                              cAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCtgtt           >  2:3073986/1‑93 (MQ=255)
                                                                               aGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCtgttg          <  2:8141078/93‑1 (MQ=255)
                                                                                gTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCtgttgt         <  1:9515484/93‑1 (MQ=255)
                                                                                 tCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTgttgtt        <  2:1771768/93‑1 (MQ=255)
                                                                                 tCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTgttgtt        >  1:1898479/1‑93 (MQ=255)
                                                                                     gcaaggcaagCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTa    <  1:29737/93‑1 (MQ=255)
                                                                                     gcaaggcaagCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTa    <  1:461751/93‑1 (MQ=255)
                                                                                      cAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTAc   <  1:5246721/93‑1 (MQ=255)
                                                                                      cAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTAc   <  2:9263934/93‑1 (MQ=255)
                                                                                          |                                                                                         
TCACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGACAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACT  >  NC_000913/2109076‑2109255

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 278 total aligned reads displayed.
CCATCACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGACAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGT  >  NC_000913/2109073‑2109259
                                                                                             |                                                                                             
CCATCACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGG                                                                                               >  SRR4302540.7944335/1‑94 (MQ=60)
CCATCACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGG                                                                                               >  SRR4302540.8064585/1‑94 (MQ=60)
CCATCACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGG                                                                                               >  SRR4302540.1739175/1‑94 (MQ=60)
 CATCACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCCGTCAGGCAAGGC                                                                                              >  SRR4302540.2561702/1‑94 (MQ=60)
 CATCACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGC                                                                                              >  SRR4302540.7203730/1‑94 (MQ=60)
 CATCACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGC                                                                                              <  SRR4302540.9372407/94‑1 (MQ=60)
   TCACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAA                                                                                            <  SRR4302540.7246362/94‑1 (MQ=60)
   TCACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAA                                                                                            <  SRR4302540.8472963/94‑1 (MQ=60)
    CACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAG                                                                                           >  SRR4302540.7597986/1‑94 (MQ=60)
    CACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAG                                                                                           >  SRR4302540.7597985/1‑94 (MQ=60)
    CACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAG                                                                                           >  SRR4302540.3215949/1‑94 (MQ=60)
    CACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAG                                                                                           >  SRR4302540.2898086/1‑94 (MQ=60)
     ACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGC                                                                                          <  SRR4302540.7669533/94‑1 (MQ=60)
     ACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGC                                                                                          >  SRR4302540.2978357/1‑94 (MQ=60)
       GAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGC                                                                                        >  SRR4302540.9942829/1‑94 (MQ=60)
        AACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCA                                                                                       >  SRR4302540.8009422/1‑94 (MQ=60)
          CAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAA                                                                                     >  SRR4302540.568842/1‑94 (MQ=60)
          CAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAA                                                                                     >  SRR4302540.9193958/1‑94 (MQ=60)
          CAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAA                                                                                     <  SRR4302540.8209866/94‑1 (MQ=60)
           AAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAG                                                                                    <  SRR4302540.6791985/94‑1 (MQ=60)
           AAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAG                                                                                    <  SRR4302540.1007905/94‑1 (MQ=60)
             GATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTT                                                                                  >  SRR4302540.5560112/1‑94 (MQ=60)
              ATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTC                                                                                 <  SRR4302540.9438230/94‑1 (MQ=60)
              ATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTC                                                                                 <  SRR4302540.6401791/94‑1 (MQ=60)
              ATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTC                                                                                 <  SRR4302540.3942453/94‑1 (MQ=60)
              ATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTC                                                                                 >  SRR4302540.7405052/1‑94 (MQ=60)
              ATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTC                                                                                 <  SRR4302540.6401790/94‑1 (MQ=60)
               TGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCACAGTTCT                                                                                >  SRR4302540.5180808/1‑94 (MQ=60)
               TGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCT                                                                                <  SRR4302540.7059398/94‑1 (MQ=60)
               TGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCT                                                                                <  SRR4302540.8638920/94‑1 (MQ=60)
                 CAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGC                                                                              <  SRR4302540.6234601/94‑1 (MQ=60)
                 CAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGC                                                                              <  SRR4302540.6891631/94‑1 (MQ=60)
                  AAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCT                                                                             >  SRR4302540.9626227/1‑94 (MQ=60)
                  AAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCT                                                                             >  SRR4302540.7597187/1‑94 (MQ=60)
                  AAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCT                                                                             >  SRR4302540.381256/1‑94 (MQ=60)
                  AAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCT                                                                             >  SRR4302540.3060786/1‑94 (MQ=60)
                   AAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTG                                                                            >  SRR4302540.4652153/1‑94 (MQ=60)
                   AAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTG                                                                            >  SRR4302540.4652154/1‑94 (MQ=60)
                    AAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGA                                                                           >  SRR4302540.3887347/1‑94 (MQ=60)
                    AAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGA                                                                           >  SRR4302540.79149/1‑94 (MQ=60)
                    AAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGA                                                                           <  SRR4302540.4719658/94‑1 (MQ=60)
                     AACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAA                                                                          <  SRR4302540.9899138/94‑1 (MQ=60)
                       CTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAAT                                                                        <  SRR4302540.5576609/94‑1 (MQ=60)
                        TATTAAATTGCTGTAGTCGTACATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATT                                                                       >  SRR4302540.5900626/1‑94 (MQ=60)
                        TATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATT                                                                       >  SRR4302540.985369/1‑94 (MQ=60)
                        TATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATT                                                                       >  SRR4302540.3310118/1‑94 (MQ=60)
                        TATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATT                                                                       <  SRR4302540.1641689/94‑1 (MQ=60)
                        TATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATT                                                                       <  SRR4302540.9517908/94‑1 (MQ=60)
                         ATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTT                                                                      <  SRR4302540.9738261/94‑1 (MQ=60)
                         ATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTT                                                                      >  SRR4302540.4973321/1‑94 (MQ=60)
                         ATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTT                                                                      >  SRR4302540.5933913/1‑94 (MQ=60)
                           TAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTT                                                                    >  SRR4302540.8992007/1‑94 (MQ=60)
                           TAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTT                                                                    >  SRR4302540.2002868/1‑94 (MQ=60)
                            AAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTC                                                                   <  SRR4302540.8423361/94‑1 (MQ=60)
                             AATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCT                                                                  >  SRR4302540.1142628/1‑94 (MQ=60)
                             AATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCT                                                                  >  SRR4302540.1244473/1‑94 (MQ=60)
                               TTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGT                                                                <  SRR4302540.9689924/94‑1 (MQ=60)
                               TTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGT                                                                <  SRR4302540.9104343/94‑1 (MQ=60)
                                TGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTA                                                               <  SRR4302540.7336427/94‑1 (MQ=60)
                                TGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTA                                                               >  SRR4302540.8042844/1‑94 (MQ=60)
                                TGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTA                                                               <  SRR4302540.1011966/94‑1 (MQ=60)
                                 GCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTAT                                                              <  SRR4302540.6470769/94‑1 (MQ=60)
                                 GCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTAT                                                              <  SRR4302540.5562285/94‑1 (MQ=60)
                                 GCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTAT                                                              <  SRR4302540.5961366/94‑1 (MQ=60)
                                   TGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTA                                                            >  SRR4302540.7201906/1‑94 (MQ=60)
                                   TGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTA                                                            >  SRR4302540.6190114/1‑94 (MQ=60)
                                   TGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTA                                                            <  SRR4302540.2564486/94‑1 (MQ=60)
                                   TGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTA                                                            <  SRR4302540.111465/94‑1 (MQ=60)
                                    CTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAA                                                           <  SRR4302540.5188622/94‑1 (MQ=60)
                                      AGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGG                                                         >  SRR4302540.3801388/1‑94 (MQ=60)
                                      AGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGG                                                         <  SRR4302540.9603089/94‑1 (MQ=60)
                                      AGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGG                                                         <  SRR4302540.5604578/94‑1 (MQ=60)
                                      AGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGG                                                         >  SRR4302540.5389964/1‑94 (MQ=60)
                                      AGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGG                                                         <  SRR4302540.8360322/94‑1 (MQ=60)
                                      AGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGG                                                         >  SRR4302540.687145/1‑94 (MQ=60)
                                      AGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGG                                                         <  SRR4302540.1767351/94‑1 (MQ=60)
                                      AGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGG                                                         <  SRR4302540.9603088/94‑1 (MQ=60)
                                       GTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGC                                                        <  SRR4302540.6587048/94‑1 (MQ=60)
                                       GTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGC                                                        <  SRR4302540.3250379/94‑1 (MQ=60)
                                       GTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGC                                                        >  SRR4302540.4502961/1‑94 (MQ=60)
                                       ATCGTAAATAATTCATTAAGCATTCGTTCCGCGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGC                                                        <  SRR4302540.8325111/94‑1 (MQ=60)
                                        TCGTAAATAATTCATTGAGCATTCGTTTCGCGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCG                                                       <  SRR4302540.9467709/94‑1 (MQ=60)
                                        TCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCG                                                       <  SRR4302540.2323604/94‑1 (MQ=60)
                                        TCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCG                                                       <  SRR4302540.9467708/94‑1 (MQ=60)
                                          GTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAG                                                     >  SRR4302540.8557506/1‑94 (MQ=60)
                                          GTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAG                                                     >  SRR4302540.5841554/1‑94 (MQ=60)
                                          GTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAG                                                     >  SRR4302540.3539134/1‑94 (MQ=60)
                                          GTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAG                                                     >  SRR4302540.5620674/1‑94 (MQ=60)
                                          GTAAATAATTCATTGAGCATTCGTTACACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAG                                                     <  SRR4302540.4704255/94‑1 (MQ=60)
                                           TAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGA                                                    >  SRR4302540.5721494/1‑94 (MQ=60)
                                           TAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGA                                                    >  SRR4302540.4535146/1‑94 (MQ=60)
                                           TAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGA                                                    >  SRR4302540.115420/1‑94 (MQ=60)
                                            AAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAG                                                   >  SRR4302540.9489793/1‑94 (MQ=60)
                                            AAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAG                                                   <  SRR4302540.1570410/94‑1 (MQ=60)
                                            AAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAG                                                   >  SRR4302540.5286466/1‑94 (MQ=60)
                                            AAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAG                                                   <  SRR4302540.7222016/94‑1 (MQ=60)
                                            AAATAATTCATTGAGCATTCGTTTAACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAG                                                   <  SRR4302540.2902105/94‑1 (MQ=60)
                                             AATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGT                                                  <  SRR4302540.863767/94‑1 (MQ=60)
                                             AATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGT                                                  <  SRR4302540.863766/94‑1 (MQ=60)
                                             AATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGT                                                  >  SRR4302540.3237982/1‑94 (MQ=60)
                                               TAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTA                                                <  SRR4302540.6880179/94‑1 (MQ=60)
                                               TAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTA                                                <  SRR4302540.5256486/94‑1 (MQ=60)
                                               TAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTA                                                <  SRR4302540.3614655/94‑1 (MQ=60)
                                                AATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTAT                                               <  SRR4302540.7731239/94‑1 (MQ=60)
                                                AATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTAT                                               <  SRR4302540.9973354/94‑1 (MQ=60)
                                                AATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTAT                                               <  SRR4302540.9291631/94‑1 (MQ=60)
                                                AATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTAT                                               <  SRR4302540.8857072/94‑1 (MQ=60)
                                                AATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTAT                                               <  SRR4302540.8588354/94‑1 (MQ=60)
                                                AATTAATTGAGCATTCGTTTCACGCCAACCGGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTAT                                               <  SRR4302540.9875902/94‑1 (MQ=60)
                                                 ATTCATTGAGCATTCGTTTCATGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATG                                              <  SRR4302540.6442930/94‑1 (MQ=60)
                                                 ATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATG                                              <  SRR4302540.7645212/94‑1 (MQ=60)
                                                 ATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATG                                              >  SRR4302540.7409141/1‑94 (MQ=60)
                                                  TTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTGAGGCGAGAGTTATGT                                             >  SRR4302540.6357645/1‑94 (MQ=60)
                                                  TTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGT                                             <  SRR4302540.5446159/94‑1 (MQ=60)
                                                   TCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTG                                            >  SRR4302540.48691/1‑94 (MQ=60)
                                                    TATTGATCATTCGTTTCACGCCAACCTGACAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGG                                           <  SRR4302540.2156656/94‑1 (MQ=60)
                                                    TATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGG                                           <  SRR4302540.6699376/94‑1 (MQ=60)
                                                    CATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGG                                           >  SRR4302540.1046968/1‑94 (MQ=60)
                                                    CATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGG                                           <  SRR4302540.8140928/94‑1 (MQ=60)
                                                    CATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGG                                           <  SRR4302540.5100716/94‑1 (MQ=60)
                                                    CATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGG                                           <  SRR4302540.10052295/94‑1 (MQ=60)
                                                     ATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGA                                          <  SRR4302540.9146382/94‑1 (MQ=60)
                                                       TGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACG                                        <  SRR4302540.8544678/94‑1 (MQ=60)
                                                        GAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGA                                       <  SRR4302540.2382777/94‑1 (MQ=60)
                                                        GAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGA                                       <  SRR4302540.9488289/94‑1 (MQ=60)
                                                         AGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGAC                                      <  SRR4302540.3577195/94‑1 (MQ=60)
                                                         AGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGAC                                      <  SRR4302540.6786401/94‑1 (MQ=60)
                                                         AGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGAC                                      <  SRR4302540.8798063/94‑1 (MQ=60)
                                                         AGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGACAAGCGCAAAGTTCTGCTGAACTTTTTCTGTATTAAGGCGAGCGTTATGTGGTCGAC                                      >  SRR4302540.5593931/1‑94 (MQ=60)
                                                           CATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGA                                    >  SRR4302540.3814643/1‑94 (MQ=60)
                                                           CATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGA                                    <  SRR4302540.4018543/94‑1 (MQ=60)
                                                           CATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGGTATGTGGACGACGA                                    >  SRR4302540.3814642/1‑94 (MQ=60)
                                                            ATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAG                                   >  SRR4302540.3728919/1‑94 (MQ=60)
                                                            ATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAG                                   >  SRR4302540.4929330/1‑94 (MQ=60)
                                                            ATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAG                                   >  SRR4302540.2675241/1‑94 (MQ=60)
                                                            ATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAG                                   <  SRR4302540.2863526/94‑1 (MQ=60)
                                                            ATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAG                                   >  SRR4302540.8444925/1‑94 (MQ=60)
                                                            ATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAG                                   <  SRR4302540.3005873/94‑1 (MQ=60)
                                                            ATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAC                                   >  SRR4302540.7720284/1‑94 (MQ=60)
                                                             TTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGC                                  <  SRR4302540.1170171/94‑1 (MQ=60)
                                                             TTCGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGC                                  >  SRR4302540.5877490/1‑94 (MQ=60)
                                                               CGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTG                                >  SRR4302540.6111794/1‑94 (MQ=60)
                                                               CGTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTG                                <  SRR4302540.670519/94‑1 (MQ=60)
                                                                GTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGG                               >  SRR4302540.1819374/1‑94 (MQ=60)
                                                                GTTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGG                               >  SRR4302540.2796551/1‑94 (MQ=60)
                                                                 TTTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGT                              <  SRR4302540.8867501/94‑1 (MQ=60)
                                                                  TTCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTG                             <  SRR4302540.9753586/94‑1 (MQ=60)
                                                                   TCACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGT                            <  SRR4302540.4377699/94‑1 (MQ=60)
                                                                     CCGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAG                          <  SRR4302540.7408958/94‑1 (MQ=60)
                                                                     ACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAG                          >  SRR4302540.7580992/1‑94 (MQ=60)
                                                                     ACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAG                          >  SRR4302540.7580991/1‑94 (MQ=60)
                                                                     ACGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAG                          >  SRR4302540.8588993/1‑94 (MQ=60)
                                                                      CGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGG                         <  SRR4302540.2002229/94‑1 (MQ=60)
                                                                      CGCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGG                         <  SRR4302540.5729565/94‑1 (MQ=60)
                                                                      CCCCAACCTGCCAGTCAGGCAAGGCAAGCTCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGG                         <  SRR4302540.6429830/94‑1 (MQ=60)
                                                                       GCCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGA                        >  SRR4302540.4544831/1‑94 (MQ=60)
                                                                        CCAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGAT                       <  SRR4302540.6274103/94‑1 (MQ=60)
                                                                         CAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATA                      >  SRR4302540.3630623/1‑94 (MQ=60)
                                                                         CAACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATA                      <  SRR4302540.6302985/94‑1 (MQ=60)
                                                                          AACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAG                     <  SRR4302540.6638894/94‑1 (MQ=60)
                                                                          AACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAG                     <  SRR4302540.1319193/94‑1 (MQ=60)
                                                                          AACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAG                     >  SRR4302540.4500717/1‑94 (MQ=60)
                                                                           ACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGG                    <  SRR4302540.6088630/94‑1 (MQ=60)
                                                                           ACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGG                    <  SRR4302540.9435587/94‑1 (MQ=60)
                                                                           ACCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGG                    >  SRR4302540.3073773/1‑94 (MQ=60)
                                                                            CCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGC                   >  SRR4302540.3378393/1‑94 (MQ=60)
                                                                            CCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGC                   >  SRR4302540.3378394/1‑94 (MQ=60)
                                                                            CCTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGC                   <  SRR4302540.7651071/94‑1 (MQ=60)
                                                                             CTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGGAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCT                  >  SRR4302540.1806715/1‑94 (MQ=60)
                                                                             CTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCT                  >  SRR4302540.4246154/1‑94 (MQ=60)
                                                                             CTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCT                  <  SRR4302540.6026107/94‑1 (MQ=60)
                                                                             CTGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCT                  >  SRR4302540.2055544/1‑94 (MQ=60)
                                                                              TGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTG                 >  SRR4302540.2639983/1‑94 (MQ=60)
                                                                              TGCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTG                 >  SRR4302540.2639982/1‑94 (MQ=60)
                                                                               GCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGT                <  SRR4302540.3263387/94‑1 (MQ=60)
                                                                               GCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGT                <  SRR4302540.7044191/94‑1 (MQ=60)
                                                                               GCCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGT                >  SRR4302540.6594793/1‑94 (MQ=60)
                                                                                CCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTT               >  SRR4302540.5999809/1‑94 (MQ=60)
                                                                                CCAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTT               <  SRR4302540.1161264/94‑1 (MQ=60)
                                                                                 CAGTGAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTG              <  SRR4302540.1912130/94‑1 (MQ=60)
                                                                                 CAGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTG              <  SRR4302540.8597858/94‑1 (MQ=60)
                                                                                  AGTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGT             >  SRR4302540.572106/1‑94 (MQ=60)
                                                                                   GTCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTT            <  SRR4302540.9628183/94‑1 (MQ=60)
                                                                                   GTAAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTT            >  SRR4302540.3725304/1‑94 (MQ=60)
                                                                                    TCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTG           <  SRR4302540.9382203/94‑1 (MQ=60)
                                                                                    TCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTG           <  SRR4302540.1634390/94‑1 (MQ=60)
                                                                                    TCAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTG           <  SRR4302540.2176327/94‑1 (MQ=60)
                                                                                     CAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGG          <  SRR4302540.6735812/94‑1 (MQ=60)
                                                                                     CAGGCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGG          <  SRR4302540.10033664/94‑1 (MQ=60)
                                                                                        GCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTAC       <  SRR4302540.466677/94‑1 (MQ=60)
                                                                                        GCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTAC       <  SRR4302540.30051/94‑1 (MQ=60)
                                                                                        GCAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTAC       <  SRR4302540.6021141/94‑1 (MQ=60)
                                                                                         CAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACT      <  SRR4302540.5303946/94‑1 (MQ=60)
                                                                                         CAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACT      <  SRR4302540.869079/94‑1 (MQ=60)
                                                                                         CAAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACT      <  SRR4302540.4164671/94‑1 (MQ=60)
                                                                                          AAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTG     >  SRR4302540.2311407/1‑94 (MQ=60)
                                                                                          AAGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTG     >  SRR4302540.10127411/1‑94 (MQ=60)
                                                                                           AGGCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGG    >  SRR4302540.3499389/1‑94 (MQ=60)
                                                                                             GCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGT  >  SRR4302540.8156891/1‑94 (MQ=60)
                                                                                             GCAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGT  <  SRR4302540.2647525/94‑1 (MQ=60)
                                                                                             |                                                                                             
CCATCACGAACAAGATGCAAAAACTATTAAATTGCTGTAGTCGTAAATAATTCATTGAGCATTCGTTTCACGCCAACCTGCCAGTCAGGCAAGACAAGCGCAAAGTTCTGCTGAAATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGT  >  NC_000913/2109073‑2109259

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑