Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,185,099	T→C	S40S (AGT→AGC)	b2107 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,185,099	0	T	C	99.7%	1089.2 / NA	331	S40S (AGT→AGC)	b2107	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (155/175); minor base G (1/0); total (156/175)
Fisher's exact test for biased strand distribution p-value = 4.71e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 344 total aligned reads displayed.

GTGCGCTTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGTAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCA  >  NC_000913/2185008‑2185188

gTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAagcag                                                                                         <  2:5764247/93‑1 (MQ=255)

 tGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAagcagt                                                                                        <  2:1713711/93‑1 (MQ=255)

   gcgctttGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGtt                                                                                       >  1:7688771/5‑93 (MQ=255)

   gcgctttGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGtt                                                                                       <  1:3444706/89‑1 (MQ=255)

    cgctttGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGttt                                                                                      <  2:9417/90‑1 (MQ=255)

    cgctttGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGttt                                                                                      >  2:4182979/4‑93 (MQ=255)

      ctttGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCa                                                                                    <  2:3632138/92‑1 (MQ=255)

       tttGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCAt                                                                                   <  2:1312682/93‑1 (MQ=255)

         tGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTg                                                                                 >  1:1942540/1‑93 (MQ=255)

          gCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGc                                                                                >  2:6850481/1‑93 (MQ=255)

          gCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGc                                                                                <  2:479868/93‑1 (MQ=255)

            tGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTg                                                                              >  1:8591851/1‑93 (MQ=255)

            tGGTTACCAGTGCCGCCTGGGCCGCACCAGACACCGCGGGTTCGACCAATACCTCGGGAGTTTCTAAGTATGAGTTAAGAAGTTTCATTGCTg                                                                              >  1:6034389/1‑93 (MQ=255)

             ggTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGACTTTCTAAGTATGAGTTAAGCAGTTTCATTGCTgc                                                                             >  2:1003870/1‑92 (MQ=255)

              gTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGAc                                                                            >  1:5438469/1‑93 (MQ=255)

               ttACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACt                                                                           >  1:2253214/1‑93 (MQ=255)

               ttACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACt                                                                           >  2:2975339/1‑93 (MQ=255)

                tACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACtt                                                                          <  1:1664234/93‑1 (MQ=255)

                   cAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTaa                                                                       >  1:8868436/1‑93 (MQ=255)

                   cAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTaa                                                                       <  2:7151141/93‑1 (MQ=255)

                   cAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGAATTTaa                                                                       >  2:3942419/1‑93 (MQ=255)

                     gTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGc                                                                     <  2:1940603/93‑1 (MQ=255)

                      tGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCa                                                                    <  2:9234037/93‑1 (MQ=255)

                       gccgccTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCAt                                                                   <  2:8502282/93‑1 (MQ=255)

                       gccgccTGGGCCGCACCAGCCACCGCGGGTTCGACCAATAACTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCAt                                                                   >  1:5688440/1‑93 (MQ=255)

                         cgccTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCAttt                                                                 >  1:3701788/1‑93 (MQ=255)

                          gccTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTc                                                                <  2:3734763/93‑1 (MQ=255)

                          cgcTGGGCCGCCCCAGCCACCGCGGGTTCGACCAATGCCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTc                                                                <  1:8695927/91‑1 (MQ=255)

                             tGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCaaa                                                             <  1:3564267/93‑1 (MQ=255)

                             tGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCaaa                                                             >  1:6854568/1‑93 (MQ=255)

                              gggCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAAc                                                            <  1:9199726/93‑1 (MQ=255)

                              gggCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAAc                                                            >  1:4606179/1‑93 (MQ=255)

                              gggCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAAc                                                            >  2:6073781/1‑93 (MQ=255)

                               ggCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAAcc                                                           <  1:7953770/93‑1 (MQ=255)

                                gCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCa                                                          <  2:8604107/93‑1 (MQ=255)

                                gCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCa                                                          <  2:6375098/93‑1 (MQ=255)

                                gCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCa                                                          >  2:2779949/1‑93 (MQ=255)

                                  cGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAgg                                                        >  2:3042311/1‑93 (MQ=255)

                                   gCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAggg                                                       >  1:7276878/1‑93 (MQ=255)

                                   gCACCAGCCACCGCGAGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAggg                                                       <  1:7808054/93‑1 (MQ=255)

                                    cACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAgggg                                                      <  2:6690248/93‑1 (MQ=255)

                                     cccAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGa                                                     <  1:4080301/92‑1 (MQ=255)

                                      ccAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGac                                                    >  1:9296983/1‑93 (MQ=255)

                                      ccAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGac                                                    >  1:6973233/1‑93 (MQ=255)

                                      ccAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGac                                                    >  2:6527067/1‑93 (MQ=255)

                                       cAGCCACCGCGGGCTCGACCAATACCTCGGGCATTTCTCAGTATGAGTTCAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGaca                                                   >  2:5174331/1‑93 (MQ=255)

                                         gCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACAcc                                                 >  2:8771088/1‑93 (MQ=255)

                                          ccACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCg                                                >  1:1207581/1‑93 (MQ=255)

                                          ccACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCg                                                <  2:8204437/93‑1 (MQ=255)

                                          ccACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCg                                                <  1:5338472/93‑1 (MQ=255)

                                          ccACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCg                                                <  1:1409791/93‑1 (MQ=255)

                                           cACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGt                                               >  1:1347681/1‑93 (MQ=255)

                                            aCCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTa                                              >  1:1012287/1‑93 (MQ=255)

                                             ccGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTAc                                             <  1:9929108/93‑1 (MQ=255)

                                             ccGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTAc                                             >  2:1482015/1‑93 (MQ=255)

                                               gcgGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCa                                           <  2:3255222/93‑1 (MQ=255)

                                                cgGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAg                                          <  2:8376808/93‑1 (MQ=255)

                                                  ggTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGaa                                        >  1:1769646/1‑93 (MQ=255)

                                                  ggTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGaa                                        >  1:5033508/1‑93 (MQ=255)

                                                   gTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGaaa                                       >  1:7503209/1‑93 (MQ=255)

                                                      cGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATgt                                    <  2:7478563/93‑1 (MQ=255)

                                                        aCCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATgtac                                  >  2:2259975/1‑93 (MQ=255)

                                                        aCCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATgtac                                  <  1:3941174/93‑1 (MQ=255)

                                                         ccAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATgtacc                                 <  2:8003902/93‑1 (MQ=255)

                                                          cAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATgtaccg                                >  2:7270586/1‑93 (MQ=255)

                                                          cAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATgtaccg                                <  1:826795/93‑1 (MQ=255)

                                                           aaTACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATgtaccgt                               >  1:4729100/1‑93 (MQ=255)

                                                           aaTACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATgtaccgt                               >  1:2781524/1‑93 (MQ=255)

                                                             tACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATgtaccgtac                             <  1:2454137/93‑1 (MQ=255)

                                                             tACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATgtaccgtac                             >  2:5917615/1‑93 (MQ=255)

                                                              aCCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATgtaccgtacc                            <  2:786493/93‑1 (MQ=255)

                                                              aCCTCGGGAATTTATAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATgtaccgtacc                            <  1:6093545/93‑1 (MQ=255)

                                                                cTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGa                          <  2:4632361/93‑1 (MQ=255)

                                                                cTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGa                          <  2:9810333/93‑1 (MQ=255)

                                                                   gggAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTTAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGa                       >  2:8176355/1‑93 (MQ=255)

                                                                       aTTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTac                   <  2:4958693/93‑1 (MQ=255)

                                                                       aTTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGCACCGTACCGATGAGTac                   >  1:8993045/1‑93 (MQ=255)

                                                                        tttCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCTTTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTaca                  >  2:9632810/1‑93 (MQ=255)

                                                                        tttCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTaca                  >  2:911367/1‑93 (MQ=255)

                                                                        tttCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTaca                  <  1:1750055/93‑1 (MQ=255)

                                                                          tCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTacaac                <  2:5574787/93‑1 (MQ=255)

                                                                          tCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTacaac                <  1:4274964/93‑1 (MQ=255)

                                                                          tCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTacaac                <  1:6338063/93‑1 (MQ=255)

                                                                          tCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTacaaa                >  1:6765893/1‑92 (MQ=255)

                                                                           cTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTacaaca               <  1:6628860/93‑1 (MQ=255)

                                                                            tAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACAt              >  1:5910064/1‑93 (MQ=255)

                                                                             aaGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACAtt             >  2:2648992/1‑93 (MQ=255)

                                                                              aGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTa            >  1:5655549/1‑93 (MQ=255)

                                                                              aGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTa            <  1:518906/93‑1 (MQ=255)

                                                                                 aTGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGc         <  2:2090432/93‑1 (MQ=255)

                                                                                   gAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAg       <  1:297166/93‑1 (MQ=255)

                                                                                   gAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAg       <  1:7095351/93‑1 (MQ=255)

                                                                                     gTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTg     >  2:693042/1‑93 (MQ=255)

                                                                                     gTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTg     <  1:5472751/93‑1 (MQ=255)

                                                                                     gTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAAGACAACATAAAGCAggg     >  1:2305888/1‑91 (MQ=255)

                                                                                      ttAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTgg    <  1:9352157/93‑1 (MQ=255)

                                                                                       tAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGc   <  1:2052863/93‑1 (MQ=255)

                                                                                       tAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGc   >  1:6218236/1‑93 (MQ=255)

                                                                                        aaGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCa  <  2:1636948/93‑1 (MQ=255)

                                                                                        aaGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCa  >  1:2674195/1‑93 (MQ=255)

GTGCGCTTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGTAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCA  >  NC_000913/2185008‑2185188

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 206 total aligned reads displayed.

GGGTGCGCTTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGTAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCAGTTG  >  NC_000913/2185006‑2185192

GGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCA                                                                                              <  SRR4302540.5411076/94‑1 (MQ=60)

GGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCA                                                                                              <  SRR4302540.2937253/94‑1 (MQ=60)

GGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCA                                                                                              <  SRR4302540.8223588/94‑1 (MQ=60)

 GGTGCGC‑TTTGCTGGGTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAG                                                                                             <  SRR4302540.1891176/94‑1 (MQ=60)

  GTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGT                                                                                            >  SRR4302540.9431271/1‑94 (MQ=60)

   TGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTT                                                                                           >  SRR4302540.7776100/1‑94 (MQ=60)

    ggcgcTTTGCTGGTTACCTGTTCCGCCTGGGCCCCACCAGCCACCGCGGGTTCGACCAATTCCTCGGGAATTTCTAAGTATGAGTTAAGCAGTT                                                                                           <  SRR4302540.5487231/89‑1 (MQ=60)

    GCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTT                                                                                          <  SRR4302540.3482169/94‑1 (MQ=60)

    GCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTT                                                                                          <  SRR4302540.6521712/94‑1 (MQ=60)

    GCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTT                                                                                          <  SRR4302540.8804175/94‑1 (MQ=60)

        CTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGCATTTCTAAGAATGAGTTAAGCAGTTTCAT                                                                                       >  SRR4302540.3537910/1‑94 (MQ=60)

        CTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCAT                                                                                       <  SRR4302540.9647611/94‑1 (MQ=60)

        CTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCAT                                                                                       >  SRR4302540.3537911/1‑94 (MQ=60)

        CTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTATAAGTATGAGTTAAGCAGTTTCAT                                                                                       >  SRR4302540.8677126/1‑94 (MQ=60)

          TTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTG                                                                                     >  SRR4302540.1963689/1‑94 (MQ=60)

          TTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTG                                                                                     >  SRR4302540.173573/1‑94 (MQ=60)

          TTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTG                                                                                     <  SRR4302540.213048/94‑1 (MQ=60)

            tgttgtgACCAGTGCCCCCTTGGCCGCACCAGCCAACGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCT                                                                                   <  SRR4302540.1784030/87‑1 (MQ=60)

            GCTGGTTCCCAGTGCCGCCTGGGCCGCACCAGCCTCCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCT                                                                                   <  SRR4302540.9044549/94‑1 (MQ=60)

            GCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCT                                                                                   <  SRR4302540.1784031/94‑1 (MQ=60)

             CTGGTTCCCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTG                                                                                  <  SRR4302540.4710690/94‑1 (MQ=60)

             CTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGACTTTCTAAGTATGAGTTAAGCAGTTTCATTGCTG                                                                                  >  SRR4302540.1228487/1‑94 (MQ=60)

             CTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTG                                                                                  >  SRR4302540.4992102/1‑94 (MQ=60)

             CTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTG                                                                                  >  SRR4302540.8691733/1‑94 (MQ=60)

             CTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTG                                                                                  >  SRR4302540.1228485/1‑94 (MQ=60)

             CTGGTTACCAGTGCCGCCTGGGCCGCACCAGACACCGCGGGTTCGACCAATACCTCGGGAGTTTCTAAGTATGAGTTAAGAAGTTTCATTGCTG                                                                                  >  SRR4302540.6101365/1‑94 (MQ=60)

              TGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGA                                                                                 <  SRR4302540.5254000/94‑1 (MQ=60)

              TGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGA                                                                                 <  SRR4302540.1989974/94‑1 (MQ=60)

               GGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGAC                                                                                >  SRR4302540.5498297/1‑94 (MQ=60)

               GGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGAC                                                                                >  SRR4302540.6094808/1‑94 (MQ=60)

                GTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACT                                                                               <  SRR4302540.400661/94‑1 (MQ=60)

                GTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACT                                                                               >  SRR4302540.2277399/1‑94 (MQ=60)

                 TTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTT                                                                              <  SRR4302540.1406333/94‑1 (MQ=60)

                 TTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTT                                                                              <  SRR4302540.8210901/94‑1 (MQ=60)

                  TACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTT                                                                             <  SRR4302540.5384181/94‑1 (MQ=60)

                  TACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTT                                                                             <  SRR4302540.1682354/94‑1 (MQ=60)

                   ACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTA                                                                            >  SRR4302540.8809380/1‑94 (MQ=60)

                    CCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAA                                                                           >  SRR4302540.8971058/1‑94 (MQ=60)

                    CCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAA                                                                           <  SRR4302540.9375507/94‑1 (MQ=60)

                     CAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAG                                                                          <  SRR4302540.5519892/94‑1 (MQ=60)

                     CAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAG                                                                          >  SRR4302540.1434831/1‑94 (MQ=60)

                     CAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAG                                                                          <  SRR4302540.8701494/94‑1 (MQ=60)

                      AGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGC                                                                         <  SRR4302540.4841108/94‑1 (MQ=60)

                        TGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCAT                                                                       <  SRR4302540.7086014/94‑1 (MQ=60)

                        TGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATAACTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCAT                                                                       >  SRR4302540.5751056/1‑94 (MQ=60)

                        GGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCAT                                                                       <  SRR4302540.8529965/94‑1 (MQ=60)

                          CCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTT                                                                     >  SRR4302540.3742199/1‑94 (MQ=60)

                           CGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTC                                                                    <  SRR4302540.6063281/94‑1 (MQ=60)

                            cgCTGGGCCGCCCCAGCCACCGCGGGTTCGACCAATGCCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCA                                                                   <  SRR4302540.8796878/92‑1 (MQ=60)

                            GCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCA                                                                   >  SRR4302540.1190281/1‑94 (MQ=60)

                            GCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCA                                                                   <  SRR4302540.46584/94‑1 (MQ=60)

                            GCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCA                                                                   >  SRR4302540.7088093/1‑94 (MQ=60)

                            GCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCA                                                                   <  SRR4302540.73668/94‑1 (MQ=60)

                             CCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAA                                                                  >  SRR4302540.7207750/1‑94 (MQ=60)

                             CCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAA                                                                  <  SRR4302540.6655771/94‑1 (MQ=60)

                              CTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAC                                                                 >  SRR4302540.5806300/1‑94 (MQ=60)

                              CTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAA                                                                 <  SRR4302540.9113717/94‑1 (MQ=60)

                              CTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAA                                                                 <  SRR4302540.9113718/94‑1 (MQ=60)

                              CTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAA                                                                 >  SRR4302540.2672870/1‑94 (MQ=60)

                              CTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAA                                                                 <  SRR4302540.1822355/94‑1 (MQ=60)

                              CTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAA                                                                 >  SRR4302540.6930500/1‑94 (MQ=60)

                               TGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAAC                                                                <  SRR4302540.8349323/94‑1 (MQ=60)

                               TGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAAC                                                                <  SRR4302540.1729892/94‑1 (MQ=60)

                               TGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAAC                                                                <  SRR4302540.3603203/94‑1 (MQ=60)

                               TGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAAC                                                                >  SRR4302540.4655650/1‑94 (MQ=60)

                                GGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACC                                                               <  SRR4302540.9310096/94‑1 (MQ=60)

                                GGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACC                                                               <  SRR4302540.6122303/94‑1 (MQ=60)

                                 GGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCA                                                              >  SRR4302540.10075678/1‑94 (MQ=60)

                                 GGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCA                                                              <  SRR4302540.8046482/94‑1 (MQ=60)

                                  GCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAG                                                             <  SRR4302540.4650716/94‑1 (MQ=60)

                                  GCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAG                                                             <  SRR4302540.3681890/94‑1 (MQ=60)

                                   CCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGG                                                            >  SRR4302540.3231951/1‑94 (MQ=60)

                                   CCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGG                                                            <  SRR4302540.6955883/94‑1 (MQ=60)

                                   CCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGG                                                            <  SRR4302540.5571748/94‑1 (MQ=60)

                                   CCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGG                                                            >  SRR4302540.4827993/1‑94 (MQ=60)

                                   CCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGG                                                            <  SRR4302540.6148751/94‑1 (MQ=60)

                                   CCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGG                                                            <  SRR4302540.446602/94‑1 (MQ=60)

                                   CCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGG                                                            <  SRR4302540.289056/94‑1 (MQ=60)

                                    CGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGG                                                           >  SRR4302540.5335916/1‑94 (MQ=60)

                                    CGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGG                                                           >  SRR4302540.7358070/1‑94 (MQ=60)

                                    CGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGG                                                           <  SRR4302540.2814797/94‑1 (MQ=60)

                                    CGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGG                                                           <  SRR4302540.10085109/94‑1 (MQ=60)

                                     GCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGG                                                          <  SRR4302540.5611087/94‑1 (MQ=60)

                                     GCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGG                                                          <  SRR4302540.6118727/94‑1 (MQ=60)

                                     GCACCAGCCACCGCGAGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGG                                                          <  SRR4302540.7899295/94‑1 (MQ=60)

                                       CCCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGAC                                                        <  SRR4302540.4124296/94‑1 (MQ=60)

                                       ACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGAC                                                        >  SRR4302540.9408052/1‑94 (MQ=60)

                                       ACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGAC                                                        >  SRR4302540.7050733/1‑94 (MQ=60)

                                          AGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACC                                                     <  SRR4302540.6655156/94‑1 (MQ=60)

                                           GCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCG                                                    >  SRR4302540.1219974/1‑94 (MQ=60)

                                           GCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGGATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCG                                                    <  SRR4302540.5738500/94‑1 (MQ=60)

                                            CCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGT                                                   <  SRR4302540.2235446/94‑1 (MQ=60)

                                            CCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGT                                                   >  SRR4302540.1361835/1‑94 (MQ=60)

                                            CCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGT                                                   <  SRR4302540.5396999/94‑1 (MQ=60)

                                            CCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGT                                                   <  SRR4302540.1424976/94‑1 (MQ=60)

                                            CCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGT                                                   <  SRR4302540.4576638/94‑1 (MQ=60)

                                            CCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGT                                                   >  SRR4302540.1361836/1‑94 (MQ=60)

                                             CACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTA                                                  >  SRR4302540.1022554/1‑94 (MQ=60)

                                             CACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTA                                                  >  SRR4302540.3215096/1‑94 (MQ=60)

                                             CACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTA                                                  >  SRR4302540.1022548/1‑94 (MQ=60)

                                             CACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTA                                                  >  SRR4302540.2352759/1‑94 (MQ=60)

                                               CCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACC                                                <  SRR4302540.10045015/94‑1 (MQ=60)

                                                  CGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGA                                             >  SRR4302540.7167387/1‑94 (MQ=60)

                                                   GGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAA                                            >  SRR4302540.5087969/1‑94 (MQ=60)

                                                   GGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAA                                            >  SRR4302540.1788845/1‑94 (MQ=60)

                                                   GGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTAAAGCAGTTTCATTGCTGACTTTAAGCATTTCCAACCAGGGGACACCGTACCAGAA                                            >  SRR4302540.1788844/1‑94 (MQ=60)

                                                    GGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAT                                           >  SRR4302540.6857350/1‑94 (MQ=60)

                                                    GGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAA                                           >  SRR4302540.7587061/1‑94 (MQ=60)

                                                    GGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAA                                           >  SRR4302540.8544878/1‑94 (MQ=60)

                                                    GGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAA                                           >  SRR4302540.2322438/1‑94 (MQ=60)

                                                    GGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAA                                           >  SRR4302540.4265155/1‑94 (MQ=60)

                                                     GTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAAT                                          >  SRR4302540.5438658/1‑94 (MQ=60)

                                                     GTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAAT                                          <  SRR4302540.718400/94‑1 (MQ=60)

                                                         GACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTAC                                      >  SRR4302540.920398/1‑94 (MQ=60)

                                                         GACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTAC                                      >  SRR4302540.3626229/1‑94 (MQ=60)

                                                          ACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACC                                     <  SRR4302540.3983748/94‑1 (MQ=60)

                                                          ACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACC                                     <  SRR4302540.6932573/94‑1 (MQ=60)

                                                          ACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACC                                     <  SRR4302540.3983746/94‑1 (MQ=60)

                                                          ACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACC                                     <  SRR4302540.8832404/94‑1 (MQ=60)

                                                          ACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGCTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACC                                     >  SRR4302540.2760756/1‑94 (MQ=60)

                                                           CCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCG                                    <  SRR4302540.5883607/94‑1 (MQ=60)

                                                            CAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGCAATGTACCGT                                   >  SRR4302540.739040/1‑94 (MQ=60)

                                                            CAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGT                                   <  SRR4302540.835587/94‑1 (MQ=60)

                                                            CAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGT                                   >  SRR4302540.4779602/1‑94 (MQ=60)

                                                            CAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGT                                   >  SRR4302540.2811573/1‑94 (MQ=60)

                                                             AATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATTTACCGTA                                  <  SRR4302540.1417320/94‑1 (MQ=60)

                                                             AATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTA                                  <  SRR4302540.3600512/94‑1 (MQ=60)

                                                             AATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTA                                  >  SRR4302540.4104017/1‑94 (MQ=60)

                                                              ATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTAC                                 >  SRR4302540.9436567/1‑94 (MQ=60)

                                                               TACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACC                                <  SRR4302540.8693950/94‑1 (MQ=60)

                                                               TACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACC                                <  SRR4302540.2480554/94‑1 (MQ=60)

                                                                ACCTCGGGAATTTATAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCG                               <  SRR4302540.6161371/94‑1 (MQ=60)

                                                                 CCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGA                              >  SRR4302540.2559674/1‑94 (MQ=60)

                                                                  CTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGAT                             <  SRR4302540.4129116/94‑1 (MQ=60)

                                                                     GGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAG                          <  SRR4302540.7581608/94‑1 (MQ=60)

                                                                      GGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGT                         >  SRR4302540.1704658/1‑94 (MQ=60)

                                                                        AATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTAC                       <  SRR4302540.7847922/94‑1 (MQ=60)

                                                                        AATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGCACCGTACCGATGAGTAC                       >  SRR4302540.9100890/1‑94 (MQ=60)

                                                                         ATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACA                      >  SRR4302540.6764319/1‑94 (MQ=60)

                                                                          TTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAA                     <  SRR4302540.1769009/94‑1 (MQ=60)

                                                                          TTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAA                     >  SRR4302540.6734009/1‑94 (MQ=60)

                                                                           TTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAAC                    >  SRR4302540.6840667/1‑94 (MQ=60)

                                                                           TTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAAA                    >  SRR4302540.6840666/1‑94 (MQ=60)

                                                                            TCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACA                   <  SRR4302540.4321459/94‑1 (MQ=60)

                                                                            TCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACA                   <  SRR4302540.6408647/94‑1 (MQ=60)

                                                                             CTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACAT                  >  SRR4302540.5975358/1‑94 (MQ=60)

                                                                             CTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACAT                  >  SRR4302540.2970705/1‑94 (MQ=60)

                                                                             CTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACAT                  <  SRR4302540.6702244/94‑1 (MQ=60)

                                                                             CTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACAT                  >  SRR4302540.2310329/1‑94 (MQ=60)

                                                                              TAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATT                 >  SRR4302540.6863500/1‑94 (MQ=60)

                                                                              TAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATT                 >  SRR4302540.1619049/1‑94 (MQ=60)

                                                                               AAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTA                >  SRR4302540.5717820/1‑94 (MQ=60)

                                                                                AGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAA               <  SRR4302540.524471/94‑1 (MQ=60)

                                                                                AGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAA               <  SRR4302540.5110657/94‑1 (MQ=60)

                                                                                AGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAA               >  SRR4302540.4104624/1‑94 (MQ=60)

                                                                                 GTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGTTGAGTACAACATTAAG              >  SRR4302540.9091787/1‑94 (MQ=60)

                                                                                 GTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAG              <  SRR4302540.9400203/94‑1 (MQ=60)

                                                                                 GTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAG              <  SRR4302540.5668563/94‑1 (MQ=60)

                                                                                 GTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAG              >  SRR4302540.2492402/1‑94 (MQ=60)

                                                                                  TATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGC             >  SRR4302540.7878941/1‑94 (MQ=60)

                                                                                   ATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCA            <  SRR4302540.7639031/94‑1 (MQ=60)

                                                                                   ATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCA            >  SRR4302540.1830122/1‑94 (MQ=60)

                                                                                    TGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAG           >  SRR4302540.5752207/1‑94 (MQ=60)

                                                                                    TGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAG           >  SRR4302540.9699953/1‑94 (MQ=60)

                                                                                    TGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAG           <  SRR4302540.7996112/94‑1 (MQ=60)

                                                                                    TGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAG           <  SRR4302540.6321313/94‑1 (MQ=60)

                                                                                     GAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGT          <  SRR4302540.7174312/94‑1 (MQ=60)

                                                                                     GAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGT          <  SRR4302540.300109/94‑1 (MQ=60)

                                                                                     GAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGT          <  SRR4302540.2759980/94‑1 (MQ=60)

                                                                                      AGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTG         >  SRR4302540.6241876/1‑94 (MQ=60)

                                                                                      AGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTG         >  SRR4302540.2330704/1‑94 (MQ=60)

                                                                                      AGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTG         <  SRR4302540.5746196/94‑1 (MQ=60)

                                                                                      AGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTG         >  SRR4302540.6268215/1‑94 (MQ=60)

                                                                                      AGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAAGACAACATAAAGCAGGG         >  SRR4302540.2330705/1‑94 (MQ=60)

                                                                                       GTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGG        >  SRR4302540.8033693/1‑94 (MQ=60)

                                                                                       GTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGG        <  SRR4302540.5532991/94‑1 (MQ=60)

                                                                                       GTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGG        <  SRR4302540.1962773/94‑1 (MQ=60)

                                                                                       GTTAAGCAGTGTCATTGCGGACTTTAAGCATTTCAAACCAGGGGACACCGTAACAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGG        <  SRR4302540.5532990/94‑1 (MQ=60)

                                                                                        TTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGC       <  SRR4302540.7743715/94‑1 (MQ=60)

                                                                                        TTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGC       >  SRR4302540.6287418/1‑94 (MQ=60)

                                                                                        TTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGC       <  SRR4302540.9463542/94‑1 (MQ=60)

                                                                                        TTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGC       >  SRR4302540.6287419/1‑94 (MQ=60)

                                                                                         TAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCA      >  SRR4302540.2703146/1‑94 (MQ=60)

                                                                                         TAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCA      <  SRR4302540.5094030/94‑1 (MQ=60)

                                                                                         TAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCA      <  SRR4302540.2074963/94‑1 (MQ=60)

                                                                                          AAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCAG     <  SRR4302540.2337168/94‑1 (MQ=60)

                                                                                           AGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGTGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCAGT    <  SRR4302540.766057/94‑1 (MQ=60)

                                                                                           AGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCAGT    <  SRR4302540.1237566/94‑1 (MQ=60)

                                                                                           AGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCAGT    <  SRR4302540.880642/94‑1 (MQ=60)

                                                                                           AGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCAGT    <  SRR4302540.4560074/94‑1 (MQ=60)

                                                                                           AGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCAGT    >  SRR4302540.6125963/1‑94 (MQ=60)

                                                                                            GCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCAGTT   <  SRR4302540.7147895/94‑1 (MQ=60)

                                                                                            GCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCAGTT   <  SRR4302540.4966896/94‑1 (MQ=60)

                                                                                            GCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCAGTT   <  SRR4302540.4731030/94‑1 (MQ=60)

                                                                                            GCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCAGTT   <  SRR4302540.7147894/94‑1 (MQ=60)

                                                                                            GCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCAGTT   >  SRR4302540.10083860/1‑94 (MQ=60)

                                                                                            GCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCAGTT   <  SRR4302540.6797398/94‑1 (MQ=60)

                                                                                             CAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCAGTTG  <  SRR4302540.179890/94‑1 (MQ=60)

                                                                                             CAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCAGTTG  >  SRR4302540.3891923/1‑94 (MQ=60)

                                                                                             CAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCAGTTG  >  SRR4302540.7503709/1‑94 (MQ=60)

GGGTGCGCTTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGTAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCAGTTG  >  NC_000913/2185006‑2185192

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 10 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`