Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,186,879	G→A	V684V (GTC→GTT)	yehB ←	putative outer membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,186,879	0	G	A	94.5%	1373.7 / 33.3	420	V684V (GTC→GTT)	yehB	putative outer membrane protein
Reads supporting (aligned to +/- strand): ref base G (10/13); new base A (163/234); total (173/247)
Fisher's exact test for biased strand distribution p-value = 8.30e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.25e-01

Only 100 of 427 total aligned reads displayed.

ATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTGACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACAA  >  NC_000913/2186789‑2186970

aTCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAAc                                                                                           <  2:7799256/93‑1 (MQ=255)

 tCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTGACa                                                                                          >  2:2447182/1‑93 (MQ=255)

 tCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACa                                                                                          <  1:4857397/93‑1 (MQ=255)

 tCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACa                                                                                          <  2:8571953/93‑1 (MQ=255)

 accAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACa                                                                                          <  1:3228243/92‑1 (MQ=255)

   cAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATa                                                                                        >  2:7893118/1‑93 (MQ=255)

   cAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATa                                                                                        <  1:2145813/93‑1 (MQ=255)

    aGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATaa                                                                                       >  2:6575492/1‑93 (MQ=255)

      cATCAGGTGATTTTCCCGATAAGGTGTCATGCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGc                                                                                     <  2:699171/93‑1 (MQ=255)

          aGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCt                                                                                 >  2:5004804/1‑93 (MQ=255)

           ggTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCtt                                                                                >  2:553238/1‑93 (MQ=255)

            gTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCttt                                                                               <  2:9669508/93‑1 (MQ=255)

             tGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTa                                                                              <  2:1315264/93‑1 (MQ=255)

              gATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTaa                                                                             <  2:6041991/93‑1 (MQ=255)

              gATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTaa                                                                             <  2:9009539/93‑1 (MQ=255)

              gATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTaa                                                                             <  2:1397535/93‑1 (MQ=255)

              gATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTaa                                                                             <  1:3847260/93‑1 (MQ=255)

               aTTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAAt                                                                            <  1:8027393/93‑1 (MQ=255)

               aTTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAAt                                                                            <  2:7964348/93‑1 (MQ=255)

               aTTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAAt                                                                            <  1:3455066/93‑1 (MQ=255)

                  ttCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTcc                                                                         <  1:6196623/93‑1 (MQ=255)

                  ttCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTcc                                                                         <  1:8111163/93‑1 (MQ=255)

                   tCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCt                                                                        >  1:9605482/1‑93 (MQ=255)

                   tCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCt                                                                        <  1:7838213/93‑1 (MQ=255)

                     ccGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTGACATAAGCATCTTTAATTCCTgg                                                                      <  1:2829839/93‑1 (MQ=255)

                     ccGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTgg                                                                      >  2:10010762/1‑93 (MQ=255)

                     ccGATAAGGTGCCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTgg                                                                      >  2:8294533/1‑93 (MQ=255)

                      cGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGgc                                                                     <  2:3237615/93‑1 (MQ=255)

                      cGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGgc                                                                     >  1:8657457/1‑93 (MQ=255)

                       gATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGgcg                                                                    <  2:7659528/93‑1 (MQ=255)

                        aTAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGgcgc                                                                   >  1:1034458/1‑93 (MQ=255)

                         tAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCa                                                                  >  2:2974696/1‑93 (MQ=255)

                          aaGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCAt                                                                 <  1:6825935/93‑1 (MQ=255)

                          aaGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCAt                                                                 >  2:5987301/1‑93 (MQ=255)

                            ggTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATtc                                                               >  1:6500992/1‑93 (MQ=255)

                            ggTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATtc                                                               <  1:2649778/93‑1 (MQ=255)

                             gtgtCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATtca                                                              <  1:5883741/93‑1 (MQ=255)

                              tgtCATTCCGTCGTATATCACCACTCCATTACGGATTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGAGCATtcac                                                             >  2:2594042/1‑92 (MQ=255)

                               gtCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCAGCTTTAATTCCTGGCGCATtcatc                                                            <  1:5172679/93‑1 (MQ=255)

                                tCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATtcatca                                                           >  1:2212286/1‑93 (MQ=255)

                                 cATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATcac                                                          <  2:9416501/93‑1 (MQ=255)

                                  aTTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATcaca                                                         <  1:10033502/93‑1 (MQ=255)

                                   ttCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAg                                                        <  1:1425454/93‑1 (MQ=255)

                                    tCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGc                                                       <  1:6881684/93‑1 (MQ=255)

                                      cgtcgtATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCaa                                                     >  2:5470638/1‑93 (MQ=255)

                                        tcgtATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAAc                                                   <  2:1182300/93‑1 (MQ=255)

                                          gtATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGt                                                 >  2:6894533/1‑93 (MQ=255)

                                           tataTCACCACTCCCTTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATCACTGGCGCATTCATCACACCAAACGtt                                                >  1:7623313/1‑93 (MQ=255)

                                           tataTCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGtt                                                <  1:3707734/93‑1 (MQ=255)

                                             tatCACCGCTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTc                                              <  1:1688901/93‑1 (MQ=255)

                                             tatCACCACTCCGTTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTc                                              >  1:1070474/1‑93 (MQ=255)

                                             tatCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTc                                              <  1:632250/93‑1 (MQ=255)

                                             tatCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTc                                              <  1:7505468/93‑1 (MQ=255)

                                                tcccacTCCAGTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGa                                           <  2:6404219/91‑1 (MQ=255)

                                                 accacTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGaa                                          >  1:3292076/1‑93 (MQ=255)

                                                  ccccTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGaaa                                         <  2:2201321/90‑1 (MQ=255)

                                                  ccacTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGaaa                                         >  2:9772960/1‑93 (MQ=255)

                                                  ccacTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGaaa                                         >  1:5646420/1‑93 (MQ=255)

                                                    acTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGa                                       <  2:1520312/93‑1 (MQ=255)

                                                    acTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGa                                       <  1:9836898/93‑1 (MQ=255)

                                                    acTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGa                                       <  2:5690559/93‑1 (MQ=255)

                                                     cTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGAc                                      >  1:8330754/1‑93 (MQ=255)

                                                     cTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGAc                                      >  1:4241536/1‑93 (MQ=255)

                                                     cTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGAc                                      <  2:7096073/93‑1 (MQ=255)

                                                      tCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTGACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACg                                     >  1:8914648/1‑93 (MQ=255)

                                                        cATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGACAGACGGt                                   >  1:2779900/1‑93 (MQ=255)

                                                        cATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGt                                   <  2:1840551/93‑1 (MQ=255)

                                                        cATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGt                                   <  2:4099717/93‑1 (MQ=255)

                                                        cATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGt                                   <  1:2352779/93‑1 (MQ=255)

                                                         aTTACGGTTTGTTGTGCGATATTTTTGCCCATTGACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGtt                                  <  2:4256278/93‑1 (MQ=255)

                                                         aTTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGtt                                  >  2:6761685/1‑93 (MQ=255)

                                                         aTTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGtt                                  >  1:3952570/1‑93 (MQ=255)

                                                         aTTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGAATTCATCACAGCAAACGTTTCGGAAAGACGGtt                                  >  1:8549894/1‑93 (MQ=255)

                                                          tttcGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTc                                 >  1:4371112/4‑93 (MQ=255)

                                                          ttACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTc                                 <  1:4595771/93‑1 (MQ=255)

                                                          ttACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTc                                 <  2:3445230/93‑1 (MQ=255)

                                                            aCGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGc                               <  2:4674206/93‑1 (MQ=255)

                                                            aCGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGc                               >  1:2519077/1‑93 (MQ=255)

                                                               gTTTGTTGTGCGATATTTTTGCCCATTGACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAg                            >  2:2349543/1‑93 (MQ=255)

                                                               gTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAg                            >  2:5315196/1‑93 (MQ=255)

                                                               gTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAg                            >  1:7250475/1‑93 (MQ=255)

                                                                tttGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGa                           <  2:9162752/93‑1 (MQ=255)

                                                                 ttgttgTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACAGTTCGCCAGAt                          <  1:2979699/93‑1 (MQ=255)

                                                                 ttgttgTGCGATATTTTTGACCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGAt                          <  1:1667034/93‑1 (MQ=255)

                                                                  tgttgtGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGAtt                         <  2:5775371/93‑1 (MQ=255)

                                                                   gttgtGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTa                        >  1:1841067/1‑93 (MQ=255)

                                                                    ttgtGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTaa                       <  1:919771/93‑1 (MQ=255)

                                                                    ttgtGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTaa                       >  2:8367581/1‑93 (MQ=255)

                                                                     tgtgCGATATTTTTGCCCATTGACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAAc                      <  2:8897178/93‑1 (MQ=255)

                                                                      gtgCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACg                     >  2:3627199/1‑93 (MQ=255)

                                                                       tgCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGc                    >  1:4715993/1‑93 (MQ=255)

                                                                         cGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCa                  >  2:734194/1‑93 (MQ=255)

                                                                           atatTTTTGCCCATTGACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCAcc                <  2:1998324/93‑1 (MQ=255)

                                                                           atatTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCAcc                >  1:1292044/1‑93 (MQ=255)

                                                                           atatTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCAAcc                >  1:3605569/1‑93 (MQ=255)

                                                                            tatTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCAccc               >  2:4410513/1‑93 (MQ=255)

                                                                                 ttGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCa          <  2:617241/93‑1 (MQ=255)

                                                                                    cccATTGACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGc       <  1:7049405/93‑1 (MQ=255)

                                                                                      cATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGa     >  2:3926700/1‑93 (MQ=255)

                                                                                       aTTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGCTTAACGCCACCCGACCAGGCGAc    >  2:3521150/1‑93 (MQ=255)

ATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTGACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACAA  >  NC_000913/2186789‑2186970

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 231 total aligned reads displayed.

CACATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTGACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACAATG  >  NC_000913/2186786‑2186972

cagatccaccctgAGGTGCTTTTCCCGATAATGTGTCAGTCCGTCGTATATCACCACTCCATTGCGGTTTGTTGTGCGATATTTTTGCCCATTA                                                                                               <  SRR4302540.4275582/81‑1 (MQ=60)

CACATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTA                                                                                               <  SRR4302540.9212974/94‑1 (MQ=60)

CACATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTA                                                                                               <  SRR4302540.2701033/94‑1 (MQ=60)

CACATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTA                                                                                               <  SRR4302540.5575178/94‑1 (MQ=60)

  CATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAAC                                                                                             >  SRR4302540.5893605/1‑94 (MQ=60)

   ATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACA                                                                                            <  SRR4302540.6440836/94‑1 (MQ=60)

    TCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACAT                                                                                           <  SRR4302540.4909471/94‑1 (MQ=60)

    ACCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACAT                                                                                           <  SRR4302540.3263347/94‑1 (MQ=60)

     CCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATA                                                                                          >  SRR4302540.2897335/1‑94 (MQ=60)

     CCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATA                                                                                          >  SRR4302540.7889385/1‑94 (MQ=60)

      CAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAA                                                                                         <  SRR4302540.2168880/94‑1 (MQ=60)

      CAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAA                                                                                         >  SRR4302540.8194029/1‑94 (MQ=60)

       AGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAG                                                                                        <  SRR4302540.3962906/94‑1 (MQ=60)

       AGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAG                                                                                        >  SRR4302540.3212395/1‑94 (MQ=60)

        GCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGC                                                                                       <  SRR4302540.2630985/94‑1 (MQ=60)

         CATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCA                                                                                      >  SRR4302540.8448132/1‑94 (MQ=60)

         CATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCA                                                                                      >  SRR4302540.8448133/1‑94 (MQ=60)

          ATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCAT                                                                                     >  SRR4302540.5369575/1‑94 (MQ=60)

          ATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCAT                                                                                     >  SRR4302540.1388250/1‑94 (MQ=60)

          ATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCAT                                                                                     <  SRR4302540.1503070/94‑1 (MQ=60)

          ATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCAT                                                                                     <  SRR4302540.8684123/94‑1 (MQ=60)

          ATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCAT                                                                                     <  SRR4302540.2816945/94‑1 (MQ=60)

          ATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCAT                                                                                     >  SRR4302540.3708085/1‑94 (MQ=60)

          ATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCAT                                                                                     >  SRR4302540.9549130/1‑94 (MQ=60)

          ATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCAT                                                                                     >  SRR4302540.1874505/1‑94 (MQ=60)

          ATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACAACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCAT                                                                                     >  SRR4302540.6357766/1‑94 (MQ=60)

             AGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTT                                                                                  >  SRR4302540.1080118/1‑94 (MQ=60)

             AGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTT                                                                                  >  SRR4302540.9775760/1‑94 (MQ=60)

             AGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTT                                                                                  >  SRR4302540.7513457/1‑94 (MQ=60)

             AGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTT                                                                                  >  SRR4302540.4079104/1‑94 (MQ=60)

             AGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTT                                                                                  <  SRR4302540.1702423/94‑1 (MQ=60)

              GGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTGACATAAGCATCTTT                                                                                 >  SRR4302540.361655/1‑94 (MQ=60)

              GGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTT                                                                                 <  SRR4302540.8847611/94‑1 (MQ=60)

              GGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTT                                                                                 >  SRR4302540.6136243/1‑94 (MQ=60)

               GTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTA                                                                                <  SRR4302540.782616/94‑1 (MQ=60)

                TGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAA                                                                               <  SRR4302540.2691325/94‑1 (MQ=60)

                 GATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAAT                                                                              <  SRR4302540.3889096/94‑1 (MQ=60)

                 GATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCACATTAACATAAGCATCTTTAAT                                                                              <  SRR4302540.5613988/94‑1 (MQ=60)

                  ATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATT                                                                             <  SRR4302540.8120741/94‑1 (MQ=60)

                  ATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATT                                                                             <  SRR4302540.3418987/94‑1 (MQ=60)

                  ATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATT                                                                             <  SRR4302540.3492665/94‑1 (MQ=60)

                  ATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATT                                                                             <  SRR4302540.3492666/94‑1 (MQ=60)

                  ATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATT                                                                             <  SRR4302540.8703623/94‑1 (MQ=60)

                   TTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTC                                                                            >  SRR4302540.3316941/1‑94 (MQ=60)

                    TTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCC                                                                           <  SRR4302540.4558611/94‑1 (MQ=60)

                     TTGCCGATAAGGTGTCAGTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCT                                                                          <  SRR4302540.8205301/94‑1 (MQ=60)

                     TTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCT                                                                          <  SRR4302540.7993328/94‑1 (MQ=60)

                     TTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCT                                                                          <  SRR4302540.3938707/94‑1 (MQ=60)

                     TTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCT                                                                          <  SRR4302540.6265611/94‑1 (MQ=60)

                     TTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCT                                                                          >  SRR4302540.9718769/1‑94 (MQ=60)

                     TTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCT                                                                          <  SRR4302540.8205302/94‑1 (MQ=60)

                      TCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTTTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTG                                                                         <  SRR4302540.7929793/94‑1 (MQ=60)

                      TCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTGACATAAGCATCTTTAATTCCTG                                                                         <  SRR4302540.199886/94‑1 (MQ=60)

                      TCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTG                                                                         >  SRR4302540.3680536/1‑94 (MQ=60)

                      TCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTG                                                                         <  SRR4302540.7929792/94‑1 (MQ=60)

                       TCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGG                                                                        <  SRR4302540.1633252/94‑1 (MQ=60)

                       CCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGG                                                                        <  SRR4302540.8210149/94‑1 (MQ=60)

                       CCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGG                                                                        >  SRR4302540.1041608/1‑94 (MQ=60)

                       CCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGG                                                                        >  SRR4302540.3793015/1‑94 (MQ=60)

                       CCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGG                                                                        <  SRR4302540.4673818/94‑1 (MQ=60)

                       CCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGG                                                                        <  SRR4302540.1409265/94‑1 (MQ=60)

                       CCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGG                                                                        <  SRR4302540.139837/94‑1 (MQ=60)

                        CCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTGACATAAGCATCTTTAATTCCTGGC                                                                       <  SRR4302540.2860448/94‑1 (MQ=60)

                        CCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTGACATAAGCATCTTTAATTCCTGGC                                                                       <  SRR4302540.2860449/94‑1 (MQ=60)

                        CCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGC                                                                       <  SRR4302540.4392980/94‑1 (MQ=60)

                        CCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGC                                                                       >  SRR4302540.8758026/1‑94 (MQ=60)

                        CCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACACAAGCATCTTTAATCCCTGGC                                                                       >  SRR4302540.2441463/1‑94 (MQ=60)

                         CGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCG                                                                      >  SRR4302540.7618857/1‑94 (MQ=60)

                          GATAAGGTGTCATTCCGTCGTATGTCACCACTCCATGACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGC                                                                     >  SRR4302540.1855639/1‑94 (MQ=60)

                           ATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCA                                                                    <  SRR4302540.4731002/94‑1 (MQ=60)

                             AAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATT                                                                  <  SRR4302540.6901506/94‑1 (MQ=60)

                              AGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTC                                                                 >  SRR4302540.3996109/1‑94 (MQ=60)

                               GGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCA                                                                >  SRR4302540.3535318/1‑94 (MQ=60)

                               GGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCA                                                                >  SRR4302540.2324267/1‑94 (MQ=60)

                               GGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCA                                                                <  SRR4302540.7423023/94‑1 (MQ=60)

                               GGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCA                                                                >  SRR4302540.3293307/1‑94 (MQ=60)

                                GTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCAT                                                               <  SRR4302540.4319202/94‑1 (MQ=60)

                                GTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCAT                                                               <  SRR4302540.5948753/94‑1 (MQ=60)

                                GTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCAT                                                               <  SRR4302540.4795811/94‑1 (MQ=60)

                                 TGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATC                                                              <  SRR4302540.2811589/94‑1 (MQ=60)

                                  GTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCGATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCA                                                             >  SRR4302540.8082510/1‑94 (MQ=60)

                                  GTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCA                                                             >  SRR4302540.2236175/1‑94 (MQ=60)

                                  GTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCA                                                             >  SRR4302540.1099935/1‑94 (MQ=60)

                                   TCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGTGCATTCATCAC                                                            >  SRR4302540.4320483/1‑94 (MQ=60)

                                   TCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCAC                                                            <  SRR4302540.5110764/94‑1 (MQ=60)

                                   TCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCAC                                                            >  SRR4302540.5886895/1‑94 (MQ=60)

                                   TCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCAC                                                            <  SRR4302540.2789532/94‑1 (MQ=60)

                                   TCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCAC                                                            <  SRR4302540.6817495/94‑1 (MQ=60)

                                     ATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAG                                                          <  SRR4302540.10150206/94‑1 (MQ=60)

                                     ATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAG                                                          <  SRR4302540.7680994/94‑1 (MQ=60)

                                      TTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGC                                                         <  SRR4302540.1440886/94‑1 (MQ=60)

                                       TCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCA                                                        >  SRR4302540.9059925/1‑94 (MQ=60)

                                       TCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCA                                                        <  SRR4302540.6957968/94‑1 (MQ=60)

                                          GTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAAC                                                     <  SRR4302540.10070680/94‑1 (MQ=60)

                                          GTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAAC                                                     <  SRR4302540.3061148/94‑1 (MQ=60)

                                           TCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACG                                                    >  SRR4302540.6220384/1‑94 (MQ=60)

                                             GTATATCACCACTCCCTTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATCACTGGCGCATTCATCACACCAAACGTT                                                  >  SRR4302540.7709047/1‑94 (MQ=60)

                                             GTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTT                                                  >  SRR4302540.7709045/1‑94 (MQ=60)

                                              TATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAGTTCCTGGCGCATTCATCACAGCAAACGTTT                                                 >  SRR4302540.5208672/1‑94 (MQ=60)

                                              TATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTT                                                 <  SRR4302540.6347824/94‑1 (MQ=60)

                                              TATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTT                                                 <  SRR4302540.6042043/94‑1 (MQ=60)

                                              TATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTT                                                 <  SRR4302540.2946298/94‑1 (MQ=60)

                                              TATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTT                                                 <  SRR4302540.1688257/94‑1 (MQ=60)

                                              TATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTT                                                 <  SRR4302540.1659300/94‑1 (MQ=60)

                                               ATATCACCACTCCGTTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTC                                                >  SRR4302540.1081386/1‑94 (MQ=60)

                                               ATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTC                                                <  SRR4302540.6563621/94‑1 (MQ=60)

                                               ATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTC                                                >  SRR4302540.9690349/1‑94 (MQ=60)

                                               ATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTC                                                >  SRR4302540.2517777/1‑94 (MQ=60)

                                               ATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTC                                                >  SRR4302540.1081385/1‑94 (MQ=60)

                                                TATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCG                                               <  SRR4302540.6927060/94‑1 (MQ=60)

                                                TATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCG                                               <  SRR4302540.7589356/94‑1 (MQ=60)

                                                TATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCG                                               <  SRR4302540.638972/94‑1 (MQ=60)

                                                 ATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGG                                              <  SRR4302540.3831234/94‑1 (MQ=60)

                                                   CACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAACCGTTTCGGAA                                            >  SRR4302540.3328096/1‑94 (MQ=60)

                                                   CACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAA                                            >  SRR4302540.3328095/1‑94 (MQ=60)

                                                   CACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAA                                            <  SRR4302540.8724623/94‑1 (MQ=60)

                                                   CACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAA                                            >  SRR4302540.6813451/1‑94 (MQ=60)

                                                   CACCACTCCATTACGGTTTGTTGTGCGACATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAA                                            <  SRR4302540.379260/94‑1 (MQ=60)

                                                    ACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAA                                           >  SRR4302540.5708566/1‑94 (MQ=60)

                                                     CCACTCCATTTCGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAG                                          <  SRR4302540.1142292/94‑1 (MQ=60)

                                                     CCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAG                                          <  SRR4302540.1031153/94‑1 (MQ=60)

                                                     CCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAG                                          <  SRR4302540.5074963/94‑1 (MQ=60)

                                                      CACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTACTGGCGCATTCATCACAGCAAACGTTTCGGAAAGA                                         >  SRR4302540.4521068/1‑94 (MQ=60)

                                                       ACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGAC                                        <  SRR4302540.7197097/94‑1 (MQ=60)

                                                       ACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGAC                                        >  SRR4302540.8427452/1‑94 (MQ=60)

                                                       ACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGAC                                        <  SRR4302540.8401415/94‑1 (MQ=60)

                                                       ACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGAC                                        <  SRR4302540.5687257/94‑1 (MQ=60)

                                                       ACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGAC                                        >  SRR4302540.4287682/1‑94 (MQ=60)

                                                        CTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTGACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACG                                       >  SRR4302540.9017889/1‑94 (MQ=60)

                                                        CTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACG                                       <  SRR4302540.2200223/94‑1 (MQ=60)

                                                        CTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACG                                       <  SRR4302540.7084679/94‑1 (MQ=60)

                                                         TCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATACGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGG                                      <  SRR4302540.9042415/94‑1 (MQ=60)

                                                          CCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGACAGACGGT                                     >  SRR4302540.2809934/1‑94 (MQ=60)

                                                          CCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATGCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGT                                     <  SRR4302540.2721802/94‑1 (MQ=60)

                                                           CATTACGGTTTGTTGTGCTATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTT                                    <  SRR4302540.4732939/94‑1 (MQ=60)

                                                           CATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTT                                    <  SRR4302540.7584478/94‑1 (MQ=60)

                                                           CATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTT                                    >  SRR4302540.3995222/1‑94 (MQ=60)

                                                           CATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTT                                    <  SRR4302540.7092861/94‑1 (MQ=60)

                                                           CATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTT                                    <  SRR4302540.2378118/94‑1 (MQ=60)

                                                           CATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTT                                    <  SRR4302540.4807978/94‑1 (MQ=60)

                                                           CATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGAATTCATCACAGCAAACGTTTCGGAAAGACGGTT                                    >  SRR4302540.8649211/1‑94 (MQ=60)

                                                            ATTTCGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTC                                   >  SRR4302540.4418593/1‑94 (MQ=60)

                                                            ATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAGCGTTTCGGAAAGACGGTTC                                   <  SRR4302540.2201306/94‑1 (MQ=60)

                                                            ATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAGCGTTTCGGAAAGACGGTTC                                   <  SRR4302540.10040984/94‑1 (MQ=60)

                                                            ATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTC                                   <  SRR4302540.2201309/94‑1 (MQ=60)

                                                            ATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTC                                   <  SRR4302540.2586233/94‑1 (MQ=60)

                                                            ATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTC                                   >  SRR4302540.6917967/1‑94 (MQ=60)

                                                            ATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTC                                   <  SRR4302540.423244/94‑1 (MQ=60)

                                                             TTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCG                                  <  SRR4302540.1767631/94‑1 (MQ=60)

                                                             TTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCG                                  <  SRR4302540.4645201/94‑1 (MQ=60)

                                                              TACGGTTTGTTGTGCGATATTTTTGCCCATTGACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGC                                 >  SRR4302540.257534/1‑94 (MQ=60)

                                                              TACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGC                                 >  SRR4302540.2546285/1‑94 (MQ=60)

                                                              TACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGC                                 <  SRR4302540.8648355/94‑1 (MQ=60)

                                                              TACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGC                                 >  SRR4302540.1731056/1‑94 (MQ=60)

                                                              TACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGC                                 >  SRR4302540.6505477/1‑94 (MQ=60)

                                                               ACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCC                                >  SRR4302540.1411142/1‑94 (MQ=60)

                                                                CGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCA                               >  SRR4302540.1025564/1‑94 (MQ=60)

                                                                CGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCA                               >  SRR4302540.3687245/1‑94 (MQ=60)

                                                                 GGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAG                              >  SRR4302540.7331378/1‑94 (MQ=60)

                                                                 GGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAG                              <  SRR4302540.8139/94‑1 (MQ=60)

                                                                  GTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGGTCGCCAGT                             >  SRR4302540.2939847/1‑94 (MQ=60)

                                                                   TTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGAT                            >  SRR4302540.2618706/1‑94 (MQ=60)

                                                                    TTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACAGTTCGCCAGATT                           <  SRR4302540.3012609/94‑1 (MQ=60)

                                                                    TTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCAGAAAGACGGTTCGCCAGATT                           <  SRR4302540.9855889/94‑1 (MQ=60)

                                                                    TTGTTGTGCGATATTTTTGACCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATT                           <  SRR4302540.1685174/94‑1 (MQ=60)

                                                                     TGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTA                          >  SRR4302540.1861236/1‑94 (MQ=60)

                                                                       TTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAAC                        <  SRR4302540.2300583/94‑1 (MQ=60)

                                                                       TTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAAC                        <  SRR4302540.929475/94‑1 (MQ=60)

                                                                        TGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACG                       <  SRR4302540.4660510/94‑1 (MQ=60)

                                                                         GTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGC                      <  SRR4302540.1058056/94‑1 (MQ=60)

                                                                         GTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGC                      >  SRR4302540.5843281/1‑94 (MQ=60)

                                                                            CGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCAC                   <  SRR4302540.6666195/94‑1 (MQ=60)

                                                                             GATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACC                  >  SRR4302540.1305406/1‑94 (MQ=60)

                                                                             GATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCAACC                  >  SRR4302540.3644971/1‑94 (MQ=60)

                                                                             GATATTTTTGCCCATTAACATAAGAATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTAGGAAAGCCGGTTCGCCAGATTAAggcgaac                  >  SRR4302540.3644970/1‑87 (MQ=60)

                                                                              ATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCC                 <  SRR4302540.9860725/94‑1 (MQ=60)

                                                                              ATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCC                 <  SRR4302540.9860726/94‑1 (MQ=60)

                                                                              ATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCC                 >  SRR4302540.2349582/1‑94 (MQ=60)

                                                                                 TTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAGCGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGAC              <  SRR4302540.7142927/94‑1 (MQ=60)

                                                                                     TGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGG          >  SRR4302540.9012675/1‑94 (MQ=60)

                                                                                     TGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGG          >  SRR4302540.9012676/1‑94 (MQ=60)

                                                                                     TGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGG          <  SRR4302540.193403/94‑1 (MQ=60)

                                                                                       CCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCG        <  SRR4302540.7281263/94‑1 (MQ=60)

                                                                                       CCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTGCGGAAAGACGGTTCGCCAGATTAACGCCCCCCGACCAGGCG        <  SRR4302540.1902282/94‑1 (MQ=60)

                                                                                        CCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGC       >  SRR4302540.7049833/1‑94 (MQ=60)

                                                                                         CATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGAC      <  SRR4302540.10054978/94‑1 (MQ=60)

                                                                                         CATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGAC      >  SRR4302540.6607970/1‑94 (MQ=60)

                                                                                         CATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGAC      <  SRR4302540.4835362/94‑1 (MQ=60)

                                                                                          ATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACA     >  SRR4302540.8034644/1‑94 (MQ=60)

                                                                                          ATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACA     <  SRR4302540.1702298/94‑1 (MQ=60)

                                                                                          ATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGACTCGGAAAGACAGTTCGCCAGATTAACACCACCCGACCAGACGACA     >  SRR4302540.342283/1‑94 (MQ=60)

                                                                                           TTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACAA    >  SRR4302540.3245868/1‑94 (MQ=60)

                                                                                           TTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACAA    <  SRR4302540.2056733/94‑1 (MQ=60)

                                                                                           TTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACAA    <  SRR4302540.8115034/94‑1 (MQ=60)

                                                                                            TAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACAAT   <  SRR4302540.3771871/94‑1 (MQ=60)

                                                                                            TAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACAAT   <  SRR4302540.4194175/94‑1 (MQ=60)

                                                                                            TAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACAAT   <  SRR4302540.4716047/94‑1 (MQ=60)

                                                                                            TAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACAAT   <  SRR4302540.6868150/94‑1 (MQ=60)

                                                                                            TAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACAAT   <  SRR4302540.6875401/94‑1 (MQ=60)

                                                                                             AACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACAATG  >  SRR4302540.2145860/1‑94 (MQ=60)

CACATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTGACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACAATG  >  NC_000913/2186786‑2186972

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`