Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,186,879 |
G→A |
V684V (GTC→GTT) |
yehB ← |
putative outer membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,186,879 | 0 | G | A | 100.0%
| 824.7
/ NA
| 220 | V684V (GTC→GTT) | yehB | putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (88/132); total (88/132) |
Only 100 of 224 total aligned reads displayed.
ATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTGACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGAC > NC_000913/2186789‑2186968
|
ccAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACAt > 1:907510/1‑93 (MQ=255)
cAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATa < 2:2139380/93‑1 (MQ=255)
cAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATa > 2:2326297/1‑93 (MQ=255)
aGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATaa < 2:299308/93‑1 (MQ=255)
cATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGc < 1:1729390/93‑1 (MQ=255)
aTCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCa < 2:5352540/93‑1 (MQ=255)
tCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCAt > 1:1810997/1‑93 (MQ=255)
tCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCAt < 1:1972915/93‑1 (MQ=255)
cAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATc < 1:2214012/93‑1 (MQ=255)
ggTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCGCATTAACATAAGCATCtt > 1:1186986/1‑93 (MQ=255)
gTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCttt < 1:3542228/93‑1 (MQ=255)
tGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTa < 1:1346157/93‑1 (MQ=255)
gATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTaa < 1:6044873/93‑1 (MQ=255)
gATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTaa > 1:414306/1‑93 (MQ=255)
aTTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAAt < 1:4623848/93‑1 (MQ=255)
ttttCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAAtt < 1:1025422/93‑1 (MQ=255)
cccGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTg < 1:2592819/93‑1 (MQ=255)
cccGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTg < 2:5250318/93‑1 (MQ=255)
ccGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTgg < 1:2964167/93‑1 (MQ=255)
ccGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTgg < 1:3828988/93‑1 (MQ=255)
cGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGgc < 1:5496700/93‑1 (MQ=255)
gATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGgcg > 2:274523/1‑93 (MQ=255)
gATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGgcg > 1:454318/1‑93 (MQ=255)
gATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGgcg > 1:2093177/1‑93 (MQ=255)
gATAAGGTGTCATTCCGTCGTATATCACCACTCCATCACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGgcg < 1:5376980/93‑1 (MQ=255)
aTAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGgcgc < 2:3621942/93‑1 (MQ=255)
tAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCa < 1:1476216/93‑1 (MQ=255)
aGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCAtt < 1:5619134/93‑1 (MQ=255)
aGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCAtt > 1:3857749/1‑93 (MQ=255)
aGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCAtt > 1:4846238/1‑93 (MQ=255)
gtgtCATTCCGTCGTATATCACCACTGCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATtca < 2:5089665/93‑1 (MQ=255)
gtCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATtcatc < 1:4283629/93‑1 (MQ=255)
tCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATtcatca > 1:5796866/1‑93 (MQ=255)
tCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATtcatca < 2:1147267/93‑1 (MQ=255)
tCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATtcatca < 2:1172314/93‑1 (MQ=255)
cATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATcac < 1:4414989/93‑1 (MQ=255)
cATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATcac < 1:2683049/93‑1 (MQ=255)
aTTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATcaca > 1:5903380/1‑93 (MQ=255)
aTTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATcaca < 2:1291932/93‑1 (MQ=255)
aTTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATcaca > 2:3245175/1‑93 (MQ=255)
ttCCGTCGTATATGACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAg > 2:6305899/1‑93 (MQ=255)
ttCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAg < 1:753028/93‑1 (MQ=255)
tCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGc < 2:4546053/93‑1 (MQ=255)
tCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGc > 1:4744540/1‑93 (MQ=255)
cgtcgtATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCaa > 2:1560390/1‑93 (MQ=255)
gtcgtATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCaaa < 2:3403167/93‑1 (MQ=255)
gtcgtATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCaaa < 2:5587865/93‑1 (MQ=255)
gtcgtATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCaaa < 2:1265640/93‑1 (MQ=255)
tcgtATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAAc > 1:5998012/1‑93 (MQ=255)
cgtATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACg > 1:928051/1‑93 (MQ=255)
cgtATATCACCACTCCATTACGGGTTGTTGTGCGGTATTTTTGACCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAACAATCg > 2:6166361/1‑93 (MQ=255)
gtATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGt > 1:5689416/1‑93 (MQ=255)
gtATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGt > 2:5295925/1‑93 (MQ=255)
tataTCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGtt < 2:5392279/93‑1 (MQ=255)
tataTCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGtt < 1:5088007/93‑1 (MQ=255)
tataTCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGtt > 2:1493556/1‑93 (MQ=255)
atCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCg > 1:3727383/1‑93 (MQ=255)
atCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCg < 1:2824527/93‑1 (MQ=255)
caccacTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGa < 1:2533296/93‑1 (MQ=255)
caccacTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGa < 1:1220410/93‑1 (MQ=255)
ccacTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGaaa > 2:5117988/1‑93 (MQ=255)
cacTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAg > 1:3778279/1‑93 (MQ=255)
acTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGa < 2:477826/93‑1 (MQ=255)
cTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGAc < 2:2595425/93‑1 (MQ=255)
tCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGaag > 2:2445452/1‑91 (MQ=255)
tCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACg > 2:1632260/1‑93 (MQ=255)
tCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACg > 2:3687558/1‑93 (MQ=255)
tCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACg < 2:3792259/93‑1 (MQ=255)
tCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACg > 1:1611916/1‑93 (MQ=255)
tCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACg > 2:2204110/1‑93 (MQ=255)
tCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACg > 1:3081712/1‑93 (MQ=255)
tCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACg > 2:1834148/1‑93 (MQ=255)
ccATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACgg < 1:3462798/93‑1 (MQ=255)
ccATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACgg > 1:4518147/1‑93 (MQ=255)
cATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGt < 2:787936/93‑1 (MQ=255)
aTTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGtt > 1:3977910/1‑93 (MQ=255)
ttACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTc < 1:3148783/93‑1 (MQ=255)
ttACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTc < 2:5832492/93‑1 (MQ=255)
aCGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGc > 2:622640/1‑93 (MQ=255)
aCGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGc > 1:2143992/1‑93 (MQ=255)
ccgTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGACGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGcc > 2:3296190/3‑93 (MQ=255)
ttgtGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTaa < 1:2750318/93‑1 (MQ=255)
ttgtGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTaa < 2:4365861/93‑1 (MQ=255)
tgtgCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAAc < 2:4886289/93‑1 (MQ=255)
gCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGcc < 1:863645/93‑1 (MQ=255)
cGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCa < 1:4998433/93‑1 (MQ=255)
gATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCAc < 2:5934687/93‑1 (MQ=255)
atatTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCAcc > 1:757060/1‑93 (MQ=255)
tttttGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGa > 1:2996656/1‑93 (MQ=255)
ttttGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGAc < 2:388391/93‑1 (MQ=255)
ttGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGTAAAGACGGTTCGCCAGATTAACGCCGCCCGACCa < 2:4174228/93‑1 (MQ=255)
ttGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCa < 1:2033901/93‑1 (MQ=255)
ttGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCa < 2:1590957/93‑1 (MQ=255)
ttGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCa < 2:5623992/93‑1 (MQ=255)
ttGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGGTCGCCAGATTAACGCCACCCGACCa > 1:4490729/1‑93 (MQ=255)
gCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCCCCCGACCAgg < 2:3523108/93‑1 (MQ=255)
cccATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGc > 1:3735400/1‑93 (MQ=255)
cATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGa > 2:4941939/1‑93 (MQ=255)
cATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGa > 2:4595831/1‑93 (MQ=255)
aTTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGAc < 1:2926565/93‑1 (MQ=255)
|
ATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTGACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGAC > NC_000913/2186789‑2186968
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CACATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTGACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACAATG > NC_000913/2186786‑2186972
|
CACATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTA > SRR4302533.5610717/1‑94 (MQ=60)
ACATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAA > SRR4302533.2975897/1‑94 (MQ=60)
CATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAAC < SRR4302533.2728004/94‑1 (MQ=60)
CATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAAC < SRR4302533.1182775/94‑1 (MQ=60)
CATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAAC < SRR4302533.3955986/94‑1 (MQ=60)
ATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACA < SRR4302533.386190/94‑1 (MQ=60)
ATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACA < SRR4302533.4561422/94‑1 (MQ=60)
TCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACAT > SRR4302533.912832/1‑94 (MQ=60)
TCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACAT < SRR4302533.2581702/94‑1 (MQ=60)
CCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATA < SRR4302533.2841825/94‑1 (MQ=60)
GCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGC < SRR4302533.5671707/94‑1 (MQ=60)
CATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCA < SRR4302533.1739875/94‑1 (MQ=60)
CATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCA < SRR4302533.3770939/94‑1 (MQ=60)
ATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCAT > SRR4302533.1822061/1‑94 (MQ=60)
TCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATC < SRR4302533.1984991/94‑1 (MQ=60)
CAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCT < SRR4302533.2227671/94‑1 (MQ=60)
CAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCT > SRR4302533.1986347/1‑94 (MQ=60)
AGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCGCATTAACATAAGCATCTT > SRR4302533.1194109/1‑94 (MQ=60)
GGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTT < SRR4302533.4584861/94‑1 (MQ=60)
GTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTA < SRR4302533.3564059/94‑1 (MQ=60)
GTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTA > SRR4302533.6072993/1‑94 (MQ=60)
GTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTA > SRR4302533.1702646/1‑94 (MQ=60)
TGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAA < SRR4302533.1354257/94‑1 (MQ=60)
TGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAA > SRR4302533.3335165/1‑94 (MQ=60)
TGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAA > SRR4302533.416793/1‑94 (MQ=60)
GATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAAT < SRR4302533.157626/94‑1 (MQ=60)
GATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAAT < SRR4302533.6081492/94‑1 (MQ=60)
ATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATT < SRR4302533.4651875/94‑1 (MQ=60)
TTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTC < SRR4302533.1031448/94‑1 (MQ=60)
TTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCT < SRR4302533.4949861/94‑1 (MQ=60)
TCCCGATAAGGTGTCATTCCGTCTTGTATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTG > SRR4302533.4756347/1‑94 (MQ=60)
CCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGG < SRR4302533.2608752/94‑1 (MQ=60)
CCCGAAAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGGTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGG < SRR4302533.2306325/94‑1 (MQ=60)
CCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGC < SRR4302533.2982287/94‑1 (MQ=60)
CCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGC < SRR4302533.2954403/94‑1 (MQ=60)
CCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGC < SRR4302533.3852400/94‑1 (MQ=60)
CCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGC < SRR4302533.1138420/94‑1 (MQ=60)
CGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCG > SRR4302533.3835477/1‑94 (MQ=60)
CGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCG < SRR4302533.5529853/94‑1 (MQ=60)
CGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCG > SRR4302533.2106069/1‑94 (MQ=60)
CGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCG > SRR4302533.457033/1‑94 (MQ=60)
GATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGC > SRR4302533.281973/1‑94 (MQ=60)
GATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGC < SRR4302533.599726/94‑1 (MQ=60)
GATAAGGTGTCATTCCGTCGTATATCACCACTCCATCACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGC < SRR4302533.5409295/94‑1 (MQ=60)
ATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCA > SRR4302533.2655568/1‑94 (MQ=60)
TAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCAT < SRR4302533.1485142/94‑1 (MQ=60)
TAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCAT < SRR4302533.3094768/94‑1 (MQ=60)
AAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATT > SRR4302533.4069368/1‑94 (MQ=60)
AAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATT > SRR4302533.3881305/1‑94 (MQ=60)
AAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATT > SRR4302533.4875608/1‑94 (MQ=60)
AGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTC < SRR4302533.5653096/94‑1 (MQ=60)
GTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCAT < SRR4302533.92753/94‑1 (MQ=60)
TGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATC < SRR4302533.3907852/94‑1 (MQ=60)
TGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATC < SRR4302533.3732466/94‑1 (MQ=60)
GTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCA > SRR4302533.5831889/1‑94 (MQ=60)
GTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCA < SRR4302533.4309371/94‑1 (MQ=60)
GTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCA < SRR4302533.81052/94‑1 (MQ=60)
CATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACA > SRR4302533.388416/1‑94 (MQ=60)
CATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACA < SRR4302533.2699486/94‑1 (MQ=60)
CATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACA < SRR4302533.4441648/94‑1 (MQ=60)
CATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACA > SRR4302533.5939030/1‑94 (MQ=60)
ATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAG > SRR4302533.4399804/1‑94 (MQ=60)
TTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGC < SRR4302533.757465/94‑1 (MQ=60)
TTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGC < SRR4302533.5490294/94‑1 (MQ=60)
TTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGC > SRR4302533.4773305/1‑94 (MQ=60)
CCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCGTTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAA < SRR4302533.4457917/94‑1 (MQ=60)
GTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAAC > SRR4302533.6034339/1‑94 (MQ=60)
GTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAAC > SRR4302533.3614007/1‑94 (MQ=60)
GTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAAC > SRR4302533.5620301/1‑94 (MQ=60)
TCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACG > SRR4302533.933501/1‑94 (MQ=60)
CGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGT > SRR4302533.4485668/1‑94 (MQ=60)
CGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGT > SRR4302533.5723780/1‑94 (MQ=60)
GTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTT < SRR4302533.4531432/94‑1 (MQ=60)
TATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTT < SRR4302533.5118751/94‑1 (MQ=60)
ATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTC > SRR4302533.633928/1‑94 (MQ=60)
ATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTC < SRR4302533.5826052/94‑1 (MQ=60)
TATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCG < SRR4302533.4203340/94‑1 (MQ=60)
TATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCG > SRR4302533.3750247/1‑94 (MQ=60)
TATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCG < SRR4302533.1454616/94‑1 (MQ=60)
ATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGG < SRR4302533.2841908/94‑1 (MQ=60)
ATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGG < SRR4302533.2841909/94‑1 (MQ=60)
ATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGG < SRR4302533.3002676/94‑1 (MQ=60)
CACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAA < SRR4302533.2548890/94‑1 (MQ=60)
CACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAA < SRR4302533.5341563/94‑1 (MQ=60)
CACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAA < SRR4302533.758963/94‑1 (MQ=60)
CACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAA < SRR4302533.1227736/94‑1 (MQ=60)
CCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAG > SRR4302533.3801428/1‑94 (MQ=60)
CACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGA < SRR4302533.353800/94‑1 (MQ=60)
ACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGAC < SRR4302533.2101139/94‑1 (MQ=60)
CTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACG > SRR4302533.1621690/1‑94 (MQ=60)
CTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACG < SRR4302533.3061477/94‑1 (MQ=60)
CTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACG > SRR4302533.3100619/1‑94 (MQ=60)
TCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGG > SRR4302533.4545509/1‑94 (MQ=60)
TCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGG < SRR4302533.195646/94‑1 (MQ=60)
CCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGT < SRR4302533.3756166/94‑1 (MQ=60)
CCATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGT < SRR4302533.3484173/94‑1 (MQ=60)
CATTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTT > SRR4302533.4002128/1‑94 (MQ=60)
TTACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCG < SRR4302533.3168141/94‑1 (MQ=60)
TACGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGC > SRR4302533.2157201/1‑94 (MQ=60)
TCGGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCC < SRR4302533.5280074/94‑1 (MQ=60)
GGTTTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAG < SRR4302533.2046199/94‑1 (MQ=60)
TTGTTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATT < SRR4302533.2154296/94‑1 (MQ=60)
TTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAAC < SRR4302533.125235/94‑1 (MQ=60)
TTGTGCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAAC < SRR4302533.2767177/94‑1 (MQ=60)
GCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCA > SRR4302533.2494752/1‑94 (MQ=60)
GCGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCA < SRR4302533.868705/94‑1 (MQ=60)
CGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCAC > SRR4302533.1201305/1‑94 (MQ=60)
CGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCAC > SRR4302533.3145965/1‑94 (MQ=60)
CGATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCAC < SRR4302533.5028737/94‑1 (MQ=60)
GATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACC > SRR4302533.761514/1‑94 (MQ=60)
ATATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCC > SRR4302533.2711969/1‑94 (MQ=60)
ATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGA > SRR4302533.3014979/1‑94 (MQ=60)
ATTTTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGA > SRR4302533.1798824/1‑94 (MQ=60)
TTTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGGTCGCCAGATTAACGCCACCCGACCA > SRR4302533.4517927/1‑94 (MQ=60)
TTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAG < SRR4302533.2046447/94‑1 (MQ=60)
TTGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAG < SRR4302533.4825687/94‑1 (MQ=60)
TGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGG > SRR4302533.5793033/1‑94 (MQ=60)
TGCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGG < SRR4302533.4714175/94‑1 (MQ=60)
TCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGC < SRR4302533.1518528/94‑1 (MQ=60)
GCCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGC > SRR4302533.3758317/1‑94 (MQ=60)
CCCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAACCGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCG < SRR4302533.50755/94‑1 (MQ=60)
CCATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGA > SRR4302533.620571/1‑94 (MQ=60)
CATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGAC > SRR4302533.5917821/1‑94 (MQ=60)
CATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGAC > SRR4302533.2185830/1‑94 (MQ=60)
ATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACA < SRR4302533.876689/94‑1 (MQ=60)
ATTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACA < SRR4302533.2944469/94‑1 (MQ=60)
TTAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACAA < SRR4302533.1180213/94‑1 (MQ=60)
TAACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACAAT < SRR4302533.2638459/94‑1 (MQ=60)
AACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACAATG < SRR4302533.1913025/94‑1 (MQ=60)
AACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACAATG > SRR4302533.3374337/1‑94 (MQ=60)
|
CACATCCAGCATCAGGTGATTTTCCCGATAAGGTGTCATTCCGTCGTATATCACCACTCCATTACGGTTTGTTGTGCGATATTTTTGCCCATTGACATAAGCATCTTTAATTCCTGGCGCATTCATCACAGCAAACGTTTCGGAAAGACGGTTCGCCAGATTAACGCCACCCGACCAGGCGACAATG > NC_000913/2186786‑2186972
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
