Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,210,781 |
T→C |
M68V (ATG→GTG) |
b2125 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,210,781 | 0 | T | C | 99.7%
| 963.5
/ ‑5.0
| 298 | M68V (ATG→GTG) | b2125 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (161/136); total (161/137) |
| Fisher's exact test for biased strand distribution p-value = 4.60e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.19e-01 |
Only 100 of 311 total aligned reads displayed.
AATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCT > NC_000913/2210691‑2210869
|
aTCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCAcccc > 1:5166533/1‑93 (MQ=255)
tCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACcccc > 2:2880881/1‑93 (MQ=255)
aaaGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGCTGTTCTGGGTCAAGCACCCccac > 2:4259072/1‑93 (MQ=255)
aaaGGCATGTTCTTCAAAGGCTTAAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCCCCCccac < 2:5532169/93‑1 (MQ=255)
aaGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCccacc > 1:2054131/1‑93 (MQ=255)
aaGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCccacc > 2:2209128/1‑93 (MQ=255)
aGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCccacca > 1:7075148/1‑93 (MQ=255)
aGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCccacca < 2:7148837/93‑1 (MQ=255)
aGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCccacca < 2:1842992/93‑1 (MQ=255)
agCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCAt < 1:8159628/92‑1 (MQ=255)
gCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCAtt < 2:916469/93‑1 (MQ=255)
aTGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTc > 2:8876800/1‑93 (MQ=255)
tGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTcc < 2:6977568/93‑1 (MQ=255)
tGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTcc < 1:5821256/93‑1 (MQ=255)
gTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCa < 1:2218649/93‑1 (MQ=255)
gTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCa < 1:9912377/93‑1 (MQ=255)
gTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCa > 2:2955394/1‑93 (MQ=255)
tcttcAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGa > 1:2738305/1‑93 (MQ=255)
cttcAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGAc < 1:8670292/93‑1 (MQ=255)
tcAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCa < 1:4829891/93‑1 (MQ=255)
cAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCAc > 1:4448479/1‑93 (MQ=255)
cAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCAc > 1:2368738/1‑93 (MQ=255)
cAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCAc > 1:5435027/1‑93 (MQ=255)
cAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCAc > 2:5868659/1‑93 (MQ=255)
cAAAGGCTTGAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCCCCCCCACCATTTCCAGACCAc < 1:5661642/93‑1 (MQ=255)
aaGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTg > 2:8444928/1‑93 (MQ=255)
aaGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTg > 2:4679434/1‑93 (MQ=255)
aaGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTg > 2:4081177/1‑93 (MQ=255)
aGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGa < 2:3396023/93‑1 (MQ=255)
aGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGa < 1:6402559/93‑1 (MQ=255)
aGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGa > 1:2116805/1‑93 (MQ=255)
aGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGa > 2:8129211/1‑93 (MQ=255)
aGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGa < 2:8623246/93‑1 (MQ=255)
ggCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAt > 2:7433887/1‑93 (MQ=255)
ggCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAt < 2:3043692/93‑1 (MQ=255)
gCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATg < 2:8531310/93‑1 (MQ=255)
cTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgc < 2:6308698/93‑1 (MQ=255)
cTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgc < 2:3673407/93‑1 (MQ=255)
atttAATTGGGTATTGGTCAAACGCAGTGAGAAAAACAATATGCGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgc < 2:781396/92‑1 (MQ=255)
tttAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgcg > 1:6225746/1‑93 (MQ=255)
tttAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgcg > 2:10034856/1‑93 (MQ=255)
tttAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgcg > 2:6527824/1‑93 (MQ=255)
ttAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgcgc > 2:1239831/1‑93 (MQ=255)
ttAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgcgc > 2:6674085/1‑93 (MQ=255)
ttGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCa > 1:30346/1‑93 (MQ=255)
tGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCAt > 2:7478417/1‑93 (MQ=255)
gCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATc < 1:8366098/93‑1 (MQ=255)
gCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATc < 1:3822110/93‑1 (MQ=255)
gTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTg > 2:6933601/1‑93 (MQ=255)
tATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTgg > 2:5798968/1‑93 (MQ=255)
aTTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGa < 1:384312/93‑1 (MQ=255)
ttCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGat < 2:541521/93‑1 (MQ=255)
ttCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGat > 2:962666/1‑93 (MQ=255)
ttCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGat < 2:2818735/93‑1 (MQ=255)
tCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGata < 1:10012810/93‑1 (MQ=255)
tCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCg < 1:7485012/93‑1 (MQ=255)
cGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGaaa > 1:7190693/1‑93 (MQ=255)
cGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGaaa < 2:8735537/93‑1 (MQ=255)
gCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAAc < 1:777776/93‑1 (MQ=255)
acAGTGAGAAAAACAATATACGGGCGCTTTTCCCGGTCAAGCCCCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAAc < 1:1566134/92‑1 (MQ=255)
aGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAg > 1:8560681/1‑93 (MQ=255)
tGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGca > 2:7958033/1‑93 (MQ=255)
tGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGca > 2:5062338/1‑93 (MQ=255)
gagaAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGcac < 2:449035/93‑1 (MQ=255)
gaAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACAt < 2:4563163/93‑1 (MQ=255)
aaaaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATcc > 1:6080013/1‑93 (MQ=255)
aaaaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATcc < 1:2616175/93‑1 (MQ=255)
aaaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCg > 1:5863484/1‑93 (MQ=255)
aaaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCg < 1:337692/93‑1 (MQ=255)
aaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCgg < 2:6139484/93‑1 (MQ=255)
aaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCgg < 1:1173185/93‑1 (MQ=255)
aaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCgg > 1:1680965/1‑93 (MQ=255)
aaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCgg < 1:407628/93‑1 (MQ=255)
aCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCggg < 2:4374873/93‑1 (MQ=255)
aaTATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGgcg < 2:9123143/93‑1 (MQ=255)
atatACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGgcgc > 1:9983065/1‑93 (MQ=255)
atatACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGgcgc > 1:8986579/1‑93 (MQ=255)
tataCGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCa > 2:5271123/1‑93 (MQ=255)
tataCGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCa > 1:8232624/1‑93 (MQ=255)
tataCGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCa > 1:9280404/1‑93 (MQ=255)
taCGGGCGATGTTCCGGGTCAAGCCCCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGt < 1:8267237/93‑1 (MQ=255)
taCGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGt < 2:3933182/93‑1 (MQ=255)
taCGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGt > 2:3218352/1‑93 (MQ=255)
cGGGCGATGTTCCGGGTCAAGCACCCCCACCATGTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGttt < 1:9704033/93‑1 (MQ=255)
gggCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTa < 1:8743954/93‑1 (MQ=255)
gggCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTa > 1:5052806/1‑93 (MQ=255)
ggCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTAt > 1:1783293/1‑93 (MQ=255)
ggCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTAt < 2:2283701/93‑1 (MQ=255)
gCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATg > 2:9393941/1‑93 (MQ=255)
gATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCa < 1:8837087/93‑1 (MQ=255)
gATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCa > 2:1799495/1‑93 (MQ=255)
aTGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAc < 1:7283774/93‑1 (MQ=255)
tGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAcc < 1:5958695/93‑1 (MQ=255)
tGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAcc < 1:3311890/93‑1 (MQ=255)
ttCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACcgc > 1:4632942/1‑93 (MQ=255)
ttCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACcgc < 1:9144183/93‑1 (MQ=255)
ccGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCgcgc > 1:2834144/1‑93 (MQ=255)
gggTCAAGAACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACTGCGCCg > 1:6489748/1‑93 (MQ=255)
gTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGAt > 1:7909295/1‑93 (MQ=255)
tCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATc < 1:9577251/93‑1 (MQ=255)
|
AATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCT > NC_000913/2210691‑2210869
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCAC > NC_000913/2210688‑2210874
|
GATAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCAC < SRR4302540.2623932/94‑1 (MQ=60)
GATAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCAC > SRR4302540.9183587/1‑94 (MQ=60)
GATAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCAC > SRR4302540.1954279/1‑94 (MQ=60)
ATAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACC > SRR4302540.4715967/1‑94 (MQ=60)
ATAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACC < SRR4302540.9467036/94‑1 (MQ=60)
ATAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACC < SRR4302540.1519309/94‑1 (MQ=60)
AATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCACGCACCCC > SRR4302540.3276132/1‑94 (MQ=60)
AATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCC > SRR4302540.5222724/1‑94 (MQ=60)
AATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCC > SRR4302540.1882795/1‑94 (MQ=60)
AATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCC > SRR4302540.8427479/1‑94 (MQ=60)
ATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGTGATGTTCCGGGTCAAGCACCCCC > SRR4302540.9762660/1‑94 (MQ=60)
ATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCC < SRR4302540.8193406/94‑1 (MQ=60)
CAAAGGCATGTTCTTCAAAGGATTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCAC > SRR4302540.7544171/1‑94 (MQ=60)
AAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACC > SRR4302540.2076242/1‑94 (MQ=60)
AAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACC > SRR4302540.3059108/1‑94 (MQ=60)
AAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCA > SRR4302540.3867403/1‑94 (MQ=60)
AAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCA > SRR4302540.7153879/1‑94 (MQ=60)
AGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCAT > SRR4302540.9179581/1‑94 (MQ=60)
AGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCAT > SRR4302540.2390122/1‑94 (MQ=60)
AGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATT < SRR4302540.8254374/94‑1 (MQ=60)
ATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCC > SRR4302540.8833445/1‑94 (MQ=60)
TGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCA > SRR4302540.8551911/1‑94 (MQ=60)
TGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCA > SRR4302540.8551910/1‑94 (MQ=60)
TGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCA < SRR4302540.5885598/94‑1 (MQ=60)
GTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAG < SRR4302540.10028152/94‑1 (MQ=60)
GTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAG < SRR4302540.9747595/94‑1 (MQ=60)
GTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAG < SRR4302540.2863474/94‑1 (MQ=60)
GTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAG > SRR4302540.9618563/1‑94 (MQ=60)
GTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAG < SRR4302540.2242575/94‑1 (MQ=60)
GTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAG > SRR4302540.6039930/1‑94 (MQ=60)
GGTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAG < SRR4302540.2117375/94‑1 (MQ=60)
TTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGC > SRR4302540.7907735/1‑94 (MQ=60)
TTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGA < SRR4302540.6108736/94‑1 (MQ=60)
TTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGA > SRR4302540.2767860/1‑94 (MQ=60)
TCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGAC > SRR4302540.9232357/1‑94 (MQ=60)
CTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACC > SRR4302540.4716368/1‑94 (MQ=60)
CTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACC < SRR4302540.8771004/94‑1 (MQ=60)
CTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACC < SRR4302540.8771005/94‑1 (MQ=60)
CTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACC < SRR4302540.4020240/94‑1 (MQ=60)
TCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCAC > SRR4302540.4496690/1‑94 (MQ=60)
TCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCAC < SRR4302540.4881619/94‑1 (MQ=60)
TCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCAC > SRR4302540.5494805/1‑94 (MQ=60)
TCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCAC > SRR4302540.2394245/1‑94 (MQ=60)
CAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACT < SRR4302540.5723985/94‑1 (MQ=60)
CAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACT < SRR4302540.9021047/94‑1 (MQ=60)
CAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACT < SRR4302540.5723983/94‑1 (MQ=60)
CAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACT > SRR4302540.2810821/1‑94 (MQ=60)
CAAAGGCTTGAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCCCCCCCACCATTTCCAGACCACT < SRR4302540.5723984/94‑1 (MQ=60)
AAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTG > SRR4302540.9336961/1‑94 (MQ=60)
AAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTG > SRR4302540.2532729/1‑94 (MQ=60)
AAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTG > SRR4302540.8330014/1‑94 (MQ=60)
AAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCCCCATTTCCAGACCACTGA < SRR4302540.2657604/94‑1 (MQ=60)
AAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGA < SRR4302540.2657603/94‑1 (MQ=60)
AAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGA > SRR4302540.2139521/1‑94 (MQ=60)
AGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAT > SRR4302540.5299333/1‑94 (MQ=60)
AGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAT > SRR4302540.4668665/1‑94 (MQ=60)
AGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAT < SRR4302540.6473828/94‑1 (MQ=60)
AGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAT < SRR4302540.5753719/94‑1 (MQ=60)
GCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGC < SRR4302540.6169350/94‑1 (MQ=60)
GCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGC < SRR4302540.6169351/94‑1 (MQ=60)
CTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCG > SRR4302540.6294988/1‑94 (MQ=60)
CTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCG > SRR4302540.7340757/1‑94 (MQ=60)
CTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCC > SRR4302540.7850807/1‑94 (MQ=60)
TTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGC > SRR4302540.372391/1‑94 (MQ=60)
TTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGC > SRR4302540.4820877/1‑94 (MQ=60)
TTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGC > SRR4302540.8010540/1‑94 (MQ=60)
TTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCG > SRR4302540.6538449/1‑94 (MQ=60)
TTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCG < SRR4302540.8709330/94‑1 (MQ=60)
TTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCG > SRR4302540.6538191/1‑94 (MQ=60)
ATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGCTGCGCGGCC > SRR4302540.1721263/1‑94 (MQ=60)
ATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCA > SRR4302540.1721264/1‑94 (MQ=60)
ATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCA > SRR4302540.30670/1‑94 (MQ=60)
TTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCAT > SRR4302540.2357857/1‑94 (MQ=60)
GTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCAT < SRR4302540.6744670/94‑1 (MQ=60)
TGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATC > SRR4302540.4566911/1‑94 (MQ=60)
GCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCT < SRR4302540.3863709/94‑1 (MQ=60)
GCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCT < SRR4302540.8463180/94‑1 (MQ=60)
CGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTG > SRR4302540.895757/1‑94 (MQ=60)
CGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTG > SRR4302540.7509752/1‑94 (MQ=60)
TATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGA > SRR4302540.8354720/1‑94 (MQ=60)
ATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGAT < SRR4302540.388281/94‑1 (MQ=60)
ATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGAT < SRR4302540.388280/94‑1 (MQ=60)
TCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATAT < SRR4302540.3904103/94‑1 (MQ=60)
TCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATAT < SRR4302540.10129390/94‑1 (MQ=60)
TCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATAT < SRR4302540.1614335/94‑1 (MQ=60)
GTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCG > SRR4302540.7184951/1‑94 (MQ=60)
TCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGA < SRR4302540.5514744/94‑1 (MQ=60)
TCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGA < SRR4302540.7568562/94‑1 (MQ=60)
ACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAA < SRR4302540.3279128/94‑1 (MQ=60)
ACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAA > SRR4302540.7270842/1‑94 (MQ=60)
CGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAAC > SRR4302540.8836102/1‑94 (MQ=60)
GCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACA < SRR4302540.1393270/94‑1 (MQ=60)
GCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACA < SRR4302540.10049039/94‑1 (MQ=60)
GCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACA < SRR4302540.786070/94‑1 (MQ=60)
GCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACA < SRR4302540.2087142/94‑1 (MQ=60)
ACAGTGAGAAAAACAATATACGGGCGCTTTTCCCGGTCAAGCCCCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACA < SRR4302540.1583317/94‑1 (MQ=60)
CTGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATGTCCAGACCACTGATGCGCGGCATCTGGCTATCGAGAAACAC > SRR4302540.9062657/1‑94 (MQ=60)
CAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAG < SRR4302540.289992/94‑1 (MQ=60)
CAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAG > SRR4302540.8291827/1‑94 (MQ=60)
CAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAG > SRR4302540.8660108/1‑94 (MQ=60)
CAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAG > SRR4302540.270796/1‑94 (MQ=60)
AGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGC > SRR4302540.5180687/1‑94 (MQ=60)
AGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGC > SRR4302540.5142216/1‑94 (MQ=60)
GTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCA < SRR4302540.1078488/94‑1 (MQ=60)
GAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACA < SRR4302540.831172/94‑1 (MQ=60)
AGAAAAACAATATACGGGAGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACAT < SRR4302540.4589261/94‑1 (MQ=60)
GAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATC > SRR4302540.1154789/1‑94 (MQ=60)
AAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCC > SRR4302540.6951761/1‑94 (MQ=60)
AAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCC > SRR4302540.6147625/1‑94 (MQ=60)
AAAACAATATACGGGTGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCG > SRR4302540.7625855/1‑94 (MQ=60)
AAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCG < SRR4302540.2644441/94‑1 (MQ=60)
AAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCG > SRR4302540.5928314/1‑94 (MQ=60)
AAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCG < SRR4302540.8907068/94‑1 (MQ=60)
AAACAATATACGGGCGATGTTCCGGGTCAAGCGCCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGG < SRR4302540.2026782/94‑1 (MQ=60)
AAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGG > SRR4302540.1699211/1‑94 (MQ=60)
AAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGG < SRR4302540.341096/94‑1 (MQ=60)
AACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGG < SRR4302540.10006066/94‑1 (MQ=60)
AACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGG < SRR4302540.8900351/94‑1 (MQ=60)
AACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGG < SRR4302540.411891/94‑1 (MQ=60)
AACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGG < SRR4302540.1185322/94‑1 (MQ=60)
CAATATACGGGCGATGTTCTGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCG > SRR4302540.10050782/1‑94 (MQ=60)
AATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGC > SRR4302540.9093972/1‑94 (MQ=60)
AATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGC > SRR4302540.10099463/1‑94 (MQ=60)
AATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGC > SRR4302540.6355366/1‑94 (MQ=60)
ATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCA > SRR4302540.9391333/1‑94 (MQ=60)
ATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCA > SRR4302540.4410430/1‑94 (MQ=60)
ATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCA > SRR4302540.5384630/1‑94 (MQ=60)
ATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCA > SRR4302540.8328319/1‑94 (MQ=60)
ATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCA > SRR4302540.169340/1‑94 (MQ=60)
TATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAG < SRR4302540.9384434/94‑1 (MQ=60)
ATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGT > SRR4302540.9669715/1‑94 (MQ=60)
TACGGGCGATGTTCCGGGTCAAGCCCCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTT < SRR4302540.8363298/94‑1 (MQ=60)
TACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTT < SRR4302540.4916326/94‑1 (MQ=60)
TACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTT < SRR4302540.4916327/94‑1 (MQ=60)
ACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTT > SRR4302540.600369/1‑94 (MQ=60)
ACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTT > SRR4302540.600370/1‑94 (MQ=60)
CGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTA < SRR4302540.10101025/94‑1 (MQ=60)
CGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTA > SRR4302540.5107429/1‑94 (MQ=60)
CGGGCGATGTTCCGGGTCAAGCACCCCCACCATGTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTA < SRR4302540.9818102/94‑1 (MQ=60)
GGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTAT > SRR4302540.3351658/1‑94 (MQ=60)
GGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTAT > SRR4302540.1802667/1‑94 (MQ=60)
GGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTAT < SRR4302540.8845440/94‑1 (MQ=60)
CGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCA > SRR4302540.6318497/1‑94 (MQ=60)
GATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAC < SRR4302540.8939297/94‑1 (MQ=60)
GATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAC < SRR4302540.2186081/94‑1 (MQ=60)
GATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAC > SRR4302540.5895707/1‑94 (MQ=60)
GATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAC > SRR4302540.5895708/1‑94 (MQ=60)
GATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAC > SRR4302540.4304540/1‑94 (MQ=60)
ATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACC < SRR4302540.1389697/94‑1 (MQ=60)
ATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACC < SRR4302540.7365055/94‑1 (MQ=60)
TGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCG < SRR4302540.223351/94‑1 (MQ=60)
TGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCG < SRR4302540.3348178/94‑1 (MQ=60)
TGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCG < SRR4302540.6024598/94‑1 (MQ=60)
GTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGC > SRR4302540.4682557/1‑94 (MQ=60)
GTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGC < SRR4302540.6067405/94‑1 (MQ=60)
GTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGC > SRR4302540.7206228/1‑94 (MQ=60)
TTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCG < SRR4302540.9254025/94‑1 (MQ=60)
TCCCGGGGCAAGCACCCCCACCCTTTCCCGACCAGTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCG < SRR4302540.9254024/94‑1 (MQ=60)
TCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGC > SRR4302540.2864797/1‑94 (MQ=60)
CGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCG > SRR4302540.3369120/1‑94 (MQ=60)
CGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCG < SRR4302540.361484/94‑1 (MQ=60)
CGGGTCAAGAACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACTGCGCCG > SRR4302540.6561916/1‑94 (MQ=60)
GGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACCTCCGGGCGCAGTTCATGGACCGCGCCGA > SRR4302540.7938795/1‑94 (MQ=60)
GGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGA > SRR4302540.7938794/1‑94 (MQ=60)
GGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGAT > SRR4302540.8405544/1‑94 (MQ=60)
GGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGAT > SRR4302540.8001516/1‑94 (MQ=60)
TCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCC < SRR4302540.9690356/94‑1 (MQ=60)
TCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCC < SRR4302540.2528407/94‑1 (MQ=60)
TCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCC < SRR4302540.9966904/94‑1 (MQ=60)
CAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCC < SRR4302540.7291493/94‑1 (MQ=60)
CACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCC < SRR4302540.8357545/94‑1 (MQ=60)
CACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCC < SRR4302540.9430035/94‑1 (MQ=60)
ACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCA > SRR4302540.411932/1‑94 (MQ=60)
CCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCAC < SRR4302540.5397233/94‑1 (MQ=60)
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GATAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCAC > NC_000913/2210688‑2210874
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
