Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,210,781 |
T→C |
M68V (ATG→GTG) |
b2125 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,210,781 | 0 | T | C | 99.5%
| 647.5
/ NA
| 201 | M68V (ATG→GTG) | b2125 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (109/91); minor base A (1/0); total (110/91) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 209 total aligned reads displayed.
AATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCT > NC_000913/2210691‑2210869
|
aaTCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCAccc > 1:5032532/1‑93 (MQ=255)
aTCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCAcccc < 1:1065057/93‑1 (MQ=255)
tCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACcccc > 2:71644/1‑93 (MQ=255)
tCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACcccc > 2:1824636/1‑93 (MQ=255)
cAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCcca > 1:147505/1‑93 (MQ=255)
cAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCcca > 2:169252/1‑93 (MQ=255)
cAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCcca > 2:5310377/1‑93 (MQ=255)
aaaGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCccac > 1:4534564/1‑93 (MQ=255)
aaGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCccacc > 1:3166021/1‑93 (MQ=255)
cATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCAttt > 1:4043404/1‑93 (MQ=255)
aTGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTc > 1:5867088/1‑93 (MQ=255)
aTGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTc > 2:2803373/1‑93 (MQ=255)
aTGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTc > 2:4776143/1‑93 (MQ=255)
tGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTcc > 2:1134997/1‑93 (MQ=255)
tGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTcc > 1:29792/1‑93 (MQ=255)
tGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTcc > 1:1170956/1‑93 (MQ=255)
tttcttcAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCa < 2:4907961/92‑1 (MQ=255)
ttcttcAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAg < 2:662725/93‑1 (MQ=255)
cttcAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGAc > 2:2839732/1‑93 (MQ=255)
cttcAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGAc > 2:1428406/1‑93 (MQ=255)
cttcAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGAc > 2:3156316/1‑93 (MQ=255)
ttcAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGAcc > 2:1531442/1‑93 (MQ=255)
tcAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCa > 2:37044/1‑93 (MQ=255)
cAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTGAAGCACCCCCACCATTTCCAGACCAc > 2:5093075/1‑93 (MQ=255)
cAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCAc < 1:682994/93‑1 (MQ=255)
cAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCAc > 1:4573149/1‑93 (MQ=255)
aaaGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCAcc > 1:1790655/1‑92 (MQ=255)
aaaGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACt > 2:5439982/1‑93 (MQ=255)
aaaGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACt > 2:628341/1‑93 (MQ=255)
aaaGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACt < 2:801998/93‑1 (MQ=255)
aaaGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACt > 1:6263541/1‑93 (MQ=255)
aGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGa > 2:3440799/1‑93 (MQ=255)
ggCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAt > 1:1944983/1‑93 (MQ=255)
ggCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAt < 1:2753548/93‑1 (MQ=255)
gCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATg > 1:4242267/1‑93 (MQ=255)
cTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgc > 1:5166930/1‑93 (MQ=255)
cTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgc > 1:2685805/1‑93 (MQ=255)
cTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgc > 1:4051462/1‑93 (MQ=255)
ttAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgcgc > 2:381201/1‑93 (MQ=255)
tGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCAt > 1:2582943/1‑93 (MQ=255)
gCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATc > 2:3237503/1‑93 (MQ=255)
tATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTgg > 1:1136561/1‑93 (MQ=255)
tATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTgg > 1:1604687/1‑93 (MQ=255)
tATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTgg < 1:3587701/93‑1 (MQ=255)
aTTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGa < 2:5184905/93‑1 (MQ=255)
aTTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGa < 1:3036375/93‑1 (MQ=255)
ttCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGat < 2:2962216/93‑1 (MQ=255)
ttCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGat < 2:3942903/93‑1 (MQ=255)
ttCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGat > 2:4794237/1‑93 (MQ=255)
tCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGata < 1:4175176/93‑1 (MQ=255)
gTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATc > 1:1242497/1‑93 (MQ=255)
atCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATc < 1:3758794/92‑1 (MQ=255)
cAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCga > 2:6231277/1‑93 (MQ=255)
cAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCga < 2:2885203/93‑1 (MQ=255)
cAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTAGATATCga < 1:3841921/93‑1 (MQ=255)
gCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAAc < 2:5330278/93‑1 (MQ=255)
cAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACa < 1:2281469/93‑1 (MQ=255)
cAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACa < 2:5957628/93‑1 (MQ=255)
cAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACa < 2:3495700/93‑1 (MQ=255)
cAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACa < 2:243411/93‑1 (MQ=255)
cAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACa > 2:233850/1‑93 (MQ=255)
aGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAg > 2:5528751/1‑93 (MQ=255)
aGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAg > 1:1790688/1‑93 (MQ=255)
gTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGc > 2:4002383/1‑93 (MQ=255)
gTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGc > 1:3706888/1‑93 (MQ=255)
tGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGca > 1:4316810/1‑93 (MQ=255)
agaAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGcaca < 2:6200627/93‑1 (MQ=255)
gaAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACAt > 1:934735/1‑93 (MQ=255)
aaaaaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATc < 2:1265833/93‑1 (MQ=255)
aaaaaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATc < 2:4438950/93‑1 (MQ=255)
aaaaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATcc > 2:1760677/1‑93 (MQ=255)
atatACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCCGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGgcgc > 2:5778175/1‑93 (MQ=255)
atatACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGgcgc < 1:3931004/93‑1 (MQ=255)
atatACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGgcgc > 2:2175792/1‑93 (MQ=255)
tataCGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATACGGGCGCa > 2:5979672/1‑93 (MQ=255)
ataCGGGCGATGTTCCGGGCCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAACACATCCGGGCGCAg > 2:1898889/1‑93 (MQ=255)
taCGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGt > 2:1981313/1‑93 (MQ=255)
aCGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGtt < 1:3324593/93‑1 (MQ=255)
aCGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGtt < 1:1983845/93‑1 (MQ=255)
aCGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGtt < 1:5662071/93‑1 (MQ=255)
gggCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTa < 2:4573149/93‑1 (MQ=255)
gggCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTa > 2:487538/1‑93 (MQ=255)
gggCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTa > 1:336358/1‑93 (MQ=255)
gCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGCGAAACAGCACATCCGGGCGCAGTTTATg > 2:1481753/1‑93 (MQ=255)
cGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGc < 2:5858449/93‑1 (MQ=255)
cGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGc < 1:845392/93‑1 (MQ=255)
cGATATTCAGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGc < 1:1889443/93‑1 (MQ=255)
gATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCa > 2:3282194/1‑93 (MQ=255)
aTGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAc > 1:4802282/1‑93 (MQ=255)
tGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAcc < 2:2896763/93‑1 (MQ=255)
gTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACcg < 2:4727225/93‑1 (MQ=255)
cGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGcc > 1:5229346/1‑93 (MQ=255)
ggTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGa < 1:6099419/93‑1 (MQ=255)
gTCAAGCCGCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATAGAGAAACAGCACATCCGGGCGCAGTTTATGCTCCGCGCCGAt < 1:3390577/93‑1 (MQ=255)
gTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGAAGTTTATGCACCGCGCCGAt > 1:5323603/1‑93 (MQ=255)
tCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATc < 2:1073723/93‑1 (MQ=255)
aaGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATccc < 1:1431258/93‑1 (MQ=255)
aaGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATccc < 1:4350610/93‑1 (MQ=255)
aGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCt < 1:349408/93‑1 (MQ=255)
aGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCt < 2:4242645/93‑1 (MQ=255)
|
AATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCT > NC_000913/2210691‑2210869
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCAC > NC_000913/2210690‑2210874
|
TAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCC > SRR4302533.5063019/1‑94 (MQ=60)
TAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCC > SRR4302533.5063020/1‑94 (MQ=60)
AATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCC > SRR4302533.3075688/1‑94 (MQ=60)
ATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCC < SRR4302533.1071311/94‑1 (MQ=60)
TCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCA > SRR4302533.148449/1‑94 (MQ=60)
CAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCAC > SRR4302533.4562020/1‑94 (MQ=60)
AAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACC > SRR4302533.3185503/1‑94 (MQ=60)
AAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCA < SRR4302533.4206813/94‑1 (MQ=60)
AGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCAT < SRR4302533.1076431/94‑1 (MQ=60)
AGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGACCCCCCACCAT > SRR4302533.5212467/1‑94 (MQ=60)
GCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTT > SRR4302533.4068016/1‑94 (MQ=60)
CATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTC > SRR4302533.5902552/1‑94 (MQ=60)
ATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCC > SRR4302533.29994/1‑94 (MQ=60)
ATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCC < SRR4302533.4538628/94‑1 (MQ=60)
ATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCC > SRR4302533.1177986/1‑94 (MQ=60)
TTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGA > SRR4302533.1978866/1‑94 (MQ=60)
TCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGAC > SRR4302533.1202292/1‑94 (MQ=60)
TCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGAC > SRR4302533.2511519/1‑94 (MQ=60)
CTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACC > SRR4302533.1444237/1‑94 (MQ=60)
TCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCAC > SRR4302533.1874648/1‑94 (MQ=60)
TCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCAC > SRR4302533.4600863/1‑94 (MQ=60)
TCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCAC > SRR4302533.5086177/1‑94 (MQ=60)
CAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACT > SRR4302533.1801546/1‑94 (MQ=60)
CAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACT > SRR4302533.3558463/1‑94 (MQ=60)
CAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACT < SRR4302533.687033/94‑1 (MQ=60)
CAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACT > SRR4302533.6300980/1‑94 (MQ=60)
CAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACC > SRR4302533.1801545/1‑94 (MQ=60)
AGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAT < SRR4302533.4348864/94‑1 (MQ=60)
AGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAT < SRR4302533.4068334/94‑1 (MQ=60)
AGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAT > SRR4302533.1956845/1‑94 (MQ=60)
GGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATG > SRR4302533.4267882/1‑94 (MQ=60)
GGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATG < SRR4302533.2770434/94‑1 (MQ=60)
GCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGC > SRR4302533.2702264/1‑94 (MQ=60)
GCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGC > SRR4302533.4076139/1‑94 (MQ=60)
GCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGC > SRR4302533.5198125/1‑94 (MQ=60)
ATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCA > SRR4302533.3895309/1‑94 (MQ=60)
TTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCAT > SRR4302533.2598826/1‑94 (MQ=60)
TGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATC < SRR4302533.5582178/94‑1 (MQ=60)
CGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTG > SRR4302533.4438987/1‑94 (MQ=60)
CGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTG < SRR4302533.862347/94‑1 (MQ=60)
GTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGG > SRR4302533.1614400/1‑94 (MQ=60)
GTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGG > SRR4302533.1143320/1‑94 (MQ=60)
TATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGA < SRR4302533.3609793/94‑1 (MQ=60)
ATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGAT < SRR4302533.2968428/94‑1 (MQ=60)
ATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGAT < SRR4302533.3054954/94‑1 (MQ=60)
TTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATA < SRR4302533.4076912/94‑1 (MQ=60)
TCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATAT < SRR4302533.4200476/94‑1 (MQ=60)
TCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATAT < SRR4302533.630437/94‑1 (MQ=60)
TCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATAT < SRR4302533.4002594/94‑1 (MQ=60)
CGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATC < SRR4302533.5824820/94‑1 (MQ=60)
CGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATC > SRR4302533.1249918/1‑94 (MQ=60)
CGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGGTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATC > SRR4302533.615682/1‑94 (MQ=60)
GTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCG > SRR4302533.3262725/1‑94 (MQ=60)
GTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGACAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCG > SRR4302533.3397540/1‑94 (MQ=60)
ATCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCG < SRR4302533.3781836/94‑1 (MQ=60)
CAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTAGATATCGAG < SRR4302533.3865393/94‑1 (MQ=60)
GCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACA < SRR4302533.3755104/94‑1 (MQ=60)
CAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAG < SRR4302533.3510983/94‑1 (MQ=60)
CAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAG > SRR4302533.1801578/1‑94 (MQ=60)
CAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAG < SRR4302533.2295593/94‑1 (MQ=60)
CAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAG < SRR4302533.4821576/94‑1 (MQ=60)
AGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGC > SRR4302533.3729655/1‑94 (MQ=60)
AGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGC > SRR4302533.1167393/1‑94 (MQ=60)
GTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCA > SRR4302533.4342804/1‑94 (MQ=60)
TGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCAC < SRR4302533.1950234/94‑1 (MQ=60)
TGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCAC > SRR4302533.1520747/1‑94 (MQ=60)
TGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCAC > SRR4302533.2124786/1‑94 (MQ=60)
AGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACAT > SRR4302533.940224/1‑94 (MQ=60)
AGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACAT < SRR4302533.334530/94‑1 (MQ=60)
AAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCG < SRR4302533.5982901/94‑1 (MQ=60)
AACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGG > SRR4302533.847719/1‑94 (MQ=60)
AATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGC > SRR4302533.1422266/1‑94 (MQ=60)
AATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGC > SRR4302533.4590845/1‑94 (MQ=60)
ATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCA < SRR4302533.3955001/94‑1 (MQ=60)
TACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTT < SRR4302533.3045262/94‑1 (MQ=60)
ACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTT < SRR4302533.3345130/94‑1 (MQ=60)
ACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTT < SRR4302533.1995984/94‑1 (MQ=60)
ACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTT < SRR4302533.5696281/94‑1 (MQ=60)
CGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTA > SRR4302533.338414/1‑94 (MQ=60)
GGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTAT < SRR4302533.3603441/94‑1 (MQ=60)
GGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTAT < SRR4302533.2664570/94‑1 (MQ=60)
CGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCA < SRR4302533.850337/94‑1 (MQ=60)
CGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCA > SRR4302533.5275221/1‑94 (MQ=60)
CGATATTCAGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCA < SRR4302533.1900983/94‑1 (MQ=60)
GATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATTCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAC < SRR4302533.3637086/94‑1 (MQ=60)
GATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAC < SRR4302533.4331809/94‑1 (MQ=60)
GATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAC > SRR4302533.4831369/1‑94 (MQ=60)
ATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACC > SRR4302533.682141/1‑94 (MQ=60)
CCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCC > SRR4302533.5260802/1‑94 (MQ=60)
GGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGAT < SRR4302533.6136255/94‑1 (MQ=60)
GGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGAAGTTTATGCACCGCGCCGAT > SRR4302533.5355506/1‑94 (MQ=60)
GTCAAGCCGCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATAGAGAAACAGCACATCCGGGCGCAGTTTATGCTCCGCGCCGATC < SRR4302533.3411516/94‑1 (MQ=60)
GTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATC < SRR4302533.2742320/94‑1 (MQ=60)
TCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCC < SRR4302533.1800913/94‑1 (MQ=60)
CAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCC > SRR4302533.2124835/1‑94 (MQ=60)
AAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCT < SRR4302533.1439907/94‑1 (MQ=60)
AAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCT < SRR4302533.4376864/94‑1 (MQ=60)
AGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTT < SRR4302533.351540/94‑1 (MQ=60)
AGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTT < SRR4302533.3803600/94‑1 (MQ=60)
CACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCC > SRR4302533.886038/1‑94 (MQ=60)
CCCCCCCCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCAC < SRR4302533.253889/94‑1 (MQ=60)
CCCCCACCATTTCCAGACCACTTATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCAC < SRR4302533.6150540/94‑1 (MQ=60)
CCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCAC > SRR4302533.3265226/1‑94 (MQ=60)
|
TAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCAC > NC_000913/2210690‑2210874
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
