Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,247,350 |
T→C |
S97G (AGT→GGT) |
yeiE ← |
putative transcriptional regulator LYSR‑type |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,247,350 | 0 | T | C | 99.6%
| 886.5
/ NA
| 271 | S97G (AGT→GGT) | yeiE | putative transcriptional regulator LYSR‑type |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (123/147); minor base G (0/1); total (123/148) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 287 total aligned reads displayed.
TATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACTACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGA > NC_000913/2247260‑2247438
|
tATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGtaccac > 1:5894216/1‑93 (MQ=255)
tATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGtaccac > 1:1141795/1‑93 (MQ=255)
tCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCTATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTgg > 2:2877460/1‑93 (MQ=255)
cccAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGc > 2:951804/1‑93 (MQ=255)
cAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCAt > 2:7374992/1‑93 (MQ=255)
cAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCAt < 2:7884408/93‑1 (MQ=255)
cAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCAt < 1:2627641/93‑1 (MQ=255)
aaCGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGCATGTAGTTACCGCTGCTACCACTGGCATa > 1:1259026/1‑93 (MQ=255)
aaCGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATa < 2:3854366/93‑1 (MQ=255)
aCGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAg > 1:7566396/1‑93 (MQ=255)
cGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGTTGGTACCACTGGCATAGa < 2:9836718/93‑1 (MQ=255)
cGCTAAGTGCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGa < 1:8057899/93‑1 (MQ=255)
gCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGAt < 2:9156069/93‑1 (MQ=255)
gCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGAt < 2:6874909/93‑1 (MQ=255)
aaGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACg > 1:3071944/1‑93 (MQ=255)
aaGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACg > 2:6157745/1‑93 (MQ=255)
gTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGaa < 1:5607993/93‑1 (MQ=255)
ttCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAAt > 2:8804150/1‑93 (MQ=255)
tCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATc < 1:8664819/93‑1 (MQ=255)
aaTCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATcgc < 2:7698650/93‑1 (MQ=255)
aTCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATcgcg > 2:7306711/1‑93 (MQ=255)
gCATCTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATTCGAATCGCGCCGt < 2:8052518/93‑1 (MQ=255)
gCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGt > 1:7205012/1‑93 (MQ=255)
gCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGt < 2:8953099/93‑1 (MQ=255)
gCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGt > 1:2719198/1‑93 (MQ=255)
aaCTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTg > 1:8998335/1‑93 (MQ=255)
cTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTc > 2:6541436/1‑93 (MQ=255)
cTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTc < 2:9926230/93‑1 (MQ=255)
cTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTc < 1:5841102/93‑1 (MQ=255)
tGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCt > 1:7792231/1‑93 (MQ=255)
gCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCtt > 1:1385339/1‑93 (MQ=255)
gCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCtt < 1:5354553/93‑1 (MQ=255)
ggATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTcg < 1:2137732/93‑1 (MQ=255)
gATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTcgc < 1:2006265/93‑1 (MQ=255)
aTAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATAGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTcgcg > 2:3342733/1‑93 (MQ=255)
tAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGa > 2:1881581/1‑93 (MQ=255)
tAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGa < 2:121115/93‑1 (MQ=255)
aaTCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGaa < 1:1898002/93‑1 (MQ=255)
aTCATGGCGATAACGGGCGATAACTTCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGaaa < 2:3008858/93‑1 (MQ=255)
aTCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGaaa > 1:7394266/1‑93 (MQ=255)
tCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGacac > 1:9542069/1‑93 (MQ=255)
cATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACa < 1:5333207/93‑1 (MQ=255)
cATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACa < 2:7145008/93‑1 (MQ=255)
aTGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAg < 2:1459902/93‑1 (MQ=255)
tGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAgt < 1:3123121/93‑1 (MQ=255)
tGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAgt > 2:6436391/1‑93 (MQ=255)
ggCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAgtt < 1:2488550/93‑1 (MQ=255)
gCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATCCGAATCGCGCCGTTGTCTTCGCGAAACAgttg < 2:5571434/93‑1 (MQ=255)
cGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAgttgt < 2:5241202/93‑1 (MQ=255)
aTAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATAGCGCCGTTGTCTTCGCGAAACAGATGTTc > 2:4246471/1‑93 (MQ=255)
tAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCg > 2:4142944/1‑93 (MQ=255)
aaCGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGa > 1:6007033/1‑93 (MQ=255)
cGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGAtt < 2:8659045/93‑1 (MQ=255)
gggCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGAttt > 1:5124449/1‑93 (MQ=255)
gggCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGAttt < 1:2322401/93‑1 (MQ=255)
gggCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGAttt > 1:2802374/1‑93 (MQ=255)
gATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAAc < 1:6238939/93‑1 (MQ=255)
gATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAAc < 1:3501574/93‑1 (MQ=255)
aTAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAAcc > 1:7498177/1‑93 (MQ=255)
aTAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAAcc > 1:9246749/1‑93 (MQ=255)
aTAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCACGCCGTTGTCTTCCCGAAACAATTGTTCGATTTCAAcc > 1:4331674/1‑93 (MQ=255)
tAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCCCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCg > 1:4007942/1‑93 (MQ=255)
aCTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGcc > 2:10011597/1‑93 (MQ=255)
aCTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGcc < 2:4350661/93‑1 (MQ=255)
cTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCt > 1:795870/1‑93 (MQ=255)
tGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTg < 2:9789368/93‑1 (MQ=255)
tGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTg < 1:6674032/93‑1 (MQ=255)
gcaggcagAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGt > 1:4386154/1‑93 (MQ=255)
aggcagAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTc > 2:2114618/1‑93 (MQ=255)
ggcagAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCa > 1:7321439/1‑93 (MQ=255)
ggcagAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCa > 1:6235464/1‑93 (MQ=255)
gcagAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCaa < 1:5061351/93‑1 (MQ=255)
gcagAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCaa < 1:9171508/93‑1 (MQ=255)
gcagAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCaa < 1:9393089/93‑1 (MQ=255)
gAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCa < 1:979643/93‑1 (MQ=255)
aaTGTAGTTACCGATGGTACCACTGGCATAGATTCGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCaa < 1:9725768/93‑1 (MQ=255)
aaTGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCaa < 1:6966185/93‑1 (MQ=255)
aaTGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCaa < 2:6762898/93‑1 (MQ=255)
aTGTAGTTACCGATGGTACATCAGGCATAGATAGAAGTCGCGCCGTGATCTTCGCGAAACAGTTGTTGGATTTCAACCGCCTGTTCAAGCAAt < 2:6227121/93‑1 (MQ=255)
tGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATg > 2:1415614/1‑93 (MQ=255)
tGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATg > 1:8024546/1‑93 (MQ=255)
tGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATg < 2:5208281/93‑1 (MQ=255)
gTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGc < 1:4713810/93‑1 (MQ=255)
gTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGc < 2:8315173/93‑1 (MQ=255)
tAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGcc > 1:4142645/1‑93 (MQ=255)
aGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCa < 2:4935264/93‑1 (MQ=255)
gTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCaa < 2:2303205/93‑1 (MQ=255)
gTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCCGTTCAAGCAATGCCaa > 2:2704468/1‑93 (MQ=255)
gTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGGTCGATTTCAACCGACTGTTCAAGCAATGCCaa > 1:3259049/1‑93 (MQ=255)
ttACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAac > 2:8132665/1‑93 (MQ=255)
ttACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAac < 2:1675478/93‑1 (MQ=255)
gtACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAac < 1:3361182/92‑1 (MQ=255)
gccGATGGTACCACTGGCATAGATACGAAGCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAacgc < 1:3669890/92‑1 (MQ=255)
aCCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAacgc < 2:6070891/93‑1 (MQ=255)
ccGATGGTCCCACGGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAacgca < 2:7423367/93‑1 (MQ=255)
gATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAacgcacg < 1:6414399/93‑1 (MQ=255)
ggTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCgg > 2:4487020/1‑93 (MQ=255)
gTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGa > 2:927175/1‑93 (MQ=255)
gTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGa < 2:1865349/93‑1 (MQ=255)
gTACCACTGGCATAGATACGAAGCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGa < 2:1241785/93‑1 (MQ=255)
|
TATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACTACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGA > NC_000913/2247260‑2247438
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGCTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACTACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGATAGAG > NC_000913/2247257‑2247443
|
GGCTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACC < SRR4302540.4209940/94‑1 (MQ=60)
GCTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCA > SRR4302540.76759/1‑94 (MQ=60)
CTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCAC > SRR4302540.1153730/1‑94 (MQ=60)
CTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCAC < SRR4302540.980180/94‑1 (MQ=60)
CTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCAC < SRR4302540.7499691/94‑1 (MQ=60)
CTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCAC > SRR4302540.6048424/1‑94 (MQ=60)
CTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCAC > SRR4302540.5959315/1‑94 (MQ=60)
CTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCAGGGCGATAACGTGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCAC > SRR4302540.6048425/1‑94 (MQ=60)
CTA‑TCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACT < SRR4302540.8142787/94‑1 (MQ=60)
TATTCCCAACGCTAAGTGCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACT < SRR4302540.2740769/94‑1 (MQ=60)
ATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTG > SRR4302540.2028999/1‑94 (MQ=60)
TCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGC > SRR4302540.2517222/1‑94 (MQ=60)
CCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCA > SRR4302540.4349041/1‑94 (MQ=60)
CCCAACGCTAAATTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCA < SRR4302540.333936/94‑1 (MQ=60)
CCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCAT < SRR4302540.9828142/94‑1 (MQ=60)
CAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGCATGTAGTTACCGCTGCTACCACTGGCATA > SRR4302540.1271941/1‑94 (MQ=60)
CAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATA > SRR4302540.1271943/1‑94 (MQ=60)
CAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATA > SRR4302540.5808477/1‑94 (MQ=60)
CAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATA < SRR4302540.2656070/94‑1 (MQ=60)
AACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAG > SRR4302540.7651266/1‑94 (MQ=60)
ACGCTAAGTTCCATCGGCAACTTCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGA < SRR4302540.2727106/94‑1 (MQ=60)
CGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGAT > SRR4302540.8964446/1‑94 (MQ=60)
CGCTAAGTGCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGAT < SRR4302540.8151457/94‑1 (MQ=60)
GCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATA > SRR4302540.3457898/1‑94 (MQ=60)
GCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATA > SRR4302540.8831707/1‑94 (MQ=60)
CTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATAC < SRR4302540.3198248/94‑1 (MQ=60)
CTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATAC < SRR4302540.9416884/94‑1 (MQ=60)
CTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATAC < SRR4302540.5642570/94‑1 (MQ=60)
TAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACG < SRR4302540.7600643/94‑1 (MQ=60)
TAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACG > SRR4302540.3105650/1‑94 (MQ=60)
AAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGA < SRR4302540.3490582/94‑1 (MQ=60)
AAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGA > SRR4302540.6352320/1‑94 (MQ=60)
AGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAA > SRR4302540.7410290/1‑94 (MQ=60)
GTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAAT < SRR4302540.5669691/94‑1 (MQ=60)
TTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATC < SRR4302540.3141447/94‑1 (MQ=60)
TCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCG < SRR4302540.8765461/94‑1 (MQ=60)
CAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGC > SRR4302540.4192031/1‑94 (MQ=60)
ATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGC > SRR4302540.9595558/1‑94 (MQ=60)
TCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCC < SRR4302540.6537422/94‑1 (MQ=60)
TCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCC < SRR4302540.7153235/94‑1 (MQ=60)
TCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCC < SRR4302540.7703642/94‑1 (MQ=60)
GGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGT > SRR4302540.7285335/1‑94 (MQ=60)
GGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGT > SRR4302540.2748512/1‑94 (MQ=60)
CAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTG > SRR4302540.9106286/1‑94 (MQ=60)
CAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTG > SRR4302540.4835273/1‑94 (MQ=60)
ACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTC > SRR4302540.6421716/1‑94 (MQ=60)
CTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCT < SRR4302540.5905694/94‑1 (MQ=60)
CTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCT < SRR4302540.5905697/94‑1 (MQ=60)
CTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCT > SRR4302540.7883316/1‑94 (MQ=60)
TGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTT > SRR4302540.1400145/1‑94 (MQ=60)
TGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTT > SRR4302540.4083713/1‑94 (MQ=60)
GCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTC < SRR4302540.7128142/94‑1 (MQ=60)
GCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTC < SRR4302540.5413349/94‑1 (MQ=60)
CGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGGTGTCTTCG > SRR4302540.2241289/1‑94 (MQ=60)
GGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGC < SRR4302540.2160697/94‑1 (MQ=60)
GATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCG < SRR4302540.2027977/94‑1 (MQ=60)
AATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAA > SRR4302540.7476655/1‑94 (MQ=60)
AATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAA < SRR4302540.8174998/94‑1 (MQ=60)
AATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAA < SRR4302540.1918768/94‑1 (MQ=60)
AATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGGTGTCTTCGCGAAA > SRR4302540.9295804/1‑94 (MQ=60)
ATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGACAC > SRR4302540.9654976/1‑94 (MQ=60)
ATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAAC < SRR4302540.2007447/94‑1 (MQ=60)
ATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAAC > SRR4302540.9654975/1‑94 (MQ=60)
ATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAAC > SRR4302540.2093455/1‑94 (MQ=60)
TCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCTGTTGTCTTCGCGAAACA > SRR4302540.8057494/1‑94 (MQ=60)
CATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAG < SRR4302540.5391656/94‑1 (MQ=60)
CATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAG < SRR4302540.5391657/94‑1 (MQ=60)
CATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAG > SRR4302540.4519967/1‑94 (MQ=60)
CATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAG < SRR4302540.4014353/94‑1 (MQ=60)
CATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAG > SRR4302540.128941/1‑94 (MQ=60)
ATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAACCAGT > SRR4302540.3128528/1‑94 (MQ=60)
TGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTT < SRR4302540.3157237/94‑1 (MQ=60)
GGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTG < SRR4302540.9277714/94‑1 (MQ=60)
GGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTG < SRR4302540.2515354/94‑1 (MQ=60)
GGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTG < SRR4302540.5839756/94‑1 (MQ=60)
GCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGT < SRR4302540.2800443/94‑1 (MQ=60)
CGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTT > SRR4302540.2476647/1‑94 (MQ=60)
ATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATCCGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCG < SRR4302540.5204671/94‑1 (MQ=60)
TAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGA > SRR4302540.2334240/1‑94 (MQ=60)
TAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGA < SRR4302540.4108159/94‑1 (MQ=60)
TAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGA > SRR4302540.6073634/1‑94 (MQ=60)
AACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGAT < SRR4302540.8312110/94‑1 (MQ=60)
ACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATT < SRR4302540.6252533/94‑1 (MQ=60)
CGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTT > SRR4302540.5179951/1‑94 (MQ=60)
CGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTT > SRR4302540.2832643/1‑94 (MQ=60)
GGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTC < SRR4302540.2347408/94‑1 (MQ=60)
GGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTC > SRR4302540.9875671/1‑94 (MQ=60)
GGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTC < SRR4302540.2753949/94‑1 (MQ=60)
GATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACC > SRR4302540.8114740/1‑94 (MQ=60)
GATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACC > SRR4302540.9357464/1‑94 (MQ=60)
GATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACC > SRR4302540.7581954/1‑94 (MQ=60)
GATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACC < SRR4302540.6308355/94‑1 (MQ=60)
GATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACC < SRR4302540.6308354/94‑1 (MQ=60)
GATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACC > SRR4302540.1771384/1‑94 (MQ=60)
GATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACC > SRR4302540.4378825/1‑94 (MQ=60)
GATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACC < SRR4302540.3539712/94‑1 (MQ=60)
GATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGCTGTTCtgtttcaccc > SRR4302540.7581953/1‑84 (MQ=60)
GATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCACGCCGTTGTCTTCCCGAAACAATTGTTCGATTTCAACC > SRR4302540.4378824/1‑94 (MQ=60)
ATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCG > SRR4302540.9485383/1‑94 (MQ=60)
ATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCCCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCG > SRR4302540.4051094/1‑94 (MQ=60)
TAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGC < SRR4302540.812482/94‑1 (MQ=60)
TAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGC > SRR4302540.9862378/1‑94 (MQ=60)
AACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCTCCGTTGTCTTCGGGAAACAGTTGTTCGATTTCAACCGCC > SRR4302540.3164676/1‑94 (MQ=60)
AACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCC < SRR4302540.7285974/94‑1 (MQ=60)
ACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCT < SRR4302540.9691187/94‑1 (MQ=60)
ACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCT > SRR4302540.804326/1‑94 (MQ=60)
CTGCAGGCAGAATGTAGTTACCGATGTTACCACTGGCATAGATCCGAATCGCGCCGTTGTGTTCGCGAAACAGTTGTTCGATTTCAACCGCCTG < SRR4302540.3758827/94‑1 (MQ=60)
CTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTG > SRR4302540.7522517/1‑94 (MQ=60)
CTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTG > SRR4302540.2848762/1‑94 (MQ=60)
CTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTG < SRR4302540.5537279/94‑1 (MQ=60)
ATGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTG < SRR4302540.4995125/94‑1 (MQ=60)
TGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGT < SRR4302540.7376458/94‑1 (MQ=60)
TGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGT > SRR4302540.4433771/1‑94 (MQ=60)
TGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGT < SRR4302540.6763193/94‑1 (MQ=60)
TGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGT < SRR4302540.6747767/94‑1 (MQ=60)
AGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCA > SRR4302540.7403208/1‑94 (MQ=60)
AGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCA > SRR4302540.6304815/1‑94 (MQ=60)
GGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAA < SRR4302540.3614780/94‑1 (MQ=60)
GGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAA < SRR4302540.5156601/94‑1 (MQ=60)
GCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAG < SRR4302540.9504865/94‑1 (MQ=60)
GCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAG < SRR4302540.6778096/94‑1 (MQ=60)
GCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAG < SRR4302540.5116071/94‑1 (MQ=60)
GCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAG < SRR4302540.9281525/94‑1 (MQ=60)
AGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCA > SRR4302540.9962818/1‑94 (MQ=60)
AGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCA < SRR4302540.9912519/94‑1 (MQ=60)
AGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCA > SRR4302540.2017622/1‑94 (MQ=60)
AGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCA < SRR4302540.4416088/94‑1 (MQ=60)
AGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCA > SRR4302540.5253893/1‑94 (MQ=60)
GAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAA < SRR4302540.989677/94‑1 (MQ=60)
AATGTAGTTACCGATGGTACCACTGGCATAGATTCGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAAT < SRR4302540.9840002/94‑1 (MQ=60)
AATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAAT < SRR4302540.7043642/94‑1 (MQ=60)
AATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAAT < SRR4302540.6075817/94‑1 (MQ=60)
ATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATG > SRR4302540.8117870/1‑94 (MQ=60)
TGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGC < SRR4302540.5412480/94‑1 (MQ=60)
GTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCC > SRR4302540.4187467/1‑94 (MQ=60)
GTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCC < SRR4302540.4642721/94‑1 (MQ=60)
GTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCC < SRR4302540.4764173/94‑1 (MQ=60)
AGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGGTCGATTTCAACCGACTGTTCAAGCAATGCCAA > SRR4302540.3294591/1‑94 (MQ=60)
GTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAAC < SRR4302540.7936861/94‑1 (MQ=60)
GTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAAC < SRR4302540.3042340/94‑1 (MQ=60)
GTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAAC > SRR4302540.5153925/1‑94 (MQ=60)
GTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAAC > SRR4302540.5920172/1‑94 (MQ=60)
GTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACG < SRR4302540.3397977/94‑1 (MQ=60)
TACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGC < SRR4302540.796182/94‑1 (MQ=60)
GCCGATGGTACCACTGGCATAGATACGAAGCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCA < SRR4302540.3710036/94‑1 (MQ=60)
CCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCAC < SRR4302540.1565129/94‑1 (MQ=60)
CGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCATG > SRR4302540.334842/1‑94 (MQ=60)
CGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACG < SRR4302540.1253822/94‑1 (MQ=60)
CGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACA < SRR4302540.9184337/94‑1 (MQ=60)
GATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGC < SRR4302540.6485777/94‑1 (MQ=60)
ATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCG > SRR4302540.237219/1‑94 (MQ=60)
ATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCG > SRR4302540.7447443/1‑94 (MQ=60)
ATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCG > SRR4302540.7832542/1‑94 (MQ=60)
GTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGAT < SRR4302540.6547111/94‑1 (MQ=60)
ACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGATAG < SRR4302540.1520531/94‑1 (MQ=60)
CCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGATAGA > SRR4302540.8576996/1‑94 (MQ=60)
CCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGATAGA < SRR4302540.5237128/94‑1 (MQ=60)
CCACTGGCACAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGATAGA < SRR4302540.7205636/94‑1 (MQ=60)
CACTGGCATAGATACGAATCGCGCCGGTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCTAGCAATGCCAACGCACGCGGATAGAG > SRR4302540.7357186/1‑94 (MQ=60)
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GGCTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACTACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGATAGAG > NC_000913/2247257‑2247443
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
