Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,281,515	A→G	R151R (CGT→CGC)	yejK ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,281,515	0	A	G	98.6%	912.3 / ‑3.8	287	R151R (CGT→CGC)	yejK	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (2/2); new base G (139/143); total (142/145)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 298 total aligned reads displayed.

AAATCCGCCACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATACGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGTTGCTCA  >  NC_000913/2281426‑2281606

  aTCCGCCACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTAAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATgcgcgc                                                                                        >  2:6842353/1‑93 (MQ=255)

    ccGCCACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGcaa                                                                                      <  2:9035122/93‑1 (MQ=255)

     cGCCACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGcaac                                                                                     >  1:6350923/1‑93 (MQ=255)

     cGCCACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGcaac                                                                                     <  2:5727448/93‑1 (MQ=255)

     cGCCACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGcaac                                                                                     >  2:9144443/1‑93 (MQ=255)

        cACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAat                                                                                  >  1:9817087/1‑93 (MQ=255)

        cACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAat                                                                                  >  2:5168226/1‑93 (MQ=255)

           tttGCGCCCTACTCGCCCTTTCAGGAAAGTTAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATc                                                                               <  1:1813168/93‑1 (MQ=255)

           tttGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATc                                                                               <  2:2490657/93‑1 (MQ=255)

           tttGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATc                                                                               <  1:9044728/93‑1 (MQ=255)

           tttGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATc                                                                               >  1:4524885/1‑93 (MQ=255)

           tttGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATc                                                                               >  2:6342084/1‑93 (MQ=255)

           tttGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATc                                                                               >  2:3561176/1‑93 (MQ=255)

             tGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCg                                                                             <  1:8292799/93‑1 (MQ=255)

               cgcCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCa                                                                           <  1:8526946/93‑1 (MQ=255)

               cgcCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCa                                                                           <  1:7343229/93‑1 (MQ=255)

                gcCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCAt                                                                          >  1:3221121/1‑93 (MQ=255)

                 cccTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCAtg                                                                         >  1:7755022/1‑93 (MQ=255)

                 cccTACTCGCCCTTTCAGGAAAGTGAGACAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAGCAATATCCGCAtg                                                                         >  1:2581312/1‑93 (MQ=255)

                  ccTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCAtga                                                                        <  2:1774172/93‑1 (MQ=255)

                  ccTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCAtga                                                                        <  2:8194367/93‑1 (MQ=255)

                  ccTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCAtga                                                                        <  2:8533846/93‑1 (MQ=255)

                   cTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCAtgat                                                                       <  2:5097588/93‑1 (MQ=255)

                   cTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCAtgat                                                                       <  2:5216077/93‑1 (MQ=255)

                    tACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCAtgatt                                                                      >  2:3872040/1‑93 (MQ=255)

                    tACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCAtgatt                                                                      >  1:6095880/1‑93 (MQ=255)

                    tACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCAtgatt                                                                      >  2:1043799/1‑93 (MQ=255)

                    tACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCAtgatt                                                                      >  2:2636196/1‑93 (MQ=255)

                    tACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCAtgatt                                                                      >  1:2637637/1‑93 (MQ=255)

                     aCTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCAtgattg                                                                     >  2:9524562/1‑93 (MQ=255)

                      cTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCAtgattga                                                                    >  1:5868572/1‑93 (MQ=255)

                       tCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCAtgattgat                                                                   >  1:9341131/1‑93 (MQ=255)

                        cGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGata                                                                  <  2:1377535/93‑1 (MQ=255)

                          cccTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATc                                                                >  2:7539827/1‑93 (MQ=255)

                            cTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCaa                                                              <  1:283689/93‑1 (MQ=255)

                            cTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCaa                                                              >  1:1904655/1‑93 (MQ=255)

                            cTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCaa                                                              >  2:440318/1‑93 (MQ=255)

                             tttCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAg                                                             >  2:5355402/1‑93 (MQ=255)

                             tttCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAg                                                             >  1:6228105/1‑93 (MQ=255)

                              ttCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGa                                                            >  1:243640/1‑93 (MQ=255)

                              ttCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGa                                                            >  2:1532976/1‑93 (MQ=255)

                              ttCAGGAAAGGGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGa                                                            <  1:5401091/93‑1 (MQ=255)

                               tCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGAt                                                           >  2:3377921/1‑93 (MQ=255)

                               tCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGAt                                                           <  2:883274/93‑1 (MQ=255)

                                 aGGAAATTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATaa                                                         <  2:9873075/93‑1 (MQ=255)

                                 aGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATaa                                                         <  1:4310812/93‑1 (MQ=255)

                                       gggagaTAGCGGGTGGACTCTGGATGGGTTTCCCATGCGGTTAAAGCGATGCGCGCAACAATAGCCGCATGATTGATAGCAAGATAAtgggtt                                                   <  1:8894273/91‑1 (MQ=255)

                                       gTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAAtgggtt                                                   >  2:7710080/1‑93 (MQ=255)

                                         gagaTAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAAtgggttgg                                                 <  1:7109634/93‑1 (MQ=255)

                                          agaTAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATACGCGCAACAATATCCGCATGATTGATATCAAGATAAtgggttggg                                                >  1:2252814/1‑93 (MQ=255)

                                            aTAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATgggttgggtt                                              <  2:4743228/93‑1 (MQ=255)

                                              aGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGa                                            <  1:5210665/93‑1 (MQ=255)

                                              aGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGa                                            <  2:9264888/93‑1 (MQ=255)

                                               gCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGAt                                           <  1:6858628/93‑1 (MQ=255)

                                                  ggTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTc                                        <  1:1488021/93‑1 (MQ=255)

                                                  ggTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTc                                        >  1:4361834/1‑93 (MQ=255)

                                                  ggTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTc                                        <  1:1332955/93‑1 (MQ=255)

                                                    tGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCga                                      >  1:8721231/1‑93 (MQ=255)

                                                    tGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAACGGGTTGGGTTGATGTCga                                      >  1:89806/1‑93 (MQ=255)

                                                     ggACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCgag                                     >  1:4098784/1‑93 (MQ=255)

                                                     ggACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCgag                                     <  1:7924552/93‑1 (MQ=255)

                                                      gACTCTGGATTGGGTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCgaga                                    >  2:7190040/1‑93 (MQ=255)

                                                        ctctGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGAtt                                  >  1:7250150/1‑93 (MQ=255)

                                                         tctGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGAttt                                 >  1:2733622/1‑93 (MQ=255)

                                                         tctGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGAttt                                 >  2:9379530/1‑93 (MQ=255)

                                                          ctGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGAtttt                                >  1:3059161/1‑93 (MQ=255)

                                                           tGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTc                               >  1:5594274/1‑93 (MQ=255)

                                                             gATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGt                             <  1:6577144/93‑1 (MQ=255)

                                                              aTTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGtt                            >  1:7981306/1‑93 (MQ=255)

                                                              aTTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGtt                            >  2:2969373/1‑93 (MQ=255)

                                                              aTTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGtt                            >  2:2521901/1‑93 (MQ=255)

                                                              aTTGGTTTCCAATTAGGTTAAATCGATGCGCGGAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGtt                            <  2:4968069/93‑1 (MQ=255)

                                                               ttGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTa                           <  1:3489458/93‑1 (MQ=255)

                                                               ttGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTa                           >  2:1631924/1‑93 (MQ=255)

                                                               ttGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTa                           >  1:4954640/1‑93 (MQ=255)

                                                                tGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTaa                          >  2:3274972/1‑93 (MQ=255)

                                                                tGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTaa                          >  2:8681224/1‑93 (MQ=255)

                                                                tGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTaa                          <  2:2193849/93‑1 (MQ=255)

                                                                  gTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAAcg                        >  1:8617924/1‑93 (MQ=255)

                                                                     tCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGATGATGTCGAGATTTTCGTTAACtcgc                     >  2:9804150/1‑93 (MQ=255)

                                                                      cccATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCa                    <  2:4807441/93‑1 (MQ=255)

                                                                      cccATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCa                    <  1:2119878/93‑1 (MQ=255)

                                                                       ccATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCAt                   >  1:7499846/1‑93 (MQ=255)

                                                                       ccATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCAt                   >  1:3963757/1‑93 (MQ=255)

                                                                         cttCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATAc                 <  1:5112026/92‑1 (MQ=255)

                                                                          ttCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCNANATTTTCGTTAACGCGCATACt                >  1:3600336/1‑93 (MQ=255)

                                                                          ttCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACt                <  1:4830446/93‑1 (MQ=255)

                                                                          ttCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACt                >  2:6826613/1‑93 (MQ=255)

                                                                          ttCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACt                >  1:4939030/1‑93 (MQ=255)

                                                                          ttCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACt                >  1:237750/1‑93 (MQ=255)

                                                                             ggTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCt             >  2:4221372/1‑93 (MQ=255)

                                                                               ttAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCa           <  2:4554518/93‑1 (MQ=255)

                                                                                  aaTCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGt        <  1:6720591/93‑1 (MQ=255)

                                                                                  aaTCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGt        <  1:2018339/93‑1 (MQ=255)

                                                                                   aTCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGtt       <  2:3502241/93‑1 (MQ=255)

                                                                                    tCGATTCGCGCAGCAATATCCGCATGATTGATATCAAGATAATTGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGATg      >  2:9901847/1‑93 (MQ=255)

                                                                                     cGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGTTGc     <  1:4873066/93‑1 (MQ=255)

                                                                                     cGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGTTGc     <  2:6095879/93‑1 (MQ=255)

                                                                                      gATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGTTGCt    >  1:533522/1‑93 (MQ=255)

                                                                                        tACGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGTTGCTCa  <  1:9208508/93‑1 (MQ=255)

AAATCCGCCACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATACGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGTTGCTCA  >  NC_000913/2281426‑2281606

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AAAGAAATCCGCCACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATACGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGTTGCTCAG  >  NC_000913/2281422‑2281607

AAAGAAATCCGCCACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATG                                                                                              <  SRR4302540.6263761/94‑1 (MQ=60)

AAAGAAATCCGCCACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATG                                                                                              <  SRR4302540.9582696/94‑1 (MQ=60)

AAAGAAATCCGCCACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATG                                                                                              <  SRR4302540.9146545/94‑1 (MQ=60)

      ATCCGCCACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCA                                                                                        >  SRR4302540.1841813/1‑94 (MQ=60)

        CCGCCACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAAC                                                                                      >  SRR4302540.6421652/1‑94 (MQ=60)

         CGCCACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACA                                                                                     <  SRR4302540.7814951/94‑1 (MQ=60)

         CGCCACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACA                                                                                     <  SRR4302540.4605245/94‑1 (MQ=60)

           CCACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAAT                                                                                   >  SRR4302540.9931960/1‑94 (MQ=60)

           CCACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAAT                                                                                   >  SRR4302540.2284626/1‑94 (MQ=60)

            CACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTTCCATTCGGTTAAATCGATGAGCGCAACAATA                                                                                  >  SRR4302540.2610442/1‑94 (MQ=60)

            CACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTGCCATTCGGTTAAATCGATGCGGGCGACAATA                                                                                  >  SRR4302540.4922257/1‑94 (MQ=60)

            CACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATA                                                                                  <  SRR4302540.6859932/94‑1 (MQ=60)

            CACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATA                                                                                  >  SRR4302540.3131479/1‑94 (MQ=60)

            CACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATA                                                                                  <  SRR4302540.8921457/94‑1 (MQ=60)

             TCTTTGCGCCCTACTCGCCCTTTCAGGAAAGGGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATAT                                                                                 <  SRR4302540.9361267/94‑1 (MQ=60)

             CCTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGCTTTCCCATTCGGTTAAATCGATGCGCGCAACAATAT                                                                                 <  SRR4302540.1850538/94‑1 (MQ=60)

             ACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTCAATCGATGCGCGCAACAATAT                                                                                 >  SRR4302540.5097594/1‑94 (MQ=60)

             ACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATAT                                                                                 >  SRR4302540.4681938/1‑94 (MQ=60)

             ACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATAT                                                                                 >  SRR4302540.2073528/1‑94 (MQ=60)

              CTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATC                                                                                >  SRR4302540.4573883/1‑94 (MQ=60)

              CTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATC                                                                                <  SRR4302540.5931737/94‑1 (MQ=60)

               TTTGCGCCCTACTCGCCCTTTCAGGAAAGTTAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCC                                                                               <  SRR4302540.1832960/94‑1 (MQ=60)

               TTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCC                                                                               <  SRR4302540.7980908/94‑1 (MQ=60)

               TTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCC                                                                               <  SRR4302540.9153297/94‑1 (MQ=60)

                 TGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGC                                                                             <  SRR4302540.8389098/94‑1 (MQ=60)

                   CGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCAT                                                                           <  SRR4302540.7425161/94‑1 (MQ=60)

                   CGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCAT                                                                           >  SRR4302540.3256126/1‑94 (MQ=60)

                   CGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCAT                                                                           <  SRR4302540.8626024/94‑1 (MQ=60)

                    GCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATG                                                                          >  SRR4302540.2609140/1‑94 (MQ=60)

                    GCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATG                                                                          >  SRR4302540.4481365/1‑94 (MQ=60)

                    GCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATG                                                                          <  SRR4302540.2340727/94‑1 (MQ=60)

                    GCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATG                                                                          >  SRR4302540.7845593/1‑94 (MQ=60)

                    GCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATG                                                                          >  SRR4302540.7845592/1‑94 (MQ=60)

                    GCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCAGTTAAATCGATGCGCGCAACAATATCCGCATG                                                                          >  SRR4302540.8074131/1‑94 (MQ=60)

                    GCCCTACTCGCCCTTTCAGGAAAGTGAGACAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAGCAATATCCGCATG                                                                          >  SRR4302540.2609139/1‑94 (MQ=60)

                     CCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGA                                                                         >  SRR4302540.666058/1‑94 (MQ=60)

                      CCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGGCTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGAT                                                                        <  SRR4302540.8181096/94‑1 (MQ=60)

                       CTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATT                                                                       >  SRR4302540.2666206/1‑94 (MQ=60)

                       CTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATT                                                                       >  SRR4302540.6163729/1‑94 (MQ=60)

                       CTACTCGCCCTTGCAGGAAAGTGAGATAGCTGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATT                                                                       <  SRR4302540.5453800/94‑1 (MQ=60)

                        TACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTG                                                                      <  SRR4302540.3837471/94‑1 (MQ=60)

                         ACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGA                                                                     >  SRR4302540.4043729/1‑94 (MQ=60)

                         ACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGA                                                                     >  SRR4302540.5933449/1‑94 (MQ=60)

                          CTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGAT                                                                    >  SRR4302540.9452447/1‑94 (MQ=60)

                          CTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGAT                                                                    <  SRR4302540.6189890/94‑1 (MQ=60)

                           TCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGTAACAATATCCGCATGATTGATA                                                                   >  SRR4302540.9100724/1‑94 (MQ=60)

                           TCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATA                                                                   >  SRR4302540.5375679/1‑94 (MQ=60)

                           TCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATA                                                                   <  SRR4302540.3578922/94‑1 (MQ=60)

                           TCGCCCGTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATACGCGCAACAATATCCGCATGATTGATA                                                                   <  SRR4302540.8282278/94‑1 (MQ=60)

                            CGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATAT                                                                  <  SRR4302540.7216203/94‑1 (MQ=60)

                            CGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATAT                                                                  <  SRR4302540.3860567/94‑1 (MQ=60)

                            CGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATAT                                                                  <  SRR4302540.4993135/94‑1 (MQ=60)

                            CGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATAT                                                                  <  SRR4302540.4993136/94‑1 (MQ=60)

                             GCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATC                                                                 <  SRR4302540.5452242/94‑1 (MQ=60)

                              CCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCA                                                                >  SRR4302540.5935969/1‑94 (MQ=60)

                               CCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAA                                                               <  SRR4302540.4934169/94‑1 (MQ=60)

                               CCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAA                                                               >  SRR4302540.9315436/1‑94 (MQ=60)

                               CCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAA                                                               >  SRR4302540.1925472/1‑94 (MQ=60)

                               CCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAA                                                               >  SRR4302540.6313701/1‑94 (MQ=60)

                                CTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAG                                                              <  SRR4302540.286482/94‑1 (MQ=60)

                                CTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAG                                                              >  SRR4302540.6297371/1‑94 (MQ=60)

                                CTTTCAGGAAAGTGAGATAGCGGGTCGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAG                                                              <  SRR4302540.6249579/94‑1 (MQ=60)

                                CTTTCAGGAAAGTAAGATAGAGGGTGGACTCTGAATTGGTTTCAAATTCGGTTAAATAGATGCACGCAAAAAAATCCGCATGATTGATATCAAG                                                              <  SRR4302540.7812473/94‑1 (MQ=42)

                                 TTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGA                                                             <  SRR4302540.2406823/94‑1 (MQ=60)

                                 TTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGA                                                             >  SRR4302540.245985/1‑94 (MQ=60)

                                 TTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGA                                                             >  SRR4302540.245990/1‑94 (MQ=60)

                                 TTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGA                                                             >  SRR4302540.7396435/1‑94 (MQ=60)

                                  TTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGAT                                                            <  SRR4302540.4404235/94‑1 (MQ=60)

                                  TTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGAT                                                            <  SRR4302540.9035488/94‑1 (MQ=60)

                                  TTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGAT                                                            <  SRR4302540.8853680/94‑1 (MQ=60)

                                  TTCAGGAAAGTGAAAAAGCGGGTAGACTATGGATTGGTTTCCCATTCGGTTAAATCGATGAGCCCAACAATATAGGCATGATTGATAACAAGAT                                                            <  SRR4302540.9035489/94‑1 (MQ=42)

                                  TTCAGGAAAGGGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGAT                                                            <  SRR4302540.5460473/94‑1 (MQ=60)

                                     AGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAAT                                                         <  SRR4302540.4357739/94‑1 (MQ=60)

                                     AGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAAT                                                         >  SRR4302540.630944/1‑94 (MQ=60)

                                     AGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAAT                                                         <  SRR4302540.5170092/94‑1 (MQ=60)

                                     AGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAAT                                                         <  SRR4302540.8665515/94‑1 (MQ=60)

                                     AGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAAT                                                         >  SRR4302540.3467164/1‑94 (MQ=60)

                                     AGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAAT                                                         <  SRR4302540.4357738/94‑1 (MQ=60)

                                        AAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGG                                                      >  SRR4302540.4107720/1‑94 (MQ=60)

                                           GTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTG                                                   <  SRR4302540.8997230/94‑1 (MQ=60)

                                           GGGAGATAGCGGGTGGACTCTGGATGGGTTTCCCATGCGGTTAAAGCGATGCGCGCAACAATAGCCGCATGATTGATAGCAAGATAATGGGTTG                                                   <  SRR4302540.8997228/94‑1 (MQ=60)

                                            TGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGG                                                  <  SRR4302540.8551903/94‑1 (MQ=60)

                                             GAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGG                                                 <  SRR4302540.251249/94‑1 (MQ=60)

                                             GAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGG                                                 <  SRR4302540.1548573/94‑1 (MQ=60)

                                             GAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGG                                                 <  SRR4302540.7188759/94‑1 (MQ=60)

                                             GAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATACGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGG                                                 >  SRR4302540.2276992/1‑94 (MQ=60)

                                              AGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGT                                                <  SRR4302540.2145007/94‑1 (MQ=60)

                                                 TAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGA                                             >  SRR4302540.3277618/1‑94 (MQ=60)

                                                 TAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGA                                             <  SRR4302540.4974740/94‑1 (MQ=60)

                                                  AGCGTGTGGACTCTGGATTGGTTTCCCATTCGGATAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGAT                                            <  SRR4302540.9782434/94‑1 (MQ=60)

                                                  AGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGAT                                            >  SRR4302540.2110734/1‑94 (MQ=60)

                                                  AGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGAT                                            >  SRR4302540.49041/1‑94 (MQ=60)

                                                  AGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGAT                                            <  SRR4302540.1743897/94‑1 (MQ=60)

                                                  AGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGAT                                            <  SRR4302540.5267438/94‑1 (MQ=60)

                                                  AGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGAT                                            <  SRR4302540.5267437/94‑1 (MQ=60)

                                                  AGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGAT                                            <  SRR4302540.6630177/94‑1 (MQ=60)

                                                  AGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGAT                                            <  SRR4302540.7182043/94‑1 (MQ=60)

                                                   GCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATG                                           <  SRR4302540.2850317/94‑1 (MQ=60)

                                                   GCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATG                                           <  SRR4302540.6934632/94‑1 (MQ=60)

                                                     GGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTC                                         >  SRR4302540.9987268/1‑94 (MQ=60)

                                                     GGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTC                                         >  SRR4302540.6584162/1‑94 (MQ=60)

                                                     GGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTC                                         >  SRR4302540.4409261/1‑94 (MQ=60)

                                                      GGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCG                                        <  SRR4302540.1346895/94‑1 (MQ=60)

                                                      GGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCG                                        <  SRR4302540.1504372/94‑1 (MQ=60)

                                                       GTGGACTCTGGATTGGTTTCGCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGA                                       <  SRR4302540.8802979/94‑1 (MQ=60)

                                                       GTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGA                                       >  SRR4302540.8684271/1‑94 (MQ=60)

                                                       GTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGA                                       >  SRR4302540.8822495/1‑94 (MQ=60)

                                                       GTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAACGGGTTGGGTTGATGTCGA                                       >  SRR4302540.90752/1‑94 (MQ=60)

                                                        TGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAG                                      >  SRR4302540.4142998/1‑94 (MQ=60)

                                                        TGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAG                                      >  SRR4302540.2823622/1‑94 (MQ=60)

                                                         GGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGA                                     <  SRR4302540.8016919/94‑1 (MQ=60)

                                                           ACTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATT                                   >  SRR4302540.7331051/1‑94 (MQ=60)

                                                            CTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTT                                  >  SRR4302540.2763122/1‑94 (MQ=60)

                                                            CTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTT                                  >  SRR4302540.7754672/1‑94 (MQ=60)

                                                            CTCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTT                                  >  SRR4302540.929690/1‑94 (MQ=60)

                                                             TCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTT                                 <  SRR4302540.2732719/94‑1 (MQ=60)

                                                             TCTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTT                                 >  SRR4302540.3092724/1‑94 (MQ=60)

                                                              CTGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTC                                >  SRR4302540.5655826/1‑94 (MQ=60)

                                                               TGGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCT                               >  SRR4302540.135587/1‑94 (MQ=60)

                                                                GGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGT                              <  SRR4302540.4348151/94‑1 (MQ=60)

                                                                GGATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGT                              <  SRR4302540.2688200/94‑1 (MQ=60)

                                                                 GATTGTTTTCCCATTCGGTGAAATCGATGCGCGCAATAAGATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTT                             <  SRR4302540.7339317/94‑1 (MQ=60)

                                                                 GATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTT                             >  SRR4302540.8074263/1‑94 (MQ=60)

                                                                 GATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTT                             <  SRR4302540.8046297/94‑1 (MQ=60)

                                                                 GATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTT                             <  SRR4302540.6649993/94‑1 (MQ=60)

                                                                  ATTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTA                            >  SRR4302540.5008174/1‑94 (MQ=60)

                                                                   TTGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAA                           <  SRR4302540.3527461/94‑1 (MQ=60)

                                                                    TGGTTTCCCATTCGGTTAAATCGATGCGCTCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAAC                          <  SRR4302540.8818939/94‑1 (MQ=60)

                                                                    TGGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAAC                          <  SRR4302540.3605213/94‑1 (MQ=60)

                                                                     GGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACG                         >  SRR4302540.6732160/1‑94 (MQ=60)

                                                                     GGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACG                         <  SRR4302540.5132944/94‑1 (MQ=60)

                                                                     GGTTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACG                         >  SRR4302540.8718038/1‑94 (MQ=60)

                                                                       TTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCG                       <  SRR4302540.7428326/94‑1 (MQ=60)

                                                                       TTTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCG                       >  SRR4302540.2896835/1‑94 (MQ=60)

                                                                        TTCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGC                      >  SRR4302540.9433471/1‑94 (MQ=60)

                                                                         TCCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCA                     >  SRR4302540.1994308/1‑94 (MQ=60)

                                                                          CCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCAT                    >  SRR4302540.7583648/1‑94 (MQ=60)

                                                                          CCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCAT                    <  SRR4302540.2142628/94‑1 (MQ=60)

                                                                          CCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCAT                    >  SRR4302540.2205754/1‑94 (MQ=60)

                                                                          CCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCAT                    >  SRR4302540.3036364/1‑94 (MQ=60)

                                                                          CCCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCAT                    >  SRR4302540.4006500/1‑94 (MQ=60)

                                                                           CCATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATA                   >  SRR4302540.5584629/1‑94 (MQ=60)

                                                                             CTTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACT                 <  SRR4302540.5167361/94‑1 (MQ=60)

                                                                             ATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCNANATTTTCGTTAACGCGCATACT                 >  SRR4302540.3639682/1‑94 (MQ=60)

                                                                             ATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACT                 >  SRR4302540.240055/1‑94 (MQ=60)

                                                                             ATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACT                 >  SRR4302540.4992328/1‑94 (MQ=60)

                                                                             ATTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACT                 <  SRR4302540.2482956/94‑1 (MQ=60)

                                                                              TTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTG                <  SRR4302540.7457999/94‑1 (MQ=60)

                                                                              TTCGGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTG                <  SRR4302540.4882183/94‑1 (MQ=60)

                                                                                 GGTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTC             >  SRR4302540.450794/1‑94 (MQ=60)

                                                                                  GTTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCA            >  SRR4302540.5572792/1‑94 (MQ=60)

                                                                                   TTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAG           <  SRR4302540.6076777/94‑1 (MQ=60)

                                                                                   TTAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAG           <  SRR4302540.971155/94‑1 (MQ=60)

                                                                                    TAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGG          >  SRR4302540.6925956/1‑94 (MQ=60)

                                                                                    TAAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGG          <  SRR4302540.7274422/94‑1 (MQ=60)

                                                                                     AAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGT         <  SRR4302540.517267/94‑1 (MQ=60)

                                                                                     AAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGT         <  SRR4302540.1972984/94‑1 (MQ=60)

                                                                                     AAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGT         <  SRR4302540.5764712/94‑1 (MQ=60)

                                                                                     AAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGT         >  SRR4302540.8594601/1‑94 (MQ=60)

                                                                                     AAATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCACATACTGCTCAGGT         >  SRR4302540.4360541/1‑94 (MQ=60)

                                                                                      AATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGTT        <  SRR4302540.2040152/94‑1 (MQ=60)

                                                                                      AATCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGTT        <  SRR4302540.6794761/94‑1 (MQ=60)

                                                                                        TCGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGTTGC      <  SRR4302540.3202657/94‑1 (MQ=60)

                                                                                         CGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGTTGCT     >  SRR4302540.539291/1‑94 (MQ=60)

                                                                                         CGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGTTGCT     >  SRR4302540.7049524/1‑94 (MQ=60)

                                                                                         CGATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGTTGCT     <  SRR4302540.4925352/94‑1 (MQ=60)

                                                                                          GATGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGTTGCTC    >  SRR4302540.1827468/1‑94 (MQ=60)

                                                                                            TGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGTTGCTCAG  >  SRR4302540.1847155/1‑94 (MQ=60)

                                                                                            TGCGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGTTGCTCAG  <  SRR4302540.3490272/94‑1 (MQ=60)

                                                                                            TACGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGTTGCTCAG  <  SRR4302540.9319003/94‑1 (MQ=60)

AAAGAAATCCGCCACTTTGCGCCCTACTCGCCCTTTCAGGAAAGTGAGATAGCGGGTGGACTCTGGATTGGTTTCCCATTCGGTTAAATCGATACGCGCAACAATATCCGCATGATTGATATCAAGATAATGGGTTGGGTTGATGTCGAGATTTTCGTTAACGCGCATACTGCTCAGGTTGCTCAG  >  NC_000913/2281422‑2281607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 5 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`