Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,289,578	G→A	L285L (CTG→TTG)	ccmH ←	CcmH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,289,578	0	G	A	99.4%	1136.9 / NA	315	L285L (CTG→TTG)	ccmH	CcmH
Reads supporting (aligned to +/- strand): ref base G (1/0); major base A (152/160); minor base C (1/1); total (154/161)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 321 total aligned reads displayed.

CGGCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAGCTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCACTGT  >  NC_000913/2289488‑2289667

cgGCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACt                                                                                         <  2:4123862/93‑1 (MQ=255)

  gCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGa                                                                                       >  1:5682903/1‑93 (MQ=255)

  gCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGa                                                                                       >  2:7976062/1‑93 (MQ=255)

  gCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGa                                                                                       >  2:6126408/1‑93 (MQ=255)

    aaCGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACg                                                                                     <  1:259879/93‑1 (MQ=255)

    aaCGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACg                                                                                     <  1:2711373/93‑1 (MQ=255)

     aCGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCACCTGACGt                                                                                    >  1:4047764/1‑93 (MQ=255)

     aCGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGt                                                                                    >  1:4352232/1‑93 (MQ=255)

     aCGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGt                                                                                    >  1:6923636/1‑93 (MQ=255)

      cGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTa                                                                                   <  2:1195643/93‑1 (MQ=255)

       ggCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAg                                                                                  <  2:2012807/93‑1 (MQ=255)

       ggCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATAGTCCGTTCTCACCAACTGACGTAg                                                                                  >  1:640020/1‑93 (MQ=255)

        gCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGc                                                                                 <  2:3998631/93‑1 (MQ=255)

        gCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGc                                                                                 <  1:7332857/93‑1 (MQ=255)

         cTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCa                                                                                <  1:3623699/93‑1 (MQ=255)

         cTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCa                                                                                <  1:9361045/93‑1 (MQ=255)

          ttCTCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAg                                                                               <  2:2955618/93‑1 (MQ=255)

           tCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGt                                                                              <  1:1241614/93‑1 (MQ=255)

           tCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGt                                                                              >  1:8063703/1‑93 (MQ=255)

              ccAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCa                                                                           >  1:2341871/1‑93 (MQ=255)

                aaaTCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCAcc                                                                         <  1:5333145/93‑1 (MQ=255)

                 aaTCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCAccg                                                                        <  1:3077488/93‑1 (MQ=255)

                  aTCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCAccgc                                                                       <  1:373065/93‑1 (MQ=255)

                  aTCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCAccgc                                                                       >  1:5579227/1‑93 (MQ=255)

                     gctgctgctCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGa                                                                    <  1:9229248/93‑1 (MQ=255)

                       tgctgctCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAgg                                                                  >  2:2850125/1‑93 (MQ=255)

                       tgctgctCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAgg                                                                  >  1:10019913/1‑93 (MQ=255)

                        gctgctCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGc                                                                 >  2:3481559/1‑93 (MQ=255)

                           gctCAAAGGCATTAAACGCATACATGCTTAGCACTCGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGt                                                              <  2:8403351/93‑1 (MQ=255)

                           gctCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGt                                                              >  1:8624093/1‑93 (MQ=255)

                               aaaGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTc                                                          <  2:5238737/93‑1 (MQ=255)

                               aaaGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTc                                                          >  2:575387/1‑93 (MQ=255)

                                aaGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCg                                                         <  2:3115687/93‑1 (MQ=255)

                                aaGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCg                                                         >  1:6295190/1‑93 (MQ=255)

                                 aGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGCTGTCGt                                                        <  2:9760691/93‑1 (MQ=255)

                                  ggttttAAACGCATACATGCGTTGTACACGGATATTGCTTTGGTCTGTACGCACTAATTGACTTATCAGTTCACTGCCGAGGCTGTTGTCGtt                                                       >  1:8948275/5‑93 (MQ=255)

                                  ggCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGtt                                                       <  2:8623607/93‑1 (MQ=255)

                                   gCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTg                                                      <  1:9791528/93‑1 (MQ=255)

                                   gCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTg                                                      <  1:6064927/93‑1 (MQ=255)

                                   gCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTg                                                      <  2:5600656/93‑1 (MQ=255)

                                    cATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTgg                                                     >  2:5854202/1‑93 (MQ=255)

                                     aTTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTggg                                                    <  1:6646297/93‑1 (MQ=255)

                                     aTTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGATGTCGTTggg                                                    >  2:1120601/1‑93 (MQ=255)

                                      ttAAGCGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGa                                                   >  2:8033980/1‑93 (MQ=255)

                                        aaaCGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATc                                                 <  1:5732909/93‑1 (MQ=255)

                                        aaaCGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATc                                                 >  2:890547/1‑93 (MQ=255)

                                         aaCGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCa                                                >  1:747206/1‑93 (MQ=255)

                                         aaCGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCa                                                <  1:5181765/93‑1 (MQ=255)

                                          aCGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAg                                               <  1:3189999/93‑1 (MQ=255)

                                           cGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGa                                              >  2:7114090/1‑93 (MQ=255)

                                           cGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGa                                              <  1:1371166/93‑1 (MQ=255)

                                              aTACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGa                                           >  2:7642247/1‑93 (MQ=255)

                                               tACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGaa                                          >  1:1474008/1‑93 (MQ=255)

                                               tACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGaa                                          <  1:5650463/93‑1 (MQ=255)

                                               tACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGaa                                          <  2:9005903/93‑1 (MQ=255)

                                                 cATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGGTGTCGTTGGGGTCCGATGAACg                                        >  2:7508952/1‑93 (MQ=255)

                                                  aTGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGa                                       <  1:4969611/93‑1 (MQ=255)

                                                   tGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAg                                      >  1:3540037/1‑93 (MQ=255)

                                                      ttAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCa                                   <  2:4896419/93‑1 (MQ=255)

                                                      ttAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCa                                   >  2:7856698/1‑93 (MQ=255)

                                                      ttAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCa                                   <  2:6945116/93‑1 (MQ=255)

                                                      ttAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCa                                   <  1:9468215/93‑1 (MQ=255)

                                                       tAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCaa                                  <  2:1317125/93‑1 (MQ=255)

                                                        aGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAAc                                 <  1:1065189/93‑1 (MQ=255)

                                                         gCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACg                                <  1:8701861/93‑1 (MQ=255)

                                                          cacaCGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGc                               <  1:4700750/93‑1 (MQ=255)

                                                           acacGGATATTGCTATGGTCCGTTCTCACCAGCTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCt                              >  1:6970152/1‑93 (MQ=255)

                                                           acacGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCt                              >  2:2121498/1‑93 (MQ=255)

                                                            cacGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCtt                             >  1:4426381/1‑93 (MQ=255)

                                                             acGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTc                            <  2:4405485/93‑1 (MQ=255)

                                                             acGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTc                            <  1:5452020/93‑1 (MQ=255)

                                                             acGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTc                            >  2:9570587/1‑93 (MQ=255)

                                                              cGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCa                           <  1:5081542/93‑1 (MQ=255)

                                                              cGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCa                           <  1:5537525/93‑1 (MQ=255)

                                                               ggATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAg                          >  1:6713198/1‑93 (MQ=255)

                                                                gATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGc                         <  1:1813220/93‑1 (MQ=255)

                                                                 atatTTGTATGGTCCGTTCTCACCAACTGACGTAGCAGGTCCCCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCg                        <  1:1123498/93‑1 (MQ=255)

                                                                 atatTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCg                        <  2:3012362/93‑1 (MQ=255)

                                                                  tatTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGt                       >  2:6805199/1‑93 (MQ=255)

                                                                  tatTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGt                       >  1:1887125/1‑93 (MQ=255)

                                                                  tatTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGt                       >  2:1683834/1‑93 (MQ=255)

                                                                   atTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTa                      >  2:9165415/1‑93 (MQ=255)

                                                                    ttGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTAt                     <  2:1544622/93‑1 (MQ=255)

                                                                        tATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCa                 <  2:728156/93‑1 (MQ=255)

                                                                        tATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCa                 <  1:4844338/93‑1 (MQ=255)

                                                                         aTGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAg                <  1:9555327/93‑1 (MQ=255)

                                                                         aTGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAg                <  2:4603368/93‑1 (MQ=255)

                                                                         aTGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAg                <  1:9917474/93‑1 (MQ=255)

                                                                          tGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGt               >  2:9643083/1‑93 (MQ=255)

                                                                          tGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGt               >  1:3929098/1‑93 (MQ=255)

                                                                          tGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGt               >  2:3875155/1‑93 (MQ=255)

                                                                           ggTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTg              <  1:2115940/93‑1 (MQ=255)

                                                                             cccGTTCGCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTGGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTgca            <  2:7074058/92‑1 (MQ=255)

                                                                                gtcctcACCACCTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTgcagca         <  2:10037587/90‑1 (MQ=255)

                                                                                gTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTgcagca         <  1:380470/93‑1 (MQ=255)

                                                                                gTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTgcagca         <  2:8297994/93‑1 (MQ=255)

                                                                                gTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTgcagca         >  2:5211361/1‑93 (MQ=255)

                                                                                 ttCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCAt        <  1:8324214/93‑1 (MQ=255)

                                                                                  tctcACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATc       <  2:3709494/93‑1 (MQ=255)

                                                                                   ctcACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCa      <  2:5061291/93‑1 (MQ=255)

CGGCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAGCTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCACTGT  >  NC_000913/2289488‑2289667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGCGGCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAGCTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCACTGTTTTT  >  NC_000913/2289486‑2289671

CGCGGCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAAC                                                                                              >  SRR4302540.195150/1‑94 (MQ=60)

 GCGGCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACT                                                                                             <  SRR4302540.7999627/94‑1 (MQ=60)

  CGGCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTG                                                                                            <  SRR4302540.5992779/94‑1 (MQ=60)

  CGGCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTG                                                                                            >  SRR4302540.9438749/1‑94 (MQ=60)

   GGCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGA                                                                                           >  SRR4302540.5745471/1‑94 (MQ=60)

   GGCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGA                                                                                           >  SRR4302540.5745472/1‑94 (MQ=60)

    GCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGAC                                                                                          >  SRR4302540.8312000/1‑94 (MQ=60)

      AACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCACCTGACGT                                                                                        >  SRR4302540.4091408/1‑94 (MQ=60)

      AACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGT                                                                                        >  SRR4302540.7000685/1‑94 (MQ=60)

      AACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGT                                                                                        <  SRR4302540.2740610/94‑1 (MQ=60)

      AACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGT                                                                                        >  SRR4302540.7000686/1‑94 (MQ=60)

      AACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGT                                                                                        >  SRR4302540.8104418/1‑94 (MQ=60)

      AACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGT                                                                                        >  SRR4302540.4399575/1‑94 (MQ=60)

      AACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGT                                                                                        <  SRR4302540.262407/94‑1 (MQ=60)

       ACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTA                                                                                       <  SRR4302540.2718111/94‑1 (MQ=60)

        CGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAG                                                                                      <  SRR4302540.9131050/94‑1 (MQ=60)

        CGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAG                                                                                      <  SRR4302540.2102712/94‑1 (MQ=60)

        CGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAG                                                                                      <  SRR4302540.358936/94‑1 (MQ=60)

        CGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATAGTCCGTTCTCACCAACTGACGTAG                                                                                      >  SRR4302540.646838/1‑94 (MQ=60)

         GGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGC                                                                                     >  SRR4302540.7146164/1‑94 (MQ=60)

          GCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCA                                                                                    <  SRR4302540.4022795/94‑1 (MQ=60)

          GCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCA                                                                                    <  SRR4302540.7414710/94‑1 (MQ=60)

           CTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAG                                                                                   <  SRR4302540.5771622/94‑1 (MQ=60)

           CTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAG                                                                                   <  SRR4302540.2697693/94‑1 (MQ=60)

           CTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAG                                                                                   <  SRR4302540.9472525/94‑1 (MQ=60)

           CTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAG                                                                                   <  SRR4302540.3663354/94‑1 (MQ=60)

            TTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGT                                                                                  >  SRR4302540.8157291/1‑94 (MQ=60)

             TCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTT                                                                                 <  SRR4302540.1254284/94‑1 (MQ=60)

             TCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTT                                                                                 <  SRR4302540.9759953/94‑1 (MQ=60)

              CGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTC                                                                                <  SRR4302540.5383600/94‑1 (MQ=60)

               GCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCA                                                                               >  SRR4302540.2367104/1‑94 (MQ=60)

               GCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCA                                                                               >  SRR4302540.4463722/1‑94 (MQ=60)

               GCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCA                                                                               <  SRR4302540.4114344/94‑1 (MQ=60)

                 CAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACC                                                                             <  SRR4302540.3145508/94‑1 (MQ=60)

                 CAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACC                                                                             >  SRR4302540.1885052/1‑94 (MQ=60)

                 CAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACC                                                                             <  SRR4302540.2847710/94‑1 (MQ=60)

                 CAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACC                                                                             <  SRR4302540.3595742/94‑1 (MQ=60)

                  AAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCG                                                                            >  SRR4302540.7809703/1‑94 (MQ=60)

                  AAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCG                                                                            <  SRR4302540.5391592/94‑1 (MQ=60)

                  AAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCG                                                                            >  SRR4302540.4647539/1‑94 (MQ=60)

                  AAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGCTCTCACCAACTGACGTAGCAGTTCACCG                                                                            >  SRR4302540.4985180/1‑94 (MQ=60)

                   AATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGC                                                                           >  SRR4302540.9446802/1‑94 (MQ=60)

                   AATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGC                                                                           <  SRR4302540.3111250/94‑1 (MQ=60)

                   AATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGC                                                                           >  SRR4302540.5640638/1‑94 (MQ=60)

                   AATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGC                                                                           >  SRR4302540.6436957/1‑94 (MQ=60)

                    ATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCC                                                                          <  SRR4302540.376920/94‑1 (MQ=60)

                       GCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAG                                                                       <  SRR4302540.112969/94‑1 (MQ=60)

                       GCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAG                                                                       <  SRR4302540.9339883/94‑1 (MQ=60)

                        CTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGG                                                                      >  SRR4302540.10021851/1‑94 (MQ=60)

                        CTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGG                                                                      <  SRR4302540.7508177/94‑1 (MQ=60)

                        CTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGG                                                                      <  SRR4302540.1116382/94‑1 (MQ=60)

                        CTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGG                                                                      >  SRR4302540.10136529/1‑94 (MQ=60)

                        CTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGC                                                                      >  SRR4302540.5561711/1‑94 (MQ=60)

                         TGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGC                                                                     >  SRR4302540.3370485/1‑94 (MQ=60)

                         TGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGC                                                                     <  SRR4302540.1416009/94‑1 (MQ=60)

                         TGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGC                                                                     <  SRR4302540.1416007/94‑1 (MQ=60)

                         TGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGC                                                                     >  SRR4302540.3730147/1‑94 (MQ=60)

                          GCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCG                                                                    <  SRR4302540.5118670/94‑1 (MQ=60)

                          GCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCG                                                                    >  SRR4302540.6533779/1‑94 (MQ=60)

                           CTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGG                                                                   >  SRR4302540.985467/1‑94 (MQ=60)

                            TGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGT                                                                  >  SRR4302540.8724273/1‑94 (MQ=60)

                              CTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTG                                                                >  SRR4302540.3080990/1‑94 (MQ=60)

                               TCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGT                                                               >  SRR4302540.5197864/1‑94 (MQ=60)

                               TCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGT                                                               <  SRR4302540.3940365/94‑1 (MQ=60)

                               TCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGT                                                               >  SRR4302540.2353046/1‑94 (MQ=60)

                               TCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGT                                                               >  SRR4302540.6287248/1‑94 (MQ=60)

                                CAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTC                                                              >  SRR4302540.5290324/1‑94 (MQ=60)

                                 AAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCG                                                             >  SRR4302540.6365281/1‑94 (MQ=60)

                                  AAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGT                                                            >  SRR4302540.3827142/1‑94 (MQ=60)

                                     GCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGG                                                         <  SRR4302540.6132352/94‑1 (MQ=60)

                                     GCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGG                                                         <  SRR4302540.9906226/94‑1 (MQ=60)

                                     GCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGG                                                         >  SRR4302540.1036657/1‑94 (MQ=60)

                                      CATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGG                                                        <  SRR4302540.61465/94‑1 (MQ=60)

                                      CATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGG                                                        <  SRR4302540.3630287/94‑1 (MQ=60)

                                       ATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGG                                                       >  SRR4302540.5658501/1‑94 (MQ=60)

                                       ATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGA                                                       <  SRR4302540.6719829/94‑1 (MQ=60)

                                       ATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGA                                                       >  SRR4302540.5930977/1‑94 (MQ=60)

                                       ATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGA                                                       <  SRR4302540.3836136/94‑1 (MQ=60)

                                        TTAAACGCATACATGCTTCGCACACGGATATTGCTATGGTCGGTTCTCACCAACTGACGAGGCAGTTCACGGTCGAGGCGGTTGTCGTTGGGAG                                                      >  SRR4302540.646293/1‑94 (MQ=60)

                                        TTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCCGTTCACAGCCGAGGCGGTTGGCGTTGGGAT                                                      >  SRR4302540.2488891/1‑94 (MQ=60)

                                        TTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGAT                                                      <  SRR4302540.1587679/94‑1 (MQ=60)

                                        TTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGAT                                                      <  SRR4302540.2166092/94‑1 (MQ=60)

                                        TTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGAT                                                      >  SRR4302540.6747356/1‑94 (MQ=60)

                                          AAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCA                                                    <  SRR4302540.1384107/94‑1 (MQ=60)

                                          AAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCA                                                    <  SRR4302540.5796056/94‑1 (MQ=60)

                                          AAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCA                                                    >  SRR4302540.755167/1‑94 (MQ=60)

                                          AAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCA                                                    <  SRR4302540.6754790/94‑1 (MQ=60)

                                           AACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAG                                                   <  SRR4302540.563882/94‑1 (MQ=60)

                                           AACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAG                                                   <  SRR4302540.10024911/94‑1 (MQ=60)

                                           AACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAG                                                   <  SRR4302540.4461384/94‑1 (MQ=60)

                                           AACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAG                                                   <  SRR4302540.5238172/94‑1 (MQ=60)

                                            ACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGA                                                  <  SRR4302540.3224653/94‑1 (MQ=60)

                                             CGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGAT                                                 <  SRR4302540.1385696/94‑1 (MQ=60)

                                             CGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGAT                                                 <  SRR4302540.5600185/94‑1 (MQ=60)

                                             CGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGAT                                                 <  SRR4302540.8532593/94‑1 (MQ=60)

                                              GCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATG                                                >  SRR4302540.6886868/1‑94 (MQ=60)

                                              GCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATG                                                >  SRR4302540.7478038/1‑94 (MQ=60)

                                                ATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAA                                              >  SRR4302540.7132348/1‑94 (MQ=60)

                                                ATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAA                                              >  SRR4302540.1490126/1‑94 (MQ=60)

                                                 TACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAAC                                             <  SRR4302540.5712672/94‑1 (MQ=60)

                                                  ACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACG                                            >  SRR4302540.5060888/1‑94 (MQ=60)

                                                   CATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGA                                           <  SRR4302540.6435452/94‑1 (MQ=60)

                                                    ATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAG                                          <  SRR4302540.8744331/94‑1 (MQ=60)

                                                    ATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAG                                          >  SRR4302540.3578699/1‑94 (MQ=60)

                                                    ATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAG                                          <  SRR4302540.5023382/94‑1 (MQ=60)

                                                    ATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAG                                          <  SRR4302540.438610/94‑1 (MQ=60)

                                                    ATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTGCACCGCCGAGGCGGTGGTCGTTGGGATCAGATGAACGAG                                          <  SRR4302540.5023381/94‑1 (MQ=60)

                                                     TGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGT                                         <  SRR4302540.9947958/94‑1 (MQ=60)

                                                      GCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTC                                        >  SRR4302540.9511114/1‑94 (MQ=60)

                                                       CTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCA                                       <  SRR4302540.1426464/94‑1 (MQ=60)

                                                       CTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCA                                       >  SRR4302540.6952338/1‑94 (MQ=60)

                                                       CTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCA                                       >  SRR4302540.557786/1‑94 (MQ=60)

                                                        TTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAA                                      <  SRR4302540.9580528/94‑1 (MQ=60)

                                                        TTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAA                                      <  SRR4302540.9580529/94‑1 (MQ=60)

                                                         TAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAAC                                     <  SRR4302540.6561263/94‑1 (MQ=60)

                                                          AGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACG                                    <  SRR4302540.1076040/94‑1 (MQ=60)

                                                           GCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGC                                   <  SRR4302540.8802869/94‑1 (MQ=60)

                                                            CACACGGATATTGCTATGGTCCGTTCTCACCAGCTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCT                                  >  SRR4302540.7047633/1‑94 (MQ=60)

                                                            CACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCT                                  >  SRR4302540.5670103/1‑94 (MQ=60)

                                                            CACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCT                                  <  SRR4302540.4750990/94‑1 (MQ=60)

                                                             ACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTT                                 >  SRR4302540.1873926/1‑94 (MQ=60)

                                                             ACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTT                                 >  SRR4302540.4474335/1‑94 (MQ=60)

                                                              CACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTC                                >  SRR4302540.7005607/1‑94 (MQ=60)

                                                              CACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTC                                >  SRR4302540.7005330/1‑94 (MQ=60)

                                                              CACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTC                                >  SRR4302540.558618/1‑94 (MQ=60)

                                                               ACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCA                               <  SRR4302540.5512022/94‑1 (MQ=60)

                                                               ACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCA                               <  SRR4302540.5734065/94‑1 (MQ=60)

                                                               ACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCA                               <  SRR4302540.5734066/94‑1 (MQ=60)

                                                                CGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAG                              >  SRR4302540.6787277/1‑94 (MQ=60)

                                                                CGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAG                              <  SRR4302540.5598517/94‑1 (MQ=60)

                                                                CGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAG                              <  SRR4302540.5136483/94‑1 (MQ=60)

                                                                 GGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGGCAACGCTTCTGC                             >  SRR4302540.8744463/1‑94 (MQ=60)

                                                                  GATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCG                            <  SRR4302540.1833012/94‑1 (MQ=60)

                                                                  GATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCG                            <  SRR4302540.4555233/94‑1 (MQ=60)

                                                                  GATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCG                            <  SRR4302540.4985667/94‑1 (MQ=60)

                                                                   ATATTTGTATGGTCCGTTCTCACCAACTGACGTAGCAGGTCCCCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGT                           <  SRR4302540.1135176/94‑1 (MQ=60)

                                                                   ATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGT                           >  SRR4302540.2435217/1‑94 (MQ=60)

                                                                   ATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGT                           >  SRR4302540.1907786/1‑94 (MQ=60)

                                                                   ATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGT                           >  SRR4302540.3668595/1‑94 (MQ=60)

                                                                   ATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGT                           >  SRR4302540.9139601/1‑94 (MQ=60)

                                                                   ATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGT                           <  SRR4302540.1135177/94‑1 (MQ=60)

                                                                    TATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTA                          <  SRR4302540.1596872/94‑1 (MQ=60)

                                                                    TATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTA                          >  SRR4302540.2469292/1‑94 (MQ=60)

                                                                    TATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTA                          >  SRR4302540.4038541/1‑94 (MQ=60)

                                                                     ATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTAT                         >  SRR4302540.4376846/1‑94 (MQ=60)

                                                                      TTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATC                        >  SRR4302540.6073104/1‑94 (MQ=60)

                                                                      TTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATC                        >  SRR4302540.4776494/1‑94 (MQ=60)

                                                                       TGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCC                       <  SRR4302540.5445843/94‑1 (MQ=60)

                                                                       TGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCC                       >  SRR4302540.3400636/1‑94 (MQ=60)

                                                                        GCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCC                      <  SRR4302540.1185013/94‑1 (MQ=60)

                                                                         CTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCA                     >  SRR4302540.7885618/1‑94 (MQ=60)

                                                                         CTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCA                     >  SRR4302540.10145060/1‑94 (MQ=60)

                                                                         CTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCA                     <  SRR4302540.1928207/94‑1 (MQ=60)

                                                                          TATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAG                    <  SRR4302540.4896231/94‑1 (MQ=60)

                                                                          TATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAG                    >  SRR4302540.1256365/1‑94 (MQ=60)

                                                                           ATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGT                   <  SRR4302540.9668327/94‑1 (MQ=60)

                                                                           ATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGT                   <  SRR4302540.10033294/94‑1 (MQ=60)

                                                                           ATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGT                   >  SRR4302540.3971594/1‑94 (MQ=60)

                                                                             GGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGC                 <  SRR4302540.2138652/94‑1 (MQ=60)

                                                                              GTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCA                <  SRR4302540.4843363/94‑1 (MQ=60)

                                                                              GTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCA                >  SRR4302540.9298579/1‑94 (MQ=60)

                                                                              GTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCA                >  SRR4302540.5212288/1‑94 (MQ=60)

                                                                              GTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCA                >  SRR4302540.8722205/1‑94 (MQ=60)

                                                                              GTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCA                >  SRR4302540.820164/1‑94 (MQ=60)

                                                                                 CGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCA             <  SRR4302540.8960034/94‑1 (MQ=60)

                                                                                 CGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCA             <  SRR4302540.8960032/94‑1 (MQ=60)

                                                                                 CGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCA             >  SRR4302540.3935388/1‑94 (MQ=60)

                                                                                 CGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCA             <  SRR4302540.3138035/94‑1 (MQ=60)

                                                                                  GTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCAT            <  SRR4302540.384410/94‑1 (MQ=60)

                                                                                   TTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATC           <  SRR4302540.8420827/94‑1 (MQ=60)

                                                                                    TCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCA          <  SRR4302540.5458798/94‑1 (MQ=60)

                                                                                    TCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCA          <  SRR4302540.9664462/94‑1 (MQ=60)

                                                                                        ACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTGACAGCTTCAGCGTATCCCAGTGCAGCATCACTGT      >  SRR4302540.9603208/1‑94 (MQ=60)

                                                                                          CAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCACTGTTT    >  SRR4302540.1967918/1‑94 (MQ=60)

                                                                                           AACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCACTGTTTT   >  SRR4302540.6343281/1‑94 (MQ=60)

                                                                                           AACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCACTGTTTT   <  SRR4302540.9758919/94‑1 (MQ=60)

                                                                                            ACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCACTGTTTTT  <  SRR4302540.6533884/94‑1 (MQ=60)

                                                                                            ACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCACTGTTTTT  <  SRR4302540.829621/94‑1 (MQ=60)

CGCGGCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAGCTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCACTGTTTTT  >  NC_000913/2289486‑2289671

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`