Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,311,335	(T)_5→4	intergenic (‑566/‑173)	ompC ← / → yojN	outer membrane protein 1b (Ib;c)/putative 2‑component sensor protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,311,331	0	T	.	99.8%	2051.9 / ‑3.9	450	intergenic (‑562/‑177)	ompC/yojN	outer membrane protein 1b (Ib;c)/putative 2‑component sensor protein
Reads supporting (aligned to +/- strand): ref base T (1/0); major base . (215/233); minor base G (0/1); total (216/234)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 516 total aligned reads displayed.

AAAACTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCTTTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAAT  >  NC_000913/2311239‑2311419

aaaaCTATAACGCTTGTTAACTATTTCCCAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCt                                                                                          <  1:5145927/93‑1 (MQ=255)

aaaaCTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATCATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGTGCt                                                                                          >  1:7900258/1‑93 (MQ=255)

aaaaCTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCt                                                                                          <  1:777265/93‑1 (MQ=255)

aaaaCTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCt                                                                                          >  1:6449600/1‑93 (MQ=255)

aaaaCTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCt                                                                                          >  2:7535493/1‑93 (MQ=255)

 aaaCTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCtt                                                                                         <  1:6048004/93‑1 (MQ=255)

 aaaCTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCtt                                                                                         >  2:9678555/1‑93 (MQ=255)

  aaCTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCttt                                                                                        <  1:2361088/93‑1 (MQ=255)

   aCTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCtttt                                                                                       >  1:6324973/1‑93 (MQ=255)

   aCTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCtttt                                                                                       >  1:2875861/1‑93 (MQ=255)

   aCTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCtttt                                                                                       <  1:5506175/93‑1 (MQ=255)

    cTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCttttg                                                                                      <  2:2143758/93‑2 (MQ=255)

     tataACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCttttgt                                                                                     >  2:2464747/1‑91 (MQ=255)

      ataACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCttttgta                                                                                    <  2:7063911/93‑4 (MQ=255)

       taACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCttttgtag                                                                                   <  2:3659907/93‑5 (MQ=255)

        aaCGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAgg                                                                                 <  1:10015974/93‑1 (MQ=255)

        aaCGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAgg                                                                                 >  1:9140166/1‑93 (MQ=255)

           gCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTa                                                                              <  2:4709363/93‑1 (MQ=255)

           gCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTa                                                                              <  1:7062072/93‑1 (MQ=255)

           gCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTa                                                                              >  1:6880952/1‑93 (MQ=255)

            cTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTAt                                                                             >  1:4558412/1‑93 (MQ=255)

            cTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTAt                                                                             <  1:5040473/93‑1 (MQ=255)

            cTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTAt                                                                             >  1:7536672/1‑93 (MQ=255)

             ttGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTAtt                                                                            <  1:3837843/93‑1 (MQ=255)

             ttGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTAtt                                                                            <  1:1644255/93‑1 (MQ=255)

              tGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTAttt                                                                           >  1:4192306/1‑93 (MQ=255)

              tGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTAttt                                                                           >  2:270624/1‑93 (MQ=255)

              tGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTAttt                                                                           >  2:6349491/1‑93 (MQ=255)

                   aCTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACa                                                                      >  1:5783093/1‑93 (MQ=255)

                    cTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAg                                                                     >  2:1050881/1‑93 (MQ=255)

                     tATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGc                                                                    >  2:4802810/1‑93 (MQ=255)

                     tATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGc                                                                    <  2:432393/93‑1 (MQ=255)

                      aTTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCa                                                                   >  1:1436109/1‑93 (MQ=255)

                       tttCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCaa                                                                  >  2:4604131/1‑93 (MQ=255)

                         tCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCaaaa                                                                >  2:9523044/1‑93 (MQ=255)

                         tCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCaaaa                                                                <  2:3308932/93‑1 (MQ=255)

                         tCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCaaaa                                                                <  1:4310289/93‑1 (MQ=255)

                         tCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCaaaa                                                                <  2:5277664/93‑1 (MQ=255)

                         tCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCaaaa                                                                <  2:1318865/93‑1 (MQ=255)

                         tCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCaaaa                                                                <  2:9152111/93‑1 (MQ=255)

                         tCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCaaaa                                                                >  1:1884012/1‑93 (MQ=255)

                         tCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCaaaa                                                                <  2:1724208/93‑1 (MQ=255)

                         tCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCaaaa                                                                <  2:5983275/93‑1 (MQ=255)

                          cacaAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAAt                                                               <  2:9299361/93‑1 (MQ=255)

                           acaAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATg                                                              <  1:6133772/93‑1 (MQ=255)

                            caAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATgg                                                             <  2:2227088/93‑1 (MQ=255)

                             aaaTAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGgc                                                            >  1:9498224/1‑93 (MQ=255)

                             aaaTAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGgc                                                            <  2:7949281/93‑1 (MQ=255)

                              aataatTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGgcg                                                           >  2:1206962/1‑93 (MQ=255)

                                taatTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCt                                                         <  2:3247067/93‑1 (MQ=255)

                                  atTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTg                                                       <  2:6864487/93‑1 (MQ=255)

                                    tAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTa                                                     >  2:4464441/1‑93 (MQ=255)

                                     aaCATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTAc                                                    <  2:9447785/93‑1 (MQ=255)

                                        aTCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATc                                                 <  1:8380217/93‑1 (MQ=255)

                                        aTCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATc                                                 >  1:5878574/1‑93 (MQ=255)

                                         tCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCt                                                >  1:4989631/1‑93 (MQ=255)

                                          ccGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTa                                               >  1:8251076/1‑93 (MQ=255)

                                          ccGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTa                                               <  1:8038692/93‑1 (MQ=255)

                                          ccGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTa                                               <  1:6219321/93‑1 (MQ=255)

                                           cGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTAt                                              <  2:6537350/93‑1 (MQ=255)

                                           cGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTAt                                              <  2:3847376/93‑1 (MQ=255)

                                             cATAATTTCGAGCAATCTTTGTTTATTTGCAAGTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTTCATCTAttt                                            <  2:6234990/93‑1 (MQ=255)

                                             cATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTAttt                                            <  2:9816994/93‑1 (MQ=255)

                                              aTAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTc                                           >  1:3058001/1‑93 (MQ=255)

                                              aTAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTc                                           <  2:8241859/93‑1 (MQ=255)

                                               tAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTcc                                          <  1:8752718/93‑1 (MQ=255)

                                                 aTTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTcccc                                        <  1:736139/93‑1 (MQ=255)

                                                 aTTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTcccc                                        >  2:6152643/1‑93 (MQ=255)

                                                    tCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCaa                                     <  1:3718235/93‑1 (MQ=255)

                                                      cAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATg                                   >  2:2998390/1‑93 (MQ=255)

                                                       aGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGc                                  >  1:4694083/1‑93 (MQ=255)

                                                         cAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAACATGGCGCTTGTACATCTATTTCCCCCACTgacg                                >  1:5972903/1‑90 (MQ=255)

                                                          aaTCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAgg                               <  2:7747296/93‑1 (MQ=255)

                                                           aTCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGga                              >  1:7951269/1‑93 (MQ=255)

                                                              tttGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGgatga                           <  1:5275636/93‑1 (MQ=255)

                                                              tttGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGgatga                           >  1:8601928/1‑93 (MQ=255)

                                                                tGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATa                         >  2:2823546/1‑93 (MQ=255)

                                                                 gTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATaa                        >  2:5162178/1‑93 (MQ=255)

                                                                 gTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATaa                        <  1:722826/93‑1 (MQ=255)

                                                                   ttATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAat                      <  1:1289864/93‑1 (MQ=255)

                                                                   ttATTTGCAATTATTTTTGTTAGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAat                      <  1:2703294/93‑1 (MQ=255)

                                                                    tATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAata                     >  2:8422982/1‑93 (MQ=255)

                                                                    tATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAata                     <  1:2155554/93‑1 (MQ=255)

                                                                     aTTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAatat                    <  2:4021558/93‑1 (MQ=255)

                                                                      tttGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAatata                   >  1:3278929/1‑92 (MQ=255)

                                                                       ttGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCa                  <  1:9951321/93‑1 (MQ=255)

                                                                        tGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCAc                 >  1:4445328/1‑93 (MQ=255)

                                                                         gCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGCTGATAAATATCACg                >  1:3465295/1‑93 (MQ=255)

                                                                         gCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACg                <  2:6655936/93‑1 (MQ=255)

                                                                           aaTTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACggg              >  2:8793726/1‑93 (MQ=255)

                                                                            attattTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGga             <  2:8890566/93‑1 (MQ=255)

                                                                            attattTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGga             <  2:1447190/93‑1 (MQ=255)

                                                                            attattTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGga             <  1:6750399/93‑1 (MQ=255)

                                                                             ttattTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGgag            >  2:5775112/1‑93 (MQ=255)

                                                                              tattTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGgaga           <  2:5058182/93‑1 (MQ=255)

                                                                              tattTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGgaga           >  2:872169/1‑93 (MQ=255)

                                                                                tttttGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCTCCCAATGCAGGATGATAAATATCACGGGAGAAt         >  1:9671973/1‑93 (MQ=255)

                                                                                  tttGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATag       >  1:1073998/1‑93 (MQ=255)

                                                                                   ttgttgGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATaga      >  2:1539904/1‑93 (MQ=255)

                                                                                       tgGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAat  <  2:5590929/93‑1 (MQ=255)

AAAACTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCTTTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAAT  >  NC_000913/2311239‑2311419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 262 total aligned reads displayed.

ACTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCTTTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCA  >  NC_000913/2311242‑2311428

ACTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTNCNNTTATTTTTGTTGNGCTTNTN                                                                                               >  SRR4302540.2353467/1‑94 (MQ=60)

ACTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCTTTTG                                                                                               <  SRR4302540.5566815/94‑1 (MQ=60)

ACTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCTTTTG                                                                                               <  SRR4302540.7593228/94‑1 (MQ=60)

  TATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTA                                                                                            >  SRR4302540.6166933/1‑94 (MQ=60)

  TATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTA                                                                                            >  SRR4302540.7311927/1‑94 (MQ=60)

   ATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAG                                                                                           <  SRR4302540.3886601/94‑1 (MQ=60)

    TAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGG                                                                                          >  SRR4302540.4347691/1‑94 (MQ=60)

    TAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGG                                                                                          >  SRR4302540.3589779/1‑94 (MQ=60)

    TAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGG                                                                                          <  SRR4302540.5052773/94‑1 (MQ=60)

    TAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGG                                                                                          <  SRR4302540.6422560/94‑1 (MQ=60)

    TAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGG                                                                                          <  SRR4302540.8720382/94‑1 (MQ=60)

     AACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGT                                                                                         <  SRR4302540.8367930/94‑1 (MQ=60)

     AACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGT                                                                                         >  SRR4302540.4046396/1‑94 (MQ=60)

       CGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCATTCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTA                                                                                       <  SRR4302540.3374897/94‑1 (MQ=60)

       CGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTA                                                                                       >  SRR4302540.6957228/1‑94 (MQ=60)

        GCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTAT                                                                                      >  SRR4302540.7621086/1‑94 (MQ=60)

        GCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTAT                                                                                      >  SRR4302540.3087912/1‑94 (MQ=60)

        GCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTAT                                                                                      >  SRR4302540.4607679/1‑94 (MQ=60)

        GCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTAT                                                                                      >  SRR4302540.7317814/1‑94 (MQ=60)

         CTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGGAATCTTTGTTTATTTGCAATTATGTTTGTTGGGC‑TTTTGTAGGTTATT                                                                                     <  SRR4302540.8853963/94‑1 (MQ=60)

         CTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATT                                                                                     <  SRR4302540.5094995/94‑1 (MQ=60)

         CTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATT                                                                                     >  SRR4302540.9382912/1‑94 (MQ=60)

          TTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTT                                                                                    >  SRR4302540.4237906/1‑94 (MQ=60)

          TTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTT                                                                                    >  SRR4302540.7702736/1‑94 (MQ=60)

          TTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTT                                                                                    <  SRR4302540.3879584/94‑1 (MQ=60)

          TTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTT                                                                                    <  SRR4302540.6119403/94‑1 (MQ=60)

          TTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTT                                                                                    <  SRR4302540.1662215/94‑1 (MQ=60)

          TTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTT                                                                                    <  SRR4302540.9259246/94‑1 (MQ=60)

           TGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTG                                                                                   <  SRR4302540.4581470/94‑1 (MQ=60)

           TGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTG                                                                                   >  SRR4302540.3152236/1‑94 (MQ=60)

            GTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGT                                                                                  >  SRR4302540.6234702/1‑94 (MQ=60)

            GTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGT                                                                                  <  SRR4302540.7389082/94‑1 (MQ=60)

             TTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTA                                                                                 >  SRR4302540.795018/1‑94 (MQ=60)

              TAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTAC                                                                                >  SRR4302540.63678/1‑94 (MQ=60)

               tactatttaaaagatatgTAACATCCGCATAATTTCCAGCCATCGGTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACA                                                                               <  SRR4302540.3546944/76‑1 (MQ=60)

               AACTATTTCACAAATAATTATCATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACA                                                                               <  SRR4302540.1032226/94‑1 (MQ=60)

               AACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACA                                                                               >  SRR4302540.5846975/1‑94 (MQ=60)

               AACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACA                                                                               >  SRR4302540.8157470/1‑94 (MQ=60)

               AACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACA                                                                               >  SRR4302540.5846974/1‑94 (MQ=60)

               AACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACA                                                                               >  SRR4302540.6900125/1‑94 (MQ=60)

               AACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACA                                                                               <  SRR4302540.197105/94‑1 (MQ=60)

                ACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAG                                                                              <  SRR4302540.1418785/94‑1 (MQ=60)

                 CTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGC                                                                             >  SRR4302540.2040705/1‑94 (MQ=60)

                  TATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCA                                                                            <  SRR4302540.4389312/94‑1 (MQ=60)

                  TATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCA                                                                            >  SRR4302540.9022754/1‑94 (MQ=60)

                  TATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCA                                                                            >  SRR4302540.1451684/1‑94 (MQ=60)

                  TATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCA                                                                            >  SRR4302540.6955398/1‑94 (MQ=60)

                     TTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAA                                                                         <  SRR4302540.1304550/94‑1 (MQ=60)

                      TCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAAT                                                                        <  SRR4302540.1890236/94‑1 (MQ=60)

                      TCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAAT                                                                        <  SRR4302540.5314106/94‑1 (MQ=60)

                      TCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAAT                                                                        <  SRR4302540.558784/94‑1 (MQ=60)

                      TCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAAT                                                                        <  SRR4302540.5957197/94‑1 (MQ=60)

                      TCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAAT                                                                        <  SRR4302540.8472428/94‑1 (MQ=60)

                      TCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAAT                                                                        <  SRR4302540.3606082/94‑1 (MQ=60)

                      TCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAAT                                                                        <  SRR4302540.8472430/94‑1 (MQ=60)

                       CACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATG                                                                       <  SRR4302540.3875381/94‑1 (MQ=60)

                        ACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGG                                                                      <  SRR4302540.5948933/94‑1 (MQ=60)

                        ACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGG                                                                      <  SRR4302540.9174616/94‑1 (MQ=60)

                        ACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGG                                                                      <  SRR4302540.6202090/94‑1 (MQ=60)

                        ACAAATAATTAACAGCCGCATAATTTCCAGCAATCTTTGTGTATTTGCAGTTATTTTTGTTGGGC‑TATTGTAGGTTATTTGTACAGCAAAATGG                                                                      <  SRR4302540.5948934/94‑1 (MQ=60)

                         CAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGC                                                                     <  SRR4302540.993572/94‑1 (MQ=60)

                         CAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGC                                                                     >  SRR4302540.9610783/1‑94 (MQ=60)

                         CAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGC                                                                     <  SRR4302540.8112644/94‑1 (MQ=60)

                           AATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGC                                                                   >  SRR4302540.6652643/1‑94 (MQ=60)

                            ATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCT                                                                  >  SRR4302540.4379841/1‑94 (MQ=60)

                            ATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCT                                                                  >  SRR4302540.3396929/1‑94 (MQ=60)

                            ATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTGTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCT                                                                  <  SRR4302540.5444150/94‑1 (MQ=60)

                            ATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATCTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCT                                                                  >  SRR4302540.2183788/1‑94 (MQ=60)

                             TAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTT                                                                 <  SRR4302540.4523815/94‑1 (MQ=60)

                              AATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTG                                                                >  SRR4302540.8157292/1‑94 (MQ=60)

                               ATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGT                                                               <  SRR4302540.2252983/94‑1 (MQ=60)

                               ATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGT                                                               <  SRR4302540.2783517/94‑1 (MQ=60)

                               ATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGT                                                               >  SRR4302540.4880737/1‑94 (MQ=60)

                                TTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTA                                                              <  SRR4302540.799042/94‑1 (MQ=60)

                                TTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTA                                                              <  SRR4302540.9476286/94‑1 (MQ=60)

                                TTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTA                                                              >  SRR4302540.8082640/1‑94 (MQ=60)

                                 TAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTAC                                                             <  SRR4302540.4577806/94‑1 (MQ=60)

                                 TAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTAC                                                             <  SRR4302540.4950058/94‑1 (MQ=60)

                                  AACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCACAATGGCGCTTGTACA                                                            >  SRR4302540.593036/1‑94 (MQ=60)

                                  AACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGGGCTTGTACA                                                            >  SRR4302540.7575563/1‑94 (MQ=60)

                                  AACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACA                                                            >  SRR4302540.593035/1‑94 (MQ=60)

                                  AACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACA                                                            >  SRR4302540.2867158/1‑94 (MQ=60)

                                  AACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACA                                                            <  SRR4302540.8545681/94‑1 (MQ=60)

                                   ACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACAT                                                           <  SRR4302540.8628969/94‑1 (MQ=60)

                                   ACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACAT                                                           <  SRR4302540.2662275/94‑1 (MQ=60)

                                    CATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATC                                                          >  SRR4302540.211472/1‑94 (MQ=60)

                                     ATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCGATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCT                                                         >  SRR4302540.3742854/1‑94 (MQ=60)

                                     ATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCT                                                         >  SRR4302540.1228932/1‑94 (MQ=60)

                                     ATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCT                                                         <  SRR4302540.8477456/94‑1 (MQ=60)

                                     ATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCT                                                         >  SRR4302540.2403293/1‑94 (MQ=60)

                                     ATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCT                                                         >  SRR4302540.8172044/1‑94 (MQ=60)

                                     ATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCT                                                         >  SRR4302540.5043651/1‑94 (MQ=60)

                                      TCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTA                                                        >  SRR4302540.8346983/1‑94 (MQ=60)

                                       CCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTAT                                                       >  SRR4302540.9705799/1‑94 (MQ=60)

                                         GCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTT                                                     >  SRR4302540.7898663/1‑94 (MQ=60)

                                         GCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGAACAGCAACATGGCGCTTGTACATCTATTT                                                     >  SRR4302540.4677350/1‑94 (MQ=60)

                                          CATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTC                                                    >  SRR4302540.3091553/1‑94 (MQ=60)

                                           ATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACCGCAAAATGGCGCTTGTACATCTATTTCC                                                   >  SRR4302540.1458736/1‑94 (MQ=60)

                                           ATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCC                                                   <  SRR4302540.10146020/94‑1 (MQ=60)

                                           ATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCC                                                   <  SRR4302540.5086679/94‑1 (MQ=60)

                                           ATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCC                                                   >  SRR4302540.1458737/1‑94 (MQ=60)

                                            TAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCC                                                  >  SRR4302540.6485113/1‑94 (MQ=60)

                                            TAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCC                                                  <  SRR4302540.8854262/94‑1 (MQ=60)

                                              ATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCC                                                <  SRR4302540.7814735/94‑1 (MQ=60)

                                              ATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCC                                                <  SRR4302540.744006/94‑1 (MQ=60)

                                               TTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCA                                               <  SRR4302540.6246806/94‑1 (MQ=60)

                                               TTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCA                                               >  SRR4302540.3482299/1‑94 (MQ=60)

                                               TTTCCAGCAATCTTTGTGTATTTGCAATTATGTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCA                                               <  SRR4302540.6246807/94‑1 (MQ=60)

                                                 TCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAAT                                             <  SRR4302540.3758805/94‑1 (MQ=60)

                                                 TCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAAT                                             >  SRR4302540.118657/1‑94 (MQ=60)

                                                 TCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAAT                                             <  SRR4302540.8033688/94‑1 (MQ=60)

                                                 TCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGCTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAAT                                             >  SRR4302540.7119034/1‑94 (MQ=60)

                                                 TCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGCTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAAT                                             >  SRR4302540.7119036/1‑94 (MQ=60)

                                                 TCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGCTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAAT                                             >  SRR4302540.7119039/1‑94 (MQ=60)

                                                 TCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TGTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAAT                                             <  SRR4302540.8033992/94‑1 (MQ=60)

                                                  CCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATG                                            >  SRR4302540.5617427/1‑94 (MQ=60)

                                                  CCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATG                                            >  SRR4302540.6104380/1‑94 (MQ=60)

                                                  CCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATG                                            <  SRR4302540.4128829/94‑1 (MQ=60)

                                                   CAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGC                                           <  SRR4302540.2790971/94‑1 (MQ=60)

                                                   CAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGC                                           >  SRR4302540.4744263/1‑94 (MQ=60)

                                                     GCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAACATGGCGCTTGTACATCTATTTCCCCCActgacg                                         >  SRR4302540.6039014/1‑88 (MQ=60)

                                                     GCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAG                                         >  SRR4302540.6039280/1‑94 (MQ=60)

                                                      CAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGG                                        >  SRR4302540.2217083/1‑94 (MQ=60)

                                                      CAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGCTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGG                                        >  SRR4302540.5182071/1‑94 (MQ=60)

                                                       AATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGA                                       >  SRR4302540.10095426/1‑94 (MQ=60)

                                                       AATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGA                                       >  SRR4302540.9615646/1‑94 (MQ=60)

                                                       AATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGA                                       >  SRR4302540.8043955/1‑94 (MQ=60)

                                                        ATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGAT                                      <  SRR4302540.7155564/94‑1 (MQ=60)

                                                        ATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGAT                                      >  SRR4302540.2484960/1‑94 (MQ=60)

                                                        ATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGAT                                      <  SRR4302540.10106708/94‑1 (MQ=60)

                                                        ATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGAT                                      <  SRR4302540.5527029/94‑1 (MQ=60)

                                                         atttttgTTATTTGCAATTATTGTTTTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATG                                     <  SRR4302540.8705911/87‑1 (MQ=60)

                                                         TCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATG                                     <  SRR4302540.206228/94‑1 (MQ=60)

                                                         TCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATG                                     >  SRR4302540.7735451/1‑94 (MQ=60)

                                                          CTTTGTGTATTTGCAATTATTTTTGTTGGGC‑TTGTGTAGGTTATTTGTACAGCAAAATGGCACTGGTACATCTATTTCCCCCAATGCAGGATGA                                    <  SRR4302540.1602362/94‑1 (MQ=60)

                                                           TTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGAT                                   <  SRR4302540.5333237/94‑1 (MQ=60)

                                                           TTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGAT                                   <  SRR4302540.5332934/94‑1 (MQ=60)

                                                            TTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATA                                  >  SRR4302540.9022249/1‑94 (MQ=60)

                                                             TGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAA                                 <  SRR4302540.3013194/94‑1 (MQ=60)

                                                             TGTGTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAA                                 <  SRR4302540.8842689/94‑1 (MQ=60)

                                                              GTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAA                                >  SRR4302540.8654989/1‑94 (MQ=60)

                                                              GTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAA                                <  SRR4302540.730572/94‑1 (MQ=60)

                                                              GTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAA                                <  SRR4302540.354717/94‑1 (MQ=60)

                                                                TTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATA                              >  SRR4302540.5448836/1‑94 (MQ=60)

                                                                TTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATA                              <  SRR4302540.1303194/94‑1 (MQ=60)

                                                                TTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATA                              <  SRR4302540.6415011/94‑1 (MQ=60)

                                                                TTATTTGCAATTATTTTTGTTAGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATA                              <  SRR4302540.2732459/94‑1 (MQ=60)

                                                                 TATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATAT                             >  SRR4302540.5332805/1‑94 (MQ=60)

                                                                 TATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATAT                             >  SRR4302540.6764939/1‑94 (MQ=60)

                                                                 TATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATAT                             <  SRR4302540.102221/94‑1 (MQ=60)

                                                                 TATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATAT                             <  SRR4302540.5908131/94‑1 (MQ=60)

                                                                  ATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATC                            >  SRR4302540.2275131/1‑94 (MQ=60)

                                                                  ATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATC                            >  SRR4302540.5709263/1‑94 (MQ=60)

                                                                  ATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATC                            >  SRR4302540.8106153/1‑94 (MQ=60)

                                                                  ATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATA                            >  SRR4302540.3314744/1‑94 (MQ=60)

                                                                   TTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCA                           <  SRR4302540.4636/94‑1 (MQ=60)

                                                                    TTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCAC                          >  SRR4302540.4493502/1‑94 (MQ=60)

                                                                    TTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCAC                          >  SRR4302540.7485819/1‑94 (MQ=60)

                                                                    TTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCAC                          >  SRR4302540.9626597/1‑94 (MQ=60)

                                                                    TTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCAC                          <  SRR4302540.10067495/94‑1 (MQ=60)

                                                                     TGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACG                         >  SRR4302540.3781840/1‑94 (MQ=60)

                                                                      GCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGG                        <  SRR4302540.6512978/94‑1 (MQ=60)

                                                                      GCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGG                        >  SRR4302540.4304794/1‑94 (MQ=60)

                                                                      GCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGG                        <  SRR4302540.6307604/94‑1 (MQ=60)

                                                                       CAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCAATTTCCCCCAATGCAGGATGATAAATATCACGGG                       <  SRR4302540.3264476/94‑1 (MQ=60)

                                                                        AATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGA                      <  SRR4302540.4621570/94‑1 (MQ=60)

                                                                         ATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAG                     <  SRR4302540.4777401/94‑1 (MQ=60)

                                                                         ATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAG                     <  SRR4302540.6824983/94‑1 (MQ=60)

                                                                           TATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAA                   <  SRR4302540.4401415/94‑1 (MQ=60)

                                                                           TATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAA                   <  SRR4302540.7619891/94‑1 (MQ=60)

                                                                           TATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAA                   <  SRR4302540.5060791/94‑1 (MQ=60)

                                                                           TATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAA                   <  SRR4302540.1771368/94‑1 (MQ=60)

                                                                            ATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCTCCCAATGCAGGATGATAAATATCACGGGAGAAT                  >  SRR4302540.9785794/1‑94 (MQ=60)

                                                                             TTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATA                 >  SRR4302540.1405257/1‑94 (MQ=60)

                                                                             TTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATA                 >  SRR4302540.5191367/1‑94 (MQ=60)

                                                                              TTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAG                >  SRR4302540.1084965/1‑94 (MQ=60)

                                                                              TTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCGATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAG                <  SRR4302540.7937514/94‑1 (MQ=60)

                                                                               TTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGA               <  SRR4302540.716095/94‑1 (MQ=60)

                                                                                 TGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGA             <  SRR4302540.6065345/94‑1 (MQ=60)

                                                                                  GTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAA            >  SRR4302540.9842573/1‑94 (MQ=60)

                                                                                  GTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAA            >  SRR4302540.8449415/1‑94 (MQ=60)

                                                                                  GTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAA            >  SRR4302540.7185194/1‑94 (MQ=60)

                                                                                   TTNGNGNTNTTGTAGGTTATTNGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAA            <  SRR4302540.434517/94‑1 (MQ=60)

                                                                                   TTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAAT           <  SRR4302540.3064815/94‑1 (MQ=60)

                                                                                   TTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAAT           >  SRR4302540.983054/1‑94 (MQ=60)

                                                                                    TGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATC          <  SRR4302540.7010291/94‑1 (MQ=60)

                                                                                    TGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATC          >  SRR4302540.1220901/1‑94 (MQ=60)

                                                                                     GGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGACGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCA         <  SRR4302540.8988376/94‑1 (MQ=60)

                                                                                      GGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCAT        <  SRR4302540.8727296/94‑1 (MQ=60)

                                                                                      GGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCAT        >  SRR4302540.10037285/1‑94 (MQ=60)

                                                                                      GGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCAT        <  SRR4302540.5585936/94‑1 (MQ=60)

                                                                                        gcTTTTGTAGGTTATGTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATC       <  SRR4302540.8588244/92‑1 (MQ=60)

                                                                                         CTTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCA      >  SRR4302540.1827993/1‑94 (MQ=60)

                                                                                          TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAGTAGAGAATCATCAA     >  SRR4302540.9769622/1‑94 (MQ=60)

                                                                                          TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAA     <  SRR4302540.1100213/94‑1 (MQ=60)

                                                                                          TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAA     <  SRR4302540.1661675/94‑1 (MQ=60)

                                                                                           TTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAAT    <  SRR4302540.6616241/94‑1 (MQ=60)

                                                                                            TTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATC   >  SRR4302540.6354573/1‑94 (MQ=60)

                                                                                            TTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATC   >  SRR4302540.6354572/1‑94 (MQ=60)

                                                                                            TTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATC   <  SRR4302540.1242860/94‑1 (MQ=60)

ACTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCTTTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAATCATCAATCA  >  NC_000913/2311242‑2311428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`