Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,417,813 T→C intergenic (‑8/+48) b2300 ← / ← yfcF hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,417,8130TC100.0% 862.9 / NA 267intergenic (‑8/+48)b2300/yfcFhypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (130/137);  total (130/137)

Only 100 of 303 total aligned reads displayed.

GCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACTCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGA  >  NC_000913/2417723‑2417901
                                                                                          |                                                                                        
  aCCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCAcccctc                                                                                      >  1:7905824/1‑93 (MQ=255)
  aCCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCAcccctc                                                                                      <  2:1230838/93‑1 (MQ=255)
   ccGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcg                                                                                     <  2:2323828/93‑1 (MQ=255)
    cGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcgt                                                                                    <  1:7751892/93‑1 (MQ=255)
     gCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcgtc                                                                                   >  1:5863494/1‑93 (MQ=255)
          gggCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGaaaa                                                                              >  1:9913466/1‑93 (MQ=255)
            gCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGaaaaaa                                                                            >  2:4012948/1‑93 (MQ=255)
             cAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAAc                                                                           <  1:5281770/93‑1 (MQ=255)
             cAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAAc                                                                           <  1:1895535/93‑1 (MQ=255)
             cAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAAc                                                                           >  1:1749108/1‑93 (MQ=255)
              aaaCAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACg                                                                          >  2:3585380/1‑93 (MQ=255)
              aaaCAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACg                                                                          >  1:3160785/1‑93 (MQ=255)
               aacaacTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACga                                                                         >  2:2897754/1‑92 (MQ=255)
               aacaacTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGt                                                                         <  1:401932/93‑1 (MQ=255)
                acaacTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTa                                                                        <  1:3275426/93‑1 (MQ=255)
                  aacTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAg                                                                      <  2:8139155/93‑1 (MQ=255)
                   acTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGGAAGc                                                                     >  1:2006793/1‑93 (MQ=255)
                     tCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTa                                                                   >  2:4337954/1‑93 (MQ=255)
                     tCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTa                                                                   <  2:5016404/93‑1 (MQ=255)
                     tCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTa                                                                   >  2:6209504/1‑93 (MQ=255)
                      ccAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTAt                                                                  >  1:7813875/1‑93 (MQ=255)
                       cAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATg                                                                 <  1:8482993/93‑1 (MQ=255)
                       cAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATg                                                                 >  2:8256077/1‑93 (MQ=255)
                        aGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGa                                                                <  1:7137660/93‑1 (MQ=255)
                        aGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGa                                                                >  1:10012702/1‑93 (MQ=255)
                         gAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGAt                                                               >  2:778038/1‑93 (MQ=255)
                          aaCACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATa                                                              >  2:9309485/1‑93 (MQ=255)
                          aaCACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATa                                                              <  1:6354073/93‑1 (MQ=255)
                          aaCACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATa                                                              >  2:477153/1‑93 (MQ=255)
                           acacGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATAc                                                             >  2:9664801/1‑93 (MQ=255)
                           acacGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATAc                                                             >  2:8465932/1‑93 (MQ=255)
                             acGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTg                                                           >  2:8767390/1‑93 (MQ=255)
                             acGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTg                                                           >  1:2589436/1‑93 (MQ=255)
                              cGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTgg                                                          <  1:2472429/93‑1 (MQ=255)
                               gTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGa                                                         >  2:7566711/1‑93 (MQ=255)
                                  ccGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTc                                                      <  2:4967647/93‑1 (MQ=255)
                                  ccGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTc                                                      <  2:7943386/93‑1 (MQ=255)
                                    gTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTg                                                    >  1:5393786/1‑93 (MQ=255)
                                    gTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTg                                                    <  2:6533278/93‑1 (MQ=255)
                                     tCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGt                                                   <  1:6277119/93‑1 (MQ=255)
                                      cGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTc                                                  <  1:8407672/93‑1 (MQ=255)
                                       gCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCg                                                 <  2:5677428/93‑1 (MQ=255)
                                        ccGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGt                                                >  2:7419817/1‑93 (MQ=255)
                                         cGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGtt                                               <  2:384600/93‑1 (MQ=255)
                                         cGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGtt                                               >  2:3101676/1‑93 (MQ=255)
                                          ggTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTg                                              >  1:2811410/1‑93 (MQ=255)
                                          ggTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTAACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTg                                              >  1:7400557/1‑93 (MQ=255)
                                           gTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGc                                             >  1:2185916/1‑93 (MQ=255)
                                           gTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGc                                             >  1:1699813/1‑93 (MQ=255)
                                             aaCGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTa                                           <  2:2284252/93‑1 (MQ=255)
                                             aaCGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTa                                           <  2:6063569/93‑1 (MQ=255)
                                               cGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATc                                         <  2:8843848/93‑1 (MQ=255)
                                                gACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCa                                        >  1:240359/1‑93 (MQ=255)
                                                caCCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCa                                        <  2:2825652/92‑1 (MQ=255)
                                                   ccATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGcc                                     <  1:9783012/93‑1 (MQ=255)
                                                   ccATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGcc                                     >  1:453026/1‑93 (MQ=255)
                                                   ccATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGcc                                     >  2:9591846/1‑93 (MQ=255)
                                                    cATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCa                                    <  2:1676728/93‑1 (MQ=255)
                                                    cATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCa                                    >  1:4945419/1‑93 (MQ=255)
                                                     aTGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAg                                   <  1:5513742/93‑1 (MQ=255)
                                                     aTGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAg                                   <  1:1633369/93‑1 (MQ=255)
                                                      tGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGa                                  >  2:7198149/1‑93 (MQ=255)
                                                      tGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGa                                  <  1:4217117/93‑1 (MQ=255)
                                                       gAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAt                                 <  1:8888164/93‑1 (MQ=255)
                                                       gAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAt                                 <  1:7560052/93‑1 (MQ=255)
                                                       gAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAt                                 <  2:6642860/93‑1 (MQ=255)
                                                        aaTGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAtt                                >  1:8619814/1‑93 (MQ=255)
                                                           gTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCt                             >  2:6384665/1‑93 (MQ=255)
                                                            tCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCtt                            <  2:8569151/93‑1 (MQ=255)
                                                            tCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCtt                            <  1:6528551/93‑1 (MQ=255)
                                                             ccGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTc                           <  1:9350543/93‑1 (MQ=255)
                                                                aTGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGcc                        <  1:9680815/93‑1 (MQ=255)
                                                                aTGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGcc                        <  2:8388438/93‑1 (MQ=255)
                                                                 tGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCg                       >  2:3592802/1‑93 (MQ=255)
                                                                   cAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGaa                     <  1:2252785/93‑1 (MQ=255)
                                                                     aaCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAg                   <  2:9337477/93‑1 (MQ=255)
                                                                        aTCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGc                >  2:971354/1‑93 (MQ=255)
                                                                        aTCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGc                <  1:8333579/93‑1 (MQ=255)
                                                                         tCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCa               >  1:3721694/1‑93 (MQ=255)
                                                                         tCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCa               >  1:8252440/1‑93 (MQ=255)
                                                                          cAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCaa              <  2:1947359/93‑1 (MQ=255)
                                                                           aGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAAt             >  2:5149987/1‑93 (MQ=255)
                                                                             tttCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATaa           >  1:3949123/1‑93 (MQ=255)
                                                                              ttCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATaaa          <  1:8084724/93‑1 (MQ=255)
                                                                               tcatcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATaaaa         <  2:5831037/93‑1 (MQ=255)
                                                                               tcatcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATaaaa         <  1:6194511/93‑1 (MQ=255)
                                                                               tcatcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATaaaa         <  1:957870/93‑1 (MQ=255)
                                                                               tcatcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATaaaa         <  2:2040935/93‑1 (MQ=255)
                                                                               tcatcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATaaaa         <  2:26060/93‑1 (MQ=255)
                                                                                catcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAAc        >  2:6927395/1‑93 (MQ=255)
                                                                                catcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAAc        >  1:5944075/1‑93 (MQ=255)
                                                                                 atcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACg       >  2:7885505/1‑93 (MQ=255)
                                                                                 atcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACg       >  2:5313191/1‑93 (MQ=255)
                                                                                 atcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACg       >  1:5138604/1‑93 (MQ=255)
                                                                                  tcactcacCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGc      <  2:3349596/93‑1 (MQ=255)
                                                                                   cactcaccCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCt     <  1:1522629/93‑1 (MQ=255)
                                                                                   cactcaccCCTCGTCGAAAAAACATAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCt     <  2:5494938/93‑1 (MQ=255)
                                                                                    actcacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTg    >  1:3908642/1‑93 (MQ=255)
                                                                                     ctcacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTgg   <  1:6158768/93‑1 (MQ=255)
                                                                                     ctcacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTgg   <  1:2890353/93‑1 (MQ=255)
                                                                                          |                                                                                        
GCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACTCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGA  >  NC_000913/2417723‑2417901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TGGGCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACTCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGACAGA  >  NC_000913/2417720‑2417905
                                                                                             |                                                                                            
TGGGCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACC                                                                                              >  SRR4302540.8540867/1‑94 (MQ=60)
TGGGCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACC                                                                                              >  SRR4302540.1485582/1‑94 (MQ=60)
TGGGCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACC                                                                                              >  SRR4302540.5951487/1‑94 (MQ=60)
  GGCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCC                                                                                            >  SRR4302540.322227/1‑94 (MQ=60)
   GCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCT                                                                                           <  SRR4302540.396597/94‑1 (MQ=60)
    CACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTC                                                                                          >  SRR4302540.7998021/1‑94 (MQ=60)
     ACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCG                                                                                         <  SRR4302540.2786672/94‑1 (MQ=60)
       CGGTTTGGGCAAACAACTCCAAAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTC                                                                                       <  SRR4302540.7842431/94‑1 (MQ=60)
       CGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTC                                                                                       >  SRR4302540.4851561/1‑94 (MQ=60)
       CGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTC                                                                                       <  SRR4302540.7044606/94‑1 (MQ=60)
       CGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTC                                                                                       >  SRR4302540.4000820/1‑94 (MQ=60)
       CGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTC                                                                                       <  SRR4302540.2531742/94‑1 (MQ=60)
       CGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTC                                                                                       <  SRR4302540.7842424/94‑1 (MQ=60)
       CGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTC                                                                                       >  SRR4302540.5928324/1‑94 (MQ=60)
           TTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAA                                                                                   >  SRR4302540.8066303/1‑94 (MQ=60)
           TTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAA                                                                                   <  SRR4302540.2403114/94‑1 (MQ=60)
            TGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAA                                                                                  >  SRR4302540.10029249/1‑94 (MQ=60)
             GGGCAAACAACCCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAA                                                                                 <  SRR4302540.3113060/94‑1 (MQ=60)
              GGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAA                                                                                >  SRR4302540.1750764/1‑94 (MQ=60)
               gcaacacacttgAGAACATGTTCTGTCGCCGGTAACGACACATGAATGTCCGATGCAAACATCAGTTTCATCACTCTCCCCGAGTCGAAAAAAC                                                                               <  SRR4302540.8908989/82‑1 (MQ=60)
               GCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAAC                                                                               >  SRR4302540.1768051/1‑94 (MQ=60)
               GCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAAC                                                                               >  SRR4302540.1653588/1‑94 (MQ=60)
               GCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAAC                                                                               <  SRR4302540.3963166/94‑1 (MQ=60)
               GCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAAC                                                                               <  SRR4302540.8554670/94‑1 (MQ=60)
                CAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACG                                                                              <  SRR4302540.5339475/94‑1 (MQ=60)
                CAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACG                                                                              >  SRR4302540.3195176/1‑94 (MQ=60)
                CAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACG                                                                              >  SRR4302540.3997187/1‑94 (MQ=60)
                CAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACG                                                                              <  SRR4302540.1916277/94‑1 (MQ=60)
                 AAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGT                                                                             >  SRR4302540.4903512/1‑94 (MQ=60)
                 AAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGA                                                                             >  SRR4302540.2229782/1‑94 (MQ=60)
                 AAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGA                                                                             >  SRR4302540.2890381/1‑94 (MQ=60)
                  AACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTA                                                                            >  SRR4302540.2403685/1‑94 (MQ=60)
                  AACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTA                                                                            <  SRR4302540.406123/94‑1 (MQ=60)
                   ACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAA                                                                           <  SRR4302540.3311193/94‑1 (MQ=60)
                   ACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAA                                                                           <  SRR4302540.316732/94‑1 (MQ=60)
                    CAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAG                                                                          <  SRR4302540.1425387/94‑1 (MQ=60)
                     AACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGC                                                                         <  SRR4302540.8590888/94‑1 (MQ=60)
                     AACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGC                                                                         >  SRR4302540.9886602/1‑94 (MQ=60)
                     AACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGGAAGC                                                                         >  SRR4302540.2028506/1‑94 (MQ=60)
                     AACTCCAGAACACGTGCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGC                                                                         <  SRR4302540.6111610/94‑1 (MQ=60)
                      ACTCCAGAGCACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCT                                                                        <  SRR4302540.7496002/94‑1 (MQ=60)
                       CTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTA                                                                       >  SRR4302540.5213022/1‑94 (MQ=60)
                        TCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAAGGTAAGCTAT                                                                      <  SRR4302540.2437245/94‑1 (MQ=60)
                        TCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTAT                                                                      >  SRR4302540.7905189/1‑94 (MQ=60)
                        TCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTAT                                                                      <  SRR4302540.2013907/94‑1 (MQ=60)
                        TCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTAT                                                                      >  SRR4302540.7432929/1‑94 (MQ=60)
                        TCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTAT                                                                      >  SRR4302540.7905188/1‑94 (MQ=60)
                          CAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGA                                                                    >  SRR4302540.10129282/1‑94 (MQ=60)
                          CAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGA                                                                    <  SRR4302540.9189930/94‑1 (MQ=60)
                          CAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGA                                                                    <  SRR4302540.8581535/94‑1 (MQ=60)
                           AGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGAT                                                                   <  SRR4302540.9573760/94‑1 (MQ=60)
                           AGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGAT                                                                   >  SRR4302540.5351134/1‑94 (MQ=60)
                           AGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGAT                                                                   <  SRR4302540.7217180/94‑1 (MQ=60)
                           AGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGAT                                                                   <  SRR4302540.7680537/94‑1 (MQ=60)
                             AACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATAC                                                                 >  SRR4302540.8461439/1‑94 (MQ=60)
                             AACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATAC                                                                 <  SRR4302540.6424835/94‑1 (MQ=60)
                              ACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACT                                                                <  SRR4302540.5091621/94‑1 (MQ=60)
                              ACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACT                                                                <  SRR4302540.1583194/94‑1 (MQ=60)
                               CACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTG                                                               >  SRR4302540.2617351/1‑94 (MQ=60)
                                ACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCTCTCTCCCCTCGTCGAAAAAACGTAAGCTATGATACTGG                                                              <  SRR4302540.7960464/94‑1 (MQ=60)
                                 CGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGACAAAACGTAAGCTATGATACTGGA                                                             >  SRR4302540.274865/1‑94 (MQ=60)
                                 CGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGA                                                             <  SRR4302540.2499045/94‑1 (MQ=60)
                                   TTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATT                                                           <  SRR4302540.1920055/94‑1 (MQ=60)
                                   TTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATT                                                           <  SRR4302540.1887552/94‑1 (MQ=60)
                                     CCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAACCGTAAGCTATGATACTGGATTCT                                                         <  SRR4302540.1845011/94‑1 (MQ=60)
                                     CCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCT                                                         <  SRR4302540.971996/94‑1 (MQ=60)
                                     CCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCT                                                         <  SRR4302540.5979197/94‑1 (MQ=60)
                                      CGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAACCGTAAGCTATTATACTGGATTCTG                                                        >  SRR4302540.5453090/1‑94 (MQ=60)
                                      CGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTG                                                        >  SRR4302540.5453092/1‑94 (MQ=60)
                                       GTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGT                                                       >  SRR4302540.6230039/1‑94 (MQ=60)
                                       GTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGT                                                       >  SRR4302540.6554196/1‑94 (MQ=60)
                                        TCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCCCCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTC                                                      <  SRR4302540.6346950/94‑1 (MQ=60)
                                        TCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTC                                                      <  SRR4302540.6346951/94‑1 (MQ=60)
                                        TCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTC                                                      <  SRR4302540.2204500/94‑1 (MQ=60)
                                         CGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCG                                                     >  SRR4302540.8607141/1‑94 (MQ=60)
                                         CGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCG                                                     <  SRR4302540.8505259/94‑1 (MQ=60)
                                           CCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTT                                                   <  SRR4302540.588713/94‑1 (MQ=60)
                                            ccggaaaggCCCATGAATGTCCCATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTG                                                  <  SRR4302540.3179438/85‑1 (MQ=60)
                                            CGGTAACGACCCATGAATGTCCGATGCAAACCTCAGTTTCCTCACCCACCCCTCTTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTG                                                  <  SRR4302540.3179434/94‑1 (MQ=60)
                                            CGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTG                                                  >  SRR4302540.9941385/1‑94 (MQ=60)
                                            CGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTG                                                  >  SRR4302540.2841769/1‑94 (MQ=60)
                                            CGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTG                                                  <  SRR4302540.3445521/94‑1 (MQ=60)
                                            CGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTAACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTG                                                  >  SRR4302540.7483003/1‑94 (MQ=60)
                                             GGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGC                                                 >  SRR4302540.5569501/1‑94 (MQ=60)
                                             GGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGC                                                 >  SRR4302540.101772/1‑94 (MQ=60)
                                             GGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGC                                                 >  SRR4302540.2209515/1‑94 (MQ=60)
                                             GGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGC                                                 >  SRR4302540.1718221/1‑94 (MQ=60)
                                                 ACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATC                                             <  SRR4302540.2433160/94‑1 (MQ=60)
                                                 ACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATC                                             >  SRR4302540.176255/1‑94 (MQ=60)
                                                  CGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCA                                            >  SRR4302540.242686/1‑94 (MQ=60)
                                                   GACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAG                                           <  SRR4302540.7963404/94‑1 (MQ=60)
                                                   GACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAG                                           <  SRR4302540.8405166/94‑1 (MQ=60)
                                                    ACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGC                                          >  SRR4302540.6411514/1‑94 (MQ=60)
                                                    ACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGC                                          >  SRR4302540.6411513/1‑94 (MQ=60)
                                                     CCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCC                                         >  SRR4302540.9926819/1‑94 (MQ=60)
                                                     CCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCC                                         >  SRR4302540.457861/1‑94 (MQ=60)
                                                      CCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCA                                        <  SRR4302540.6146576/94‑1 (MQ=60)
                                                      CCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCA                                        <  SRR4302540.9897657/94‑1 (MQ=60)
                                                      CCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCA                                        >  SRR4302540.4998807/1‑94 (MQ=60)
                                                       CATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAG                                       <  SRR4302540.2853878/94‑1 (MQ=60)
                                                       CATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAG                                       <  SRR4302540.9598728/94‑1 (MQ=60)
                                                        ATGAATGTCCGATGCAAACATCAGTTTCATGACTCACCCCTGGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTTGTTGCTgtgagacatt                                      >  SRR4302540.8338570/1‑84 (MQ=60)
                                                        ATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGT                                      >  SRR4302540.8529108/1‑94 (MQ=60)
                                                        ATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGT                                      >  SRR4302540.8437021/1‑94 (MQ=60)
                                                        ATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGA                                      <  SRR4302540.1651240/94‑1 (MQ=60)
                                                        ATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGA                                      >  SRR4302540.8338571/1‑94 (MQ=60)
                                                        ATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGA                                      <  SRR4302540.1651239/94‑1 (MQ=60)
                                                        ATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGA                                      <  SRR4302540.5574470/94‑1 (MQ=60)
                                                         TGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAT                                     <  SRR4302540.4263026/94‑1 (MQ=60)
                                                         TGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAT                                     <  SRR4302540.8890981/94‑1 (MQ=60)
                                                         TGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAT                                     <  SRR4302540.6781445/94‑1 (MQ=60)
                                                          GAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATT                                    <  SRR4302540.7644838/94‑1 (MQ=60)
                                                          GAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATT                                    >  SRR4302540.8719944/1‑94 (MQ=60)
                                                          GAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATT                                    >  SRR4302540.8177528/1‑94 (MQ=60)
                                                          GAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATT                                    <  SRR4302540.8991057/94‑1 (MQ=60)
                                                          GAATGTCCGATGCAAACATCAGTTTCAGCCCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATT                                    <  SRR4302540.8991324/94‑1 (MQ=60)
                                                               TCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTC                               <  SRR4302540.5321137/94‑1 (MQ=60)
                                                               TCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTC                               <  SRR4302540.6601046/94‑1 (MQ=60)
                                                               TCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTC                               <  SRR4302540.623094/94‑1 (MQ=60)
                                                               TCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTC                               <  SRR4302540.9734917/94‑1 (MQ=60)
                                                                CCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCG                              <  SRR4302540.9461911/94‑1 (MQ=60)
                                                                CCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCG                              <  SRR4302540.5992021/94‑1 (MQ=60)
                                                                 CGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGC                             >  SRR4302540.225001/1‑94 (MQ=60)
                                                                  GATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCC                            <  SRR4302540.8775114/94‑1 (MQ=60)
                                                                  GATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCC                            >  SRR4302540.4160128/1‑94 (MQ=60)
                                                                   ATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTACGCTATGCTACTGGAatctctggatgctattactcagatcagttcgctc                           >  SRR4302540.547004/1‑60 (MQ=60)
                                                                   ATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCG                           <  SRR4302540.9794721/94‑1 (MQ=60)
                                                                   ATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCG                           >  SRR4302540.547002/1‑94 (MQ=60)
                                                                     GCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAA                         <  SRR4302540.9879613/94‑1 (MQ=60)
                                                                      CAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAA                        <  SRR4302540.4218788/94‑1 (MQ=60)
                                                                      CAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAA                        >  SRR4302540.5013694/1‑94 (MQ=60)
                                                                      CAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAA                        <  SRR4302540.2276963/94‑1 (MQ=60)
                                                                       AAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAG                       <  SRR4302540.4302761/94‑1 (MQ=60)
                                                                       AAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAG                       <  SRR4302540.75015/94‑1 (MQ=60)
                                                                        AACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGT                      >  SRR4302540.7460594/1‑94 (MQ=60)
                                                                          CATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGC                    >  SRR4302540.7888391/1‑94 (MQ=60)
                                                                           ATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCA                   >  SRR4302540.8217408/1‑94 (MQ=60)
                                                                           ATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCA                   >  SRR4302540.8348362/1‑94 (MQ=60)
                                                                           ATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCA                   >  SRR4302540.8348363/1‑94 (MQ=60)
                                                                           ATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCA                   <  SRR4302540.8430315/94‑1 (MQ=60)
                                                                           ATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCA                   >  SRR4302540.3762298/1‑94 (MQ=60)
                                                                           ATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCA                   <  SRR4302540.3859653/94‑1 (MQ=60)
                                                                               GTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAA               >  SRR4302540.3991762/1‑94 (MQ=60)
                                                                                TTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAA              <  SRR4302540.1610567/94‑1 (MQ=60)
                                                                                 TTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAA             <  SRR4302540.8178557/94‑1 (MQ=60)
                                                                                  TCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAAC            <  SRR4302540.967795/94‑1 (MQ=60)
                                                                                  TCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAAC            <  SRR4302540.6263478/94‑1 (MQ=60)
                                                                                  TCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAAC            >  SRR4302540.6009784/1‑94 (MQ=60)
                                                                                   CATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACG           <  SRR4302540.772694/94‑1 (MQ=60)
                                                                                   CATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACG           >  SRR4302540.5194267/1‑94 (MQ=60)
                                                                                    ATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGC          >  SRR4302540.6275007/1‑94 (MQ=60)
                                                                                    ATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGATTCGCCGAAAGTGCAATAAAACGC          >  SRR4302540.3264158/1‑94 (MQ=60)
                                                                                      CACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTG        >  SRR4302540.4429747/1‑94 (MQ=60)
                                                                                      CACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTG        >  SRR4302540.3912105/1‑94 (MQ=60)
                                                                                      CACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTG        <  SRR4302540.1539481/94‑1 (MQ=60)
                                                                                      CACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTG        >  SRR4302540.3951008/1‑94 (MQ=60)
                                                                                       CCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGG       <  SRR4302540.208425/94‑1 (MQ=60)
                                                                                       ACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGG       <  SRR4302540.6706628/94‑1 (MQ=60)
                                                                                        CTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGA      >  SRR4302540.584907/1‑94 (MQ=60)
                                                                                        CTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGA      <  SRR4302540.2921845/94‑1 (MQ=60)
                                                                                        CTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGA      <  SRR4302540.6227389/94‑1 (MQ=60)
                                                                                        CTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGA      <  SRR4302540.2513991/94‑1 (MQ=60)
                                                                                         TCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGAC     <  SRR4302540.65200/94‑1 (MQ=60)
                                                                                         TCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGAC     <  SRR4302540.3699206/94‑1 (MQ=60)
                                                                                           ACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTAGTTGCTATCAGCCAGATTGCTTCGCCGCAAGTGCAATAAAACGCTGGACAG   >  SRR4302540.6295395/1‑94 (MQ=60)
                                                                                            CCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGACAGA  <  SRR4302540.4044444/94‑1 (MQ=60)
                                                                                            CCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGACAGA  >  SRR4302540.6801364/1‑94 (MQ=60)
                                                                                             |                                                                                            
TGGGCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACTCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGACAGA  >  NC_000913/2417720‑2417905

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑