Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,448,289	C→T	A108T (GCA→ACA)	b2333 ←	putative fimbrial‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,448,289	0	C	T	100.0%	1060.2 / NA	294	A108T (GCA→ACA)	b2333	putative fimbrial‑like protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (153/141); total (153/141)

Only 100 of 306 total aligned reads displayed.

CCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGCCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAA  >  NC_000913/2448199‑2448378

ccccATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCa                                                                                         <  1:7178563/93‑1 (MQ=255)

ccccATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCa                                                                                         >  2:2525034/1‑93 (MQ=255)

 cccATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAg                                                                                        <  2:2805201/93‑1 (MQ=255)

   cATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGaa                                                                                      >  1:3681073/1‑93 (MQ=255)

     tttGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGaaaa                                                                                    >  1:3389142/1‑93 (MQ=255)

      ttGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAAc                                                                                   <  1:1734482/93‑1 (MQ=255)

      ttGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAAc                                                                                   >  2:1138531/1‑93 (MQ=255)

       tGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAAcc                                                                                  >  2:5462121/1‑93 (MQ=255)

        gTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCg                                                                                 >  2:7326796/1‑93 (MQ=255)

          aTTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCggg                                                                               <  1:3141144/93‑1 (MQ=255)

              ttgATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGgttgt                                                                           >  2:3366844/1‑93 (MQ=255)

               tgATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGgttgtt                                                                          >  2:4377567/1‑93 (MQ=255)

               tgATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGgttgtt                                                                          <  1:733243/93‑1 (MQ=255)

                gATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTc                                                                         >  2:4076209/1‑93 (MQ=255)

                gATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTc                                                                         <  2:8532963/93‑1 (MQ=255)

                 aTGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCg                                                                        >  2:363725/1‑93 (MQ=255)

                 aTGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCg                                                                        >  1:1213718/1‑93 (MQ=255)

                 aTGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCg                                                                        >  2:2289173/1‑93 (MQ=255)

                  tGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGc                                                                       >  1:283150/1‑93 (MQ=255)

                     cAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGt                                                                    <  2:1968553/93‑1 (MQ=255)

                     cAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGt                                                                    >  1:9990131/1‑93 (MQ=255)

                     cAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGt                                                                    <  2:6457572/93‑1 (MQ=255)

                      aaCCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtc                                                                   <  1:4540735/93‑1 (MQ=255)

                      aaCCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtc                                                                   <  2:428397/93‑1 (MQ=255)

                       aCCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtct                                                                  >  2:5594783/1‑93 (MQ=255)

                        ccTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtctt                                                                 <  2:3493310/93‑1 (MQ=255)

                        ccTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTACCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtctt                                                                 >  1:1538406/1‑93 (MQ=255)

                         cTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtcttc                                                                >  1:2191419/1‑93 (MQ=255)

                         cTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtcttc                                                                >  1:5958382/1‑93 (MQ=255)

                            cATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTAc                                                             <  1:2637896/93‑1 (MQ=255)

                             aTTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTAcc                                                            >  2:8434726/1‑93 (MQ=255)

                             aTTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTAcc                                                            <  1:5644969/93‑1 (MQ=255)

                                ccGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTAccccc                                                         <  2:9329317/93‑1 (MQ=255)

                                 cGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCg                                                        >  1:3894377/1‑93 (MQ=255)

                                 cGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCg                                                        >  1:128411/1‑93 (MQ=255)

                                  gTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTAcacccct                                                       >  2:3701470/1‑91 (MQ=255)

                                  gTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGt                                                       >  2:204980/1‑93 (MQ=255)

                                  gTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGt                                                       >  2:5123714/1‑93 (MQ=255)

                                   tCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTg                                                      <  1:5102921/93‑1 (MQ=255)

                                   tCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTg                                                      >  2:1892325/1‑93 (MQ=255)

                                    cGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGa                                                     <  2:8913646/93‑1 (MQ=255)

                                    cGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGa                                                     <  1:8801386/93‑1 (MQ=255)

                                    cGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGa                                                     >  1:722167/1‑93 (MQ=255)

                                     ggTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAg                                                    >  2:2741890/1‑93 (MQ=255)

                                       ttttttCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCg                                                  >  1:6883327/1‑93 (MQ=255)

                                        tttttCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGt                                                 <  1:3317226/93‑1 (MQ=255)

                                         ttttCCATGCCAATTCCTACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTg                                                >  2:1403748/1‑93 (MQ=255)

                                         ttttCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTg                                                >  1:5886629/1‑93 (MQ=255)

                                           ttCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGAc                                              <  2:2346083/93‑1 (MQ=255)

                                            tCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACt                                             >  2:6727558/1‑93 (MQ=255)

                                               aTGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACtttt                                          <  1:1614500/93‑1 (MQ=255)

                                                tGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTa                                         >  2:883093/1‑93 (MQ=255)

                                                tGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTa                                         <  1:9720933/93‑1 (MQ=255)

                                                tGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTa                                         <  1:9553273/93‑1 (MQ=255)

                                                tGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTa                                         <  2:3243885/93‑1 (MQ=255)

                                                 gCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTAc                                        >  2:7553004/1‑93 (MQ=255)

                                                  ccAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACg                                       <  2:5872035/93‑1 (MQ=255)

                                                  ccAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCCTCTACCCCCGTGAGCGTGACTTTTACg                                       <  1:7922939/93‑1 (MQ=255)

                                                    aaTTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGtt                                     >  2:8338474/1‑93 (MQ=255)

                                                    aaTTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGtt                                     <  1:7632825/93‑1 (MQ=255)

                                                    aaTTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGtt                                     >  2:5692361/1‑93 (MQ=255)

                                                     aTTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTg                                    >  1:5682568/1‑93 (MQ=255)

                                                      ttCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGt                                   >  2:4573821/1‑93 (MQ=255)

                                                      ttCCCACTCCCTGAGCGGTTGATCACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGt                                   <  2:5525540/93‑1 (MQ=255)

                                                        cccACACCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTAt                                 <  1:1694184/93‑1 (MQ=255)

                                                           ccTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATccc                              <  2:969867/92‑1 (MQ=255)

                                                           aCTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATccc                              <  1:4398819/93‑1 (MQ=255)

                                                           aCTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATccc                              <  2:8034220/93‑1 (MQ=255)

                                                            cTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCccg                             >  2:2163980/1‑93 (MQ=255)

                                                               ccTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCccgccg                          >  1:46815/1‑93 (MQ=255)

                                                                 tGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGc                        >  1:6161036/1‑93 (MQ=255)

                                                                 tGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGc                        <  2:9604002/93‑1 (MQ=255)

                                                                 tGAGCGGTTGACGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGc                        >  2:4923682/1‑93 (MQ=255)

                                                                  gAGCGGTTGATGACGTATCCCGTGTCAGAAAACCGGGTTGTTCGCTGGCTTCGCCACCCGGGAGCGGGCCTTTTACGTTGTATCGcgcccgcc                       >  1:7445670/1‑93 (MQ=255)

                                                                  gAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGcc                       >  1:6968704/1‑93 (MQ=255)

                                                                   aGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGccc                      <  1:10017684/93‑1 (MQ=255)

                                                                    gCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCt                     >  1:6103175/1‑93 (MQ=255)

                                                                      ggTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCttt                   <  1:4297611/93‑1 (MQ=255)

                                                                       gTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTg                  >  2:464931/1‑93 (MQ=255)

                                                                         tgatgaCGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCa                >  2:4532253/1‑93 (MQ=255)

                                                                         tgatgaCGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCa                <  1:2416871/93‑1 (MQ=255)

                                                                           atgaCGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAAt              <  2:5765808/93‑1 (MQ=255)

                                                                             gaCGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCt            >  1:6437911/1‑93 (MQ=255)

                                                                               cGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCttt          <  1:6337535/93‑1 (MQ=255)

                                                                               cGTAGCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCGGTGAGCGTGGCTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCttt          <  1:5386501/93‑1 (MQ=255)

                                                                                gTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTc         <  2:3142064/93‑1 (MQ=255)

                                                                                 tATCCAGTGTCAGAAAACCGTGGTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCa        >  2:7081620/1‑93 (MQ=255)

                                                                                 tATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCa        <  1:6584775/93‑1 (MQ=255)

                                                                                 tATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCa        >  1:832707/1‑93 (MQ=255)

                                                                                  ctCCAGTATCAGAAAATCGGGCTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAg       >  2:1720797/2‑93 (MQ=255)

                                                                                  aTCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAg       >  2:9170619/1‑93 (MQ=255)

                                                                                   tCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGc      >  2:6126078/1‑93 (MQ=255)

                                                                                   tCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGc      >  1:8150456/1‑93 (MQ=255)

                                                                                   tCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGc      >  1:9477348/1‑93 (MQ=255)

                                                                                    ccAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCt     >  2:8219002/1‑93 (MQ=255)

                                                                                    ccAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCt     <  1:5077808/93‑1 (MQ=255)

                                                                                    ccAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCt     <  1:2741226/93‑1 (MQ=255)

                                                                                     cAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCtt    >  1:206918/1‑93 (MQ=255)

                                                                                       gtgtCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTaa  >  2:2961260/1‑93 (MQ=255)

                                                                                       gtgtCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTaa  <  1:4031516/93‑1 (MQ=255)

CCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGCCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAA  >  NC_000913/2448199‑2448378

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGCCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGAC  >  NC_000913/2448196‑2448382

TCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGT                                                                                               <  SRR4302540.5168540/94‑1 (MQ=60)

 CGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTC                                                                                              >  SRR4302540.8950396/1‑94 (MQ=60)

  GCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCA                                                                                             <  SRR4302540.4005192/94‑1 (MQ=60)

  GCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCA                                                                                             >  SRR4302540.6009688/1‑94 (MQ=60)

  GCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCA                                                                                             >  SRR4302540.7595600/1‑94 (MQ=60)

   CCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAG                                                                                            >  SRR4302540.238024/1‑94 (MQ=60)

   CCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAG                                                                                            <  SRR4302540.7258587/94‑1 (MQ=60)

   CCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAG                                                                                            <  SRR4302540.2711145/94‑1 (MQ=60)

   CCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAG                                                                                            <  SRR4302540.111619/94‑1 (MQ=60)

    CCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGA                                                                                           >  SRR4302540.1978775/1‑94 (MQ=60)

    CCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGA                                                                                           >  SRR4302540.5444065/1‑94 (MQ=60)

     CCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAA                                                                                          <  SRR4302540.2976115/94‑1 (MQ=60)

     CCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAA                                                                                          >  SRR4302540.3721308/1‑94 (MQ=60)

       ATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAA                                                                                        >  SRR4302540.3426121/1‑94 (MQ=60)

       ATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAA                                                                                        >  SRR4302540.1451194/1‑94 (MQ=60)

       ATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGGCAGAAAA                                                                                        >  SRR4302540.3233567/1‑94 (MQ=60)

        TTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAAC                                                                                       <  SRR4302540.7144649/94‑1 (MQ=60)

         TTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACC                                                                                      <  SRR4302540.1753202/94‑1 (MQ=60)

         TTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACC                                                                                      >  SRR4302540.1910446/1‑94 (MQ=60)

          TGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCG                                                                                     <  SRR4302540.2551170/94‑1 (MQ=60)

          TGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCG                                                                                     <  SRR4302540.2551169/94‑1 (MQ=60)

            TATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGG                                                                                   <  SRR4302540.8394720/94‑1 (MQ=60)

             ATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGT                                                                                  <  SRR4302540.3175391/94‑1 (MQ=60)

               TGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTG                                                                                <  SRR4302540.9904725/94‑1 (MQ=60)

               TGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTG                                                                                >  SRR4302540.7286989/1‑94 (MQ=60)

                  TGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTC                                                                             <  SRR4302540.10086363/94‑1 (MQ=60)

                  TGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTC                                                                             <  SRR4302540.741083/94‑1 (MQ=60)

                   GATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCG                                                                            >  SRR4302540.1226158/1‑94 (MQ=60)

                    ATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGC                                                                           >  SRR4302540.285933/1‑94 (MQ=60)

                      GGCAACCTGCATTCCGTCGGTTTTTTCCATGCCGATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTG                                                                         <  SRR4302540.9786076/94‑1 (MQ=60)

                      GGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTG                                                                         <  SRR4302540.836906/94‑1 (MQ=60)

                      GGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTG                                                                         <  SRR4302540.7537428/94‑1 (MQ=60)

                       GCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGT                                                                        >  SRR4302540.10106570/1‑94 (MQ=60)

                        CAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTC                                                                       >  SRR4302540.2798354/1‑94 (MQ=60)

                         AACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCT                                                                      >  SRR4302540.5618521/1‑94 (MQ=60)

                         AACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCT                                                                      <  SRR4302540.4589878/94‑1 (MQ=60)

                          ACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTT                                                                     <  SRR4302540.4656409/94‑1 (MQ=60)

                          ACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTACCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTT                                                                     >  SRR4302540.1555419/1‑94 (MQ=60)

                           CCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTC                                                                    >  SRR4302540.9271350/1‑94 (MQ=60)

                           CCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTC                                                                    >  SRR4302540.2215085/1‑94 (MQ=60)

                           CCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTC                                                                    >  SRR4302540.6024282/1‑94 (MQ=60)

                           CCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTC                                                                    >  SRR4302540.6024281/1‑94 (MQ=60)

                            CTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCT                                                                   >  SRR4302540.7024965/1‑94 (MQ=60)

                             TGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA                                                                  >  SRR4302540.5158081/1‑94 (MQ=60)

                             TGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA                                                                  >  SRR4302540.2137208/1‑94 (MQ=60)

                             TGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTA                                                                  <  SRR4302540.3468272/94‑1 (MQ=60)

                             TGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGCTGTTCGCTGTCTTgtc                                                                  >  SRR4302540.3209979/1‑91 (MQ=60)

                             TGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGCGTCAGAAAACCGTGTTGTTCGCTGTCTTCTC                                                                  >  SRR4302540.5158083/1‑94 (MQ=60)

                               CATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACC                                                                >  SRR4302540.3686743/1‑94 (MQ=60)

                               CATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACC                                                                <  SRR4302540.2666467/94‑1 (MQ=60)

                                ATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCC                                                               <  SRR4302540.5707100/94‑1 (MQ=60)

                                  TCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCC                                                             <  SRR4302540.6569608/94‑1 (MQ=60)

                                   CCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCG                                                            >  SRR4302540.129764/1‑94 (MQ=60)

                                   CCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCG                                                            >  SRR4302540.129763/1‑94 (MQ=60)

                                   CCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCG                                                            >  SRR4302540.3936648/1‑94 (MQ=60)

                                    CGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGT                                                           >  SRR4302540.3768970/1‑94 (MQ=60)

                                     GTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTG                                                          >  SRR4302540.9641516/1‑94 (MQ=60)

                                     GTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTG                                                          >  SRR4302540.4555676/1‑94 (MQ=60)

                                      TCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGA                                                         <  SRR4302540.5158154/94‑1 (MQ=60)

                                      TCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGA                                                         <  SRR4302540.3756562/94‑1 (MQ=60)

                                      TCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGA                                                         >  SRR4302540.729908/1‑94 (MQ=60)

                                       CGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAG                                                        <  SRR4302540.8903140/94‑1 (MQ=60)

                                         GTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCG                                                      >  SRR4302540.2117753/1‑94 (MQ=60)

                                         GTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCG                                                      >  SRR4302540.6959632/1‑94 (MQ=60)

                                           TTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTG                                                    >  SRR4302540.6482819/1‑94 (MQ=60)

                                           TTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTG                                                    >  SRR4302540.5951661/1‑94 (MQ=60)

                                           TTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTG                                                    <  SRR4302540.3353600/94‑1 (MQ=60)

                                            TTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGA                                                   <  SRR4302540.7373866/94‑1 (MQ=60)

                                            TTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGA                                                   <  SRR4302540.5716874/94‑1 (MQ=60)

                                            TTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGA                                                   >  SRR4302540.5520275/1‑94 (MQ=60)

                                            TTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGA                                                   >  SRR4302540.1636818/1‑94 (MQ=60)

                                            TTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGA                                                   <  SRR4302540.9677510/94‑1 (MQ=60)

                                              TTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACT                                                 <  SRR4302540.1637215/94‑1 (MQ=60)

                                               TCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGAGTT                                                >  SRR4302540.5961652/1‑94 (MQ=60)

                                               TCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTT                                                <  SRR4302540.7027942/94‑1 (MQ=60)

                                               TCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTT                                                <  SRR4302540.158524/94‑1 (MQ=60)

                                                  ATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTA                                             <  SRR4302540.1632216/94‑1 (MQ=60)

                                                   TGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTAC                                            <  SRR4302540.9835132/94‑1 (MQ=60)

                                                   TGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTAC                                            <  SRR4302540.9666267/94‑1 (MQ=60)

                                                     CCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGT                                          <  SRR4302540.4728472/94‑1 (MQ=60)

                                                     CCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCCTCTACCCCCGTGAGCGTGACTTTTACGT                                          <  SRR4302540.8015292/94‑1 (MQ=60)

                                                     CCAATGCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGT                                          <  SRR4302540.4352970/94‑1 (MQ=60)

                                                       AATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTG                                        <  SRR4302540.7718690/94‑1 (MQ=60)

                                                       AATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTG                                        <  SRR4302540.3814422/94‑1 (MQ=60)

                                                       AATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTG                                        >  SRR4302540.5745133/1‑94 (MQ=60)

                                                        ATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGT                                       >  SRR4302540.7444439/1‑94 (MQ=60)

                                                        ATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGAGAGCGTGACTTTTACGTTGT                                       >  SRR4302540.4333480/1‑94 (MQ=60)

                                                         TTCCCTCTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTA                                      <  SRR4302540.1719039/94‑1 (MQ=60)

                                                         TTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTA                                      <  SRR4302540.173908/94‑1 (MQ=60)

                                                          TCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTTTACCCCCGTGAGCGGGACTTTTACGTTGTTT                                     >  SRR4302540.7323771/1‑94 (MQ=60)

                                                          TCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTAT                                     >  SRR4302540.7126504/1‑94 (MQ=60)

                                                          TCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTAT                                     <  SRR4302540.6812077/94‑1 (MQ=60)

                                                           CCCACACCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATC                                    <  SRR4302540.1712552/94‑1 (MQ=60)

                                                            CCGCTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCC                                   <  SRR4302540.336680/94‑1 (MQ=60)

                                                            CCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCC                                   <  SRR4302540.6112490/94‑1 (MQ=60)

                                                            CCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTAAGTTGTATTC                                   >  SRR4302540.5784577/1‑94 (MQ=60)

                                                             CACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCC                                  <  SRR4302540.6576216/94‑1 (MQ=60)

                                                             CACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCC                                  <  SRR4302540.6576215/94‑1 (MQ=60)

                                                             CACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCC                                  <  SRR4302540.1614998/94‑1 (MQ=60)

                                                              CCTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCG                                 <  SRR4302540.7272236/94‑1 (MQ=60)

                                                              ACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCG                                 <  SRR4302540.4446527/94‑1 (MQ=60)

                                                              ACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCG                                 >  SRR4302540.126983/1‑94 (MQ=60)

                                                               CTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGC                                >  SRR4302540.1357762/1‑94 (MQ=60)

                                                                TCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCC                               <  SRR4302540.7851415/94‑1 (MQ=60)

                                                                TCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCC                               >  SRR4302540.3005949/1‑94 (MQ=60)

                                                                 CCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCG                              >  SRR4302540.5873771/1‑94 (MQ=60)

                                                                 CCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCG                              >  SRR4302540.47292/1‑94 (MQ=60)

                                                                  CCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGG                             <  SRR4302540.4453018/94‑1 (MQ=60)

                                                                  CCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGC                             >  SRR4302540.8431872/1‑94 (MQ=60)

                                                                   CTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGC                            >  SRR4302540.6229684/1‑94 (MQ=60)

                                                                    TGAGCGGTTGATGACGTATCCCGTGTCAGAAAACCGGGTTGTTCGCTGGCTTCGCCACCCGGGAGCGGGCCTTTTACGTTGTATCGCGCCCGCC                           >  SRR4302540.7528631/1‑94 (MQ=34)

                                                                    TGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTCCGTTGCATCCCGCCGGCC                           >  SRR4302540.7528630/1‑94 (MQ=60)

                                                                    TGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCC                           >  SRR4302540.7046175/1‑94 (MQ=60)

                                                                     GAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCC                          >  SRR4302540.4028149/1‑94 (MQ=60)

                                                                     GAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCC                          <  SRR4302540.9621375/94‑1 (MQ=60)

                                                                      AGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCT                         <  SRR4302540.10134283/94‑1 (MQ=60)

                                                                      AGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCT                         >  SRR4302540.1097849/1‑94 (MQ=60)

                                                                      AGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCT                         >  SRR4302540.6171138/1‑94 (MQ=60)

                                                                       GCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTT                        >  SRR4302540.8063281/1‑94 (MQ=60)

                                                                        CGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTT                       >  SRR4302540.5114975/1‑94 (MQ=60)

                                                                        CGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTT                       <  SRR4302540.6677102/94‑1 (MQ=60)

                                                                        CGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTT                       >  SRR4302540.3377088/1‑94 (MQ=60)

                                                                        CGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGCCCCTTT                       >  SRR4302540.5263829/1‑94 (MQ=60)

                                                                         GGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTG                      <  SRR4302540.4344385/94‑1 (MQ=60)

                                                                         GGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTG                      <  SRR4302540.2686905/94‑1 (MQ=60)

                                                                         GGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTG                      <  SRR4302540.4344384/94‑1 (MQ=60)

                                                                          GTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCACGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGC                     <  SRR4302540.4266714/94‑1 (MQ=60)

                                                                            TGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAA                   >  SRR4302540.5721923/1‑94 (MQ=60)

                                                                            TGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAA                   <  SRR4302540.400775/94‑1 (MQ=60)

                                                                            TGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAA                   <  SRR4302540.2442915/94‑1 (MQ=60)

                                                                            TGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAA                   <  SRR4302540.2798914/94‑1 (MQ=60)

                                                                             GATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAAT                  >  SRR4302540.490536/1‑94 (MQ=60)

                                                                             GATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAAT                  <  SRR4302540.2311003/94‑1 (MQ=60)

                                                                              ATGCCGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATC                 <  SRR4302540.9075086/94‑1 (MQ=60)

                                                                              ATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATC                 <  SRR4302540.9187050/94‑1 (MQ=60)

                                                                              ATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATC                 >  SRR4302540.6377179/1‑94 (MQ=60)

                                                                              ATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATC                 <  SRR4302540.6390818/94‑1 (MQ=60)

                                                                              ATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATC                 <  SRR4302540.6420260/94‑1 (MQ=60)

                                                                               TGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCT                >  SRR4302540.6509563/1‑94 (MQ=60)

                                                                                  CGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTC             <  SRR4302540.6408108/94‑1 (MQ=60)

                                                                                  CGTAGCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCGGTGAGCGTGGCTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTC             <  SRR4302540.5445747/94‑1 (MQ=60)

                                                                                   GTGTCCAGTGTCAGAACACCTGGTTGCTCGCTTTCTTCTACCCCCGTGAGCGTGACTTTTACCTTGTATCCCGCCGGCCCTTTGCAATCTTTCA            <  SRR4302540.260446/94‑1 (MQ=60)

                                                                                   GTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCA            <  SRR4302540.7940128/94‑1 (MQ=60)

                                                                                   GTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCA            >  SRR4302540.8656734/1‑94 (MQ=60)

                                                                                   GTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCA            >  SRR4302540.841550/1‑94 (MQ=60)

                                                                                    TATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAG           <  SRR4302540.6657712/94‑1 (MQ=60)

                                                                                     ATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGC          >  SRR4302540.8245074/1‑94 (MQ=60)

                                                                                     ATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGC          >  SRR4302540.6184808/1‑94 (MQ=60)

                                                                                     ATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGC          >  SRR4302540.9589739/1‑94 (MQ=60)

                                                                                     ATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCACTTTGCAATGTTTCAGC          >  SRR4302540.8245072/1‑94 (MQ=60)

                                                                                       CCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTT        <  SRR4302540.5132708/94‑1 (MQ=60)

                                                                                       CCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTT        <  SRR4302540.2770825/94‑1 (MQ=60)

                                                                                       CCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTT        >  SRR4302540.208945/1‑94 (MQ=60)

                                                                                         AGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAA      >  SRR4302540.6211706/1‑94 (MQ=60)

                                                                                          GTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAA     >  SRR4302540.9813367/1‑94 (MQ=60)

                                                                                          GTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAA     <  SRR4302540.4074990/94‑1 (MQ=60)

                                                                                          GTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAA     >  SRR4302540.4083079/1‑94 (MQ=60)

                                                                                           TGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAG    <  SRR4302540.8973414/94‑1 (MQ=60)

                                                                                           TGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAG    <  SRR4302540.8269431/94‑1 (MQ=60)

                                                                                           TGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAG    <  SRR4302540.2670078/94‑1 (MQ=60)

                                                                                           TGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAA    >  SRR4302540.6587128/1‑94 (MQ=60)

                                                                                            GTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGA   <  SRR4302540.9265655/94‑1 (MQ=60)

                                                                                            GTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGA   >  SRR4302540.9527885/1‑94 (MQ=60)

                                                                                            GTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGA   >  SRR4302540.9151000/1‑94 (MQ=60)

                                                                                             TCAGAAAACCGGGTTGTTCGCTGTCTTCTCCCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGAC  <  SRR4302540.458353/94‑1 (MQ=60)

                                                                                             TCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGAC  <  SRR4302540.6273719/94‑1 (MQ=60)

                                                                                             TCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGAC  <  SRR4302540.3901582/94‑1 (MQ=60)

                                                                                             TCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGCTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGAC  <  SRR4302540.1118056/94‑1 (MQ=60)

                                                                                             TCAGAAAACCGGGTTGTTCCCTGACTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGAC  <  SRR4302540.2643500/94‑1 (MQ=60)

TCGCCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGCCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGAC  >  NC_000913/2448196‑2448382

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`