Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,693,606 A→G intergenic (‑43/‑353) purL ← / → yfhD phosphoribosylformyl‑glycineamide synthetase/putative periplasmic binding transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,693,6060AG99.6% 880.8 / ‑5.8 280intergenic (‑43/‑353)purL/yfhDphosphoribosylformyl‑glycineamide synthetase/putative periplasmic binding transport protein
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (154/124);  total (156/124)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 314 total aligned reads displayed.

GATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGC  >  NC_000913/2693516‑2693695
                                                                                           |                                                                                         
gATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGaac                                                                                         <  2:7578553/93‑2 (MQ=255)
 aTTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAAc                                                                                        <  1:8245302/93‑1 (MQ=255)
  ttCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACg                                                                                       >  2:921174/1‑93 (MQ=255)
     ggAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGc                                                                                    >  2:1167442/1‑93 (MQ=255)
      gAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCCAGGGGGGGGAACGGGCg                                                                                   >  2:711292/1‑93 (MQ=255)
      gAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACggggg                                                                                   >  2:2068361/1‑91 (MQ=255)
      gAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCg                                                                                   >  1:4811382/1‑93 (MQ=255)
      gAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGGGGACCCAAGGGGGGGGAAGGGGCg                                                                                   >  2:4894424/1‑93 (MQ=255)
       aaTGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGt                                                                                  >  2:33825/1‑93 (MQ=255)
         tGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCa                                                                                <  1:4228482/93‑1 (MQ=255)
         tGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCa                                                                                >  1:8941899/1‑93 (MQ=255)
              aCAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATtata                                                                           >  2:1751288/1‑93 (MQ=255)
              aCAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATtata                                                                           >  1:2292995/1‑93 (MQ=255)
               cAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATaa                                                                          >  1:9385418/1‑93 (MQ=255)
                aGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAAAGGGCGTCATTATaaa                                                                         >  1:2954639/1‑93 (MQ=255)
                 gTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGTACGGGCGTCATTATAAAg                                                                        >  1:1405783/1‑93 (MQ=255)
                  tGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGa                                                                       <  1:9325913/93‑1 (MQ=255)
                  tGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGa                                                                       >  1:8518113/1‑93 (MQ=255)
                   gCAGGCGAGCCACGCAGAATTTCCATCATACGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGaa                                                                      <  1:4030933/93‑1 (MQ=255)
                     aGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGGACGGGCGTCATTATAAAGAATc                                                                    >  1:2872174/1‑93 (MQ=255)
                     aGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATc                                                                    <  1:326784/93‑1 (MQ=255)
                     aGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATc                                                                    >  2:7970837/1‑93 (MQ=255)
                      ggCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCt                                                                   >  1:6578513/1‑93 (MQ=255)
                       gCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTg                                                                  >  1:3584714/1‑93 (MQ=255)
                        cGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGa                                                                 <  1:7397696/93‑1 (MQ=255)
                        cGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGa                                                                 <  2:3748003/93‑1 (MQ=255)
                         gAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGAt                                                                >  1:1994745/1‑93 (MQ=255)
                          aaCCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATg                                                               >  1:5828099/1‑93 (MQ=255)
                          aaCCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATg                                                               <  2:6402747/93‑1 (MQ=255)
                            ccACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATgcg                                                             >  1:5678773/1‑93 (MQ=255)
                              aCGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCt                                                           <  2:9373676/93‑1 (MQ=255)
                              aCGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCt                                                           >  1:6916640/1‑93 (MQ=255)
                              aCGCAGAATTTCCATCATAAGTCTCTCGGCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGCACGGGCGGCATTATAAAGAATCTTATgcgcg                                                           >  2:6453820/1‑92 (MQ=255)
                               cGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTg                                                          <  2:5116951/93‑1 (MQ=255)
                                gCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGa                                                         >  1:9261677/1‑93 (MQ=255)
                                gCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGa                                                         <  2:8207705/93‑1 (MQ=255)
                                gCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGa                                                         >  1:10015541/1‑93 (MQ=255)
                                gCAGAATTTCCACCAAAAGCCTCTGGCCTTCTAGGCTTTCGGTGTCCCCAGGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGa                                                         <  1:6412226/93‑1 (MQ=255)
                                     aTTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGaaa                                                    <  2:2216067/93‑1 (MQ=255)
                                      tttCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGGACGGGCGTCATTATAAAAAATCTGATGGGATGAAGAAAc                                                   >  1:9739615/1‑93 (MQ=255)
                                      tttCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAAc                                                   <  1:6836502/93‑1 (MQ=255)
                                      tttCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAAc                                                   <  2:2695145/93‑1 (MQ=255)
                                      tttCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAAc                                                   <  1:8436460/93‑1 (MQ=255)
                                      tttCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAAc                                                   <  1:3243198/93‑1 (MQ=255)
                                       ttCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAAcc                                                  >  2:181724/1‑93 (MQ=255)
                                       ttCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAAcc                                                  <  2:9837924/93‑1 (MQ=255)
                                        tCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCg                                                 >  1:6321662/1‑93 (MQ=255)
                                         ccATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCg                                                 >  2:10009089/1‑93 (MQ=255)
                                          catcatAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAACGCGtt                                               >  2:1136630/1‑93 (MQ=255)
                                          catcatAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGtt                                               <  1:274159/93‑1 (MQ=255)
                                            tcatAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTg                                             <  1:5407116/93‑1 (MQ=255)
                                            tcatAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTg                                             >  1:7825584/1‑93 (MQ=255)
                                            tcatAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTg                                             <  2:1278599/93‑1 (MQ=255)
                                              atAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCg                                           <  1:9102235/93‑1 (MQ=255)
                                               tAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGt                                          >  1:1734255/1‑93 (MQ=255)
                                               tAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGt                                          <  2:5246909/93‑1 (MQ=255)
                                               tAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGt                                          <  1:2547027/93‑1 (MQ=255)
                                                aaGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGCACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTg                                         >  2:722828/1‑93 (MQ=255)
                                                 aGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTgc                                        >  2:5550288/1‑92 (MQ=255)
                                                   tctctcGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGaa                                      <  1:5932347/93‑1 (MQ=255)
                                                   tctctcGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGaa                                      >  1:7573774/1‑93 (MQ=255)
                                                    ctctcGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGaaa                                     >  2:307740/1‑93 (MQ=255)
                                                     tctcGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAAt                                    >  1:7012753/1‑93 (MQ=255)
                                                       tcGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATaa                                  <  1:9416797/93‑1 (MQ=255)
                                                       tcGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATaa                                  >  2:6490280/1‑93 (MQ=255)
                                                       tcGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATaa                                  <  1:2444660/93‑1 (MQ=255)
                                                       tcGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATaa                                  >  1:5043324/1‑93 (MQ=255)
                                                        cGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATaa                                  <  2:7658556/93‑1 (MQ=255)
                                                         gTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACTAAACCGTTTGCGTGGAAATaaaa                                >  2:5516534/1‑93 (MQ=255)
                                                         gTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGACATaaaa                                >  2:786197/1‑93 (MQ=255)
                                                         gTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATaaaa                                >  2:499122/1‑93 (MQ=255)
                                                          tcttctAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAAt                               >  2:9483168/1‑93 (MQ=255)
                                                          tcttctAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAAt                               >  1:796086/1‑93 (MQ=255)
                                                          tcttctAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAAt                               >  2:8346813/1‑93 (MQ=255)
                                                           cttctAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATc                              <  1:6094889/93‑1 (MQ=255)
                                                            ttctAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCa                             >  2:4298273/1‑93 (MQ=255)
                                                             tctAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCAc                            >  1:1221895/1‑93 (MQ=255)
                                                               tAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCa                          <  2:2405982/93‑1 (MQ=255)
                                                                aaGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCAt                         <  2:1521141/93‑1 (MQ=255)
                                                                  gCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCg                       >  2:6253404/1‑93 (MQ=255)
                                                                   cTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGt                      >  2:1634830/1‑93 (MQ=255)
                                                                     ttCGGTGTACCCCAGGGGGGGGAACGAGCGTCAATATAACGAATCTGCTGCGCTGACGAAACCGTTTACGTAGAAATAAAATCACCATCgagt                    <  2:8982720/93‑4 (MQ=255)
                                                                      tCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGaa                   <  1:1658493/93‑1 (MQ=255)
                                                                      tCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGaa                   <  2:10039859/93‑1 (MQ=255)
                                                                        ggTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAAGCGTTTGCGTGGAAATAAAATCACCATCGTGAAtt                 <  2:8675460/93‑1 (MQ=255)
                                                                        ggTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAAtt                 <  1:3834353/93‑1 (MQ=255)
                                                                          tgtACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAg               >  1:5236791/1‑93 (MQ=255)
                                                                          tgtACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAg               >  1:1900521/1‑93 (MQ=255)
                                                                           gtACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGATTGCGTGGAAATAAAATCACCATCATGGATTAGc              >  2:568499/1‑93 (MQ=255)
                                                                             aCCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCaa            <  2:3242126/93‑1 (MQ=255)
                                                                              cccAAGGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCaa            <  2:4073926/93‑1 (MQ=255)
                                                                               ccAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTTACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAAcg          <  2:7508891/93‑1 (MQ=255)
                                                                               ccAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAAcg          >  1:3006725/1‑93 (MQ=255)
                                                                                cAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAAcgc         <  2:5914553/93‑1 (MQ=255)
                                                                                 aaGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCCCCATCGTGAATTAGCAAcgcg        <  2:8530316/93‑1 (MQ=255)
                                                                                 aaGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAAcgcg        >  1:4438283/1‑93 (MQ=255)
                                                                                     ggggggGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTgc     <  2:2541823/93‑1 (MQ=255)
                                                                                     ggggggGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTgc     <  1:9600735/93‑1 (MQ=255)
                                                                                       ggggGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTgccg   >  2:2893101/1‑93 (MQ=255)
                                                                                        ggggAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTgccgc  >  1:7194443/1‑93 (MQ=255)
                                                                                           |                                                                                         
GATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGC  >  NC_000913/2693516‑2693695

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAAT  >  NC_000913/2693513‑2693699
                                                                                              |                                                                                             
GTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGG                                                                                               >  SRR4302540.9478107/1‑94 (MQ=60)
    ATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACG                                                                                           >  SRR4302540.6127125/1‑94 (MQ=60)
    ATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACG                                                                                           <  SRR4302540.8341135/94‑1 (MQ=60)
       CGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGC                                                                                        <  SRR4302540.1776300/94‑1 (MQ=60)
        GGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGGACGGGCG                                                                                       >  SRR4302540.4522567/1‑94 (MQ=60)
        GGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCG                                                                                       >  SRR4302540.4862881/1‑94 (MQ=60)
        GGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCG                                                                                       >  SRR4302540.1662758/1‑94 (MQ=60)
         GAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGT                                                                                      <  SRR4302540.9416697/94‑1 (MQ=60)
          AATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTC                                                                                     >  SRR4302540.6402333/1‑94 (MQ=60)
           ATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGCACGGGCGTCT                                                                                    >  SRR4302540.9523232/1‑94 (MQ=60)
           ATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCA                                                                                    >  SRR4302540.9046893/1‑94 (MQ=60)
            TGCCGACAGTGCAGGCGAGCCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCAT                                                                                   <  SRR4302540.5892112/94‑1 (MQ=60)
            TGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCAT                                                                                   <  SRR4302540.4274514/94‑1 (MQ=60)
             GCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATT                                                                                  >  SRR4302540.7428710/1‑94 (MQ=60)
              CCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGCACGGGCGTCATTA                                                                                 >  SRR4302540.2676489/1‑94 (MQ=60)
              CCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTA                                                                                 <  SRR4302540.7239415/94‑1 (MQ=60)
               CGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTAT                                                                                <  SRR4302540.7102996/94‑1 (MQ=60)
               CGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTAT                                                                                >  SRR4302540.2521434/1‑94 (MQ=60)
                GACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGGACGGGCGTCATTATA                                                                               >  SRR4302540.6452566/1‑94 (MQ=60)
                GACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATA                                                                               >  SRR4302540.5000024/1‑94 (MQ=60)
                GACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATA                                                                               >  SRR4302540.8810217/1‑94 (MQ=60)
                GACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATA                                                                               >  SRR4302540.2276455/1‑94 (MQ=60)
                GACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATA                                                                               >  SRR4302540.2317672/1‑94 (MQ=60)
                CACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATA                                                                               <  SRR4302540.2967124/94‑1 (MQ=60)
                 ACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAA                                                                              >  SRR4302540.9497126/1‑94 (MQ=60)
                  CAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAAAGGGCGTCATTATAAA                                                                             >  SRR4302540.2987179/1‑94 (MQ=60)
                   AGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGTACGGGCGTCATTATAAAG                                                                            >  SRR4302540.1420921/1‑94 (MQ=60)
                   AGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAG                                                                            >  SRR4302540.3977961/1‑94 (MQ=60)
                    GTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGA                                                                           >  SRR4302540.8617102/1‑94 (MQ=60)
                     TGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAA                                                                          >  SRR4302540.10072219/1‑94 (MQ=60)
                     TGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAA                                                                          <  SRR4302540.9437146/94‑1 (MQ=60)
                     TGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAA                                                                          <  SRR4302540.9437147/94‑1 (MQ=60)
                      GCAGGCGAGCCACGCAGAATTTCCATCATACGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAAT                                                                         <  SRR4302540.4074398/94‑1 (MQ=60)
                      GCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAAT                                                                         >  SRR4302540.3287384/1‑94 (MQ=60)
                      GCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAAT                                                                         <  SRR4302540.4074399/94‑1 (MQ=60)
                      GCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAAT                                                                         >  SRR4302540.1244190/1‑94 (MQ=60)
                      GCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAAT                                                                         <  SRR4302540.6548570/94‑1 (MQ=60)
                       CAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGGACGGGCGTCATTATAAAGAATC                                                                        >  SRR4302540.2903385/1‑94 (MQ=60)
                       CAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATC                                                                        >  SRR4302540.4145967/1‑94 (MQ=60)
                        AGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCT                                                                       <  SRR4302540.330060/94‑1 (MQ=60)
                        AGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCT                                                                       >  SRR4302540.666437/1‑94 (MQ=60)
                        AGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCT                                                                       >  SRR4302540.6651384/1‑94 (MQ=60)
                         GGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTG                                                                      >  SRR4302540.3623871/1‑94 (MQ=60)
                         GGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTG                                                                      >  SRR4302540.1083797/1‑94 (MQ=60)
                         GGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTG                                                                      >  SRR4302540.7564433/1‑94 (MQ=60)
                           CGAACCACGCATAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGAT                                                                    <  SRR4302540.7957650/94‑1 (MQ=60)
                           CGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTCCCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGAT                                                                    <  SRR4302540.8538119/94‑1 (MQ=60)
                           CGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGAT                                                                    <  SRR4302540.96189/94‑1 (MQ=60)
                           CGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGAT                                                                    <  SRR4302540.7480119/94‑1 (MQ=60)
                           CGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGAT                                                                    >  SRR4302540.2016366/1‑94 (MQ=60)
                           CGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGAT                                                                    >  SRR4302540.2483260/1‑94 (MQ=60)
                            GAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGGACGGGCGTCATTATAAAGAATCTGATG                                                                   >  SRR4302540.5892530/1‑94 (MQ=60)
                            GAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATG                                                                   >  SRR4302540.5892528/1‑94 (MQ=60)
                            GAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATG                                                                   >  SRR4302540.5892529/1‑94 (MQ=60)
                             AACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGC                                                                  >  SRR4302540.8319699/1‑94 (MQ=60)
                             AACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGC                                                                  <  SRR4302540.3303010/94‑1 (MQ=60)
                             AACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGC                                                                  <  SRR4302540.3303008/94‑1 (MQ=60)
                             AACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGC                                                                  >  SRR4302540.2228031/1‑94 (MQ=60)
                              ACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGC                                                                  <  SRR4302540.782420/94‑1 (MQ=60)
                              ACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCG                                                                 >  SRR4302540.5741299/1‑94 (MQ=60)
                                CACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCT                                                               >  SRR4302540.6067179/1‑94 (MQ=60)
                                CACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCT                                                               >  SRR4302540.10013897/1‑94 (MQ=60)
                                CACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCT                                                               >  SRR4302540.6993604/1‑94 (MQ=60)
                                 ACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGGGTCATTATAAAGAATCTGATGCGCTG                                                              >  SRR4302540.6955587/1‑94 (MQ=60)
                                  CGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGA                                                             >  SRR4302540.9372470/1‑94 (MQ=60)
                                  CGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGA                                                             >  SRR4302540.10132130/1‑94 (MQ=60)
                                   GCAGAATTTCCACCAAAAGCCTCTGGCCTTCTAGGCTTTCGGTGTCCCCAGGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGAC                                                            <  SRR4302540.6483585/94‑1 (MQ=53)
                                    CAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACG                                                           >  SRR4302540.1708042/1‑94 (MQ=60)
                                     AGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGA                                                          >  SRR4302540.9739061/1‑94 (MQ=60)
                                        ATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGGACGGGCGTCATTATAAAAAATCTGATGGGATGAAGAAAC                                                       >  SRR4302540.9853951/1‑94 (MQ=60)
                                         TTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACC                                                      <  SRR4302540.6912222/94‑1 (MQ=60)
                                         TTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACC                                                      <  SRR4302540.3278500/94‑1 (MQ=60)
                                         TTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACC                                                      <  SRR4302540.4467280/94‑1 (MQ=60)
                                         TTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACC                                                      <  SRR4302540.8534404/94‑1 (MQ=60)
                                          TTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCG                                                     >  SRR4302540.6392059/1‑94 (MQ=60)
                                          TTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCG                                                     >  SRR4302540.6392058/1‑94 (MQ=60)
                                           TCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGT                                                    <  SRR4302540.2377581/94‑1 (MQ=60)
                                           TCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGT                                                    <  SRR4302540.5150683/94‑1 (MQ=60)
                                            CCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTT                                                   >  SRR4302540.3037094/1‑94 (MQ=60)
                                            CCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTT                                                   <  SRR4302540.323903/94‑1 (MQ=60)
                                            CCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTT                                                   <  SRR4302540.1528776/94‑1 (MQ=60)
                                             CATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTT                                                  <  SRR4302540.276857/94‑1 (MQ=60)
                                             CATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTT                                                  <  SRR4302540.9522882/94‑1 (MQ=60)
                                              ATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTG                                                 >  SRR4302540.7917033/1‑94 (MQ=60)
                                              ATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTG                                                 >  SRR4302540.4445964/1‑94 (MQ=60)
                                               TCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGC                                                <  SRR4302540.2689000/94‑1 (MQ=60)
                                               TCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGC                                                <  SRR4302540.5466576/94‑1 (MQ=60)
                                                CATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCG                                               >  SRR4302540.9379898/1‑94 (MQ=60)
                                                 ATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGGGTCATACTAAAGACTCTGATGCGCTGACGAACCCGTTTGCcg                                              >  SRR4302540.1752972/1‑92 (MQ=60)
                                                 ATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGT                                              >  SRR4302540.6722004/1‑94 (MQ=60)
                                                 ATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGT                                              >  SRR4302540.1752973/1‑94 (MQ=60)
                                                 ATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGT                                              <  SRR4302540.9211611/94‑1 (MQ=60)
                                                 ATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGT                                              >  SRR4302540.8398175/1‑94 (MQ=60)
                                                  TAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTG                                             <  SRR4302540.2340557/94‑1 (MQ=60)
                                                  TAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTG                                             <  SRR4302540.2574478/94‑1 (MQ=60)
                                                    AGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGA                                           <  SRR4302540.1960872/94‑1 (MQ=60)
                                                     GTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAA                                          >  SRR4302540.7658745/1‑94 (MQ=60)
                                                      TCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAA                                         <  SRR4302540.5997906/94‑1 (MQ=60)
                                                      TCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAA                                         <  SRR4302540.3164489/94‑1 (MQ=60)
                                                       CTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAAT                                        >  SRR4302540.5066986/1‑94 (MQ=60)
                                                       CTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAAT                                        >  SRR4302540.7090610/1‑94 (MQ=60)
                                                       CTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAAT                                        >  SRR4302540.2010623/1‑94 (MQ=60)
                                                        TCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATA                                       >  SRR4302540.5370253/1‑94 (MQ=60)
                                                         CTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAA                                      >  SRR4302540.7462248/1‑94 (MQ=60)
                                                         CTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAA                                      >  SRR4302540.5097876/1‑94 (MQ=60)
                                                          TCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAA                                     <  SRR4302540.9528736/94‑1 (MQ=60)
                                                          TCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAA                                     <  SRR4302540.2470990/94‑1 (MQ=60)
                                                          TCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAA                                     <  SRR4302540.952584/94‑1 (MQ=60)
                                                           CGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAA                                    <  SRR4302540.7006567/94‑1 (MQ=60)
                                                           CGTCTTCTAAGCTTGCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAA                                    <  SRR4302540.7006566/94‑1 (MQ=60)
                                                            GTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGGACGGGCGCCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAAT                                   >  SRR4302540.5160234/1‑94 (MQ=60)
                                                            GTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAAT                                   <  SRR4302540.3398363/94‑1 (MQ=60)
                                                            GTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAAT                                   >  SRR4302540.804543/1‑94 (MQ=60)
                                                            GTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAAT                                   >  SRR4302540.776865/1‑94 (MQ=60)
                                                            GTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAAT                                   <  SRR4302540.7344766/94‑1 (MQ=60)
                                                            GGCTTCTAAGCTGTCGGTGGACCCAAGGGGGGGGAACGGTCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAAT                                   <  SRR4302540.9729217/94‑1 (MQ=60)
                                                              CTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCA                                 <  SRR4302540.2463/94‑1 (MQ=60)
                                                              CTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCA                                 <  SRR4302540.6162728/94‑1 (MQ=60)
                                                               TTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGGGCCATTATAAAGAATATGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCAC                                >  SRR4302540.5588712/1‑94 (MQ=60)
                                                               TTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCAC                                <  SRR4302540.9451694/94‑1 (MQ=60)
                                                               TTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCAC                                >  SRR4302540.1234398/1‑94 (MQ=60)
                                                               TTCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCAC                                >  SRR4302540.3006437/1‑94 (MQ=60)
                                                               TTCTAAGCTGTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCAC                                <  SRR4302540.9162280/94‑1 (MQ=60)
                                                                TCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACC                               <  SRR4302540.2773318/94‑1 (MQ=60)
                                                                TCTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACC                               <  SRR4302540.6961134/94‑1 (MQ=60)
                                                                 CTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCA                              >  SRR4302540.9032411/1‑94 (MQ=60)
                                                                 CTAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCA                              >  SRR4302540.5625714/1‑94 (MQ=60)
                                                                  TAAGCTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCAT                             <  SRR4302540.4773575/94‑1 (MQ=60)
                                                                   tagctttcgggtgtacagAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATC                            <  SRR4302540.5894499/76‑1 (MQ=60)
                                                                      CTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTG                         >  SRR4302540.8630252/1‑94 (MQ=60)
                                                                      CTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTG                         >  SRR4302540.3733900/1‑94 (MQ=60)
                                                                      CTTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTG                         >  SRR4302540.6229437/1‑94 (MQ=60)
                                                                       TTTCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGA                        <  SRR4302540.9717903/94‑1 (MQ=60)
                                                                        TTCGGTGTACCCAAGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAAT                      >  SRR4302540.9203028/1‑94 (MQ=60)
                                                                         TCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAAT                      <  SRR4302540.9256015/94‑1 (MQ=60)
                                                                         TCGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAAT                      <  SRR4302540.1676565/94‑1 (MQ=60)
                                                                          CGGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATT                     >  SRR4302540.1223853/1‑94 (MQ=60)
                                                                           GGTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTA                    <  SRR4302540.3876077/94‑1 (MQ=60)
                                                                            GTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAG                   >  SRR4302540.5293914/1‑94 (MQ=60)
                                                                            GTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAG                   >  SRR4302540.6295725/1‑94 (MQ=60)
                                                                            GTGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAG                   >  SRR4302540.1921305/1‑94 (MQ=60)
                                                                             TGTACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGC                  >  SRR4302540.8608976/1‑94 (MQ=60)
                                                                                ACCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAAC               <  SRR4302540.4995275/94‑1 (MQ=60)
                                                                                 CCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCCCCATCGTGAATTAGCAACG              <  SRR4302540.8005943/94‑1 (MQ=60)
                                                                                 CCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACG              <  SRR4302540.7613238/94‑1 (MQ=60)
                                                                                 CCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACG              <  SRR4302540.1349708/94‑1 (MQ=60)
                                                                                 CCCAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACG              >  SRR4302540.3039823/1‑94 (MQ=60)
                                                                                   CAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCG            >  SRR4302540.4486381/1‑94 (MQ=60)
                                                                                   CAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCG            >  SRR4302540.5294724/1‑94 (MQ=60)
                                                                                   CAAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCG            >  SRR4302540.2797799/1‑94 (MQ=60)
                                                                                    AAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGT           >  SRR4302540.3808288/1‑94 (MQ=60)
                                                                                    AAGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATAACCATCGTGAATTAGCAACGCGT           >  SRR4302540.8140586/1‑94 (MQ=60)
                                                                                     AGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTG          >  SRR4302540.1843989/1‑94 (MQ=60)
                                                                                     AGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTG          <  SRR4302540.3926315/94‑1 (MQ=60)
                                                                                     AGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTG          <  SRR4302540.2962438/94‑1 (MQ=60)
                                                                                     AGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTG          >  SRR4302540.3458656/1‑94 (MQ=60)
                                                                                       GGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGC         >  SRR4302540.834693/1‑94 (MQ=60)
                                                                                        GGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCC        <  SRR4302540.9350391/94‑1 (MQ=60)
                                                                                        GGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCC        >  SRR4302540.5504653/1‑94 (MQ=60)
                                                                                        GGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCC        <  SRR4302540.9713992/94‑1 (MQ=60)
                                                                                          GGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGGAATAAAATCACAATCGTGAATTAGAAACGCGTGCCGC      >  SRR4302540.6568401/1‑94 (MQ=60)
                                                                                          GGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGC      >  SRR4302540.7274637/1‑94 (MQ=60)
                                                                                           GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATACAATGACCACCGTGAATaagacacccggcccgca     >  SRR4302540.2591742/1‑77 (MQ=60)
                                                                                           GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCACCGCGTGCCGCC     >  SRR4302540.2592024/1‑94 (MQ=60)
                                                                                            GGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCA    <  SRR4302540.93302/94‑1 (MQ=60)
                                                                                             GGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAA   >  SRR4302540.2231904/1‑94 (MQ=60)
                                                                                              GAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCCCCATCGTGAAATAGCAACACGGACCGCCAAT  >  SRR4302540.5208687/1‑94 (MQ=60)
                                                                                              GAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAAT  <  SRR4302540.1309152/94‑1 (MQ=60)
                                                                                              GAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAAT  >  SRR4302540.8101058/1‑94 (MQ=60)
                                                                                              |                                                                                             
GTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAAT  >  NC_000913/2693513‑2693699

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: