Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,694,050 |
A→G |
Y31C (TAC→TGC) |
yfhD → |
putative periplasmic binding transport protein |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,694,050 | 0 | A | G | 100.0%
| 950.2
/ NA
| 294 | Y31C (TAC→TGC) | yfhD | putative periplasmic binding transport protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (163/131); total (163/131) |
Only 100 of 308 total aligned reads displayed.
GAGCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTACCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTGGCGG > NC_000913/2693961‑2694139
|
aGCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTc < 1:9960642/93‑1 (MQ=255)
gCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCg > 2:3497372/1‑93 (MQ=255)
cACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCgg < 1:7200966/93‑1 (MQ=255)
aCCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGc > 2:2667681/1‑93 (MQ=255)
aCCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGc > 1:424314/1‑93 (MQ=255)
ttCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGGCGATTGCCTCGGCGTaa > 2:5370487/1‑93 (MQ=255)
ttCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTaa > 2:2528656/1‑93 (MQ=255)
ttCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTaa > 1:8863390/1‑93 (MQ=255)
ttaTACTCCCCTGACTTATAAAGAAATCAACAGGAAAACTTTTGGTCTTGATTTCGAACTTGCGAAAAAATTTGCCGAATGCCTCGGCGTaaa > 2:6813970/3‑93 (MQ=255)
cATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTaaaa > 1:2213705/1‑93 (MQ=255)
cATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTaaaa > 1:7485502/1‑93 (MQ=255)
aTACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAAc < 1:8124717/93‑1 (MQ=255)
aCTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTg > 1:2348104/1‑93 (MQ=255)
tCCCCTGACTTATAACGAAATCAAGGGGAACCCTTTTGGCCTGGATTACGAACTGGCAAACAAGTTTCCGAATTCCTTCGCCGTAAAACTaaa > 2:8228569/1‑93 (MQ=255)
tCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGaa > 2:4386293/1‑93 (MQ=255)
tCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGaa < 1:6958326/93‑1 (MQ=255)
cccTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAg < 2:5476392/93‑1 (MQ=255)
cTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTg < 2:2987941/93‑1 (MQ=255)
cTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTg < 1:2718518/93‑1 (MQ=255)
tGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGa < 2:1800910/93‑1 (MQ=255)
tGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGa > 2:7032673/1‑93 (MQ=255)
tGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGa > 2:2907548/1‑93 (MQ=255)
gACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGAc > 1:6077906/1‑93 (MQ=255)
aCTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGAcc < 2:6668890/93‑1 (MQ=255)
cTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCg < 2:3373932/93‑1 (MQ=255)
ttATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGt > 2:1694312/1‑93 (MQ=255)
ataACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGc > 1:9099830/1‑93 (MQ=255)
ataACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGc > 1:264598/1‑93 (MQ=255)
ataACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGc < 2:8585139/93‑1 (MQ=255)
cGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCa < 2:6909130/93‑1 (MQ=255)
aaTCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGaa < 1:8262340/93‑1 (MQ=255)
aaTCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGaa < 1:1010115/93‑1 (MQ=255)
aTCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAat > 1:938608/1‑93 (MQ=255)
cAACGGGAACCCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAatat < 2:1486466/93‑1 (MQ=255)
aaCGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATc > 1:4954838/1‑93 (MQ=255)
aCGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATca > 1:686883/1‑93 (MQ=255)
aCGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATca < 1:4405574/93‑1 (MQ=255)
aCGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATca > 2:8364031/1‑93 (MQ=255)
cGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATcag < 2:1776233/93‑1 (MQ=255)
ggAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATcagcc > 1:8671090/1‑93 (MQ=255)
ggAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATcagcc < 2:7962224/93‑1 (MQ=255)
gAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATcagcca > 2:1031288/1‑93 (MQ=255)
aaCCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATcagccagt > 1:6434095/1‑92 (MQ=255)
aCCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCt > 1:5531354/1‑93 (MQ=255)
cTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGt < 2:4907183/93‑1 (MQ=255)
cTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGt < 1:5917136/93‑1 (MQ=255)
ttttGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGtt < 2:634839/93‑1 (MQ=255)
ttttGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGtt > 1:9227115/1‑93 (MQ=255)
ttttGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCAAGCTGtt > 1:6711969/1‑93 (MQ=255)
tttGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGttt < 2:3023066/93‑1 (MQ=255)
tGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTga < 1:9532513/93‑1 (MQ=255)
tGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTga < 1:1179629/93‑1 (MQ=255)
ggCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTgac < 1:7097847/93‑1 (MQ=255)
ggCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTgac > 1:4798929/1‑93 (MQ=255)
tGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGaccacc > 1:4886158/1‑93 (MQ=255)
tGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGAcc > 2:9337755/1‑93 (MQ=255)
gATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCtt < 2:5843049/93‑1 (MQ=255)
gATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCtt > 2:3798757/1‑93 (MQ=255)
gATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCtt < 2:2208054/93‑1 (MQ=255)
aTTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTg > 1:6247894/1‑93 (MQ=255)
aCGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATa > 2:4087425/1‑93 (MQ=255)
aCGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATa > 2:121993/1‑93 (MQ=255)
cGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATaa < 2:922095/93‑1 (MQ=255)
cGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATaa < 2:7756176/93‑1 (MQ=255)
gAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAAt < 1:6644359/93‑1 (MQ=255)
gAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAAt > 2:6635801/1‑93 (MQ=255)
gAACTGGCGAAACAGTTTGCCGATTGCATCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAAt < 2:9779251/93‑1 (MQ=255)
aaCTGGCGAAACAGTTTGCCGTTTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATg > 1:2480896/1‑93 (MQ=255)
aaCTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATg > 1:1260442/1‑93 (MQ=255)
accggCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATgg < 1:4726378/90‑1 (MQ=255)
aCTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATgg > 1:9882273/1‑93 (MQ=255)
aCTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATgg > 1:5353286/1‑93 (MQ=255)
tGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTa > 1:5073833/1‑93 (MQ=255)
tGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTa > 1:3889348/1‑93 (MQ=255)
tGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTa < 1:5220964/93‑1 (MQ=255)
tGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTa < 2:2293460/93‑1 (MQ=255)
tGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTa < 2:4675317/93‑1 (MQ=255)
ggCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTaa < 1:9607613/93‑1 (MQ=255)
ggCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTaa < 2:3679311/93‑1 (MQ=255)
ggCGAAACAGTATGCCGATTGCCTCGTCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTaa < 2:910680/93‑1 (MQ=255)
gCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAAc > 1:3157447/1‑93 (MQ=255)
cGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGCTAATGGTAACg > 2:7312060/1‑93 (MQ=255)
aaaCAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGcc > 1:5495358/1‑93 (MQ=255)
aaaCAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGcc > 2:6270335/1‑93 (MQ=255)
aaaCAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGcc > 2:1939831/1‑93 (MQ=255)
aaaCAGTTTGCCGATTGCC‑CGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATAAGCCAGCTGTTTGAAGACCTTGATAATGGTAACGCCg > 1:10009257/1‑93 (MQ=255)
aaCAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCg > 2:9451538/1‑93 (MQ=255)
cAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGAc < 2:8163877/93‑1 (MQ=255)
aGTTGGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGAcc < 2:2370851/93‑1 (MQ=255)
gTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACct > 2:4717342/1‑93 (MQ=255)
gTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACct > 2:4633016/1‑93 (MQ=255)
gTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACct > 2:1247215/1‑93 (MQ=255)
gTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACct > 2:6114354/1‑93 (MQ=255)
tttGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACctg > 2:4228722/1‑93 (MQ=255)
tGCCGATTGCCTCGGCGTATAACTGAAAGTGACCGTGCGGCAGCATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACctgct < 2:8965999/93‑1 (MQ=255)
tGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACctgct > 1:1654881/1‑93 (MQ=255)
ccGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTgg > 1:2948637/1‑93 (MQ=255)
cGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTggc < 2:7241977/93‑1 (MQ=255)
gATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGCCCTGCTggcg > 2:322430/1‑93 (MQ=255)
aTTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTggcgg > 1:3384615/1‑93 (MQ=255)
|
GAGCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTACCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTGGCGG > NC_000913/2693961‑2694139
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTGTGAGCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTACCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTGGCGGCAGG > NC_000913/2693957‑2694143
|
GTGTGAGCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTG < SRR4302540.5820985/94‑1 (MQ=60)
GTGTGAGCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTG < SRR4302540.7735246/94‑1 (MQ=60)
GTGTGAGCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTG > SRR4302540.9631875/1‑94 (MQ=60)
GTGTGAGCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTG < SRR4302540.7065572/94‑1 (MQ=60)
GTGTGAGCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTG < SRR4302540.7735247/94‑1 (MQ=60)
TGTGAGCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGC > SRR4302540.6162102/1‑94 (MQ=60)
GTGAGCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCC < SRR4302540.4233924/94‑1 (MQ=60)
GTGAGCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCC < SRR4302540.4334903/94‑1 (MQ=60)
TGAGCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCT > SRR4302540.8226174/1‑94 (MQ=60)
GAGCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTC > SRR4302540.5759851/1‑94 (MQ=60)
AGCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCG > SRR4302540.1120170/1‑94 (MQ=60)
AGCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCG < SRR4302540.10076871/94‑1 (MQ=60)
CACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGC > SRR4302540.428784/1‑94 (MQ=60)
CACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGC < SRR4302540.7281249/94‑1 (MQ=60)
CCCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCG < SRR4302540.2311227/94‑1 (MQ=60)
ACCATTCATCCTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCG < SRR4302540.2311226/94‑1 (MQ=60)
CATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTA > SRR4302540.2014318/1‑94 (MQ=60)
ATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAA > SRR4302540.8965955/1‑94 (MQ=60)
ATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAA > SRR4302540.3131903/1‑94 (MQ=60)
ATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAA > SRR4302540.9266553/1‑94 (MQ=60)
ATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTCTGGCCTGGATTACGAACTGGCGAAAGAGTTTGCCGATTGCGTCGGCGTCA > SRR4302540.8965954/1‑94 (MQ=60)
TTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAA < SRR4302540.7565828/94‑1 (MQ=60)
TCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAA > SRR4302540.2237601/1‑94 (MQ=60)
TCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAA > SRR4302540.7569057/1‑94 (MQ=60)
CATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAAC < SRR4302540.479991/94‑1 (MQ=60)
CATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAAC > SRR4302540.5026415/1‑94 (MQ=60)
CATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAAC < SRR4302540.2588215/94‑1 (MQ=60)
ATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACT < SRR4302540.8219015/94‑1 (MQ=60)
TACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTG < SRR4302540.6623300/94‑1 (MQ=60)
TACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTG > SRR4302540.2373393/1‑94 (MQ=60)
ACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGACCTGGCGAAGAAGTTTGCCGATTGCCTCGGCGTcacactca > SRR4302540.5682295/1‑86 (MQ=60)
ACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGA > SRR4302540.8517753/1‑94 (MQ=60)
CTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAA > SRR4302540.6073490/1‑94 (MQ=60)
CTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAA < SRR4302540.3872837/94‑1 (MQ=60)
TCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAA < SRR4302540.7035735/94‑1 (MQ=60)
CCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAG > SRR4302540.5011678/1‑94 (MQ=60)
CCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAG < SRR4302540.8690148/94‑1 (MQ=60)
CCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTG < SRR4302540.9747294/94‑1 (MQ=60)
CCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTG > SRR4302540.10090324/1‑94 (MQ=60)
CCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTG < SRR4302540.3876661/94‑1 (MQ=60)
CTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGA > SRR4302540.6127153/1‑94 (MQ=60)
CTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGA > SRR4302540.10065105/1‑94 (MQ=60)
CTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGA < SRR4302540.2747828/94‑1 (MQ=60)
TGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGAC > SRR4302540.6145489/1‑94 (MQ=60)
TGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGAC > SRR4302540.5558909/1‑94 (MQ=60)
TATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGC > SRR4302540.9209171/1‑94 (MQ=60)
TATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGC > SRR4302540.267190/1‑94 (MQ=60)
ATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCG < SRR4302540.7248742/94‑1 (MQ=60)
AATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAAT < SRR4302540.8358353/94‑1 (MQ=60)
AATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAAT < SRR4302540.1020357/94‑1 (MQ=60)
AATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAAT > SRR4302540.948430/1‑94 (MQ=60)
AATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAAT < SRR4302540.2702452/94‑1 (MQ=60)
ATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATA < SRR4302540.7804451/94‑1 (MQ=60)
ATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATA > SRR4302540.5563988/1‑94 (MQ=60)
ATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATA < SRR4302540.8365895/94‑1 (MQ=60)
ATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATA > SRR4302540.297088/1‑94 (MQ=60)
CAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATC > SRR4302540.5008375/1‑94 (MQ=60)
AACGGGAACCCTTTTGGCCTAGATTACGAACTGGCGAAACAGTTTGCAGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCA < SRR4302540.4871999/94‑1 (MQ=60)
AACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCA > SRR4302540.694258/1‑94 (MQ=60)
AACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCA < SRR4302540.9650670/94‑1 (MQ=60)
ACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAG < SRR4302540.4453338/94‑1 (MQ=60)
CGGGAATCCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGC < SRR4302540.3217553/94‑1 (MQ=60)
GGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCC > SRR4302540.8771810/1‑94 (MQ=60)
GAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAG < SRR4302540.10114429/94‑1 (MQ=60)
GAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAG < SRR4302540.220271/94‑1 (MQ=60)
GAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACAGTGCGGCAGAATATCAGCCAG > SRR4302540.7160338/1‑94 (MQ=60)
AAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGT > SRR4302540.6505714/1‑94 (MQ=60)
AACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCT > SRR4302540.5592272/1‑94 (MQ=60)
ACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTG > SRR4302540.8791214/1‑94 (MQ=60)
ACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTG < SRR4302540.2707414/94‑1 (MQ=60)
ACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTG < SRR4302540.4761910/94‑1 (MQ=60)
CTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTT < SRR4302540.5982501/94‑1 (MQ=60)
CTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTT > SRR4302540.9337743/1‑94 (MQ=60)
CTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTT < SRR4302540.9700620/94‑1 (MQ=60)
CTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTT > SRR4302540.9431063/1‑94 (MQ=60)
CTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTT > SRR4302540.7131489/1‑94 (MQ=60)
CTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTT > SRR4302540.6786038/1‑94 (MQ=60)
CTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCAAGCTGTT > SRR4302540.6786037/1‑94 (MQ=60)
TTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGA < SRR4302540.5364786/94‑1 (MQ=60)
TTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGA < SRR4302540.1243339/94‑1 (MQ=60)
TGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGAC < SRR4302540.9645363/94‑1 (MQ=60)
TGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGAC > SRR4302540.4850289/1‑94 (MQ=60)
TGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGAC < SRR4302540.1191815/94‑1 (MQ=60)
TGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGATGTTTGAA > SRR4302540.4850290/1‑94 (MQ=60)
GGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACG > SRR4302540.2815871/1‑94 (MQ=60)
GGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACG < SRR4302540.7176827/94‑1 (MQ=60)
GCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGA < SRR4302540.10018948/94‑1 (MQ=60)
GCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGA > SRR4302540.8002096/1‑94 (MQ=60)
CTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGGCGCCC > SRR4302540.4383779/1‑94 (MQ=60)
CTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACC > SRR4302540.2626767/1‑94 (MQ=60)
CTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACC > SRR4302540.6501369/1‑94 (MQ=60)
CTGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACCACC > SRR4302540.4938651/1‑94 (MQ=60)
TGGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCT < SRR4302540.6760412/94‑1 (MQ=60)
GGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTT > SRR4302540.4958884/1‑94 (MQ=60)
GGATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTT < SRR4302540.10138405/94‑1 (MQ=60)
GATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTG > SRR4302540.6317426/1‑94 (MQ=60)
GATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTG > SRR4302540.6317427/1‑94 (MQ=60)
ATTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGA < SRR4302540.6995679/94‑1 (MQ=60)
TTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGAT < SRR4302540.7000969/94‑1 (MQ=60)
TTACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGAT > SRR4302540.5478363/1‑94 (MQ=60)
TACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATA > SRR4302540.677975/1‑94 (MQ=60)
TACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATA < SRR4302540.9140491/94‑1 (MQ=60)
TACGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATA < SRR4302540.7534156/94‑1 (MQ=60)
CGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAAT < SRR4302540.9409442/94‑1 (MQ=60)
CGAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAAT < SRR4302540.2392195/94‑1 (MQ=60)
CGAACGGGCGAAACAGTTTGCGGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAAT < SRR4302540.1421445/94‑1 (MQ=60)
GAACTGGCGAAACAGTTTGCCGTTTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATG > SRR4302540.2507624/1‑94 (MQ=60)
GAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATG > SRR4302540.1273370/1‑94 (MQ=60)
GAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATG < SRR4302540.6717875/94‑1 (MQ=60)
GAACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATG > SRR4302540.3231361/1‑94 (MQ=60)
AACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGG > SRR4302540.3970468/1‑94 (MQ=60)
AACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGG > SRR4302540.9997660/1‑94 (MQ=60)
AACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGG > SRR4302540.5412062/1‑94 (MQ=60)
AACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGG > SRR4302540.5412066/1‑94 (MQ=60)
actcgcgacgcacTTTGCCGATTGGCTCGGGGTAAAACCGAAAGTGCCCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGT < SRR4302540.4776859/81‑1 (MQ=60)
ACTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGT < SRR4302540.6207955/94‑1 (MQ=60)
ACCGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGT < SRR4302540.4776858/94‑1 (MQ=60)
CTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCCGCTGTTTGACGACCTTGATAATGGTA > SRR4302540.5128689/1‑94 (MQ=60)
CTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTA > SRR4302540.5128688/1‑94 (MQ=60)
CTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTA > SRR4302540.9153814/1‑94 (MQ=60)
CTGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTA > SRR4302540.3931578/1‑94 (MQ=60)
TGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAA < SRR4302540.5277882/94‑1 (MQ=60)
TGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAA > SRR4302540.5239351/1‑94 (MQ=60)
TGGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAA > SRR4302540.4994398/1‑94 (MQ=60)
GGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAAC < SRR4302540.9720917/94‑1 (MQ=60)
GGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAAC < SRR4302540.4422540/94‑1 (MQ=60)
GGCGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAAC > SRR4302540.3191809/1‑94 (MQ=60)
CGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGCCCTTGATAATGGTAACGC > SRR4302540.657968/1‑94 (MQ=60)
CGAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGC > SRR4302540.347442/1‑94 (MQ=60)
GAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCC > SRR4302540.1074864/1‑94 (MQ=60)
GAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCC > SRR4302540.6176302/1‑94 (MQ=60)
GAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCC < SRR4302540.3967845/94‑1 (MQ=60)
GAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCC > SRR4302540.5555860/1‑94 (MQ=60)
GAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCC > SRR4302540.10125812/1‑94 (MQ=60)
GAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCC < SRR4302540.3073380/94‑1 (MQ=60)
GAAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCC > SRR4302540.9518098/1‑94 (MQ=60)
GAAACAGTTTGCCGATTGCC‑CGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATAAGCCAGCTGTTTGAAGACCTTGATAATGGTAACGCCG > SRR4302540.10125811/1‑94 (MQ=60)
AAACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGCGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCG < SRR4302540.4574626/94‑1 (MQ=60)
AAACAGTTTGCCGATTGCCTCGGCGAAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCG > SRR4302540.9628062/1‑94 (MQ=60)
AACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGA > SRR4302540.4382020/1‑94 (MQ=60)
ACAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGAC < SRR4302540.5372876/94‑1 (MQ=60)
CAGTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACC < SRR4302540.8326398/94‑1 (MQ=60)
GTTTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTG < SRR4302540.7280699/94‑1 (MQ=60)
TTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCT > SRR4302540.1198406/1‑94 (MQ=60)
TTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCT > SRR4302540.1672910/1‑94 (MQ=60)
TTGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCT > SRR4302540.1672911/1‑94 (MQ=60)
TGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTG > SRR4302540.23992/1‑94 (MQ=60)
TGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTG > SRR4302540.5684306/1‑94 (MQ=60)
TGCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTAGACGACCTTGATAATGGTAACGCCGACCTGCTG > SRR4302540.9815360/1‑94 (MQ=60)
GCCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTGG > SRR4302540.2981086/1‑94 (MQ=60)
CCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTGGC > SRR4302540.9213810/1‑94 (MQ=60)
CCGATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTGGC > SRR4302540.6879758/1‑94 (MQ=60)
GATTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTGGCGG > SRR4302540.3421552/1‑94 (MQ=60)
TTGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTGGCGGCA < SRR4302540.7830191/94‑1 (MQ=60)
TGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGGCGACCTTGATAATGGTAACGCCGACCTGCTGGCGGCAG < SRR4302540.5512223/94‑1 (MQ=60)
TGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTGGCGGCAG > SRR4302540.1979711/1‑94 (MQ=60)
TGCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTGGCGGCAG > SRR4302540.6979055/1‑94 (MQ=60)
TCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTGGCGGCAGG < SRR4302540.7700037/94‑1 (MQ=60)
GCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTGGCGGCAGG > SRR4302540.4302093/1‑94 (MQ=60)
GCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTGGCGGCAGG > SRR4302540.4302092/1‑94 (MQ=60)
GCCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTGGCGGCAGG < SRR4302540.7972991/94‑1 (MQ=60)
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GTGTGAGCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTACCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTGGCGGCAGG > NC_000913/2693957‑2694143
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |