Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,720,435 A→G L821L (TTA→TTG)  yfiQ → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,720,4350AG100.0% 1328.0 / NA 408L821L (TTA→TTG) yfiQhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (193/215);  total (193/215)

Only 100 of 415 total aligned reads displayed.

AGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTAGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAACAA  >  NC_000913/2720345‑2720524
                                                                                          |                                                                                         
 gagaTCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGc                                                                                        >  1:5097837/1‑93 (MQ=255)
  agaTCCTAGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCt                                                                                       >  2:6563313/1‑93 (MQ=255)
   gaTCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCtt                                                                                      <  1:6042702/93‑1 (MQ=255)
    aTCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTa                                                                                     >  2:2189311/1‑93 (MQ=255)
     tCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAg                                                                                    >  1:1914622/1‑93 (MQ=255)
     tCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAg                                                                                    >  2:8287149/1‑93 (MQ=255)
      ccTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAgg                                                                                   <  2:6208364/93‑1 (MQ=255)
       cTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGt                                                                                  >  2:1472828/1‑93 (MQ=255)
       cTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGt                                                                                  <  1:4444869/93‑1 (MQ=255)
        tCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCATAGGGGTGGGCGTAGGTc                                                                                 >  2:8949985/1‑93 (MQ=255)
         cGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCg                                                                                <  1:2968243/93‑1 (MQ=255)
          ggCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGa                                                                               <  2:8583694/93‑1 (MQ=255)
          ggCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGa                                                                               <  2:7375722/93‑1 (MQ=255)
          cgCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGa                                                                               <  1:7002423/92‑1 (MQ=255)
           gCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGAc                                                                              >  2:5499573/1‑93 (MQ=255)
             gTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATGTCAAAGGGTTGGGCTTAGGTCGACGc                                                                            >  1:3899231/1‑93 (MQ=255)
             gTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTcgccgc                                                                            >  1:4800809/1‑93 (MQ=255)
             gTCACGCGTGCGATTTCCGATCCTGATAAAATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGc                                                                            <  1:1546259/93‑1 (MQ=255)
              tCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCt                                                                           >  1:5208429/1‑93 (MQ=255)
              tCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCt                                                                           <  2:7921787/93‑1 (MQ=255)
                aCGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTa                                                                         <  2:614175/93‑1 (MQ=255)
                aCGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTa                                                                         <  1:3725103/93‑1 (MQ=255)
                 cgcgTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTaa                                                                        >  1:8509988/1‑93 (MQ=255)
                 cgcgTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTaa                                                                        >  2:4611040/1‑93 (MQ=255)
                   cgTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATg                                                                      >  1:7612622/1‑93 (MQ=255)
                    gTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTAGACGCTTAATgg                                                                     >  2:9545548/1‑93 (MQ=255)
                     tGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGa                                                                    >  2:8858644/1‑93 (MQ=255)
                      gCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGaa                                                                   <  1:4150094/93‑1 (MQ=255)
                       cGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGaaa                                                                  <  2:5854667/93‑1 (MQ=255)
                        gATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGaaaa                                                                 <  1:9187899/93‑1 (MQ=255)
                         aTTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAg                                                                >  1:778588/1‑93 (MQ=255)
                         aTTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAg                                                                <  2:2932070/93‑1 (MQ=255)
                              cGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGAt                                                           >  1:1219700/1‑93 (MQ=255)
                                aTCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTa                                                         <  2:2369579/93‑1 (MQ=255)
                                  ccTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTAcc                                                       <  1:9266880/93‑1 (MQ=255)
                                    tGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAGGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCta                                                     <  2:3743393/93‑1 (MQ=255)
                                    tGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCta                                                     >  1:1357026/1‑93 (MQ=255)
                                    tGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCta                                                     <  1:3295167/93‑1 (MQ=255)
                                     gATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCtat                                                    >  2:1975112/1‑93 (MQ=255)
                                      aTAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCtata                                                   <  1:2262403/93‑1 (MQ=255)
                                      aTAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCtata                                                   <  1:7319639/93‑1 (MQ=255)
                                      aTAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCtata                                                   <  1:3458951/93‑1 (MQ=255)
                                       tAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGGTGATTACCTATAc                                                  >  1:6345999/1‑93 (MQ=255)
                                         aCATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATAcgc                                                <  2:5972405/93‑1 (MQ=255)
                                         aCATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATAcgc                                                <  2:4728632/93‑1 (MQ=255)
                                          cATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATAcgcg                                               <  2:3997309/93‑1 (MQ=255)
                                           aTCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGTGTTGGGCTTAGGTCGCCGCTTAATGGAAAAGTTGATTACCTATACGCga                                              >  1:8312820/1‑93 (MQ=255)
                                           aTCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCga                                              >  2:9767791/1‑93 (MQ=255)
                                            tCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCgag                                             >  2:1615731/1‑93 (MQ=255)
                                            tCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCgag                                             >  2:7010343/1‑93 (MQ=255)
                                             cGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCgaga                                            <  1:6169485/93‑1 (MQ=255)
                                              gATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGAt                                           >  2:3313248/1‑93 (MQ=255)
                                              gATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGAt                                           <  2:608522/93‑1 (MQ=255)
                                                tGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCa                                         <  1:6470500/93‑1 (MQ=255)
                                                tGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCa                                         <  2:3546478/93‑1 (MQ=255)
                                                tGCCGAATTTGCTCTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTGAACGCGAGATCa                                         <  1:9881301/93‑1 (MQ=255)
                                                    gAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGa                                     >  2:5016819/1‑93 (MQ=255)
                                                    gAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGa                                     <  2:7791111/93‑1 (MQ=255)
                                                     aaTTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGAc                                    <  2:4910998/93‑1 (MQ=255)
                                                      aTTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGGCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACt                                   <  2:572824/93‑1 (MQ=255)
                                                         tGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACa                                <  1:2470363/93‑1 (MQ=255)
                                                          gCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACaa                               <  1:8737518/93‑1 (MQ=255)
                                                          gCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACaa                               <  2:6899671/93‑1 (MQ=255)
                                                          gCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACaa                               <  1:5557195/93‑1 (MQ=255)
                                                           cTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAAc                              >  2:1019843/1‑93 (MQ=255)
                                                            tGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACg                             >  1:1967134/1‑93 (MQ=255)
                                                            tGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACg                             >  1:10012982/1‑93 (MQ=255)
                                                            tGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACg                             >  1:996862/1‑93 (MQ=255)
                                                             gTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGt                            >  1:5755893/1‑93 (MQ=255)
                                                             gTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGt                            >  2:5378313/1‑93 (MQ=255)
                                                              tACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTc                           >  2:2273381/1‑93 (MQ=255)
                                                              tACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTc                           >  2:7031849/1‑93 (MQ=255)
                                                              tACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTc                           >  2:680118/1‑93 (MQ=255)
                                                              tACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTc                           >  1:6659491/1‑93 (MQ=255)
                                                              tACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTc                           <  1:6568260/93‑1 (MQ=255)
                                                               aCTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCt                          <  1:3995797/93‑1 (MQ=255)
                                                                 tGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGa                        >  1:9563136/1‑93 (MQ=255)
                                                                  ggTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGaa                       <  2:2796299/93‑1 (MQ=255)
                                                                   gTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAAt                      <  2:907957/93‑1 (MQ=255)
                                                                       gCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTa                  <  2:4459441/93‑1 (MQ=255)
                                                                        cTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTAt                 <  1:6728858/93‑1 (MQ=255)
                                                                        cTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTAt                 >  2:9288785/1‑93 (MQ=255)
                                                                        cTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTAt                 >  2:8406121/1‑93 (MQ=255)
                                                                          cGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTa               <  1:6130197/93‑1 (MQ=255)
                                                                          cGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTa               <  1:5381138/93‑1 (MQ=255)
                                                                           ggATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTAc              <  2:1129917/93‑1 (MQ=255)
                                                                           ggATCTCAAAGGGTTGGGCTTAGGGCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTag              >  2:8126954/1‑92 (MQ=255)
                                                                             aTCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGa            <  1:7160465/93‑1 (MQ=255)
                                                                             aTCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGa            <  1:2348118/93‑1 (MQ=255)
                                                                              tctcAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGAt           >  1:807476/1‑93 (MQ=255)
                                                                               ctcAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATg          >  2:1809489/1‑93 (MQ=255)
                                                                               ctcAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATg          >  1:8912881/1‑93 (MQ=255)
                                                                                tcAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGc         >  1:163598/1‑93 (MQ=255)
                                                                                 cAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGcc        >  1:5865893/1‑93 (MQ=255)
                                                                                   aaGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCaa      >  2:4175414/1‑93 (MQ=255)
                                                                                    aGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCaaa     <  2:4230283/93‑1 (MQ=255)
                                                                                     aggTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAAc    <  2:7099357/92‑1 (MQ=255)
                                                                                      ggTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACGACGTCTGAATGGTATTACGATGCCAAACa   >  2:6395161/1‑93 (MQ=255)
                                                                                      ggTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAACa   >  1:5659484/1‑93 (MQ=255)
                                                                                       gTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAACaa  >  1:9461128/1‑93 (MQ=255)
                                                                                          |                                                                                         
AGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTAGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAACAA  >  NC_000913/2720345‑2720524

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 230 total aligned reads displayed.
GGAAGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTAGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAACAATCGT  >  NC_000913/2720342‑2720528
                                                                                             |                                                                                             
GGAAGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTG                                                                                               <  SRR4302540.9278863/94‑1 (MQ=60)
GGAAGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTG                                                                                               >  SRR4302540.8836645/1‑94 (MQ=60)
GGAAGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTG                                                                                               <  SRR4302540.4302397/94‑1 (MQ=60)
GGAAGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTG                                                                                               >  SRR4302540.3643087/1‑94 (MQ=60)
GGAAGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTG                                                                                               >  SRR4302540.3643086/1‑94 (MQ=60)
GGAAGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTG                                                                                               <  SRR4302540.4296053/94‑1 (MQ=60)
GGAAGAGAGCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTG                                                                                               <  SRR4302540.4302396/94‑1 (MQ=60)
 GAAGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGG                                                                                              <  SRR4302540.9193347/94‑1 (MQ=60)
 GAAGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGG                                                                                              <  SRR4302540.8135/94‑1 (MQ=60)
 GAAGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGG                                                                                              <  SRR4302540.4148431/94‑1 (MQ=60)
 GAAGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGG                                                                                              >  SRR4302540.460847/1‑94 (MQ=60)
  AAGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGTGTTGGG                                                                                             >  SRR4302540.620617/1‑94 (MQ=60)
   AGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGC                                                                                            >  SRR4302540.5153004/1‑94 (MQ=60)
   AGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGC                                                                                            <  SRR4302540.1965345/94‑1 (MQ=60)
   AGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGC                                                                                            >  SRR4302540.5153005/1‑94 (MQ=60)
   AGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGC                                                                                            <  SRR4302540.6558488/94‑1 (MQ=60)
    GAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCT                                                                                           <  SRR4302540.6660548/94‑1 (MQ=60)
    GAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCT                                                                                           >  SRR4302540.6860539/1‑94 (MQ=60)
     AGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTT                                                                                          <  SRR4302540.998958/94‑1 (MQ=60)
      GATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTCCTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTA                                                                                         >  SRR4302540.9789970/1‑94 (MQ=60)
      GATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTA                                                                                         <  SRR4302540.5843833/94‑1 (MQ=60)
      GATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTA                                                                                         <  SRR4302540.6109819/94‑1 (MQ=60)
      GATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGATTCGCTCGGATCTCAAAGGGTTGGGCTTA                                                                                         >  SRR4302540.3136963/1‑94 (MQ=60)
       ATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAG                                                                                        <  SRR4302540.9537527/94‑1 (MQ=60)
       ATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAG                                                                                        >  SRR4302540.1935522/1‑94 (MQ=60)
        TCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGG                                                                                       <  SRR4302540.521944/94‑1 (MQ=60)
        TCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGG                                                                                       >  SRR4302540.7347979/1‑94 (MQ=60)
        GCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGG                                                                                       <  SRR4302540.5512334/94‑1 (MQ=60)
         CCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGT                                                                                      <  SRR4302540.9012723/94‑1 (MQ=60)
         CCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGT                                                                                      <  SRR4302540.1864688/94‑1 (MQ=60)
          CTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTC                                                                                     <  SRR4302540.7578796/94‑1 (MQ=60)
          CTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTC                                                                                     <  SRR4302540.4493039/94‑1 (MQ=60)
          CTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTC                                                                                     <  SRR4302540.3413760/94‑1 (MQ=60)
          CTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTC                                                                                     <  SRR4302540.795003/94‑1 (MQ=60)
            CGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGA                                                                                   <  SRR4302540.3001024/94‑1 (MQ=60)
             GGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGAC                                                                                  <  SRR4302540.689656/94‑1 (MQ=60)
             GGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGAC                                                                                  <  SRR4302540.4404475/94‑1 (MQ=60)
             GGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGAC                                                                                  <  SRR4302540.9355139/94‑1 (MQ=60)
             GGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGAC                                                                                  >  SRR4302540.6348714/1‑94 (MQ=60)
             CGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGAC                                                                                  <  SRR4302540.7080121/94‑1 (MQ=60)
               CGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATGTCAAAGGGTTGGGCTTAGGTCGACGC                                                                                >  SRR4302540.3941544/1‑94 (MQ=60)
               CGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGCCGC                                                                                >  SRR4302540.4852186/1‑94 (MQ=60)
               CGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGC                                                                                >  SRR4302540.10044597/1‑94 (MQ=60)
                GTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCT                                                                               >  SRR4302540.7233668/1‑94 (MQ=60)
                GTCACGCGTGCGATTTCCGATCCTGATAAAATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCT                                                                               <  SRR4302540.1563319/94‑1 (MQ=60)
                 TCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTT                                                                              <  SRR4302540.1176382/94‑1 (MQ=60)
                  CACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTA                                                                             <  SRR4302540.4029337/94‑1 (MQ=60)
                  CACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTA                                                                             >  SRR4302540.3688490/1‑94 (MQ=60)
                  CACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTA                                                                             >  SRR4302540.1424667/1‑94 (MQ=60)
                   ACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAA                                                                            >  SRR4302540.8608886/1‑94 (MQ=60)
                   ACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAA                                                                            <  SRR4302540.6694921/94‑1 (MQ=60)
                   ACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAA                                                                            >  SRR4302540.8608885/1‑94 (MQ=60)
                    CGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAAT                                                                           <  SRR4302540.1251000/94‑1 (MQ=60)
                     GCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATG                                                                          >  SRR4302540.6136951/1‑94 (MQ=60)
                     GCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATG                                                                          >  SRR4302540.7698183/1‑94 (MQ=60)
                      CGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGG                                                                         >  SRR4302540.928589/1‑94 (MQ=60)
                       GTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTGCTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGA                                                                        >  SRR4302540.6765540/1‑94 (MQ=60)
                       GTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGA                                                                        >  SRR4302540.1496177/1‑94 (MQ=60)
                         GCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAA                                                                      <  SRR4302540.4195031/94‑1 (MQ=60)
                           GATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAG                                                                    >  SRR4302540.786888/1‑94 (MQ=60)
                           GATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAG                                                                    <  SRR4302540.9298084/94‑1 (MQ=60)
                           GATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAG                                                                    <  SRR4302540.8687404/94‑1 (MQ=60)
                            ATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGT                                                                   >  SRR4302540.6193287/1‑94 (MQ=60)
                            ATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACACTTAATGGAAAAGT                                                                   >  SRR4302540.5777061/1‑94 (MQ=60)
                             TTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTT                                                                  <  SRR4302540.6220532/94‑1 (MQ=60)
                             TTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTT                                                                  >  SRR4302540.5953915/1‑94 (MQ=60)
                              TTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTG                                                                 >  SRR4302540.8686300/1‑94 (MQ=60)
                               TCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGA                                                                <  SRR4302540.4078884/94‑1 (MQ=60)
                                CCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGAT                                                               <  SRR4302540.9721270/94‑1 (MQ=60)
                                CCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGAT                                                               >  SRR4302540.1232182/1‑94 (MQ=60)
                                 CGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATT                                                              <  SRR4302540.9622532/94‑1 (MQ=60)
                                 CGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATT                                                              <  SRR4302540.9622531/94‑1 (MQ=60)
                                 CGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATT                                                              <  SRR4302540.5165394/94‑1 (MQ=60)
                                 CGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATT                                                              >  SRR4302540.4932778/1‑94 (MQ=60)
                                  GATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTA                                                             <  SRR4302540.2299628/94‑1 (MQ=60)
                                  GATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTA                                                             <  SRR4302540.1980193/94‑1 (MQ=60)
                                   ATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTAC                                                            >  SRR4302540.654876/1‑94 (MQ=60)
                                   ATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGCTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTAC                                                            >  SRR4302540.8421882/1‑94 (MQ=60)
                                      CTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTcacta                                                         >  SRR4302540.4124056/1‑89 (MQ=60)
                                      CTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTA                                                         >  SRR4302540.4124057/1‑94 (MQ=60)
                                      CTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTA                                                         >  SRR4302540.1371336/1‑94 (MQ=60)
                                       ctagaaccgcgcttCCGAATTTGCTGGACTTGTTCGCTCGGATCTCAAAGGGTGGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTAT                                                        <  SRR4302540.7800623/80‑1 (MQ=60)
                                       TGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTAT                                                        <  SRR4302540.7800477/94‑1 (MQ=60)
                                       TGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTAT                                                        <  SRR4302540.8243393/94‑1 (MQ=60)
                                       TGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTAT                                                        <  SRR4302540.3331229/94‑1 (MQ=60)
                                        GATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATA                                                       <  SRR4302540.6235857/94‑1 (MQ=60)
                                        GATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATA                                                       <  SRR4302540.2020095/94‑1 (MQ=60)
                                        GATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATA                                                       <  SRR4302540.1671107/94‑1 (MQ=60)
                                         ATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATAC                                                      <  SRR4302540.2357315/94‑1 (MQ=60)
                                         ATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATAC                                                      <  SRR4302540.2286681/94‑1 (MQ=60)
                                         ATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATAC                                                      <  SRR4302540.7401389/94‑1 (MQ=60)
                                         ATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATAC                                                      <  SRR4302540.3496601/94‑1 (MQ=60)
                                         ATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGGTGATTACCTATAC                                                      >  SRR4302540.6416668/1‑94 (MQ=60)
                                           AACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGC                                                    <  SRR4302540.4428673/94‑1 (MQ=60)
                                           AACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGC                                                    <  SRR4302540.2348967/94‑1 (MQ=60)
                                           AACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGC                                                    >  SRR4302540.9006874/1‑94 (MQ=60)
                                            ACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCG                                                   <  SRR4302540.6897615/94‑1 (MQ=60)
                                             CATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGTGTTGGGCTTAGGTCGCCGCTTAATGGAAAAGTTGATTACCTATACGCGA                                                  >  SRR4302540.8409314/1‑94 (MQ=60)
                                              ATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAG                                                 <  SRR4302540.3042764/94‑1 (MQ=60)
                                              ATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAG                                                 >  SRR4302540.8306596/1‑94 (MQ=60)
                                              ATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAG                                                 >  SRR4302540.35901/1‑94 (MQ=60)
                                              ATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAG                                                 <  SRR4302540.5197661/94‑1 (MQ=60)
                                              ATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAG                                                 >  SRR4302540.4787003/1‑94 (MQ=60)
                                              ATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAG                                                 <  SRR4302540.2571414/94‑1 (MQ=60)
                                                CGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGAT                                               <  SRR4302540.6238224/94‑1 (MQ=60)
                                                CGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGAT                                               >  SRR4302540.126106/1‑94 (MQ=60)
                                                   TGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTCCCTATACGCGAGATCAC                                            <  SRR4302540.6542494/94‑1 (MQ=60)
                                                   TGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCAC                                            <  SRR4302540.6542495/94‑1 (MQ=60)
                                                   TGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCAC                                            <  SRR4302540.5785570/94‑1 (MQ=60)
                                                   TGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCAC                                            <  SRR4302540.6741956/94‑1 (MQ=60)
                                                   TGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCAC                                            <  SRR4302540.5400511/94‑1 (MQ=60)
                                                   TGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCAC                                            <  SRR4302540.3089442/94‑1 (MQ=60)
                                                   TGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCAC                                            <  SRR4302540.2409378/94‑1 (MQ=60)
                                                   TGCCGAATTTGCTCTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTGAACGCGAGATCAC                                            <  SRR4302540.9996681/94‑1 (MQ=60)
                                                     CCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGG                                          >  SRR4302540.9626393/1‑94 (MQ=60)
                                                     CCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGG                                          <  SRR4302540.4079275/94‑1 (MQ=60)
                                                      CGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGA                                         <  SRR4302540.5666273/94‑1 (MQ=60)
                                                      CGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGA                                         <  SRR4302540.4438881/94‑1 (MQ=60)
                                                      CGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGA                                         <  SRR4302540.1417330/94‑1 (MQ=60)
                                                      CGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTNGANNACCTATACGCGAGATCACNGA                                         >  SRR4302540.1710216/1‑94 (MQ=60)
                                                       GAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGAC                                        >  SRR4302540.5677631/1‑94 (MQ=60)
                                                       GAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGAC                                        >  SRR4302540.9488105/1‑94 (MQ=60)
                                                       GAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGAC                                        >  SRR4302540.7748044/1‑94 (MQ=60)
                                                       GAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGAC                                        <  SRR4302540.6180965/94‑1 (MQ=60)
                                                        AATTTGCTTGACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACT                                       <  SRR4302540.3521464/94‑1 (MQ=60)
                                                        AATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACT                                       <  SRR4302540.6536251/94‑1 (MQ=60)
                                                         ATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTA                                      >  SRR4302540.3913666/1‑94 (MQ=60)
                                                           TTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACA                                    <  SRR4302540.7324284/94‑1 (MQ=60)
                                                           TTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACA                                    >  SRR4302540.5874949/1‑94 (MQ=60)
                                                            TGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAA                                   <  SRR4302540.2496955/94‑1 (MQ=60)
                                                             GCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAAC                                  <  SRR4302540.7139327/94‑1 (MQ=60)
                                                             GCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAAC                                  <  SRR4302540.5618404/94‑1 (MQ=60)
                                                             GCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAAC                                  <  SRR4302540.8838960/94‑1 (MQ=60)
                                                             GCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAAC                                  <  SRR4302540.9141518/94‑1 (MQ=60)
                                                             GCTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAAC                                  <  SRR4302540.9517917/94‑1 (MQ=60)
                                                             GCTGTACTGGTTCGCTCGGATCTCAAAGGGCTGGGCTTAGGTCGCCGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACAGACTACAAC                                  >  SRR4302540.3805500/1‑94 (MQ=60)
                                                              CTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACG                                 >  SRR4302540.1988502/1‑94 (MQ=60)
                                                              CTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACG                                 >  SRR4302540.10129562/1‑94 (MQ=60)
                                                              CTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACG                                 >  SRR4302540.1007006/1‑94 (MQ=60)
                                                              CTGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACG                                 >  SRR4302540.3846471/1‑94 (MQ=60)
                                                               TGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGT                                <  SRR4302540.4863281/94‑1 (MQ=60)
                                                               TGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGT                                >  SRR4302540.5819427/1‑94 (MQ=60)
                                                               TGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGT                                >  SRR4302540.2480907/1‑94 (MQ=60)
                                                               TGTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGT                                <  SRR4302540.6642308/94‑1 (MQ=60)
                                                                GTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTC                               >  SRR4302540.5918927/1‑94 (MQ=60)
                                                                GTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTC                               <  SRR4302540.5720514/94‑1 (MQ=60)
                                                                GTACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTC                               >  SRR4302540.6733125/1‑94 (MQ=60)
                                                                 TACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCT                              <  SRR4302540.6641044/94‑1 (MQ=60)
                                                                  ACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTG                             <  SRR4302540.4038800/94‑1 (MQ=60)
                                                                  ACTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTG                             <  SRR4302540.3835500/94‑1 (MQ=60)
                                                                   CTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTCGGTCGACGCTTAATGCAAACGTTGATTACATATACGCGAGATCACGGACTACAGCGTCTag                            >  SRR4302540.2261526/1‑92 (MQ=60)
                                                                   CTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGA                            >  SRR4302540.2261525/1‑94 (MQ=60)
                                                                   CTGGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGA                            >  SRR4302540.9676180/1‑94 (MQ=60)
                                                                     GGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTTATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAAT                          <  SRR4302540.163289/94‑1 (MQ=60)
                                                                     GGTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAAT                          <  SRR4302540.163290/94‑1 (MQ=60)
                                                                      GTTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATG                         >  SRR4302540.2698445/1‑94 (MQ=60)
                                                                       TTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGG                        <  SRR4302540.5734551/94‑1 (MQ=60)
                                                                       TTCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGG                        >  SRR4302540.5474634/1‑94 (MQ=60)
                                                                        TCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGT                       <  SRR4302540.4520118/94‑1 (MQ=60)
                                                                        TCGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGT                       <  SRR4302540.9780726/94‑1 (MQ=60)
                                                                         CGCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTA                      <  SRR4302540.1986873/94‑1 (MQ=60)
                                                                          GCTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTAT                     >  SRR4302540.6295696/1‑94 (MQ=60)
                                                                          GCTCGGATCTCAAAGGGTTAGGCTTAGGTCCACGCTTAATGGACAAGTGGATTACCTATACGCGAGATCACGGACTACAACGTCGGAGTGGTAT                     >  SRR4302540.7748234/1‑94 (MQ=60)
                                                                           CTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATT                    <  SRR4302540.5360609/94‑1 (MQ=60)
                                                                           CTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATT                    >  SRR4302540.6965548/1‑94 (MQ=60)
                                                                           CTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATT                    <  SRR4302540.5360610/94‑1 (MQ=60)
                                                                           CTCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATT                    <  SRR4302540.6803151/94‑1 (MQ=60)
                                                                            TCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTA                   <  SRR4302540.790935/94‑1 (MQ=60)
                                                                            TCGGATCTCAAAGGGTTGGGCTTAGGTCGACGCCTAATGGAAAAGTTGATTACCTATACGTGAGATCACGGACTACAATGTCTGAATGGTATTA                   >  SRR4302540.9085652/1‑94 (MQ=60)
                                                                             CGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTAC                  <  SRR4302540.6534077/94‑1 (MQ=60)
                                                                             CGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTAC                  <  SRR4302540.5440323/94‑1 (MQ=60)
                                                                             CGGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTAC                  <  SRR4302540.8399708/94‑1 (MQ=60)
                                                                              GGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACG                 >  SRR4302540.3972345/1‑94 (MQ=60)
                                                                              GGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACG                 <  SRR4302540.106907/94‑1 (MQ=60)
                                                                              GGATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACG                 <  SRR4302540.106908/94‑1 (MQ=60)
                                                                                GTCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGAT               <  SRR4302540.8693181/94‑1 (MQ=60)
                                                                                ATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGAT               <  SRR4302540.7330345/94‑1 (MQ=60)
                                                                                ATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGAT               >  SRR4302540.816057/1‑94 (MQ=60)
                                                                                ATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGAT               <  SRR4302540.6030810/94‑1 (MQ=60)
                                                                                ATCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGAT               <  SRR4302540.7240282/94‑1 (MQ=60)
                                                                                 TCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATG              >  SRR4302540.9016094/1‑94 (MQ=60)
                                                                                 TCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATG              <  SRR4302540.4518704/94‑1 (MQ=60)
                                                                                 TCTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATG              >  SRR4302540.3355363/1‑94 (MQ=60)
                                                                                  CTCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGC             >  SRR4302540.165238/1‑94 (MQ=60)
                                                                                   TCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCC            >  SRR4302540.5930746/1‑94 (MQ=60)
                                                                                   TCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCC            >  SRR4302540.6177550/1‑94 (MQ=60)
                                                                                   TCAAAGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCC            >  SRR4302540.2383947/1‑94 (MQ=60)
                                                                                       AGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAAC        <  SRR4302540.9345814/94‑1 (MQ=60)
                                                                                       AGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAAC        <  SRR4302540.8290146/94‑1 (MQ=60)
                                                                                       AGGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAAC        >  SRR4302540.7581436/1‑94 (MQ=60)
                                                                                        GGGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAACA       >  SRR4302540.5721803/1‑94 (MQ=60)
                                                                                         GGTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAACAA      >  SRR4302540.9573386/1‑94 (MQ=60)
                                                                                          GTTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAACAAT     >  SRR4302540.9334765/1‑94 (MQ=60)
                                                                                           TTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAACAATC    >  SRR4302540.1687196/1‑94 (MQ=60)
                                                                                           TTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAACAATC    <  SRR4302540.221853/94‑1 (MQ=60)
                                                                                           TTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAACAATC    <  SRR4302540.8064756/94‑1 (MQ=60)
                                                                                           TTGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAACAATC    <  SRR4302540.5466091/94‑1 (MQ=60)
                                                                                            TGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAACAATCG   <  SRR4302540.9269516/94‑1 (MQ=60)
                                                                                            TGGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAACAATCG   <  SRR4302540.7886196/94‑1 (MQ=60)
                                                                                             GGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAACAATCGT  <  SRR4302540.3477274/94‑1 (MQ=60)
                                                                                             |                                                                                             
GGAAGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTAGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAACAATCGT  >  NC_000913/2720342‑2720528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑