Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,746,200	T→C	S73S (AGT→AGC)	b2611 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,746,200	0	T	C	100.0%	1105.7 / NA	335	S73S (AGT→AGC)	b2611	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (169/166); total (169/166)

Only 100 of 340 total aligned reads displayed.

GCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGTTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCAA  >  NC_000913/2746112‑2746289

gCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTtga                                                                                       <  2:9598374/93‑1 (MQ=255)

 ccACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTtgat                                                                                      <  1:3022805/93‑1 (MQ=255)

  cACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTtgatg                                                                                     >  2:3608498/1‑93 (MQ=255)

   aCGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAACACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTtgagta                                                                                    >  1:7867372/1‑90 (MQ=255)

   aCGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAACCCTCATCCTGCTGAACGTTGGTTCATTGGTCAGCTtgatga                                                                                    <  2:8804670/93‑1 (MQ=255)

   aCGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTtgatga                                                                                    >  1:4796200/1‑93 (MQ=255)

     gCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATc                                                                                  >  2:297480/1‑93 (MQ=255)

     gCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATc                                                                                  >  1:324557/1‑93 (MQ=255)

        aTCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGt                                                                               >  1:7205818/1‑93 (MQ=255)

         tCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTa                                                                              <  2:875540/93‑1 (MQ=255)

          cGCTCTGGAAGCCCGCATCCTGCCCGACGTTGATAG‑GGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACg                                                                            <  1:9235251/93‑1 (MQ=255)

           gCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACg                                                                            >  2:5653445/1‑93 (MQ=255)

            ctctGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACgg                                                                           <  1:6532542/93‑1 (MQ=255)

            ctctGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACgg                                                                           >  2:7538341/1‑93 (MQ=255)

             tctGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGt                                                                          <  2:4608995/93‑1 (MQ=255)

             tctGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGt                                                                          <  1:5746448/93‑1 (MQ=255)

             tctGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGt                                                                          <  1:2265698/93‑1 (MQ=255)

              ctGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTa                                                                         <  2:3477178/93‑1 (MQ=255)

               tGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTaa                                                                        <  1:5933674/93‑1 (MQ=255)

               tGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTaa                                                                        <  1:4463606/93‑1 (MQ=255)

               tGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTaa                                                                        <  1:3118453/93‑1 (MQ=255)

                ggAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTCAt                                                                       >  2:5527067/1‑93 (MQ=255)

                ggAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAAt                                                                       <  1:2651070/93‑1 (MQ=255)

                ggAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAAt                                                                       >  2:10034503/1‑93 (MQ=255)

                 gAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATg                                                                      <  2:2762914/93‑1 (MQ=255)

                      ccGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCAt                                                                 >  2:5935315/1‑93 (MQ=255)

                       cGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCAtt                                                                <  2:5080483/93‑1 (MQ=255)

                        gCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATtg                                                               <  1:5364432/93‑1 (MQ=255)

                        gCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATtg                                                               >  2:9429938/1‑93 (MQ=255)

                         cATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGGCAGCTTGATGATCTGTACGGTAATGACCATtgg                                                              >  2:8976894/1‑92 (MQ=255)

                          aTCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATtgtg                                                             <  1:1247207/93‑1 (MQ=255)

                           tCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTgg                                                            >  2:7263296/1‑93 (MQ=255)

                           tCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTgg                                                            >  2:9320204/1‑93 (MQ=255)

                           tCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTgg                                                            >  2:1315552/1‑93 (MQ=255)

                            ccTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGc                                                           <  1:1663296/93‑1 (MQ=255)

                             cTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCt                                                          >  2:5293321/1‑93 (MQ=255)

                             cTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCt                                                          >  1:4243018/1‑93 (MQ=255)

                             cTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCt                                                          >  2:1766931/1‑93 (MQ=255)

                              tGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCtt                                                         >  1:1283921/1‑93 (MQ=255)

                              tGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCtt                                                         >  2:3851396/1‑93 (MQ=255)

                               gCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTtc                                                        <  2:6457371/93‑1 (MQ=255)

                                 ccGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTtctc                                                      <  1:473770/93‑1 (MQ=255)

                                 ccGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTtctc                                                      <  1:8993497/93‑1 (MQ=255)

                                  cGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCg                                                     >  1:2819538/1‑93 (MQ=255)

                                  cGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCg                                                     >  1:8632650/1‑93 (MQ=255)

                                   gACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGc                                                    <  1:950406/93‑1 (MQ=255)

                                      ggTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAAt                                                 >  1:2420614/1‑93 (MQ=255)

                                       gTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATc                                                <  1:8202141/93‑1 (MQ=255)

                                       gTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATc                                                >  1:7739188/1‑93 (MQ=255)

                                       gTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATc                                                >  1:427837/1‑93 (MQ=255)

                                       gTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATc                                                >  2:6664492/1‑93 (MQ=255)

                                       gTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATc                                                >  1:4376106/1‑93 (MQ=255)

                                       gTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATc                                                <  1:8409063/93‑1 (MQ=255)

                                        tGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCg                                               <  2:2441788/93‑1 (MQ=255)

                                         gATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGt                                              <  1:5158405/93‑1 (MQ=255)

                                         gATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGt                                              <  1:8424391/93‑1 (MQ=255)

                                         gATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGt                                              <  2:2698925/93‑1 (MQ=255)

                                           tAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGtgg                                            <  2:8253164/93‑1 (MQ=255)

                                           tAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGtgg                                            <  1:800291/93‑1 (MQ=255)

                                             gCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGtggct                                          <  2:2311308/93‑1 (MQ=255)

                                              cGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGtggctg                                         >  1:5457077/1‑93 (MQ=255)

                                               ggACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGtggctgg                                        <  1:373484/93‑1 (MQ=255)

                                                gACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGtggctggc                                       >  2:6910595/1‑93 (MQ=255)

                                                gACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGtggctggc                                       <  1:1899559/93‑1 (MQ=255)

                                                   aaaaCCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGgctgc                                    >  2:5798545/1‑93 (MQ=255)

                                                   aaaaCCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGgctgc                                    <  1:9736707/93‑1 (MQ=255)

                                                   aaaaCCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGGggctggctcg                                    >  2:2142788/1‑91 (MQ=255)

                                                    aaaCCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGgctgct                                   <  1:6919707/93‑1 (MQ=255)

                                                    aaaCCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGgctgct                                   >  2:4340747/1‑93 (MQ=255)

                                                       ccTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGgctgctgct                                >  2:4457977/1‑93 (MQ=255)

                                                         tCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTAc                              >  1:619645/1‑93 (MQ=255)

                                                             ccTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCAt                          >  2:2942000/1‑93 (MQ=255)

                                                             ccTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCAt                          <  2:7496616/93‑1 (MQ=255)

                                                              ctgctgAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCact                         >  2:4262096/1‑91 (MQ=255)

                                                               tgctgAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTg                        >  1:9144838/1‑93 (MQ=255)

                                                                gctgAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGt                       <  1:2231505/93‑1 (MQ=255)

                                                                   gAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTa                    <  1:8794026/93‑1 (MQ=255)

                                                                   gAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTa                    <  1:6387874/93‑1 (MQ=255)

                                                                   gAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTa                    <  2:3259453/93‑1 (MQ=255)

                                                                    aaCGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTACTGACCACTGTGGCTTATGGCAATCGTTGTTGGTGGGTCCTCCCCATTTCCTAt                   >  1:6654758/1‑93 (MQ=255)

                                                                     aCGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATg                  >  2:7143952/1‑93 (MQ=255)

                                                                      cGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGc                 <  2:660215/93‑1 (MQ=255)

                                                                      agTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGc                 <  1:1031442/92‑1 (MQ=255)

                                                                       gTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGcc                <  1:5562968/93‑1 (MQ=255)

                                                                         tGGTTCATTGTTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCtt              <  1:4573042/93‑1 (MQ=255)

                                                                          ggTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCttt             <  1:7079880/93‑1 (MQ=255)

                                                                           gTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTg            >  2:7747374/1‑93 (MQ=255)

                                                                            ttCATTGGTCAGCTTGATGGTCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTgc           >  2:4743050/1‑93 (MQ=255)

                                                                            ttCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTgc           <  2:1034797/93‑1 (MQ=255)

                                                                            ttCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTgc           <  1:7459556/93‑1 (MQ=255)

                                                                             tCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTgcg          >  2:3675168/1‑93 (MQ=255)

                                                                             tCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTAACCATTGTCTATGCCTTTgcg          >  1:8078116/1‑93 (MQ=255)

                                                                               aTTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCt        >  1:8826121/1‑93 (MQ=255)

                                                                                ttGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCtt       >  1:5037667/1‑93 (MQ=255)

                                                                                tcggTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCtt       >  2:3418767/3‑93 (MQ=255)

                                                                                 tGGTCAGCTTTATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTa      <  2:7798359/93‑1 (MQ=255)

                                                                                   gTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATc    <  2:1424102/93‑1 (MQ=255)

                                                                                   gTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATc    <  1:3899584/93‑1 (MQ=255)

                                                                                     cAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCaa  >  1:7323721/1‑93 (MQ=255)

                                                                                     cAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGAGCTTATCac  >  2:9734215/1‑92 (MQ=255)

GCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGTTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCAA  >  NC_000913/2746112‑2746289

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GGTCTGCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGTTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCAACCTG  >  NC_000913/2746107‑2746293

GGTCTGCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGC                                                                                               >  SRR4302540.7455179/1‑94 (MQ=60)

GGTCTGCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGC                                                                                               <  SRR4302540.8802876/94‑1 (MQ=60)

 GTCTGCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCT                                                                                              >  SRR4302540.7957205/1‑94 (MQ=60)

  TCTGCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTT                                                                                             <  SRR4302540.7788668/94‑1 (MQ=60)

  TCTGCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTT                                                                                             <  SRR4302540.958100/94‑1 (MQ=60)

    TGCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGA                                                                                           >  SRR4302540.1192017/1‑94 (MQ=60)

     GCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGAT                                                                                          <  SRR4302540.5781421/94‑1 (MQ=60)

      CCACTCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATG                                                                                         <  SRR4302540.6451281/94‑1 (MQ=60)

      CCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATG                                                                                         <  SRR4302540.3056021/94‑1 (MQ=60)

      CCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATG                                                                                         <  SRR4302540.6451282/94‑1 (MQ=60)

       CACGCAATCGCTCTGGAAGCCCGCATCCTTCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGA                                                                                        <  SRR4302540.7343173/94‑1 (MQ=60)

       CACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGA                                                                                        >  SRR4302540.4847521/1‑94 (MQ=60)

       CACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGA                                                                                        >  SRR4302540.7707141/1‑94 (MQ=60)

       CACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGGTCATTGGTCAGCTTGAGGA                                                                                        >  SRR4302540.7959287/1‑94 (MQ=60)

         CGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATC                                                                                      >  SRR4302540.327808/1‑94 (MQ=60)

           CAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATATG                                                                                    >  SRR4302540.9143337/1‑94 (MQ=60)

            AATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGT                                                                                   <  SRR4302540.6882624/94‑1 (MQ=60)

            AATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGT                                                                                   <  SRR4302540.861403/94‑1 (MQ=60)

            AATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGT                                                                                   >  SRR4302540.7286150/1‑94 (MQ=60)

             ATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTA                                                                                  >  SRR4302540.142919/1‑94 (MQ=60)

             ATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTA                                                                                  <  SRR4302540.7198578/94‑1 (MQ=60)

              TCGCTCTGGAAGCCCGCATCCTGCCTGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTAC                                                                                 <  SRR4302540.9227236/94‑1 (MQ=60)

              TCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTAC                                                                                 <  SRR4302540.4320877/94‑1 (MQ=60)

              TCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTAC                                                                                 <  SRR4302540.7725784/94‑1 (MQ=60)

               CGCTCTGGAAGCCCGCATCCTGCCCGGCGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACG                                                                                <  SRR4302540.7807350/94‑1 (MQ=60)

               CGCTCTGGAAGCCCGCATCCTGCCCGACGTTGATAG‑GGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGG                                                                               <  SRR4302540.9345912/94‑1 (MQ=60)

                 CTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGT                                                                              <  SRR4302540.7448537/94‑1 (MQ=60)

                 CTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGT                                                                              >  SRR4302540.8127103/1‑94 (MQ=60)

                 CTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGT                                                                              >  SRR4302540.9735585/1‑94 (MQ=60)

                 CTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGT                                                                              <  SRR4302540.6605065/94‑1 (MQ=60)

                  TCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTA                                                                             <  SRR4302540.5809827/94‑1 (MQ=60)

                  TCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTA                                                                             <  SRR4302540.2290015/94‑1 (MQ=60)

                    TGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAAT                                                                           <  SRR4302540.5999250/94‑1 (MQ=60)

                    TGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAAT                                                                           <  SRR4302540.3152541/94‑1 (MQ=60)

                    TGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAAT                                                                           <  SRR4302540.8831495/94‑1 (MQ=60)

                    TGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAAT                                                                           <  SRR4302540.7980922/94‑1 (MQ=60)

                    TGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAAT                                                                           <  SRR4302540.4511992/94‑1 (MQ=60)

                    TGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAAT                                                                           <  SRR4302540.6677778/94‑1 (MQ=60)

                     GGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATG                                                                          <  SRR4302540.9716720/94‑1 (MQ=60)

                     GGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATG                                                                          <  SRR4302540.2679831/94‑1 (MQ=60)

                       AAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGAC                                                                        <  SRR4302540.795249/94‑1 (MQ=60)

                       AAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGAC                                                                        <  SRR4302540.4325010/94‑1 (MQ=60)

                         GCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCA                                                                      >  SRR4302540.1220075/1‑94 (MQ=60)

                          CCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCAT                                                                     >  SRR4302540.4638087/1‑94 (MQ=60)

                          CCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCAT                                                                     <  SRR4302540.5922908/94‑1 (MQ=60)

                           CCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATT                                                                    >  SRR4302540.3928548/1‑94 (MQ=60)

                           CCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATT                                                                    >  SRR4302540.3210323/1‑94 (MQ=60)

                           CCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATT                                                                    >  SRR4302540.2952590/1‑94 (MQ=60)

                            CGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTG                                                                   <  SRR4302540.3531542/94‑1 (MQ=60)

                            CGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTG                                                                   <  SRR4302540.2360186/94‑1 (MQ=60)

                            CGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTG                                                                   <  SRR4302540.4869615/94‑1 (MQ=60)

                             GCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGT                                                                  <  SRR4302540.5423361/94‑1 (MQ=60)

                             GCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGT                                                                  <  SRR4302540.5148820/94‑1 (MQ=60)

                               ATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGG                                                                <  SRR4302540.1259935/94‑1 (MQ=60)

                               ATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGG                                                                >  SRR4302540.4075314/1‑94 (MQ=60)

                               ATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGG                                                                >  SRR4302540.431572/1‑94 (MQ=60)

                               ATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGG                                                                <  SRR4302540.1259936/94‑1 (MQ=60)

                               ATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGG                                                                >  SRR4302540.6468294/1‑94 (MQ=60)

                               ATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGG                                                                >  SRR4302540.1603875/1‑94 (MQ=60)

                                 CCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCT                                                              >  SRR4302540.4289179/1‑94 (MQ=60)

                                 CCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCT                                                              >  SRR4302540.4798390/1‑94 (MQ=60)

                                 CCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCT                                                              <  SRR4302540.1681408/94‑1 (MQ=60)

                                  CTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTT                                                             >  SRR4302540.8145055/1‑94 (MQ=60)

                                  CTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTT                                                             >  SRR4302540.1297157/1‑94 (MQ=60)

                                   TGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTC                                                            <  SRR4302540.6659428/94‑1 (MQ=60)

                                    GCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCT                                                           <  SRR4302540.2444332/94‑1 (MQ=60)

                                     CCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTCTAAGGTAATGACCATTGTGGCTTCTG                                                          >  SRR4302540.2809716/1‑94 (MQ=60)

                                      CCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCG                                                         <  SRR4302540.478841/94‑1 (MQ=60)

                                      CCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCG                                                         >  SRR4302540.8732924/1‑94 (MQ=60)

                                      CCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCG                                                         >  SRR4302540.2849992/1‑94 (MQ=60)

                                      CCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCG                                                         <  SRR4302540.9101377/94‑1 (MQ=60)

                                       CGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGC                                                        >  SRR4302540.6909467/1‑94 (MQ=60)

                                       CGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGC                                                        >  SRR4302540.225343/1‑94 (MQ=60)

                                       CGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGC                                                        >  SRR4302540.2500182/1‑94 (MQ=60)

                                        GACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCA                                                       <  SRR4302540.960287/94‑1 (MQ=60)

                                        GACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCA                                                       >  SRR4302540.1515876/1‑94 (MQ=60)

                                          CGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAAT                                                     <  SRR4302540.8517313/94‑1 (MQ=60)

                                          CGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAAT                                                     >  SRR4302540.2446700/1‑94 (MQ=60)

                                          CGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAAT                                                     <  SRR4302540.5071335/94‑1 (MQ=60)

                                          CGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTCCTCGCAAT                                                     >  SRR4302540.2446701/1‑94 (MQ=60)

                                           GGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATC                                                    >  SRR4302540.7829540/1‑94 (MQ=60)

                                           GGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATC                                                    >  SRR4302540.432338/1‑94 (MQ=60)

                                           GGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATC                                                    >  SRR4302540.4423625/1‑94 (MQ=60)

                                           GGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGGACGGTAATGACCATTGTGGCTTCTCGCAATC                                                    >  SRR4302540.4112523/1‑94 (MQ=60)

                                            GTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCG                                                   >  SRR4302540.245392/1‑94 (MQ=60)

                                            GTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCG                                                   <  SRR4302540.8297455/94‑1 (MQ=60)

                                            GTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCG                                                   <  SRR4302540.8382379/94‑1 (MQ=60)

                                            GTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCG                                                   <  SRR4302540.8506664/94‑1 (MQ=60)

                                            GTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCG                                                   <  SRR4302540.8506665/94‑1 (MQ=60)

                                             TGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGT                                                  >  SRR4302540.9080977/1‑94 (MQ=60)

                                             TGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGT                                                  >  SRR4302540.3897867/1‑94 (MQ=60)

                                              GATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTG                                                 <  SRR4302540.5214447/94‑1 (MQ=60)

                                              GATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTG                                                 <  SRR4302540.8522172/94‑1 (MQ=60)

                                              GATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTG                                                 <  SRR4302540.5589758/94‑1 (MQ=60)

                                               ATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGG                                                <  SRR4302540.10106082/94‑1 (MQ=60)

                                                TAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGC                                               <  SRR4302540.808793/94‑1 (MQ=60)

                                                TAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGC                                               <  SRR4302540.9271151/94‑1 (MQ=60)

                                                TAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGC                                               >  SRR4302540.4821552/1‑94 (MQ=60)

                                                 AGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTTGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCT                                              <  SRR4302540.1894439/94‑1 (MQ=60)

                                                 AGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCT                                              <  SRR4302540.83192/94‑1 (MQ=60)

                                                  GCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTG                                             >  SRR4302540.5517141/1‑94 (MQ=60)

                                                  GCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTG                                             <  SRR4302540.9427740/94‑1 (MQ=60)

                                                   CGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGG                                            <  SRR4302540.5607597/94‑1 (MQ=60)

                                                   CGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGG                                            >  SRR4302540.7046331/1‑94 (MQ=60)

                                                    GGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGTTGGC                                           >  SRR4302540.5485843/1‑94 (MQ=60)

                                                    GGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGC                                           <  SRR4302540.377347/94‑1 (MQ=60)

                                                     GACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCT                                          <  SRR4302540.4488641/94‑1 (MQ=60)

                                                     GACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCT                                          <  SRR4302540.1920337/94‑1 (MQ=60)

                                                     GACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCT                                          <  SRR4302540.5281726/94‑1 (MQ=60)

                                                     GACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCT                                          <  SRR4302540.8708713/94‑1 (MQ=60)

                                                     GACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCT                                          <  SRR4302540.4488642/94‑1 (MQ=60)

                                                      ACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTG                                         >  SRR4302540.343200/1‑94 (MQ=60)

                                                      ACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTG                                         >  SRR4302540.343202/1‑94 (MQ=60)

                                                      ACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTG                                         <  SRR4302540.8578441/94‑1 (MQ=60)

                                                      ACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTG                                         <  SRR4302540.4431516/94‑1 (MQ=60)

                                                       CAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGC                                        >  SRR4302540.6509565/1‑94 (MQ=60)

                                                        AAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCT                                       <  SRR4302540.9273476/94‑1 (MQ=60)

                                                        AAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCT                                       <  SRR4302540.9851020/94‑1 (MQ=60)

                                                        AAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCT                                       <  SRR4302540.5132593/94‑1 (MQ=60)

                                                        AAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCT                                       >  SRR4302540.1713566/1‑94 (MQ=60)

                                                         AAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTG                                      <  SRR4302540.6996703/94‑1 (MQ=60)

                                                         AAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTG                                      >  SRR4302540.9612265/1‑94 (MQ=60)

                                                         AAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTG                                      >  SRR4302540.7884168/1‑94 (MQ=60)

                                                          AACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGC                                     >  SRR4302540.5505617/1‑94 (MQ=60)

                                                          AACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGC                                     <  SRR4302540.4389883/94‑1 (MQ=60)

                                                          AACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGC                                     <  SRR4302540.3226031/94‑1 (MQ=60)

                                                             CTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTAC                                  <  SRR4302540.5430317/94‑1 (MQ=60)

                                                             CTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTAC                                  >  SRR4302540.626243/1‑94 (MQ=60)

                                                                AGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCA                               >  SRR4302540.7387983/1‑94 (MQ=60)

                                                                 GCCTGCTGAACGTTGTTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGGTTCTCGCAATCGTGGCTGGCTGCTGCTACCCAT                              <  SRR4302540.4561298/94‑1 (MQ=60)

                                                                 GCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCAT                              <  SRR4302540.3089270/94‑1 (MQ=60)

                                                                 GCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCAT                              >  SRR4302540.6341839/1‑94 (MQ=60)

                                                                  CCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATT                             >  SRR4302540.304032/1‑94 (MQ=60)

                                                                   CTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCTTGGCTGGCTGCTGCTACACATTT                            >  SRR4302540.2284004/1‑94 (MQ=60)

                                                                   CTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTG                            >  SRR4302540.7468121/1‑94 (MQ=60)

                                                                   CTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTG                            >  SRR4302540.5983875/1‑94 (MQ=60)

                                                                   CTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTG                            >  SRR4302540.9254684/1‑94 (MQ=60)

                                                                   CTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTG                            >  SRR4302540.730920/1‑94 (MQ=60)

                                                                   CTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTG                            >  SRR4302540.10092111/1‑94 (MQ=60)

                                                                   CTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGATGCTACCCcttt                            >  SRR4302540.5983876/1‑90 (MQ=60)

                                                                    TGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGT                           >  SRR4302540.4562481/1‑94 (MQ=60)

                                                                     GCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTC                          <  SRR4302540.2255531/94‑1 (MQ=60)

                                                                     GCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTC                          >  SRR4302540.4724758/1‑94 (MQ=60)

                                                                      CTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCT                         >  SRR4302540.5740012/1‑94 (MQ=60)

                                                                       TGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTtttgaaatcgtggccgggcgctgcttcccatttgctt                        >  SRR4302540.619475/1‑57 (MQ=60)

                                                                        GAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTACTGACCACTGTGGCTTATGGCAATCGTtgttggtgggtcctccccatttcctat                       >  SRR4302540.6728358/1‑67 (MQ=52)

                                                                        GAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTAT                       <  SRR4302540.6458988/94‑1 (MQ=60)

                                                                        GAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTAT                       >  SRR4302540.4644573/1‑94 (MQ=60)

                                                                        GAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTAT                       <  SRR4302540.8895736/94‑1 (MQ=60)

                                                                         AACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATG                      <  SRR4302540.1281212/94‑1 (MQ=60)

                                                                           CGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTTCTACCCATTGTCTATGCC                    >  SRR4302540.6201202/1‑94 (MQ=60)

                                                                           CGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCC                    <  SRR4302540.8987362/94‑1 (MQ=60)

                                                                           AGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCC                    <  SRR4302540.1041925/94‑1 (MQ=60)

                                                                            GTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCT                   >  SRR4302540.7059357/1‑94 (MQ=60)

                                                                            GTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCT                   <  SRR4302540.5624226/94‑1 (MQ=60)

                                                                            GTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCGTCTCGCAATCGTGGCCGGCTGCTGCTACCCActttcttagcct                   >  SRR4302540.4028621/1‑82 (MQ=60)

                                                                             TTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGATGCTGCTACCCATTGTCTATGCCTT                  >  SRR4302540.8227085/1‑94 (MQ=60)

                                                                              TGGTTCATTGTTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTT                 <  SRR4302540.4622388/94‑1 (MQ=60)

                                                                              TGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTT                 <  SRR4302540.8088826/94‑1 (MQ=60)

                                                                              TGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTT                 <  SRR4302540.5369279/94‑1 (MQ=60)

                                                                               GGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTG                <  SRR4302540.1925307/94‑1 (MQ=60)

                                                                               GGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTG                <  SRR4302540.7158675/94‑1 (MQ=60)

                                                                                GTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGC               >  SRR4302540.2945901/1‑94 (MQ=60)

                                                                                GTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGC               >  SRR4302540.6743494/1‑94 (MQ=60)

                                                                                GTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGC               <  SRR4302540.6064599/94‑1 (MQ=60)

                                                                                 TTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCG              <  SRR4302540.7542730/94‑1 (MQ=60)

                                                                                 TTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCG              >  SRR4302540.8926051/1‑94 (MQ=60)

                                                                                 TTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTAACCATTGTCTATGCCTTTGCG              >  SRR4302540.8171865/1‑94 (MQ=60)

                                                                                  TCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGC             >  SRR4302540.8919640/1‑94 (MQ=60)

                                                                                  TCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGC             >  SRR4302540.8486360/1‑94 (MQ=60)

                                                                                   CATTTGTCAGCTTGATGATCTTTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCT            <  SRR4302540.2715195/94‑1 (MQ=60)

                                                                                   CATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCT            >  SRR4302540.8928190/1‑94 (MQ=60)

                                                                                   CATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCT            <  SRR4302540.893686/94‑1 (MQ=60)

                                                                                   CATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCT            >  SRR4302540.5197364/1‑94 (MQ=60)

                                                                                   CATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCT            >  SRR4302540.2048219/1‑94 (MQ=60)

                                                                                    ATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTT           >  SRR4302540.5092162/1‑94 (MQ=60)

                                                                                    ATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTT           >  SRR4302540.8797399/1‑94 (MQ=60)

                                                                                      TGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTAT         <  SRR4302540.3087194/94‑1 (MQ=60)

                                                                                        GTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCA       <  SRR4302540.3941898/94‑1 (MQ=60)

                                                                                        GTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCA       <  SRR4302540.8188211/94‑1 (MQ=60)

                                                                                         TCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCAA      <  SRR4302540.7223930/94‑1 (MQ=60)

                                                                                         TCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCAA      >  SRR4302540.7405512/1‑94 (MQ=60)

                                                                                          CAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCAAC     >  SRR4302540.281639/1‑94 (MQ=60)

                                                                                          CAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCAAC     <  SRR4302540.9320305/94‑1 (MQ=60)

                                                                                           AGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCAACC    <  SRR4302540.2116174/94‑1 (MQ=60)

                                                                                           AGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCAACC    <  SRR4302540.3807434/94‑1 (MQ=60)

                                                                                            GCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCAACCT   >  SRR4302540.3851200/1‑94 (MQ=60)

                                                                                            GCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCAACCT   <  SRR4302540.86225/94‑1 (MQ=60)

                                                                                            GCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCAACCT   <  SRR4302540.4851822/94‑1 (MQ=60)

                                                                                             CTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCAACCTG  >  SRR4302540.9248873/1‑94 (MQ=60)

                                                                                             CTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCAACCTG  >  SRR4302540.5385748/1‑94 (MQ=60)

GGTCTGCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGTTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCAACCTG  >  NC_000913/2746107‑2746293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`