Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,781,020 +G intergenic (‑144/+65) ypjA ← / ← b2648 putative ATP‑binding component of a transport system/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,781,0191.G99.4% 1642.7 / ‑0.5 538intergenic (‑143/+66)ypjA/b2648putative ATP‑binding component of a transport system/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (1/2);  new base G (249/285);  total (250/288)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.04e-01

Only 100 of 595 total aligned reads displayed.

GGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGA‑GCCGTTGCCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCG  >  NC_000913/2780927‑2781106
                                                                                             |                                                                                       
ggCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGCAATACGGGCGTATTCTTTTCTTTCGACAATGa                                                                                          <  2:8413640/93‑1 (MQ=255)
ggCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGa                                                                                          <  2:4293233/93‑1 (MQ=255)
ggCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGa                                                                                          <  1:8771656/93‑1 (MQ=255)
 gCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGA‑g                                                                                        <  1:3196243/93‑1 (MQ=255)
   aTTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGA‑ggc                                                                                      <  1:5569041/93‑3 (MQ=255)
   aTTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGA‑ggc                                                                                      <  1:494675/93‑3 (MQ=255)
    ttttttAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGA‑ggcc                                                                                     >  2:9826385/1‑90 (MQ=255)
    ttttttAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGA‑ggcc                                                                                     <  2:6323821/93‑4 (MQ=255)
       tttAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGtt                                                                                   <  2:8036364/93‑1 (MQ=255)
       tttAAACGCAGTGCGCTGAAGTGTGGTCGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGtt                                                                                   <  1:1056746/93‑1 (MQ=255)
        ttAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTg                                                                                  >  1:4759166/1‑93 (MQ=255)
          aaaCGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTggc                                                                                <  1:658261/93‑3 (MQ=255)
              gCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCaaaa                                                                            <  1:5402518/93‑1 (MQ=255)
              gCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTATCTTTCGACAATGAGGCCGTTGGCaaaa                                                                            >  1:8978210/1‑93 (MQ=21)
                aGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCaaaata                                                                          >  2:3837974/1‑93 (MQ=255)
                 gTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCaaaataa                                                                         >  2:8879312/1‑93 (MQ=255)
                 gTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCaaaataa                                                                         >  1:7189229/1‑93 (MQ=255)
                   gcgcTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCaaaataaaa                                                                       >  2:359299/1‑93 (MQ=255)
                    cgcTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCaaaataaaat                                                                      <  1:4243137/93‑1 (MQ=25)
                      cTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGa                                                                    >  2:1254163/1‑93 (MQ=255)
                      cTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGa                                                                    >  1:2259411/1‑93 (MQ=255)
                      cTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGa                                                                    >  1:180675/1‑93 (MQ=255)
                        gAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGAtt                                                                  >  1:5734710/1‑93 (MQ=255)
                        gAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGAtt                                                                  >  1:9622022/1‑93 (MQ=255)
                         aaGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGAttt                                                                 >  1:2044512/1‑93 (MQ=255)
                          aGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTa                                                                >  2:273365/1‑93 (MQ=255)
                          aGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTa                                                                >  2:4916231/1‑93 (MQ=255)
                          aGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTa                                                                <  1:6800053/93‑1 (MQ=37)
                           gtgtGGTTGGATAAAAAAGTAAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTAc                                                               <  1:625545/93‑1 (MQ=25)
                            tgtgGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACa                                                              <  2:2858419/93‑1 (MQ=37)
                            tgtgGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACa                                                              <  2:6885981/93‑1 (MQ=37)
                             gtgGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACAt                                                             >  2:3130851/1‑93 (MQ=255)
                              tgGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATa                                                            <  1:8636918/93‑1 (MQ=37)
                              tgGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATa                                                            <  2:9640259/93‑1 (MQ=37)
                               ggTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATaa                                                           >  2:6667808/1‑93 (MQ=255)
                               ggTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATaa                                                           <  1:4377551/93‑1 (MQ=37)
                               ggTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATaa                                                           >  2:6436146/1‑93 (MQ=255)
                                gTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAAt                                                          >  2:2249255/1‑93 (MQ=255)
                                 ttGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATc                                                         >  2:5610700/1‑93 (MQ=255)
                                 ttGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATc                                                         <  2:8712348/93‑1 (MQ=255)
                                    gATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGtt                                                      >  1:5850333/1‑93 (MQ=255)
                                    gATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGtt                                                      >  2:8296139/1‑93 (MQ=255)
                                     aTAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGttt                                                     <  1:2675602/93‑1 (MQ=255)
                                      tAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTc                                                    >  1:7977796/1‑93 (MQ=255)
                                       aaaaaaGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCt                                                   >  2:1706073/1‑93 (MQ=255)
                                        aaaaaGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtg                                                  <  1:3477166/93‑1 (MQ=37)
                                         aaaaGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtga                                                 <  1:8828709/93‑1 (MQ=37)
                                           aaGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtgatg                                               >  1:7026015/1‑93 (MQ=255)
                                           aaGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtgatg                                               >  2:9300497/1‑93 (MQ=255)
                                           aaGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtgatg                                               >  1:2944461/1‑93 (MQ=255)
                                            aGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtgatga                                              <  1:3988850/93‑1 (MQ=255)
                                             gTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGaa                                             <  2:4432035/93‑1 (MQ=37)
                                              tCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAat                                            <  2:9023484/93‑1 (MQ=37)
                                               taaTCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAata                                           <  1:5992766/92‑1 (MQ=25)
                                               cAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAata                                           <  1:8056783/93‑1 (MQ=37)
                                                  tCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAtct                                        <  2:1050642/93‑1 (MQ=25)
                                                  tCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAtct                                        <  2:2143043/93‑1 (MQ=25)
                                                   ccATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAGAATAAAATGATTTACATAATCGTTTCTGATGAATAtctt                                       >  1:4634023/1‑93 (MQ=25)
                                                    cATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAtcttc                                      <  2:7266562/93‑1 (MQ=255)
                                                     aTTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAtcttct                                     >  2:6128694/1‑93 (MQ=255)
                                                      ttCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTg                                    >  2:7014629/1‑93 (MQ=255)
                                                       tCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGc                                   <  1:3142773/93‑1 (MQ=255)
                                                         aGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTc                                 >  1:7461933/1‑93 (MQ=255)
                                                          ggAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTca                                >  2:5099713/1‑93 (MQ=255)
                                                              aTACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATa                            <  1:6470132/93‑1 (MQ=255)
                                                               tACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATaa                           >  2:9203236/1‑93 (MQ=255)
                                                                 cGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATaaaa                         <  2:3527253/93‑1 (MQ=18)
                                                                  gggCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATaaaaa                        <  1:1038751/93‑1 (MQ=255)
                                                                  gggCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATaaaaa                        <  2:7713012/93‑1 (MQ=18)
                                                                   ggCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAAt                       <  1:6701836/93‑1 (MQ=255)
                                                                   gacGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAAt                       >  2:1906983/3‑93 (MQ=18)
                                                                    gCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATc                      <  2:7139591/93‑1 (MQ=18)
                                                                     cGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATca                     <  2:292483/93‑1 (MQ=255)
                                                                      gTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATcac                    <  2:9472802/93‑1 (MQ=17)
                                                                       tATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATcaca                   >  2:259603/1‑93 (MQ=18)
                                                                       tATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATcaca                   >  2:576664/1‑93 (MQ=18)
                                                                       tATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATcaca                   >  1:7812282/1‑93 (MQ=255)
                                                                       tATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATcaca                   >  1:763689/1‑93 (MQ=255)
                                                                         ttcttttcttTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATcacaca                 >  1:9303610/1‑93 (MQ=17)
                                                                          tcttttctttCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACaa                >  1:9791855/1‑93 (MQ=14)
                                                                           cttttctttCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAt               <  2:3365119/93‑1 (MQ=255)
                                                                           cttttctttCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAt               >  1:370223/1‑93 (MQ=14)
                                                                            ttttctttCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATa              <  1:8414110/93‑1 (MQ=17)
                                                                            ttttctttCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATa              <  1:6897397/93‑1 (MQ=255)
                                                                            ttttctttCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATa              <  2:7793879/93‑1 (MQ=255)
                                                                             tttctttcGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATaa             >  1:2830032/1‑93 (MQ=17)
                                                                             tttctttcGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATaa             <  2:2498046/93‑1 (MQ=255)
                                                                             tttctttcGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATaa             <  1:326947/93‑1 (MQ=255)
                                                                             tttctttcGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATaa             <  1:1242894/93‑1 (MQ=255)
                                                                             tttctttcGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTCTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATaa             <  1:3233367/93‑1 (MQ=14)
                                                                                 tttcGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACttt         <  2:4741839/93‑1 (MQ=255)
                                                                                 tttcGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACttt         >  1:2519345/1‑93 (MQ=17)
                                                                                 tttcGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACttt         <  1:6166420/93‑1 (MQ=255)
                                                                                  ttcGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTg        <  2:745131/93‑1 (MQ=255)
                                                                                    cGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTgag      >  2:5426029/1‑93 (MQ=17)
                                                                                     gACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTgaga     <  1:5119102/93‑1 (MQ=255)
                                                                                     gACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTgaga     <  2:1496622/93‑1 (MQ=255)
                                                                                     gACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCGGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTgaga     <  1:1641022/93‑1 (MQ=17)
                                                                                      aCAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGAt    <  2:4115962/93‑1 (MQ=255)
                                                                                       cAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATc   >  1:9147687/1‑93 (MQ=18)
                                                                                             |                                                                                       
GGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGA‑GCCGTTGCCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCG  >  NC_000913/2780927‑2781106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 324 total aligned reads displayed.
GGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑GCCGTTGCCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTG  >  NC_000913/2780927‑2781113
                                                                                               |                                                                                             
GGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑G                                                                                               <  SRR4302540.6835309/94‑1 (MQ=60)
GGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑G                                                                                               >  SRR4302540.662772/1‑94 (MQ=60)
GGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑G                                                                                               <  SRR4302540.716373/94‑1 (MQ=60)
GGCATTTTTTAAACGCAGTGCGCTGAAGTGGGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTAGTCTTTTCTTTCGACAAT‑GA‑G                                                                                               >  SRR4302540.306465/1‑94 (MQ=60)
 GCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑GG                                                                                              <  SRR4302540.3230957/94‑1 (MQ=60)
 GCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑GG                                                                                              <  SRR4302540.3417074/94‑1 (MQ=60)
  CATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑GGC                                                                                             >  SRR4302540.9204569/1‑94 (MQ=60)
   ATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑Ggcc                                                                                            <  SRR4302540.5285640/94‑4 (MQ=60)
   ATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑Ggcc                                                                                            <  SRR4302540.1534521/94‑4 (MQ=60)
   ATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑Ggcc                                                                                            >  SRR4302540.7801833/1‑91 (MQ=60)
   ATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑Ggcc                                                                                            <  SRR4302540.5928472/94‑4 (MQ=60)
   ATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑Ggcc                                                                                            >  SRR4302540.8980380/1‑91 (MQ=60)
   ATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑Ggcc                                                                                            >  SRR4302540.8872745/1‑91 (MQ=60)
   ATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑Ggcc                                                                                            <  SRR4302540.5630363/94‑4 (MQ=60)
   ATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑Ggcc                                                                                            >  SRR4302540.9144549/1‑91 (MQ=60)
     TTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGT                                                                                           >  SRR4302540.9730372/1‑94 (MQ=60)
     TTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGT                                                                                           >  SRR4302540.5664978/1‑94 (MQ=60)
     TTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGT                                                                                           >  SRR4302540.292724/1‑94 (MQ=60)
      TTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTT                                                                                          <  SRR4302540.7234094/94‑1 (MQ=60)
       TTTAAACGCAGTGCGCTGAAGTGTGGTCGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTG                                                                                         <  SRR4302540.1067503/94‑1 (MQ=60)
        TTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑Ggccgttgg                                                                                       <  SRR4302540.5902101/94‑9 (MQ=60)
        TTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑Ggccgttgg                                                                                       <  SRR4302540.9251499/94‑9 (MQ=60)
        TTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑Ggccgttgg                                                                                       <  SRR4302540.8221334/94‑9 (MQ=60)
        TTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑Ggccgttgg                                                                                       >  SRR4302540.5860311/1‑86 (MQ=60)
        TTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑Ggccgttgg                                                                                       <  SRR4302540.5902099/94‑9 (MQ=60)
        TTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑Ggccgttgg                                                                                       <  SRR4302540.8139037/94‑9 (MQ=60)
         TAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGC                                                                                       >  SRR4302540.2701443/1‑94 (MQ=60)
         TAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGC                                                                                       >  SRR4302540.9745308/1‑94 (MQ=60)
         TAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGAAAAT‑GA‑Ggccgttgga                                                                                      >  SRR4302540.3239530/1‑85 (MQ=60)
          AAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAACTACGGGCGTCTCCTTTTCTTTCGACAATGGA‑GCCGTTGGCA                                                                                      >  SRR4302540.4422180/1‑94 (MQ=60)
          AAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCA                                                                                      <  SRR4302540.665287/94‑1 (MQ=60)
          AAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCA                                                                                      <  SRR4302540.5630016/94‑1 (MQ=60)
           AACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAA                                                                                     >  SRR4302540.3871371/1‑94 (MQ=60)
            ACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAA                                                                                    <  SRR4302540.7713164/94‑1 (MQ=60)
             CGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTATCTTTCGACAAT‑GAGGCCGTTGGCAAAA                                                                                   >  SRR4302540.9085122/1‑94 (MQ=60)
              GCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAAT                                                                                  <  SRR4302540.5461915/94‑1 (MQ=60)
              GCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAAT                                                                                  <  SRR4302540.8894648/94‑1 (MQ=60)
               CAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATA                                                                                 >  SRR4302540.3675828/1‑94 (MQ=60)
                AGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAA                                                                                >  SRR4302540.7269365/1‑94 (MQ=60)
                 GTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAA                                                                               >  SRR4302540.7025022/1‑94 (MQ=60)
                 GTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAA                                                                               >  SRR4302540.183587/1‑94 (MQ=60)
                 GTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAA                                                                               >  SRR4302540.1372459/1‑94 (MQ=60)
                  TGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAA                                                                              <  SRR4302540.2760606/94‑1 (MQ=60)
                  TGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAA                                                                              <  SRR4302540.9532618/94‑1 (MQ=60)
                    CGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATG                                                                            <  SRR4302540.4289302/94‑1 (MQ=60)
                     GCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGA                                                                           >  SRR4302540.4144708/1‑94 (MQ=60)
                     GCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGA                                                                           <  SRR4302540.5139036/94‑1 (MQ=60)
                     GCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGA                                                                           >  SRR4302540.2283653/1‑94 (MQ=60)
                      CTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGAT                                                                          <  SRR4302540.3667531/94‑1 (MQ=60)
                      CTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGAT                                                                          >  SRR4302540.4518531/1‑94 (MQ=60)
                      CTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGAT                                                                          <  SRR4302540.3180496/94‑1 (MQ=60)
                       ctaaggGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATT                                                                         <  SRR4302540.1060652/88‑1 (MQ=60)
                       TGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATT                                                                         <  SRR4302540.2951157/94‑1 (MQ=60)
                       TGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATT                                                                         <  SRR4302540.257478/94‑1 (MQ=60)
                        GAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTT                                                                        <  SRR4302540.7821500/94‑1 (MQ=60)
                        GAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTT                                                                        >  SRR4302540.2066534/1‑94 (MQ=60)
                         AAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTA                                                                       <  SRR4302540.256116/94‑1 (MQ=60)
                          AGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTAC                                                                      >  SRR4302540.5687604/1‑94 (MQ=60)
                          AGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTAC                                                                      <  SRR4302540.6393812/94‑1 (MQ=60)
                          AGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTAC                                                                      >  SRR4302540.6781956/1‑94 (MQ=60)
                          AGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTAC                                                                      <  SRR4302540.9321303/94‑1 (MQ=60)
                           GTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACA                                                                     >  SRR4302540.2030595/1‑94 (MQ=60)
                           GTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACA                                                                     <  SRR4302540.632201/94‑1 (MQ=60)
                           GTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACA                                                                     >  SRR4302540.6126336/1‑94 (MQ=60)
                           GTGTGGTTGGATAAAAAAGTAAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACA                                                                     <  SRR4302540.632202/94‑1 (MQ=60)
                            TGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACAT                                                                    <  SRR4302540.113166/94‑1 (MQ=60)
                            TGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACAT                                                                    <  SRR4302540.4427741/94‑1 (MQ=60)
                             GTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATA                                                                   <  SRR4302540.113224/94‑1 (MQ=60)
                             GTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATA                                                                   <  SRR4302540.1402814/94‑1 (MQ=60)
                              TGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAA                                                                  <  SRR4302540.8737241/94‑1 (MQ=60)
                              TGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAA                                                                  <  SRR4302540.5962536/94‑1 (MQ=60)
                                GTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATC                                                                <  SRR4302540.7423035/94‑1 (MQ=60)
                                GTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATC                                                                >  SRR4302540.3181390/1‑94 (MQ=60)
                                GTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATC                                                                >  SRR4302540.4815196/1‑94 (MQ=60)
                                 TTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCG                                                               <  SRR4302540.627291/94‑1 (MQ=60)
                                 TTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCG                                                               >  SRR4302540.986368/1‑94 (MQ=60)
                                 TTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCG                                                               <  SRR4302540.6888546/94‑1 (MQ=60)
                                  TGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGT                                                              >  SRR4302540.492534/1‑94 (MQ=60)
                                   GGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTT                                                             >  SRR4302540.777656/1‑94 (MQ=60)
                                   GGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTT                                                             >  SRR4302540.5915033/1‑94 (MQ=60)
                                    GATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTT                                                            <  SRR4302540.2169907/94‑1 (MQ=60)
                                     ATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTC                                                           <  SRR4302540.4370500/94‑1 (MQ=60)
                                     ATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTC                                                           >  SRR4302540.8070733/1‑94 (MQ=60)
                                     ATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTC                                                           >  SRR4302540.6959587/1‑94 (MQ=60)
                                      TAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCT                                                          <  SRR4302540.124301/94‑1 (MQ=60)
                                      TAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCT                                                          >  SRR4302540.3145069/1‑94 (MQ=60)
                                      TAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCT                                                          >  SRR4302540.3334099/1‑94 (MQ=60)
                                        AAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGA                                                        <  SRR4302540.3515026/94‑1 (MQ=60)
                                         AAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGAT                                                       <  SRR4302540.3822330/94‑1 (MQ=60)
                                         AAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGAT                                                       <  SRR4302540.4685539/94‑1 (MQ=60)
                                         AAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGAT                                                       >  SRR4302540.5543710/1‑94 (MQ=60)
                                         AAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGAT                                                       >  SRR4302540.8764667/1‑94 (MQ=60)
                                         AAAAGCCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGAT                                                       <  SRR4302540.812275/94‑1 (MQ=60)
                                           AAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGA                                                     >  SRR4302540.4829764/1‑94 (MQ=60)
                                            AGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAA                                                    >  SRR4302540.6817818/1‑94 (MQ=60)
                                            AGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAA                                                    <  SRR4302540.4031789/94‑1 (MQ=60)
                                            AGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAA                                                    >  SRR4302540.8401539/1‑94 (MQ=60)
                                             GTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAAT                                                   <  SRR4302540.4168601/94‑1 (MQ=60)
                                              tcacgCCATTCAGGAAATACGTGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATA                                                  <  SRR4302540.3400503/89‑1 (MQ=60)
                                              TCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATA                                                  <  SRR4302540.4933038/94‑1 (MQ=60)
                                               TAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAT                                                 <  SRR4302540.6059155/94‑1 (MQ=60)
                                               CAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAT                                                 <  SRR4302540.4727192/94‑1 (MQ=60)
                                               CAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAT                                                 <  SRR4302540.8150337/94‑1 (MQ=60)
                                                AATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATC                                                >  SRR4302540.2844820/1‑94 (MQ=60)
                                                 ATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCT                                               >  SRR4302540.1753174/1‑94 (MQ=60)
                                                    CATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCT                                            <  SRR4302540.477986/94‑1 (MQ=60)
                                                    CATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCT                                            >  SRR4302540.2209312/1‑94 (MQ=60)
                                                    CATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCT                                            <  SRR4302540.8876235/94‑1 (MQ=60)
                                                    CATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCT                                            >  SRR4302540.4382847/1‑94 (MQ=60)
                                                    CATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCT                                            <  SRR4302540.3369292/94‑1 (MQ=60)
                                                    CATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCT                                            >  SRR4302540.636100/1‑94 (MQ=60)
                                                     ATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTG                                           <  SRR4302540.2001847/94‑1 (MQ=60)
                                                     ATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTG                                           >  SRR4302540.6022015/1‑94 (MQ=60)
                                                      TTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGC                                          >  SRR4302540.9847599/1‑94 (MQ=60)
                                                       TCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCT                                         <  SRR4302540.3265165/94‑1 (MQ=60)
                                                       TCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCT                                         >  SRR4302540.7976170/1‑94 (MQ=60)
                                                       TCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCT                                         <  SRR4302540.851386/94‑1 (MQ=60)
                                                         AGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACCTAATCGTTTCTGATGAATATCTTCTGCTCA                                       >  SRR4302540.2975636/1‑94 (MQ=60)
                                                          GGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCAC                                      >  SRR4302540.3235514/1‑94 (MQ=60)
                                                          GGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCAC                                      >  SRR4302540.9324995/1‑94 (MQ=60)
                                                            AAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACAT                                    <  SRR4302540.968706/94‑1 (MQ=60)
                                                            AAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACAT                                    <  SRR4302540.5775127/94‑1 (MQ=60)
                                                              ATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAA                                  <  SRR4302540.6283928/94‑1 (MQ=60)
                                                              ATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAA                                  <  SRR4302540.3854083/94‑1 (MQ=60)
                                                              ATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAA                                  >  SRR4302540.8885385/1‑94 (MQ=60)
                                                               TACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAA                                 <  SRR4302540.903543/94‑1 (MQ=60)
                                                               TACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAA                                 <  SRR4302540.3736433/94‑1 (MQ=60)
                                                               AACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAA                                 <  SRR4302540.1051552/94‑1 (MQ=60)
                                                                ACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAA                                <  SRR4302540.2408681/94‑1 (MQ=60)
                                                                ACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAA                                >  SRR4302540.7910841/1‑94 (MQ=60)
                                                                  GGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAAT                              <  SRR4302540.1049313/94‑1 (MQ=60)
                                                                  GGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAAT                              <  SRR4302540.6690178/94‑1 (MQ=60)
                                                                   GGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATC                             <  SRR4302540.6775812/94‑1 (MQ=60)
                                                                    GCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCA                            >  SRR4302540.716808/1‑94 (MQ=60)
                                                                     CGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCAC                           <  SRR4302540.5010534/94‑1 (MQ=60)
                                                                     CGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCAC                           <  SRR4302540.6750516/94‑1 (MQ=60)
                                                                      GTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACA                          >  SRR4302540.771818/1‑94 (MQ=60)
                                                                      GTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACA                          >  SRR4302540.8088638/1‑94 (MQ=60)
                                                                      GTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACA                          >  SRR4302540.7903578/1‑94 (MQ=60)
                                                                      GTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACA                          >  SRR4302540.7096258/1‑94 (MQ=60)
                                                                        ATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACA                        >  SRR4302540.75914/1‑94 (MQ=56)
                                                                         TTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAA                       >  SRR4302540.9906555/1‑94 (MQ=54)
                                                                          TCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAT                      <  SRR4302540.3271110/94‑1 (MQ=52)
                                                                          TCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAT                      >  SRR4302540.6569206/1‑94 (MQ=52)
                                                                          TCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAT                      >  SRR4302540.7206832/1‑94 (MQ=52)
                                                                          TCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAT                      >  SRR4302540.3210029/1‑94 (MQ=52)
                                                                          TCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAT                      <  SRR4302540.5065883/94‑1 (MQ=52)
                                                                          TCGTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGAGGAATATCTTCTGCTCACATAAAAATCACACAAT                      <  SRR4302540.3280483/94‑1 (MQ=42)
                                                                           CTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATA                     >  SRR4302540.5256535/1‑94 (MQ=49)
                                                                           CTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATA                     <  SRR4302540.9301331/94‑1 (MQ=49)
                                                                            TTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAA                    >  SRR4302540.2239648/1‑94 (MQ=47)
                                                                            TTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAA                    <  SRR4302540.7429020/94‑1 (MQ=47)
                                                                            TTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAA                    <  SRR4302540.8511772/94‑1 (MQ=47)
                                                                            TTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAA                    >  SRR4302540.8809173/1‑94 (MQ=47)
                                                                            TTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAA                    <  SRR4302540.6973973/94‑1 (MQ=47)
                                                                            TTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAA                    >  SRR4302540.2860645/1‑94 (MQ=47)
                                                                             TTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAAC                   <  SRR4302540.8569239/94‑1 (MQ=47)
                                                                             TTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTCTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAAC                   <  SRR4302540.3268528/94‑1 (MQ=45)
                                                                              TTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACT                  <  SRR4302540.4516325/94‑1 (MQ=47)
                                                                              TTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACT                  >  SRR4302540.8674292/1‑94 (MQ=47)
                                                                              TTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACT                  <  SRR4302540.3071692/94‑1 (MQ=47)
                                                                              TTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACT                  >  SRR4302540.169576/1‑94 (MQ=47)
                                                                              TTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACT                  <  SRR4302540.7061817/94‑1 (MQ=47)
                                                                              TTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACT                  >  SRR4302540.169574/1‑94 (MQ=47)
                                                                               TCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTT                 <  SRR4302540.2519526/94‑1 (MQ=47)
                                                                                CTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTT                >  SRR4302540.2546554/1‑94 (MQ=49)
                                                                                CTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTT                >  SRR4302540.5660942/1‑94 (MQ=49)
                                                                                 TTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTG               >  SRR4302540.5797113/1‑94 (MQ=52)
                                                                                 TTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTG               <  SRR4302540.7659121/94‑1 (MQ=52)
                                                                                 TTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTG               <  SRR4302540.6235128/94‑1 (MQ=52)
                                                                                  TTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGA              >  SRR4302540.1253416/1‑94 (MQ=54)
                                                                                  TTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGA              >  SRR4302540.3287204/1‑94 (MQ=54)
                                                                                  TTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGA              <  SRR4302540.1816932/94‑1 (MQ=54)
                                                                                   TCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAG             >  SRR4302540.6572441/1‑94 (MQ=56)
                                                                                    CGAGAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATGATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGA            >  SRR4302540.2777179/1‑94 (MQ=60)
                                                                                    CGACAAT‑GAGGCCGTTGGCAAAATCAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGA            <  SRR4302540.9056737/94‑1 (MQ=56)
                                                                                    CGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGA            >  SRR4302540.10077681/1‑94 (MQ=59)
                                                                                    CGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGA            <  SRR4302540.6475034/94‑1 (MQ=59)
                                                                                    CGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGA            <  SRR4302540.6944207/94‑1 (MQ=59)
                                                                                     GACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGAT           >  SRR4302540.6754/1‑94 (MQ=60)
                                                                                     GACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGAT           <  SRR4302540.5174524/94‑1 (MQ=60)
                                                                                      ACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATC          <  SRR4302540.8879880/94‑1 (MQ=60)
                                                                                      ACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATC          <  SRR4302540.2974724/94‑1 (MQ=60)
                                                                                      ACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATC          <  SRR4302540.6233071/94‑1 (MQ=60)
                                                                                      ACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATC          >  SRR4302540.9257547/1‑94 (MQ=60)
                                                                                      ACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATC          <  SRR4302540.94876/94‑1 (MQ=60)
                                                                                       CAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCG         >  SRR4302540.4495637/1‑94 (MQ=60)
                                                                                       CAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCG         <  SRR4302540.5434797/94‑1 (MQ=60)
                                                                                        AAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGC        >  SRR4302540.2620089/1‑94 (MQ=60)
                                                                                        AAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGC        >  SRR4302540.4265405/1‑94 (MQ=60)
                                                                                        AAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGC        <  SRR4302540.7536776/94‑1 (MQ=60)
                                                                                         AT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCA       >  SRR4302540.8228550/1‑94 (MQ=60)
                                                                                         AT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCA       <  SRR4302540.958338/94‑1 (MQ=60)
                                                                                            gagGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGA     >  SRR4302540.6203474/4‑94 (MQ=60)
                                                                                             agGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGAT    >  SRR4302540.6946931/3‑94 (MQ=60)
                                                                                             agGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGAT    <  SRR4302540.1301318/92‑1 (MQ=60)
                                                                                             G‑GCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATT   >  SRR4302540.4130411/1‑94 (MQ=60)
                                                                                               GCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTG  <  SRR4302540.4661702/94‑1 (MQ=60)
                                                                                               GCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTG  <  SRR4302540.2513843/94‑1 (MQ=60)
                                                                                               GCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTG  >  SRR4302540.3887960/1‑94 (MQ=60)
                                                                                               |                                                                                             
GGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑GCCGTTGCCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTG  >  NC_000913/2780927‑2781113

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑