Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,781,027 C→G intergenic (‑151/+58) ypjA ← / ← b2648 putative ATP‑binding component of a transport system/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,781,0270CG100.0% 1780.1 / NA 576intergenic (‑151/+58)ypjA/b2648putative ATP‑binding component of a transport system/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (269/307);  total (269/307)

Only 100 of 584 total aligned reads displayed.

AACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑GCCGTTGCCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTT  >  NC_000913/2780938‑2781116
                                                                                           |                                                                                         
aaCGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAACTACGGGCGTCTCCTTTTCTTTCGACAATGGA‑GCCGTTGGCa                                                                                         >  1:4374671/1‑93 (MQ=25)
   gCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCaaaa                                                                                      >  2:7769825/1‑93 (MQ=255)
   gCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCaaaa                                                                                      <  1:8792941/93‑1 (MQ=255)
   gCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCaaaa                                                                                      >  2:7104665/1‑93 (MQ=255)
   gCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTATCTTTCGACAAT‑GAGGCCGTTGGCaaaa                                                                                      >  1:8978210/1‑93 (MQ=21)
     aGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCaaaata                                                                                    >  1:3636024/1‑93 (MQ=255)
      gTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCaaaataa                                                                                   >  2:3933065/1‑93 (MQ=255)
      gTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCaaaataa                                                                                   >  1:7189230/1‑93 (MQ=255)
      gTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCaaaataa                                                                                   >  2:8879312/1‑93 (MQ=255)
       tGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCaaaataaa                                                                                  <  1:9420647/93‑1 (MQ=25)
       tGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCaaaataaa                                                                                  >  1:2199768/1‑93 (MQ=255)
        gcgcTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCaaaataaaa                                                                                 >  2:2208668/1‑93 (MQ=255)
          gcTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATg                                                                               <  2:8060493/93‑1 (MQ=255)
          gcTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATg                                                                               <  1:5926087/93‑1 (MQ=25)
           cTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGa                                                                              >  2:8995171/1‑93 (MQ=255)
           cTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGa                                                                              >  1:180675/1‑93 (MQ=255)
            tGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGAt                                                                             >  1:4470061/1‑93 (MQ=255)
             gAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGAtt                                                                            >  2:7149162/1‑93 (MQ=255)
             gAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGAtt                                                                            >  1:5734710/1‑93 (MQ=255)
              aaGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGAttt                                                                           >  1:2044512/1‑93 (MQ=255)
                gtgtGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTAc                                                                         <  1:2510385/93‑1 (MQ=37)
                gtgtGGTTGGATAAAAAAGTAAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTAc                                                                         <  1:625545/93‑1 (MQ=25)
                 tgtgGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACa                                                                        >  1:3813120/1‑93 (MQ=255)
                 tgtgGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACa                                                                        <  2:5138779/93‑1 (MQ=37)
                  gtgGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACAt                                                                       <  1:8515202/93‑1 (MQ=37)
                   tgGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATa                                                                      <  2:9640259/93‑1 (MQ=37)
                   tgGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATa                                                                      <  2:285108/93‑1 (MQ=37)
                    ggTTGGATAAAAAAGTCAATCCATTCAGGAAATACAGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATaa                                                                     >  2:5903909/1‑93 (MQ=37)
                     gTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAAt                                                                    >  2:467632/1‑93 (MQ=255)
                      ttGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATc                                                                   >  2:5610700/1‑93 (MQ=255)
                      ttGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATc                                                                   <  2:8712348/93‑1 (MQ=255)
                      ttGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATc                                                                   >  1:3147106/1‑93 (MQ=255)
                        ggATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGt                                                                 <  1:3227697/93‑1 (MQ=37)
                        ggATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGt                                                                 >  1:487318/1‑93 (MQ=255)
                         gATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGtt                                                                >  1:5502933/1‑93 (MQ=255)
                         gATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGtt                                                                >  1:769465/1‑93 (MQ=255)
                         gATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGtt                                                                >  2:8296139/1‑93 (MQ=255)
                          aTAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGttt                                                               <  2:10008615/93‑1 (MQ=37)
                          aTAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGttt                                                               <  1:2675602/93‑1 (MQ=255)
                            aaaaaaGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCt                                                             <  1:6926100/93‑1 (MQ=38)
                              aaaaGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtga                                                           <  1:9194990/93‑1 (MQ=37)
                              aaaaGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtga                                                           <  2:4194771/93‑1 (MQ=255)
                              aaaaGCCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtga                                                           <  1:803739/93‑1 (MQ=37)
                                aaGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtgatg                                                         >  1:2944461/1‑93 (MQ=255)
                                aaGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtgatg                                                         >  2:9300497/1‑93 (MQ=255)
                                  gTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGaa                                                       >  2:6840623/1‑93 (MQ=255)
                                    cAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAata                                                     <  2:4919784/93‑1 (MQ=255)
                                     aaTCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAatat                                                    <  2:6194643/93‑1 (MQ=25)
                                      aTCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAtc                                                   >  1:467862/1‑93 (MQ=255)
                                       tCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAtct                                                  >  2:733998/1‑93 (MQ=255)
                                       tCCATGCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAtct                                                  <  2:1633872/93‑1 (MQ=25)
                                            tCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGc                                             >  1:5106987/1‑93 (MQ=255)
                                             cAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCt                                            >  1:7884119/1‑93 (MQ=255)
                                                   aTACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATa                                      >  1:6705111/1‑93 (MQ=255)
                                                    tACGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATaa                                     >  2:9203236/1‑93 (MQ=255)
                                                      cGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATaaaa                                   <  2:3628549/93‑1 (MQ=255)
                                                      cGGGCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATaaaa                                   <  2:3527253/93‑1 (MQ=18)
                                                       gggCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATaaaaa                                  <  1:1038751/93‑1 (MQ=255)
                                                       gggCGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATaaaaa                                  <  1:6616896/93‑1 (MQ=18)
                                                          cGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATca                               >  1:709188/1‑93 (MQ=255)
                                                          cGTATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATca                               <  2:292483/93‑1 (MQ=255)
                                                            tATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATcaca                             >  2:254075/1‑93 (MQ=255)
                                                            tATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATcaca                             >  2:5454793/1‑93 (MQ=255)
                                                            tATTCTTTTCTTTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATcaca                             >  1:9751037/1‑93 (MQ=17)
                                                              ttcttttcttTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATcacaca                           <  2:1182343/93‑1 (MQ=17)
                                                              ttcttttcttTCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATcacaca                           >  1:75136/1‑93 (MQ=17)
                                                               tcttttctttCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACaa                          <  1:3245156/93‑1 (MQ=17)
                                                               tcttttctttCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACaa                          <  2:9491607/93‑1 (MQ=255)
                                                                cttttctttCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAt                         <  2:1903888/93‑1 (MQ=255)
                                                                 ttttctttCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATa                        <  2:327514/93‑1 (MQ=255)
                                                                 ttttctttCGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATa                        <  2:303451/93‑1 (MQ=255)
                                                                  tttctttcGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATaa                       >  1:8708093/1‑93 (MQ=17)
                                                                  tttctttcGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATaa                       <  1:1242894/93‑1 (MQ=255)
                                                                   ttctttcGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAAc                      <  2:435781/93‑1 (MQ=255)
                                                                   ttctttcGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAAc                      <  1:3468640/93‑1 (MQ=255)
                                                                     ctttcGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACtt                    <  1:8392821/93‑1 (MQ=255)
                                                                     ctttcGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACtt                    <  2:694775/93‑1 (MQ=255)
                                                                      tttcGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACttt                   <  1:2821837/93‑1 (MQ=255)
                                                                      tttcGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACttt                   <  1:6166420/93‑1 (MQ=255)
                                                                      tttcGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACttt                   <  2:637429/93‑1 (MQ=255)
                                                                       ttcGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTg                  >  2:8453199/1‑93 (MQ=17)
                                                                       ttcGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTg                  <  2:212826/93‑1 (MQ=255)
                                                                         cGACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTgag                <  1:6868072/93‑1 (MQ=255)
                                                                          gACAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCGGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTgaga               <  1:1641022/93‑1 (MQ=17)
                                                                           aCAAT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGAt              <  2:7846549/93‑1 (MQ=255)
                                                                             aaT‑GAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCg            >  2:2724685/1‑93 (MQ=18)
                                                                                  aggCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGa        >  1:1059496/3‑93 (MQ=255)
                                                                                  aggCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGa        <  2:5715924/91‑1 (MQ=255)
                                                                                    gCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGAtt      >  1:4086338/1‑93 (MQ=255)
                                                                                      cGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGt    >  2:4773647/1‑93 (MQ=255)
                                                                                      cGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGt    >  2:2377668/1‑93 (MQ=255)
                                                                                      cGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGt    <  2:1389462/93‑1 (MQ=255)
                                                                                      cGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGt    <  1:420745/93‑1 (MQ=255)
                                                                                      cGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGt    >  2:9745632/1‑93 (MQ=255)
                                                                                       gTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGtt   <  1:5280267/93‑1 (MQ=255)
                                                                                        ttGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAACTCACACAATAACTTTGAGATCGCAGATTGttt  >  1:6044955/1‑93 (MQ=255)
                                                                                        ttGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGttt  >  2:7637397/1‑93 (MQ=255)
                                                                                        ttGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGttt  >  2:6591483/1‑93 (MQ=255)
                                                                                        ttGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGttt  <  1:6453961/93‑1 (MQ=255)
                                                                                        ttGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGttt  <  1:2374868/93‑1 (MQ=255)
                                                                                           |                                                                                         
AACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑GCCGTTGCCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTT  >  NC_000913/2780938‑2781116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 314 total aligned reads displayed.
TAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑G‑CCGTTGCCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTTACT  >  NC_000913/2780936‑2781120
                                                                                              |                                                                                             
TAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGC                                                                                              >  SRR4302540.2701443/1‑94 (MQ=60)
TAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGC                                                                                              >  SRR4302540.9745308/1‑94 (MQ=60)
 AAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAACTACGGGCGTCTCCTTTTCTTTCGACAATGGA‑G‑CCGTTGGCA                                                                                             >  SRR4302540.4422180/1‑94 (MQ=60)
 AAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCA                                                                                             <  SRR4302540.5630016/94‑1 (MQ=60)
 AAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCA                                                                                             <  SRR4302540.665287/94‑1 (MQ=60)
  AACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAA                                                                                            >  SRR4302540.3871371/1‑94 (MQ=60)
   ACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAA                                                                                           <  SRR4302540.7713164/94‑1 (MQ=60)
     GCAGTGCGCTGAAGTGTGGTTGGATAAAATAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAAT                                                                                         <  SRR4302540.9030697/94‑1 (MQ=60)
     GCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAAT                                                                                         <  SRR4302540.5461915/94‑1 (MQ=60)
      CAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATA                                                                                        >  SRR4302540.3379308/1‑94 (MQ=60)
      CAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATA                                                                                        >  SRR4302540.3675828/1‑94 (MQ=60)
       AGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAA                                                                                       >  SRR4302540.7269366/1‑94 (MQ=60)
        GTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAA                                                                                      >  SRR4302540.2223523/1‑94 (MQ=60)
        GTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAA                                                                                      >  SRR4302540.1372459/1‑94 (MQ=60)
        GTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAA                                                                                      >  SRR4302540.183587/1‑94 (MQ=60)
         TGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAA                                                                                     <  SRR4302540.6636284/94‑1 (MQ=60)
            GCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGA                                                                                  >  SRR4302540.2283653/1‑94 (MQ=60)
            GCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGA                                                                                  >  SRR4302540.4144708/1‑94 (MQ=60)
            GCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGA                                                                                  >  SRR4302540.182476/1‑94 (MQ=60)
             CTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGAT                                                                                 <  SRR4302540.3667531/94‑1 (MQ=60)
             CTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGAT                                                                                 <  SRR4302540.3180496/94‑1 (MQ=60)
              TGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATT                                                                                <  SRR4302540.2951156/94‑1 (MQ=60)
              TGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATT                                                                                >  SRR4302540.9735438/1‑94 (MQ=60)
               GAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTT                                                                               <  SRR4302540.7821500/94‑1 (MQ=60)
                AAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACACT‑TAGG‑CCGTTGGCAAAATAAAATGATTTA                                                                              >  SRR4302540.6103687/1‑94 (MQ=60)
                AAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTA                                                                              >  SRR4302540.3204155/1‑94 (MQ=60)
                AAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTA                                                                              <  SRR4302540.256116/94‑1 (MQ=60)
                AAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTA                                                                              >  SRR4302540.928902/1‑94 (MQ=60)
                 AGTGTGGTTGTATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTAC                                                                             >  SRR4302540.5914906/1‑94 (MQ=60)
                 AGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTAC                                                                             >  SRR4302540.6781956/1‑94 (MQ=60)
                 AGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTAC                                                                             <  SRR4302540.6875287/94‑1 (MQ=60)
                 AGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTAC                                                                             <  SRR4302540.6393812/94‑1 (MQ=60)
                 AGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTAC                                                                             >  SRR4302540.2154346/1‑94 (MQ=60)
                 AGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTAC                                                                             >  SRR4302540.5687604/1‑94 (MQ=60)
                  GTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACA                                                                            <  SRR4302540.2537497/94‑1 (MQ=60)
                  GTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACA                                                                            <  SRR4302540.632201/94‑1 (MQ=60)
                  GTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACA                                                                            >  SRR4302540.694473/1‑94 (MQ=60)
                  GTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACA                                                                            <  SRR4302540.4249678/94‑1 (MQ=60)
                  GTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACA                                                                            >  SRR4302540.6126336/1‑94 (MQ=60)
                  GTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACA                                                                            >  SRR4302540.2030595/1‑94 (MQ=60)
                  GTGTGGTTGGATAAAAAAGTAAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACA                                                                            <  SRR4302540.632202/94‑1 (MQ=60)
                   TGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACAT                                                                           <  SRR4302540.4427741/94‑1 (MQ=60)
                    GTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATA                                                                          <  SRR4302540.1402814/94‑1 (MQ=60)
                    GTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATA                                                                          >  SRR4302540.1061007/1‑94 (MQ=60)
                    GTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATA                                                                          <  SRR4302540.113224/94‑1 (MQ=60)
                    GTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATA                                                                          <  SRR4302540.8614163/94‑1 (MQ=60)
                    GTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATA                                                                          <  SRR4302540.7248694/94‑1 (MQ=60)
                     TGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAA                                                                         <  SRR4302540.5962536/94‑1 (MQ=60)
                     TGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAA                                                                         <  SRR4302540.8737241/94‑1 (MQ=60)
                     TGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAA                                                                         <  SRR4302540.8737243/94‑1 (MQ=60)
                      GGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAAT                                                                        >  SRR4302540.4366629/1‑94 (MQ=60)
                       GTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCTAAATAAAATGATTTACATAATC                                                                       >  SRR4302540.9624238/1‑94 (MQ=60)
                       GTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATC                                                                       <  SRR4302540.9121439/94‑1 (MQ=60)
                       GTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATC                                                                       >  SRR4302540.4815196/1‑94 (MQ=60)
                        TTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCG                                                                      <  SRR4302540.627291/94‑1 (MQ=60)
                        TTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCG                                                                      >  SRR4302540.5860932/1‑94 (MQ=60)
                        TTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCG                                                                      <  SRR4302540.2596608/94‑1 (MQ=60)
                        TTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCG                                                                      >  SRR4302540.986368/1‑94 (MQ=60)
                         TGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGT                                                                     >  SRR4302540.492534/1‑94 (MQ=60)
                          GGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTT                                                                    >  SRR4302540.5563543/1‑94 (MQ=60)
                          GGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTT                                                                    <  SRR4302540.3262793/94‑1 (MQ=60)
                          GGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTT                                                                    >  SRR4302540.783427/1‑94 (MQ=60)
                           GATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTT                                                                   <  SRR4302540.2169907/94‑1 (MQ=60)
                           GATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTT                                                                   <  SRR4302540.4386024/94‑1 (MQ=60)
                            ATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTC                                                                  <  SRR4302540.4370500/94‑1 (MQ=60)
                            ATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTC                                                                  >  SRR4302540.8070733/1‑94 (MQ=60)
                            ATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTC                                                                  <  SRR4302540.2704566/94‑1 (MQ=60)
                            ATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTC                                                                  >  SRR4302540.6959587/1‑94 (MQ=60)
                            ATAAAAAAGTCAATCCATCCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTC                                                                  <  SRR4302540.9506137/94‑1 (MQ=60)
                             TAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCT                                                                 <  SRR4302540.124301/94‑1 (MQ=60)
                             TAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCT                                                                 >  SRR4302540.2057771/1‑94 (MQ=60)
                             TAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCT                                                                 >  SRR4302540.3334099/1‑94 (MQ=60)
                              AAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTG                                                                <  SRR4302540.7003183/94‑1 (MQ=60)
                               AAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGA                                                               <  SRR4302540.3515026/94‑1 (MQ=60)
                               AAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGA                                                               >  SRR4302540.6973065/1‑94 (MQ=60)
                                ANNANNNANNCCATTCNNGNNNNANNGNCGTATTCTTTTCNTNCGACAAT‑NAGG‑NCGTNGGCAANATAAAATGATTTACATAATCGTTTCTGAT                                                              <  SRR4302540.1144721/94‑1 (MQ=36)
                                AAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGAT                                                              <  SRR4302540.4685539/94‑1 (MQ=60)
                                AAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGAT                                                              <  SRR4302540.8930806/94‑1 (MQ=60)
                                AAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGAT                                                              >  SRR4302540.8764667/1‑94 (MQ=60)
                                AAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGAT                                                              <  SRR4302540.9305281/94‑1 (MQ=60)
                                AAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGAT                                                              <  SRR4302540.3822330/94‑1 (MQ=60)
                                AAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGAT                                                              <  SRR4302540.2416229/94‑1 (MQ=60)
                                AAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGAT                                                              >  SRR4302540.306776/1‑94 (MQ=60)
                                 AAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATG                                                             >  SRR4302540.7104063/1‑94 (MQ=60)
                                   AGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAA                                                           <  SRR4302540.4031789/94‑1 (MQ=60)
                                    GTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAAT                                                          <  SRR4302540.4168601/94‑1 (MQ=60)
                                     tcacgCCATTCAGGAAATACGTGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATA                                                         <  SRR4302540.3400503/89‑1 (MQ=60)
                                     TCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATA                                                         <  SRR4302540.4933038/94‑1 (MQ=60)
                                      TAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAT                                                        <  SRR4302540.6059155/94‑1 (MQ=60)
                                      CAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAT                                                        <  SRR4302540.4727192/94‑1 (MQ=60)
                                      CAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAT                                                        <  SRR4302540.8150337/94‑1 (MQ=60)
                                       AATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATC                                                       >  SRR4302540.2844820/1‑94 (MQ=60)
                                           CATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCT                                                   <  SRR4302540.8876235/94‑1 (MQ=60)
                                           CATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCT                                                   <  SRR4302540.6722056/94‑1 (MQ=60)
                                           CATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCT                                                   <  SRR4302540.477986/94‑1 (MQ=60)
                                           CATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCT                                                   <  SRR4302540.3995283/94‑1 (MQ=60)
                                           CATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCT                                                   >  SRR4302540.636100/1‑94 (MQ=60)
                                            ATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTT                                                  >  SRR4302540.8884988/1‑94 (MQ=60)
                                            ATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTG                                                  >  SRR4302540.6022015/1‑94 (MQ=60)
                                             TTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGC                                                 >  SRR4302540.5162269/1‑94 (MQ=60)
                                             TTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGC                                                 >  SRR4302540.9847599/1‑94 (MQ=60)
                                              TCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCT                                                <  SRR4302540.851386/94‑1 (MQ=60)
                                              TCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCT                                                <  SRR4302540.3177034/94‑1 (MQ=60)
                                              TCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCT                                                <  SRR4302540.3265165/94‑1 (MQ=60)
                                               CAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTC                                               >  SRR4302540.7545140/1‑94 (MQ=60)
                                                AGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACCTAATCGTTTCTGATGAATATCTTCTGCTCA                                              >  SRR4302540.2975636/1‑94 (MQ=60)
                                                 GGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATATAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCAC                                             <  SRR4302540.7079911/94‑1 (MQ=60)
                                                 GGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCAC                                             >  SRR4302540.9324995/1‑94 (MQ=60)
                                                     ATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAA                                         >  SRR4302540.8885385/1‑94 (MQ=60)
                                                     ATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAA                                         <  SRR4302540.6542127/94‑1 (MQ=60)
                                                     ATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAA                                         <  SRR4302540.3854083/94‑1 (MQ=60)
                                                     ATACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAA                                         <  SRR4302540.6283928/94‑1 (MQ=60)
                                                      TACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAA                                        <  SRR4302540.3736433/94‑1 (MQ=60)
                                                      AACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAA                                        <  SRR4302540.1051552/94‑1 (MQ=60)
                                                       ACGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAA                                       >  SRR4302540.7910841/1‑94 (MQ=60)
                                                        CGGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAA                                      <  SRR4302540.8056948/94‑1 (MQ=60)
                                                         GGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAAT                                     >  SRR4302540.1749794/1‑94 (MQ=60)
                                                         GGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAAT                                     <  SRR4302540.484192/94‑1 (MQ=60)
                                                         GGGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAAT                                     <  SRR4302540.1049314/94‑1 (MQ=60)
                                                          GGCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATC                                    <  SRR4302540.6775812/94‑1 (MQ=60)
                                                           GCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCA                                   <  SRR4302540.8130375/94‑1 (MQ=60)
                                                           GCGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCA                                   >  SRR4302540.716808/1‑94 (MQ=60)
                                                            CGTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCAC                                  <  SRR4302540.6750516/94‑1 (MQ=60)
                                                             GTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACA                                 >  SRR4302540.771818/1‑94 (MQ=60)
                                                             GTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACA                                 >  SRR4302540.8355580/1‑94 (MQ=60)
                                                             GTATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACA                                 <  SRR4302540.2360148/94‑1 (MQ=60)
                                                             GAATTCTTTTCTTTCGACAAT‑GAGG‑CCGCTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACA                                 >  SRR4302540.8088643/1‑94 (MQ=53)
                                                              TATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACAC                                <  SRR4302540.3228462/94‑1 (MQ=59)
                                                               ATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACA                               >  SRR4302540.75914/1‑94 (MQ=56)
                                                               ATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACA                               >  SRR4302540.9414735/1‑94 (MQ=56)
                                                               ATTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACA                               <  SRR4302540.3722243/94‑1 (MQ=56)
                                                                TTCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAA                              >  SRR4302540.9906555/1‑94 (MQ=54)
                                                                 TCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGATTATCTTCTGCTCACATAAAAATCACACAAA                             >  SRR4302540.7491494/1‑94 (MQ=49)
                                                                 TCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAT                             >  SRR4302540.7206832/1‑94 (MQ=52)
                                                                 TCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAT                             <  SRR4302540.5065883/94‑1 (MQ=52)
                                                                 TCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAT                             >  SRR4302540.3210029/1‑94 (MQ=52)
                                                                 TCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAT                             <  SRR4302540.3271109/94‑1 (MQ=52)
                                                                 TCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAT                             <  SRR4302540.3280484/94‑1 (MQ=52)
                                                                 TCTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAT                             <  SRR4302540.3271110/94‑1 (MQ=52)
                                                                  CTTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATA                            >  SRR4302540.5256535/1‑94 (MQ=49)
                                                                   TTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAA                           <  SRR4302540.8511772/94‑1 (MQ=47)
                                                                   TTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAA                           <  SRR4302540.7429020/94‑1 (MQ=47)
                                                                   TTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAA                           >  SRR4302540.2239648/1‑94 (MQ=47)
                                                                   TTTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAA                           >  SRR4302540.8809173/1‑94 (MQ=47)
                                                                    TTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAAC                          <  SRR4302540.330223/94‑1 (MQ=47)
                                                                    TTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAAC                          <  SRR4302540.1255573/94‑1 (MQ=47)
                                                                    TTTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAAC                          <  SRR4302540.8569239/94‑1 (MQ=47)
                                                                     TTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACT                         <  SRR4302540.7061817/94‑1 (MQ=47)
                                                                     TTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACT                         >  SRR4302540.169574/1‑94 (MQ=47)
                                                                     TTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACT                         <  SRR4302540.4516325/94‑1 (MQ=47)
                                                                     TTCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACT                         <  SRR4302540.3071692/94‑1 (MQ=47)
                                                                      TCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTT                        <  SRR4302540.2519526/94‑1 (MQ=47)
                                                                      TCTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTT                        <  SRR4302540.2564384/94‑1 (MQ=47)
                                                                       CTTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTT                       <  SRR4302540.8490221/94‑1 (MQ=49)
                                                                       CTTTCGACAAT‑GA‑GCCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTT                       >  SRR4302540.7918149/1‑94 (MQ=60)
                                                                        TTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTG                      <  SRR4302540.6235128/94‑1 (MQ=52)
                                                                        TTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTG                      <  SRR4302540.2852318/94‑1 (MQ=52)
                                                                        TTTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTG                      >  SRR4302540.5797113/1‑94 (MQ=52)
                                                                         TTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGA                     <  SRR4302540.1816932/94‑1 (MQ=54)
                                                                         TTCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGA                     >  SRR4302540.57366/1‑94 (MQ=54)
                                                                          TCGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAG                    >  SRR4302540.6572441/1‑94 (MQ=56)
                                                                           CGAGAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATGATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGA                   >  SRR4302540.2777179/1‑94 (MQ=60)
                                                                           CGACAAT‑GAGG‑CCGTTGGCAAAATCAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGA                   <  SRR4302540.9056737/94‑1 (MQ=56)
                                                                           CGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGCGA                   >  SRR4302540.2777178/1‑94 (MQ=50)
                                                                           CGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGA                   >  SRR4302540.10077681/1‑94 (MQ=59)
                                                                           CGACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGA                   <  SRR4302540.6944207/94‑1 (MQ=59)
                                                                            GACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGAT                  >  SRR4302540.199792/1‑94 (MQ=60)
                                                                            GACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGAT                  <  SRR4302540.5174524/94‑1 (MQ=60)
                                                                            GACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCGGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGAT                  <  SRR4302540.1658958/94‑1 (MQ=58)
                                                                             ACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATC                 >  SRR4302540.6768542/1‑94 (MQ=60)
                                                                             ACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATC                 <  SRR4302540.2974724/94‑1 (MQ=60)
                                                                             ACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATC                 <  SRR4302540.6233071/94‑1 (MQ=60)
                                                                             ACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATC                 >  SRR4302540.9257547/1‑94 (MQ=60)
                                                                             ACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATC                 <  SRR4302540.9064907/94‑1 (MQ=60)
                                                                             ACAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATC                 <  SRR4302540.5052586/94‑1 (MQ=60)
                                                                              CAAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCG                >  SRR4302540.4495637/1‑94 (MQ=60)
                                                                               AAT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGC               >  SRR4302540.4265405/1‑94 (MQ=60)
                                                                                AT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCA              <  SRR4302540.958338/94‑1 (MQ=60)
                                                                                AT‑GAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCA              >  SRR4302540.8228550/1‑94 (MQ=60)
                                                                                   gagG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGA            >  SRR4302540.1070280/4‑94 (MQ=60)
                                                                                   gagG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGA            >  SRR4302540.6203474/4‑94 (MQ=60)
                                                                                    agG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGAT           <  SRR4302540.1301318/92‑1 (MQ=60)
                                                                                    G‑G‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATT          >  SRR4302540.4130411/1‑94 (MQ=60)
                                                                                     agcCCGTTGGCAAAATAAAATTATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGAT           <  SRR4302540.2184614/91‑1 (MQ=60)
                                                                                      G‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTG         <  SRR4302540.4661702/94‑1 (MQ=60)
                                                                                        CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGT        <  SRR4302540.3515266/94‑1 (MQ=60)
                                                                                        CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGT        >  SRR4302540.2498322/1‑94 (MQ=60)
                                                                                         CGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTT       >  SRR4302540.7754656/1‑94 (MQ=60)
                                                                                         CGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTT       <  SRR4302540.5499839/94‑1 (MQ=60)
                                                                                          GTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAACTCACACAATAACTTTGAGATCGCAGATTGTTT      >  SRR4302540.6112103/1‑94 (MQ=60)
                                                                                          GTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTT      <  SRR4302540.4606175/94‑1 (MQ=60)
                                                                                          GTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTT      >  SRR4302540.6871037/1‑94 (MQ=60)
                                                                                          GTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTT      <  SRR4302540.5337939/94‑1 (MQ=60)
                                                                                          GTTGGCAAAATAAAATGATTGACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATATCTTTGAGATCGCAGATTGTTT      <  SRR4302540.5337629/94‑1 (MQ=60)
                                                                                           TTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTT     <  SRR4302540.2400457/94‑1 (MQ=60)
                                                                                           TTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTT     <  SRR4302540.6525802/94‑1 (MQ=60)
                                                                                           TTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTT     <  SRR4302540.3532335/94‑1 (MQ=60)
                                                                                           TTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTT     <  SRR4302540.5935160/94‑1 (MQ=60)
                                                                                             GGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTTAC   >  SRR4302540.9313185/1‑94 (MQ=60)
                                                                                             GGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTTAC   >  SRR4302540.10046514/1‑94 (MQ=60)
                                                                                              |                                                                                             
TAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAAT‑GA‑G‑CCGTTGCCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTTACT  >  NC_000913/2780936‑2781120

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑