Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,840,573 T→C intergenic (+136/+23) ascB → / ← hycI 6‑phospho‑beta‑glucosidase/HycI

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,840,5730TC100.0% 1316.2 / NA 404intergenic (+136/+23)ascB/hycI6‑phospho‑beta‑glucosidase/HycI
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (177/227);  total (177/227)

Only 100 of 415 total aligned reads displayed.

CGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCTGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGATAA  >  NC_000913/2840484‑2840662
                                                                                         |                                                                                         
 gCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTcc                                                                                       <  1:8530200/93‑1 (MQ=255)
 gCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTcc                                                                                       <  1:999205/93‑1 (MQ=255)
    cGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGa                                                                                    <  2:8439696/93‑1 (MQ=255)
    cGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGa                                                                                    <  1:3616966/93‑1 (MQ=255)
    cGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGa                                                                                    >  2:645474/1‑93 (MQ=255)
      aaCCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGAtt                                                                                  <  1:5321917/93‑1 (MQ=255)
       aCCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTc                                                                                 >  2:8677435/1‑93 (MQ=255)
       aCCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTc                                                                                 >  2:2463988/1‑93 (MQ=255)
        ccATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTcc                                                                                >  1:7965205/1‑93 (MQ=255)
        ccATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTcc                                                                                >  2:1575814/1‑93 (MQ=255)
           tGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTa                                                                             >  2:4761891/1‑93 (MQ=255)
           tGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTa                                                                             <  2:2323451/93‑1 (MQ=255)
            gAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTaa                                                                            >  2:7973825/1‑93 (MQ=255)
            gAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTaa                                                                            >  1:1751483/1‑93 (MQ=255)
            gAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTaa                                                                            <  1:4378861/93‑1 (MQ=255)
             aaGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAAt                                                                           <  1:9647494/93‑1 (MQ=255)
             aaGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAAt                                                                           >  2:6108891/1‑93 (MQ=255)
             aaGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAAt                                                                           >  1:3477425/1‑93 (MQ=255)
             aaGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAAt                                                                           >  2:6740502/1‑93 (MQ=255)
              aGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATg                                                                          >  1:3000350/1‑93 (MQ=255)
              aGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATg                                                                          >  2:1173648/1‑93 (MQ=255)
               ggCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGa                                                                         <  2:7579237/93‑1 (MQ=255)
                gCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGaa                                                                        <  2:928077/93‑1 (MQ=255)
                 cacGATAAACGCAGCGCATCGGTCAAGTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGaaa                                                                       <  1:8362336/91‑1 (MQ=255)
                  ccGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGaaaa                                                                      <  2:3351797/93‑1 (MQ=255)
                  ccGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGaaaa                                                                      <  1:3106025/93‑1 (MQ=255)
                   cGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGaaaaa                                                                     <  1:8909707/93‑1 (MQ=255)
                   cGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGaaaaa                                                                     <  1:5782303/93‑1 (MQ=255)
                   cGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGaaaaa                                                                     <  1:5637678/93‑1 (MQ=255)
                    gATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGACAAac                                                                    >  1:7446603/1‑93 (MQ=255)
                    gATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAac                                                                    <  2:6564556/93‑1 (MQ=255)
                     aTAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAact                                                                   >  2:1678464/1‑93 (MQ=255)
                      tAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAactc                                                                  >  1:7804047/1‑92 (MQ=255)
                      tAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAacta                                                                  <  2:5852404/93‑1 (MQ=255)
                      tAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAacta                                                                  <  1:9334283/93‑1 (MQ=255)
                       aaGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAactac                                                                 <  1:6629762/93‑1 (MQ=255)
                        agcgcagcgcATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAactact                                                                <  2:2030543/93‑1 (MQ=255)
                         gcgcagcgcaTCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTActc                                                               <  2:4216880/93‑1 (MQ=255)
                         gcgcagcgcaTCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTActc                                                               <  2:5187496/93‑1 (MQ=255)
                         gcgcagcgcaTCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTActc                                                               <  1:3194221/93‑1 (MQ=255)
                          cgcagcgcaTCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAACCTActct                                                              <  1:28795/93‑1 (MQ=255)
                           ccagcgcagcgGTCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACtctt                                                             <  1:5964771/92‑1 (MQ=255)
                            cagcgcaTCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACtcttc                                                            <  2:8103821/93‑1 (MQ=255)
                            cagcgcaTCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACtcttc                                                            >  2:5430844/1‑93 (MQ=255)
                             agcgcaTCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACtcttct                                                           <  2:8234731/93‑1 (MQ=255)
                             agcgcaTCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACtcttct                                                           <  2:7929718/93‑1 (MQ=255)
                              gcgcaTCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTcttctt                                                          >  1:3263144/1‑93 (MQ=255)
                               cgcaTCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCttcttc                                                         <  1:4952665/93‑1 (MQ=255)
                                 caTCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCa                                                       <  2:1257577/93‑1 (MQ=255)
                                 caTCGGGCAATTGAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCa                                                       <  1:2363147/93‑1 (MQ=255)
                                  aTCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCAc                                                      >  1:7723196/1‑93 (MQ=255)
                                  aTCGGGAAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTTCTCTTCTTCCAc                                                      <  1:2672177/93‑1 (MQ=255)
                                   tCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCAcc                                                     >  1:2757114/1‑93 (MQ=255)
                                     gggCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGc                                                   <  2:2907586/93‑1 (MQ=255)
                                      ggCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCt                                                  >  1:6813608/1‑93 (MQ=255)
                                       gCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTa                                                 >  2:4616240/1‑93 (MQ=255)
                                       gCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTa                                                 >  2:9960354/1‑93 (MQ=255)
                                       gCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTa                                                 <  1:9813653/93‑1 (MQ=255)
                                        cAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTaa                                                <  2:965860/93‑1 (MQ=255)
                                        cAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTaa                                                <  2:7848987/93‑1 (MQ=255)
                                        cAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTaa                                                <  1:5378768/93‑1 (MQ=255)
                                        cAATTTAGATTATGGCATCAGAGCTGATTCACCCCATCAAGCACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTaa                                                <  2:8970263/93‑1 (MQ=255)
                                           tttAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTg                                             >  1:6536195/1‑93 (MQ=255)
                                              aGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTgcgc                                          <  2:5643236/93‑1 (MQ=255)
                                                cATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGa                                        <  1:9153347/93‑1 (MQ=255)
                                                cATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGa                                        <  1:1372141/93‑1 (MQ=255)
                                                 atctGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGaa                                       >  1:7169862/4‑93 (MQ=255)
                                                 aTTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGaa                                       >  1:6129145/1‑93 (MQ=255)
                                                 aTTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGaa                                       <  1:3738983/93‑1 (MQ=255)
                                                     ggCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAgccg                                   <  1:7067525/93‑1 (MQ=255)
                                                         tCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCAt                               >  2:2655351/1‑93 (MQ=255)
                                                         tCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCAt                               >  1:8735371/1‑93 (MQ=255)
                                                          cAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCAtt                              <  2:395659/93‑1 (MQ=255)
                                                            gagCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATttc                            <  1:8091319/93‑1 (MQ=255)
                                                            gagCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATttc                            <  1:4071162/93‑1 (MQ=255)
                                                              gCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATttcct                          >  2:32350/1‑93 (MQ=255)
                                                               cTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCACAATttcctt                         >  2:4849912/1‑93 (MQ=255)
                                                                  gTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTccc                      <  2:4483477/93‑1 (MQ=255)
                                                                  gTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTccc                      <  1:4575017/93‑1 (MQ=255)
                                                                   ttCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTcccg                     >  2:3070667/1‑92 (MQ=255)
                                                                      aCCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGcc                  <  1:199943/93‑1 (MQ=255)
                                                                        cccATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCtt                >  1:1060696/1‑93 (MQ=255)
                                                                         ccATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTc               >  2:7481751/1‑93 (MQ=255)
                                                                          cATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTcc              <  1:1446359/93‑1 (MQ=255)
                                                                           aTCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTACa             >  1:386100/1‑93 (MQ=255)
                                                                            tCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAg            <  2:7276535/93‑1 (MQ=255)
                                                                            tCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAg            >  2:3401372/1‑93 (MQ=255)
                                                                            tCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAg            <  2:1783934/93‑1 (MQ=255)
                                                                            tCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAg            >  1:1177010/1‑93 (MQ=255)
                                                                            tCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAg            >  2:3501522/1‑93 (MQ=255)
                                                                            tCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAg            >  2:9104153/1‑93 (MQ=255)
                                                                              aaGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTc          <  2:7693764/93‑1 (MQ=255)
                                                                                gAACATCCCCGTCCTGATTCCTTAATGAAAACCTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGt        <  1:1576459/93‑1 (MQ=255)
                                                                                gAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGt        <  1:5067566/93‑1 (MQ=255)
                                                                                 aaCATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGtt       <  2:2835002/93‑1 (MQ=255)
                                                                                 aaCATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCCAATTGCTCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGtt       <  2:5022238/93‑1 (MQ=255)
                                                                                 aaCAGCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCCCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGtt       <  2:7023696/93‑1 (MQ=255)
                                                                                   cATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGa     <  1:6263601/93‑1 (MQ=255)
                                                                                     tCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGATGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGATa   >  1:2241997/1‑93 (MQ=255)
                                                                                     cccccGTCCTGATTCCTTAATGAAAAACTTCTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGATa   <  2:3842929/92‑1 (MQ=255)
                                                                                         |                                                                                         
CGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCTGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGATAA  >  NC_000913/2840484‑2840662

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 217 total aligned reads displayed.
ATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCTGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGATAAACG  >  NC_000913/2840480‑2840665
                                                                                             |                                                                                            
ATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCC                                                                                              <  SRR4302540.6750491/94‑1 (MQ=60)
 TGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCG                                                                                             <  SRR4302540.3646334/94‑1 (MQ=60)
  GTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGT                                                                                            <  SRR4302540.8462139/94‑1 (MQ=60)
    CGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCC                                                                                          <  SRR4302540.4165968/94‑1 (MQ=60)
     GCACGGACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCT                                                                                         >  SRR4302540.291493/1‑94 (MQ=60)
     GCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCT                                                                                         <  SRR4302540.1009359/94‑1 (MQ=60)
     GCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCT                                                                                         <  SRR4302540.2925234/94‑1 (MQ=60)
     GCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCT                                                                                         <  SRR4302540.6277879/94‑1 (MQ=60)
     GCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCT                                                                                         <  SRR4302540.8629312/94‑1 (MQ=60)
      CACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTG                                                                                        >  SRR4302540.1455279/1‑94 (MQ=60)
      CACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTG                                                                                        <  SRR4302540.8753575/94‑1 (MQ=60)
       ACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGA                                                                                       <  SRR4302540.3237891/94‑1 (MQ=60)
        CGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGAT                                                                                      <  SRR4302540.914577/94‑1 (MQ=60)
        CGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGAT                                                                                      <  SRR4302540.3656523/94‑1 (MQ=60)
        CGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGAT                                                                                      <  SRR4302540.7049852/94‑1 (MQ=60)
          AACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTC                                                                                    <  SRR4302540.5380191/94‑1 (MQ=60)
          AACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTC                                                                                    <  SRR4302540.6214368/94‑1 (MQ=60)
          AACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTC                                                                                    >  SRR4302540.8166212/1‑94 (MQ=60)
          AACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTC                                                                                    >  SRR4302540.8166208/1‑94 (MQ=60)
           ACGATAAAGGCCCGATAAGCGCGGCGCATCGCGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCC                                                                                   <  SRR4302540.2071286/94‑1 (MQ=60)
           ACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCC                                                                                   <  SRR4302540.322365/94‑1 (MQ=60)
           ACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCC                                                                                   <  SRR4302540.322366/94‑1 (MQ=60)
           ACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCC                                                                                   >  SRR4302540.8058034/1‑94 (MQ=60)
           ACCATGAAGGCCCGAAAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCC                                                                                   <  SRR4302540.7247238/94‑1 (MQ=60)
             CATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTT                                                                                 <  SRR4302540.3467302/94‑1 (MQ=60)
             CATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTT                                                                                 <  SRR4302540.1733655/94‑1 (MQ=60)
             CATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTT                                                                                 >  SRR4302540.283827/1‑94 (MQ=60)
               TGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAA                                                                               <  SRR4302540.5745320/94‑1 (MQ=60)
               TGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAA                                                                               >  SRR4302540.1770458/1‑94 (MQ=60)
                GAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAAT                                                                              >  SRR4302540.3515289/1‑94 (MQ=60)
                GAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAAT                                                                              <  SRR4302540.5849696/94‑1 (MQ=60)
                GAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAAT                                                                              <  SRR4302540.4426408/94‑1 (MQ=60)
                 AAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATG                                                                             >  SRR4302540.3033402/1‑94 (MQ=60)
                 AAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATG                                                                             <  SRR4302540.354398/94‑1 (MQ=60)
                 AAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATG                                                                             <  SRR4302540.9761106/94‑1 (MQ=60)
                  AGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGA                                                                            <  SRR4302540.35226/94‑1 (MQ=60)
                   GGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAA                                                                           <  SRR4302540.6034148/94‑1 (MQ=60)
                   GGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAA                                                                           <  SRR4302540.6034149/94‑1 (MQ=60)
                    GCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAA                                                                          <  SRR4302540.5132136/94‑1 (MQ=60)
                     CCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAA                                                                         <  SRR4302540.8461124/94‑1 (MQ=60)
                     CCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAA                                                                         <  SRR4302540.4052881/94‑1 (MQ=60)
                     CACGATAAACGCAGCGCATCGGTCAAGTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAA                                                                         <  SRR4302540.8459377/94‑1 (MQ=60)
                      CCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAA                                                                        <  SRR4302540.4040452/94‑1 (MQ=60)
                      CCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAA                                                                        <  SRR4302540.5026901/94‑1 (MQ=60)
                      CCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAA                                                                        <  SRR4302540.9698308/94‑1 (MQ=60)
                      CCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAA                                                                        <  SRR4302540.3140025/94‑1 (MQ=60)
                       CGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGACAAAC                                                                       >  SRR4302540.7529574/1‑94 (MQ=60)
                       CGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAAC                                                                       <  SRR4302540.5699727/94‑1 (MQ=60)
                       CGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAAC                                                                       >  SRR4302540.5047263/1‑94 (MQ=60)
                       CGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAAC                                                                       >  SRR4302540.3114590/1‑94 (MQ=60)
                       CGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAAC                                                                       >  SRR4302540.3841794/1‑94 (MQ=60)
                       CGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAAC                                                                       <  SRR4302540.9012878/94‑1 (MQ=60)
                       CGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAAC                                                                       >  SRR4302540.2747681/1‑94 (MQ=60)
                       CGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAAC                                                                       <  SRR4302540.7348441/94‑1 (MQ=60)
                       CGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAAC                                                                       <  SRR4302540.5846180/94‑1 (MQ=60)
                        GATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACT                                                                      >  SRR4302540.890870/1‑94 (MQ=60)
                        GATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACT                                                                      <  SRR4302540.8007211/94‑1 (MQ=60)
                        GATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACT                                                                      >  SRR4302540.6624474/1‑94 (MQ=60)
                         ATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTC                                                                     >  SRR4302540.7895250/1‑94 (MQ=60)
                         ATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTA                                                                     >  SRR4302540.7895249/1‑94 (MQ=60)
                          TAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTAC                                                                    <  SRR4302540.9445565/94‑1 (MQ=60)
                           AAGTGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACT                                                                   >  SRR4302540.112701/1‑94 (MQ=60)
                           AAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACT                                                                   <  SRR4302540.7252042/94‑1 (MQ=60)
                           AAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACT                                                                   <  SRR4302540.6703152/94‑1 (MQ=60)
                           AAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACT                                                                   <  SRR4302540.5868498/94‑1 (MQ=60)
                            AGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTC                                                                  >  SRR4302540.9647468/1‑94 (MQ=60)
                            AGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTC                                                                  >  SRR4302540.1214378/1‑94 (MQ=60)
                             GCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCT                                                                 <  SRR4302540.3228910/94‑1 (MQ=60)
                              CGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCTCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTT                                                                >  SRR4302540.9164879/1‑94 (MQ=60)
                              CGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAACCTACTCTT                                                                <  SRR4302540.29101/94‑1 (MQ=60)
                               ncnnnncntnngnCANTTTANNANTNNGCATCAGNGCTGGTTCACCCCATCAAGAACNTCCCCNTCCTGNTTCCTTAATGAAAAACTACTCTTC                                                               <  SRR4302540.9200009/81‑1 (MQ=60)
                               GCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTC                                                               <  SRR4302540.5164846/94‑1 (MQ=60)
                               GCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTC                                                               >  SRR4302540.9363690/1‑94 (MQ=60)
                               GCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTC                                                               >  SRR4302540.5384684/1‑94 (MQ=60)
                               GCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTC                                                               >  SRR4302540.208952/1‑94 (MQ=60)
                               CCAGCGCAGCGGTCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTC                                                               <  SRR4302540.6030771/94‑1 (MQ=60)
                                CAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCT                                                              <  SRR4302540.7045702/94‑1 (MQ=60)
                                CAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCT                                                              <  SRR4302540.3095046/94‑1 (MQ=60)
                                 AGCGCATCGTGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTT                                                             <  SRR4302540.2901326/94‑1 (MQ=60)
                                 AGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTT                                                             >  SRR4302540.3298749/1‑94 (MQ=60)
                                 AGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTT                                                             <  SRR4302540.2474891/94‑1 (MQ=60)
                                 AGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTT                                                             <  SRR4302540.3812760/94‑1 (MQ=60)
                                   CGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCC                                                           <  SRR4302540.3418410/94‑1 (MQ=60)
                                   CGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCC                                                           <  SRR4302540.5006172/94‑1 (MQ=60)
                                    GCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCA                                                          <  SRR4302540.3450792/94‑1 (MQ=60)
                                     CATCGTGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCAC                                                         <  SRR4302540.3768261/94‑1 (MQ=60)
                                     CATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCAC                                                         >  SRR4302540.7813048/1‑94 (MQ=60)
                                     CATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCAC                                                         <  SRR4302540.7947881/94‑1 (MQ=60)
                                     CATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCAC                                                         >  SRR4302540.5796495/1‑94 (MQ=60)
                                     CATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCAC                                                         >  SRR4302540.7813049/1‑94 (MQ=60)
                                     CATCGGGCAATTGAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCAC                                                         <  SRR4302540.2388597/94‑1 (MQ=60)
                                     CAGCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCAC                                                         <  SRR4302540.99558/94‑1 (MQ=60)
                                      ATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTGTTCCACC                                                        >  SRR4302540.2786907/1‑94 (MQ=60)
                                      ATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACC                                                        >  SRR4302540.2786908/1‑94 (MQ=60)
                                      ATCGGGAAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTTCTCTTCTTCCACC                                                        <  SRR4302540.2701117/94‑1 (MQ=60)
                                       TCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCG                                                       >  SRR4302540.5499430/1‑94 (MQ=60)
                                       TCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCG                                                       <  SRR4302540.5667246/94‑1 (MQ=60)
                                        CGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGC                                                      >  SRR4302540.83027/1‑94 (MQ=60)
                                         GGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCT                                                     <  SRR4302540.5881336/94‑1 (MQ=60)
                                         GGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCT                                                     >  SRR4302540.6889013/1‑94 (MQ=60)
                                           GCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAA                                                   <  SRR4302540.9928499/94‑1 (MQ=60)
                                           GCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAA                                                   >  SRR4302540.7994680/1‑94 (MQ=60)
                                           GCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAAACACTCTTCTTCCACCGCTAA                                                   >  SRR4302540.9897730/1‑94 (MQ=60)
                                            CAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTTATGAAAAACTACTCTTCTTCCACCGCTAAC                                                  >  SRR4302540.7255241/1‑94 (MQ=60)
                                            CAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAAC                                                  >  SRR4302540.2764732/1‑94 (MQ=60)
                                            CAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAAC                                                  <  SRR4302540.4120234/94‑1 (MQ=60)
                                            CAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAAC                                                  <  SRR4302540.9860555/94‑1 (MQ=60)
                                            CAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAAC                                                  <  SRR4302540.5437920/94‑1 (MQ=60)
                                              ATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTG                                                >  SRR4302540.6608737/1‑94 (MQ=60)
                                              ATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTG                                                <  SRR4302540.3988766/94‑1 (MQ=60)
                                              ATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTG                                                <  SRR4302540.7757466/94‑1 (MQ=60)
                                              ATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTG                                                <  SRR4302540.7757467/94‑1 (MQ=60)
                                              ATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTG                                                >  SRR4302540.4520983/1‑94 (MQ=60)
                                              ATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTG                                                >  SRR4302540.1934060/1‑94 (MQ=60)
                                              ATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTG                                                <  SRR4302540.8280446/94‑1 (MQ=60)
                                               TTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGC                                               <  SRR4302540.1186416/94‑1 (MQ=60)
                                               TTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGC                                               <  SRR4302540.641771/94‑1 (MQ=60)
                                                TTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCG                                              >  SRR4302540.5332151/1‑94 (MQ=60)
                                                   GCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGA                                           >  SRR4302540.3526597/1‑94 (MQ=60)
                                                    CATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAA                                          >  SRR4302540.6197413/1‑94 (MQ=60)
                                                    CATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAA                                          <  SRR4302540.9263246/94‑1 (MQ=60)
                                                    CATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAA                                          <  SRR4302540.1386682/94‑1 (MQ=60)
                                                    CATCTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAA                                          >  SRR4302540.7249784/1‑94 (MQ=60)
                                                     ATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAG                                         <  SRR4302540.9250626/94‑1 (MQ=60)
                                                     ATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAG                                         <  SRR4302540.3779777/94‑1 (MQ=60)
                                                       TTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCC                                       <  SRR4302540.8894253/94‑1 (MQ=60)
                                                       TTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCC                                       <  SRR4302540.10072230/94‑1 (MQ=60)
                                                         GGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGC                                     <  SRR4302540.7146135/94‑1 (MQ=60)
                                                         GGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGC                                     >  SRR4302540.6799957/1‑94 (MQ=60)
                                                            ATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCCCCGCTAACTGCGCGAAGCCGCCAT                                  <  SRR4302540.1257898/94‑1 (MQ=60)
                                                            ATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCAT                                  >  SRR4302540.9428724/1‑94 (MQ=60)
                                                            ATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCAT                                  >  SRR4302540.8825362/1‑94 (MQ=60)
                                                            ATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCAT                                  <  SRR4302540.7987342/94‑1 (MQ=60)
                                                            ATCAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCAT                                  >  SRR4302540.6922026/1‑94 (MQ=60)
                                                              CAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTT                                <  SRR4302540.5430451/94‑1 (MQ=60)
                                                              CAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTT                                <  SRR4302540.7887932/94‑1 (MQ=60)
                                                              CAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTT                                <  SRR4302540.4685284/94‑1 (MQ=60)
                                                              CAGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTT                                <  SRR4302540.4685283/94‑1 (MQ=60)
                                                               AGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATTAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTC                               <  SRR4302540.6530516/94‑1 (MQ=60)
                                                               AGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTC                               >  SRR4302540.1524000/1‑94 (MQ=60)
                                                               AGAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTC                               >  SRR4302540.1523999/1‑94 (MQ=60)
                                                                GAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTCCTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCC                              <  SRR4302540.4115049/94‑1 (MQ=60)
                                                                GAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCC                              <  SRR4302540.8185235/94‑1 (MQ=60)
                                                                GAGCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCC                              <  SRR4302540.4115050/94‑1 (MQ=60)
                                                                  GCTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTT                            <  SRR4302540.8467439/94‑1 (MQ=60)
                                                                   CTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTC                           <  SRR4302540.2192897/94‑1 (MQ=60)
                                                                   CTGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTC                           >  SRR4302540.864835/1‑94 (MQ=60)
                                                                    TGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCCTTTCCTTCC                          >  SRR4302540.1597437/1‑94 (MQ=60)
                                                                    TGGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCC                          >  SRR4302540.1429250/1‑94 (MQ=60)
                                                                     GGTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCC                         >  SRR4302540.4854376/1‑94 (MQ=60)
                                                                      GTTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCA                        <  SRR4302540.4624371/94‑1 (MQ=60)
                                                                       TTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAG                       >  SRR4302540.4595242/1‑94 (MQ=60)
                                                                       TTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAG                       >  SRR4302540.1810056/1‑94 (MQ=60)
                                                                       TTCACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAG                       <  SRR4302540.2074608/94‑1 (MQ=60)
                                                                         CACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCC                     >  SRR4302540.8132490/1‑94 (MQ=60)
                                                                          CCCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCT                    <  SRR4302540.3193935/94‑1 (MQ=60)
                                                                          ACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCT                    >  SRR4302540.6656848/1‑94 (MQ=60)
                                                                          ACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCT                    <  SRR4302540.5412380/94‑1 (MQ=60)
                                                                          ACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCT                    <  SRR4302540.201915/94‑1 (MQ=60)
                                                                          ACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCT                    >  SRR4302540.3076285/1‑94 (MQ=60)
                                                                          ACCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCT                    >  SRR4302540.6480254/1‑94 (MQ=60)
                                                                           CCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAACCTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTT                   <  SRR4302540.9403454/94‑1 (MQ=60)
                                                                           CCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTT                   >  SRR4302540.1071491/1‑94 (MQ=60)
                                                                           CCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTT                   >  SRR4302540.5803915/1‑94 (MQ=60)
                                                                           CCCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTT                   >  SRR4302540.1071492/1‑94 (MQ=60)
                                                                            CCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTC                  >  SRR4302540.2318879/1‑94 (MQ=60)
                                                                            CCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTC                  >  SRR4302540.3199891/1‑94 (MQ=60)
                                                                            CCCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTC                  <  SRR4302540.8486908/94‑1 (MQ=60)
                                                                             CCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCC                 <  SRR4302540.377752/94‑1 (MQ=60)
                                                                             CCATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCC                 <  SRR4302540.6828216/94‑1 (MQ=60)
                                                                              CATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCA                <  SRR4302540.1462086/94‑1 (MQ=60)
                                                                              CATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCA                <  SRR4302540.3863087/94‑1 (MQ=60)
                                                                              CATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCA                <  SRR4302540.279935/94‑1 (MQ=60)
                                                                              CATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTACA                >  SRR4302540.390091/1‑94 (MQ=60)
                                                                               ATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAG               >  SRR4302540.6741537/1‑94 (MQ=60)
                                                                               ATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAG               >  SRR4302540.1189175/1‑94 (MQ=60)
                                                                               ATCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAG               <  SRR4302540.1257370/94‑1 (MQ=60)
                                                                               ATCAAGAACATCCCCGTCCAGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAG               <  SRR4302540.9894094/94‑1 (MQ=60)
                                                                                TCAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGT              <  SRR4302540.9726680/94‑1 (MQ=60)
                                                                                 CAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTC             >  SRR4302540.6791743/1‑94 (MQ=60)
                                                                                 CAAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTC             >  SRR4302540.3290218/1‑94 (MQ=60)
                                                                                  AAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCG            >  SRR4302540.2610450/1‑94 (MQ=60)
                                                                                  AAGAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCG            >  SRR4302540.6304310/1‑94 (MQ=60)
                                                                                    GAACATCCCCGTCCTGATTCCTTAATGAAAACCTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTT          <  SRR4302540.1593706/94‑1 (MQ=60)
                                                                                    GAACATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTT          <  SRR4302540.5122358/94‑1 (MQ=60)
                                                                                       CATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGAT       <  SRR4302540.6333283/94‑1 (MQ=60)
                                                                                       CATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGAT       <  SRR4302540.5618112/94‑1 (MQ=60)
                                                                                        ATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGATGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGATA      >  SRR4302540.2266092/1‑94 (MQ=60)
                                                                                        ATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGATA      >  SRR4302540.2266093/1‑94 (MQ=60)
                                                                                        ATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGATA      >  SRR4302540.2266094/1‑94 (MQ=60)
                                                                                        ATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGATA      >  SRR4302540.718994/1‑94 (MQ=60)
                                                                                        ATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGATA      >  SRR4302540.1643206/1‑94 (MQ=60)
                                                                                        ATCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGATA      >  SRR4302540.2100487/1‑94 (MQ=60)
                                                                                         TCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGATAA     <  SRR4302540.4582629/94‑1 (MQ=60)
                                                                                         TCCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGATAA     <  SRR4302540.1542677/94‑1 (MQ=60)
                                                                                          CCCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGATAAA    >  SRR4302540.9400657/1‑94 (MQ=60)
                                                                                          CCCCGTCCTGATCCCTTAATGAAAATCTTCTCTTCTTCCACCGCTACCTGCGCGACGCCGCCATTTCCTGCCCAGCCTTCCAGTCGTTGATAAA    <  SRR4302540.8905872/94‑1 (MQ=60)
                                                                                           CCCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGATAAAC   <  SRR4302540.8384845/94‑1 (MQ=60)
                                                                                            CCGTCCTGATTCCTTAATGAAAAACTGCTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGATAAACG  <  SRR4302540.7033422/94‑1 (MQ=60)
                                                                                            CCGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGATAAACG  >  SRR4302540.6223206/1‑94 (MQ=60)
                                                                                             |                                                                                            
ATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCTGTCCTGATTCCTTAATGAAAAACTACTCTTCTTCCACCGCTAACTGCGCGAAGCCGCCATTTCCTTCCCAGCCTTCCAGTCGTTGATAAACG  >  NC_000913/2840480‑2840665

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑