Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,842,033 G→T R67R (CGC→CGA hycG ← hydrogenase activity

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,842,0330GT100.0% 1262.1 / NA 341R67R (CGC→CGAhycGhydrogenase activity
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (177/164);  total (177/164)

Only 100 of 344 total aligned reads displayed.

AGCGCAGGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAAGCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAGGC  >  NC_000913/2841944‑2842122
                                                                                         |                                                                                         
 gcgcagGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGtt                                                                                       <  1:2443948/93‑1 (MQ=255)
  cgcagGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTc                                                                                      <  2:380617/93‑1 (MQ=255)
  cgcagGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTc                                                                                      >  2:789396/1‑93 (MQ=255)
    cagGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTg                                                                                    <  2:3331715/93‑1 (MQ=255)
     agGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGc                                                                                   <  2:9365166/93‑1 (MQ=255)
     agGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGc                                                                                   >  2:3121630/1‑93 (MQ=255)
      ggggATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCa                                                                                  >  2:10031812/1‑93 (MQ=255)
      ggggATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCa                                                                                  <  1:5917311/93‑1 (MQ=255)
      ggggATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCa                                                                                  >  2:870571/1‑93 (MQ=255)
            cGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAAc                                                                            <  2:4358650/93‑1 (MQ=255)
             gCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACa                                                                           <  1:5585798/93‑1 (MQ=255)
              cATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAg                                                                          <  1:9269446/93‑1 (MQ=255)
               aTTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAgc                                                                         <  2:6257512/93‑1 (MQ=255)
                ttGCACGGGTGCCCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCCTCCAACAgcg                                                                        >  1:6820797/1‑93 (MQ=255)
                ttGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAgcg                                                                        >  1:3761080/1‑93 (MQ=255)
                   cACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAgcggcg                                                                     <  2:1694160/93‑1 (MQ=255)
                    aCGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGa                                                                    >  2:1359827/1‑93 (MQ=255)
                      gggTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGaaa                                                                  >  1:8081481/1‑93 (MQ=255)
                      gggTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGaaa                                                                  >  1:7169704/1‑93 (MQ=255)
                       ggTGGCCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAg                                                                 <  1:2878800/93‑1 (MQ=255)
                       ggTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAg                                                                 >  2:8613019/1‑93 (MQ=255)
                       ggTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAg                                                                 <  1:1962001/93‑1 (MQ=255)
                       gatGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAg                                                                 <  2:8834277/91‑1 (MQ=255)
                        gTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGc                                                                <  2:8517594/93‑1 (MQ=255)
                        gTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGc                                                                >  1:9451370/1‑93 (MQ=255)
                         tGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCg                                                               >  1:1634558/1‑93 (MQ=255)
                         tGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCg                                                               >  2:2852737/1‑93 (MQ=255)
                          gACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGt                                                              >  1:4348220/1‑93 (MQ=255)
                              gcgcCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTcgcg                                                          >  2:5062862/1‑93 (MQ=255)
                               cgcCGGTAAACAGTAAAATATCCGCATGACGCGTTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGa                                                         <  1:5770703/93‑1 (MQ=255)
                                  cGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGaaaa                                                      >  1:4220177/1‑93 (MQ=255)
                                  cGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTCCTGCATCAAACAGCGGCGAAAGCGTGGCGaaaa                                                      <  1:6639545/93‑1 (MQ=255)
                                   ggTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAat                                                     >  1:7826203/1‑93 (MQ=255)
                                   ggTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAat                                                     >  1:7983747/1‑93 (MQ=255)
                                   ggTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAat                                                     >  1:6361175/1‑93 (MQ=255)
                                   ggTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAat                                                     >  2:1970026/1‑93 (MQ=255)
                                   ggTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAat                                                     >  1:1242169/1‑93 (MQ=255)
                                      aaaCAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAatttc                                                  >  1:9529158/1‑93 (MQ=255)
                                      aaaCAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAatttc                                                  <  1:1899011/93‑1 (MQ=255)
                                        aaaGTAAAATATCCGCATGACGCTGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAatttcga                                                <  2:2568792/91‑1 (MQ=255)
                                        aCAGTAAAATATCCGCATGACGTGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAatttcga                                                <  1:8593830/93‑1 (MQ=255)
                                        aCAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAatttcga                                                >  1:5122188/1‑93 (MQ=255)
                                         cAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGATAatttcgat                                               >  2:3607788/1‑93 (MQ=255)
                                         cAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAatttcgat                                               <  2:1574093/93‑1 (MQ=255)
                                          aGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAatttcgatt                                              >  1:7326590/1‑93 (MQ=255)
                                           gTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGGACatttcgattt                                             >  2:6380050/1‑93 (MQ=255)
                                           gTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAatttcgattt                                             >  2:4762724/1‑93 (MQ=255)
                                            tAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAatttcgatttc                                            >  2:5636755/1‑93 (MQ=255)
                                            tAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAatttcgatttc                                            <  1:7042996/93‑1 (MQ=255)
                                            tAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAatttcgatttc                                            >  1:8773895/1‑93 (MQ=255)
                                            tAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAatttcgatttc                                            >  1:3329504/1‑93 (MQ=255)
                                            tAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAatttcgatttc                                            >  1:8895380/1‑93 (MQ=255)
                                            tAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAatttcgatttc                                            >  2:7413243/1‑93 (MQ=255)
                                             aaaaTATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAatttcgatttcg                                           <  2:5333226/93‑1 (MQ=255)
                                             aaaaTATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAatttcgatttcg                                           <  1:3634012/93‑1 (MQ=255)
                                                 tatCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAAc                                       <  1:1706810/93‑1 (MQ=255)
                                                   tCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCg                                     >  2:6968475/1‑93 (MQ=255)
                                                   tCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACACCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCg                                     >  2:9005619/1‑93 (MQ=255)
                                                     cGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGtt                                   <  1:2639638/93‑1 (MQ=255)
                                                      gCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTg                                  <  2:247069/93‑1 (MQ=255)
                                                      gCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTg                                  <  2:6766093/93‑1 (MQ=255)
                                                         tGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAGGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAg                               >  2:7667185/1‑93 (MQ=255)
                                                         tGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCac                               >  1:6939316/1‑92 (MQ=255)
                                                         tGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAg                               <  1:2307040/93‑1 (MQ=255)
                                                         tGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAg                               >  1:2196108/1‑93 (MQ=255)
                                                          gACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAgc                              >  1:5447559/1‑93 (MQ=255)
                                                          gACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAgc                              <  1:1788822/93‑1 (MQ=255)
                                                             gcgGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAgccgc                           <  1:3970698/93‑1 (MQ=255)
                                                             gcgGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGGTGCAgccgc                           <  1:1101512/93‑1 (MQ=255)
                                                              cgGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAgccgcc                          >  1:6905275/1‑93 (MQ=255)
                                                                gTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCcgccgc                        >  2:2706671/1‑93 (MQ=255)
                                                                 tGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCa                       <  1:6110112/93‑1 (MQ=255)
                                                                 tGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCa                       >  1:10015142/1‑93 (MQ=255)
                                                                 tGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCa                       >  2:4568426/1‑93 (MQ=255)
                                                                  gAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAg                      >  2:5956415/1‑93 (MQ=255)
                                                                  gAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAg                      >  1:6536190/1‑93 (MQ=255)
                                                                  gAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAg                      <  1:1477157/93‑1 (MQ=255)
                                                                     ggAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTcc                   >  2:8053468/1‑93 (MQ=255)
                                                                     ggAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTcc                   >  2:9736074/1‑93 (MQ=255)
                                                                      gAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCa                  <  1:9143837/93‑1 (MQ=255)
                                                                      gAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCa                  <  1:4400158/93‑1 (MQ=255)
                                                                         cGATTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCAcgc               <  1:959813/93‑1 (MQ=255)
                                                                         cGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCAcgc               <  1:8363553/93‑1 (MQ=255)
                                                                         cGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCAcgc               <  2:2201483/93‑1 (MQ=255)
                                                                          gACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCAcgcg              <  1:2063512/93‑1 (MQ=255)
                                                                            cTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGt            >  1:489288/1‑93 (MQ=255)
                                                                             tttAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTa           <  2:6473808/93‑1 (MQ=255)
                                                                             tttAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAACCGTGGCGAAAATTTCGATTTCGACACCGTTCCAGCGGCGGCATTCCACGCGGtc           >  2:9499644/1‑92 (MQ=255)
                                                                              ttAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTaa          >  2:4412799/1‑93 (MQ=255)
                                                                               tAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTaaa         >  1:4737589/1‑93 (MQ=255)
                                                                                 aTGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTATACa       >  2:7474821/1‑93 (MQ=255)
                                                                                  tGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACAt      >  1:7401131/1‑93 (MQ=255)
                                                                                  tGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACAt      <  2:9875939/93‑1 (MQ=255)
                                                                                   gCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATa     <  2:7128302/93‑1 (MQ=255)
                                                                                   gCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATa     >  1:3007401/1‑93 (MQ=255)
                                                                                    ccGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAg    <  2:8229864/93‑1 (MQ=255)
                                                                                    ccGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAg    <  2:369401/93‑1 (MQ=255)
                                                                                    ccGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAg    <  2:4025994/93‑1 (MQ=255)
                                                                                      gAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAGGc  >  2:2155755/1‑93 (MQ=255)
                                                                                      gAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAGGc  <  2:3398276/93‑1 (MQ=255)
                                                                                         |                                                                                         
AGCGCAGGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAAGCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAGGC  >  NC_000913/2841944‑2842122

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ACGCAGCGCAGGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAAGCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAGGCAGAA  >  NC_000913/2841940‑2842126
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ACGTAGCGCAGGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAAT                                                                                               <  SRR4302540.3786158/94‑1 (MQ=60)
ACGCAGCGCAGGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAAT                                                                                               <  SRR4302540.6739338/94‑1 (MQ=60)
    AGCGCAGGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTT                                                                                           <  SRR4302540.2388577/94‑1 (MQ=60)
    AGCGCAGGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTT                                                                                           <  SRR4302540.877977/94‑1 (MQ=60)
     GCGCAGGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTC                                                                                          <  SRR4302540.2470270/94‑1 (MQ=60)
      CGCAGGGGATCTCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCT                                                                                         <  SRR4302540.4657356/94‑1 (MQ=60)
      CGCAGGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCT                                                                                         <  SRR4302540.3006801/94‑1 (MQ=60)
      CGCAGGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCT                                                                                         >  SRR4302540.8977444/1‑94 (MQ=60)
        CAGGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGC                                                                                       >  SRR4302540.5313291/1‑94 (MQ=60)
         AGGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCA                                                                                      >  SRR4302540.7272800/1‑94 (MQ=60)
         AGGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCA                                                                                      <  SRR4302540.6458799/94‑1 (MQ=60)
          GGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCAT                                                                                     <  SRR4302540.5982678/94‑1 (MQ=60)
           GGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATC                                                                                    <  SRR4302540.5874696/94‑1 (MQ=60)
           GGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATC                                                                                    >  SRR4302540.1743280/1‑94 (MQ=60)
           GGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATC                                                                                    <  SRR4302540.8264575/94‑1 (MQ=60)
            GGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCA                                                                                   <  SRR4302540.630998/94‑1 (MQ=60)
             GATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAA                                                                                  >  SRR4302540.4843591/1‑94 (MQ=60)
             GATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAA                                                                                  >  SRR4302540.964168/1‑94 (MQ=60)
              ATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAA                                                                                 >  SRR4302540.7059958/1‑94 (MQ=60)
              ATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAA                                                                                 <  SRR4302540.1724441/94‑1 (MQ=60)
               TCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAAC                                                                                <  SRR4302540.716420/94‑1 (MQ=60)
               TCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAAC                                                                                >  SRR4302540.9934900/1‑94 (MQ=60)
                CGCAGTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACA                                                                               <  SRR4302540.7378312/94‑1 (MQ=60)
                 GCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAG                                                                              <  SRR4302540.5647273/94‑1 (MQ=60)
                 GCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAG                                                                              >  SRR4302540.3229451/1‑94 (MQ=60)
                  CATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGC                                                                             >  SRR4302540.10045069/1‑94 (MQ=60)
                  CATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGC                                                                             >  SRR4302540.5112036/1‑94 (MQ=60)
                  CATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGC                                                                             <  SRR4302540.9380295/94‑1 (MQ=60)
                   ATTGCACGGGTGCCCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCCTCCAACAGCG                                                                            >  SRR4302540.6896304/1‑94 (MQ=60)
                   ATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCACACAGCG                                                                            >  SRR4302540.6896305/1‑94 (MQ=60)
                   ATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCG                                                                            >  SRR4302540.3802115/1‑94 (MQ=60)
                     TGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGC                                                                          >  SRR4302540.5641290/1‑94 (MQ=60)
                         CGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGACA                                                                      >  SRR4302540.351778/1‑94 (MQ=60)
                         CGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAA                                                                      >  SRR4302540.8175280/1‑94 (MQ=60)
                         CGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAA                                                                      >  SRR4302540.7249624/1‑94 (MQ=60)
                         CGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAA                                                                      <  SRR4302540.7759356/94‑1 (MQ=60)
                         CGGGTGACCGCGCCGGGAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAA                                                                      <  SRR4302540.7466585/94‑1 (MQ=60)
                          GGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAG                                                                     <  SRR4302540.7135972/94‑1 (MQ=60)
                          GGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAG                                                                     >  SRR4302540.2987154/1‑94 (MQ=60)
                          GGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGCCGAAAG                                                                     >  SRR4302540.8526543/1‑94 (MQ=60)
                           GGTGGCCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGC                                                                    <  SRR4302540.2910109/94‑1 (MQ=60)
                           GGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGC                                                                    <  SRR4302540.8867876/94‑1 (MQ=60)
                           GGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGC                                                                    >  SRR4302540.9563556/1‑94 (MQ=60)
                           GGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGC                                                                    <  SRR4302540.1983317/94‑1 (MQ=60)
                           GGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAAC                                                                    >  SRR4302540.7454734/1‑94 (MQ=60)
                           GGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCATTCTGCATCAAACAGCGGCGAAAGC                                                                    <  SRR4302540.4128902/94‑1 (MQ=60)
                            GTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCG                                                                   >  SRR4302540.9244238/1‑94 (MQ=60)
                            GTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCG                                                                   <  SRR4302540.5712410/94‑1 (MQ=60)
                            GTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCG                                                                   >  SRR4302540.1652438/1‑94 (MQ=60)
                            GTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCG                                                                   >  SRR4302540.440893/1‑94 (MQ=60)
                            GTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCG                                                                   <  SRR4302540.9626120/94‑1 (MQ=60)
                            GTGACCGCACCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCG                                                                   <  SRR4302540.392501/94‑1 (MQ=60)
                             TGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGT                                                                  >  SRR4302540.4395525/1‑94 (MQ=60)
                             TGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGT                                                                  <  SRR4302540.5102260/94‑1 (MQ=60)
                              GACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTG                                                                 <  SRR4302540.6967124/94‑1 (MQ=60)
                              GACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTG                                                                 <  SRR4302540.768684/94‑1 (MQ=60)
                               ACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCTTGG                                                                >  SRR4302540.8134644/1‑94 (MQ=60)
                               ACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGG                                                                <  SRR4302540.8729126/94‑1 (MQ=60)
                                CCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGC                                                               >  SRR4302540.1578454/1‑94 (MQ=60)
                                 CGCGCTGATAAAGAGTAAAATATCCGCATGACGGGGTTAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCG                                                              <  SRR4302540.5670307/94‑1 (MQ=60)
                                  GCGCCGGTAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAA                                                            <  SRR4302540.1781030/94‑1 (MQ=60)
                                   CGCCGGTAAACAGTAAAATATCCGCATGACGCGTTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAA                                                            <  SRR4302540.5834438/94‑1 (MQ=60)
                                    GCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAA                                                           >  SRR4302540.3101626/1‑94 (MQ=60)
                                     CCGGTAACCAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAA                                                          <  SRR4302540.2724258/94‑1 (MQ=60)
                                     CCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAA                                                          >  SRR4302540.9265413/1‑94 (MQ=60)
                                     CCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAA                                                          >  SRR4302540.4266124/1‑94 (MQ=60)
                                      CGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAAT                                                         >  SRR4302540.6432015/1‑94 (MQ=60)
                                      CGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAAT                                                         >  SRR4302540.1254842/1‑94 (MQ=60)
                                      CGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAAT                                                         >  SRR4302540.7917665/1‑94 (MQ=60)
                                      CGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAAT                                                         >  SRR4302540.8076727/1‑94 (MQ=60)
                                      CGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTCCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAAT                                                         <  SRR4302540.6713017/94‑1 (MQ=60)
                                       GGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATT                                                        >  SRR4302540.5191258/1‑94 (MQ=60)
                                       GGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATT                                                        <  SRR4302540.9621541/94‑1 (MQ=60)
                                       GGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATT                                                        >  SRR4302540.3929939/1‑94 (MQ=60)
                                        GTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTT                                                       >  SRR4302540.2707165/1‑94 (MQ=60)
                                         TAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTC                                                      >  SRR4302540.9641979/1‑94 (MQ=60)
                                         TAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTC                                                      <  SRR4302540.4152208/94‑1 (MQ=60)
                                         TAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTC                                                      >  SRR4302540.4792893/1‑94 (MQ=60)
                                          AAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCG                                                     <  SRR4302540.1919788/94‑1 (MQ=60)
                                          AAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCG                                                     >  SRR4302540.840461/1‑94 (MQ=60)
                                          AAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCG                                                     >  SRR4302540.840457/1‑94 (MQ=60)
                                           AACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGA                                                    >  SRR4302540.5177647/1‑94 (MQ=60)
                                           AACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGA                                                    >  SRR4302540.566455/1‑94 (MQ=60)
                                            ACAGTAAAATATCCGCATGACGTGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGAT                                                   <  SRR4302540.8693728/94‑1 (MQ=60)
                                             CAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATT                                                  >  SRR4302540.7408397/1‑94 (MQ=60)
                                              AGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTT                                                 >  SRR4302540.2312611/1‑94 (MQ=60)
                                              AGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTT                                                 >  SRR4302540.9336943/1‑94 (MQ=60)
                                               GTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTC                                                >  SRR4302540.8998344/1‑94 (MQ=60)
                                               GTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTC                                                >  SRR4302540.2769369/1‑94 (MQ=60)
                                               GTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTC                                                >  SRR4302540.3366054/1‑94 (MQ=60)
                                               GTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTC                                                >  SRR4302540.8875541/1‑94 (MQ=60)
                                                TAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCG                                               <  SRR4302540.8096189/94‑1 (MQ=60)
                                                TAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCG                                               <  SRR4302540.7121304/94‑1 (MQ=60)
                                                TAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCG                                               >  SRR4302540.2465355/1‑94 (MQ=60)
                                                 AAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGC                                              <  SRR4302540.2209091/94‑1 (MQ=60)
                                                 AAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGC                                              <  SRR4302540.3673795/94‑1 (MQ=60)
                                                  AAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCA                                             >  SRR4302540.9556754/1‑94 (MQ=60)
                                                  AAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCA                                             <  SRR4302540.6494110/94‑1 (MQ=60)
                                                  AAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCA                                             <  SRR4302540.5554844/94‑1 (MQ=60)
                                                   AATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAA                                            >  SRR4302540.1904583/1‑94 (MQ=60)
                                                    ATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAAC                                           <  SRR4302540.8979149/94‑1 (MQ=60)
                                                    ATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAAC                                           >  SRR4302540.6812739/1‑94 (MQ=60)
                                                    ATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAAC                                           >  SRR4302540.1378341/1‑94 (MQ=60)
                                                    ATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAAC                                           >  SRR4302540.7081295/1‑94 (MQ=60)
                                                     TATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACC                                          <  SRR4302540.1725258/94‑1 (MQ=60)
                                                     TATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACC                                          <  SRR4302540.1991665/94‑1 (MQ=60)
                                                     TATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACC                                          <  SRR4302540.1725260/94‑1 (MQ=60)
                                                      ATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCG                                         >  SRR4302540.6987349/1‑94 (MQ=60)
                                                      ATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCG                                         <  SRR4302540.6413731/94‑1 (MQ=60)
                                                       TCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGT                                        >  SRR4302540.2245863/1‑94 (MQ=60)
                                                        CCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTT                                       >  SRR4302540.1187217/1‑94 (MQ=60)
                                                        CCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTT                                       <  SRR4302540.8520484/94‑1 (MQ=60)
                                                        CCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTT                                       >  SRR4302540.798606/1‑94 (MQ=60)
                                                         CGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTG                                      >  SRR4302540.2661476/1‑94 (MQ=60)
                                                         CGCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTG                                      <  SRR4302540.2668239/94‑1 (MQ=60)
                                                          GCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGC                                     >  SRR4302540.1532510/1‑94 (MQ=60)
                                                          GCATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGC                                     <  SRR4302540.6491820/94‑1 (MQ=60)
                                                           CATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCA                                    >  SRR4302540.2505806/1‑94 (MQ=60)
                                                           CATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCA                                    <  SRR4302540.3257262/94‑1 (MQ=60)
                                                           CATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAAACGTTGCA                                    >  SRR4302540.9441757/1‑94 (MQ=60)
                                                            ATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAG                                   >  SRR4302540.7969454/1‑94 (MQ=60)
                                                            ATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAG                                   >  SRR4302540.2219826/1‑94 (MQ=60)
                                                            ATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAG                                   >  SRR4302540.2219827/1‑94 (MQ=60)
                                                            ATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAG                                   >  SRR4302540.7016556/1‑94 (MQ=60)
                                                            ATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAG                                   >  SRR4302540.4439091/1‑94 (MQ=60)
                                                            ATGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAC                                   >  SRR4302540.7016555/1‑94 (MQ=60)
                                                             TGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGC                                  <  SRR4302540.5053334/94‑1 (MQ=60)
                                                             TGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGC                                  >  SRR4302540.5507502/1‑94 (MQ=60)
                                                             TGACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGC                                  <  SRR4302540.2331870/94‑1 (MQ=60)
                                                              GACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCC                                 <  SRR4302540.1808267/94‑1 (MQ=60)
                                                               ACGCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCG                                <  SRR4302540.6688107/94‑1 (MQ=60)
                                                                 GCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGGAACCGTTGCAGCCGCC                              <  SRR4302540.6018061/94‑1 (MQ=60)
                                                                 GCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCC                              <  SRR4302540.4013502/94‑1 (MQ=60)
                                                                 GCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCC                              <  SRR4302540.1112860/94‑1 (MQ=60)
                                                                 GCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCC                              >  SRR4302540.9394289/1‑94 (MQ=60)
                                                                 GCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCC                              <  SRR4302540.3922696/94‑1 (MQ=60)
                                                                 GCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCC                              >  SRR4302540.6982051/1‑94 (MQ=60)
                                                                 GCGGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGGTGCAGCCGCC                              <  SRR4302540.1112861/94‑1 (MQ=60)
                                                                   GGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGC                            >  SRR4302540.3734293/1‑94 (MQ=60)
                                                                   GGTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGC                            >  SRR4302540.2157520/1‑94 (MQ=60)
                                                                   GGTGAAGGAACGACTTTAATGCCGAATAGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGC                            >  SRR4302540.1943587/1‑94 (MQ=60)
                                                                    GTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCA                           >  SRR4302540.3406604/1‑94 (MQ=60)
                                                                    GTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCA                           >  SRR4302540.693255/1‑94 (MQ=60)
                                                                    GTGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCA                           >  SRR4302540.10131729/1‑94 (MQ=60)
                                                                     TGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAT                          >  SRR4302540.10013335/1‑94 (MQ=60)
                                                                     TGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAG                          >  SRR4302540.6608732/1‑94 (MQ=60)
                                                                     TGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAG                          <  SRR4302540.4343104/94‑1 (MQ=60)
                                                                     TGAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAG                          <  SRR4302540.6178153/94‑1 (MQ=60)
                                                                      GAAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGT                         <  SRR4302540.1493332/94‑1 (MQ=60)
                                                                       AAGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTC                        <  SRR4302540.6819335/94‑1 (MQ=60)
                                                                        AGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCC                       >  SRR4302540.6626241/1‑94 (MQ=60)
                                                                        AGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCC                       >  SRR4302540.3716967/1‑94 (MQ=60)
                                                                        AGGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCC                       >  SRR4302540.4691746/1‑94 (MQ=60)
                                                                         GGAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGAGGCGAAAGCGTCGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCC                      >  SRR4302540.4330556/1‑94 (MQ=60)
                                                                          GAACGACTTTAATGCGGAATCGTTCTGCATCAACCAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCAC                     <  SRR4302540.963455/94‑1 (MQ=60)
                                                                          GAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCAC                     <  SRR4302540.4447881/94‑1 (MQ=60)
                                                                          GAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCAC                     <  SRR4302540.5783507/94‑1 (MQ=60)
                                                                          GAACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCAC                     <  SRR4302540.9253677/94‑1 (MQ=60)
                                                                           AACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACG                    <  SRR4302540.4763094/94‑1 (MQ=60)
                                                                            ACGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGC                   >  SRR4302540.1011786/1‑94 (MQ=60)
                                                                             CGATTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCG                  <  SRR4302540.969748/94‑1 (MQ=60)
                                                                             CGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCG                  <  SRR4302540.8460609/94‑1 (MQ=60)
                                                                             CGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCG                  >  SRR4302540.1922007/1‑94 (MQ=60)
                                                                             CGACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCG                  <  SRR4302540.1842831/94‑1 (MQ=60)
                                                                              GACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGG                 <  SRR4302540.2085716/94‑1 (MQ=60)
                                                                              GACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGG                 >  SRR4302540.1420318/1‑94 (MQ=60)
                                                                              GACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGG                 <  SRR4302540.5844947/94‑1 (MQ=60)
                                                                               ACTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGT                >  SRR4302540.494526/1‑94 (MQ=60)
                                                                                CTTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAAGTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGGA               >  SRR4302540.230168/1‑94 (MQ=60)
                                                                                 TTTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGACGCAGTCCACGCGGTAA              <  SRR4302540.7254613/94‑1 (MQ=60)
                                                                                  TTAATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAA             >  SRR4302540.4788159/1‑94 (MQ=60)
                                                                                    AATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACA           <  SRR4302540.7000352/94‑1 (MQ=60)
                                                                                     GTGCCGAATCGTTCTGCATCAAACAGCGGCGAAGGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACAT          <  SRR4302540.9066576/94‑1 (MQ=60)
                                                                                     ATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACAT          <  SRR4302540.2061142/94‑1 (MQ=60)
                                                                                     ATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACAT          <  SRR4302540.751267/94‑1 (MQ=60)
                                                                                     ATGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACAT          >  SRR4302540.7483584/1‑94 (MQ=60)
                                                                                      TGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATA         >  SRR4302540.3040502/1‑94 (MQ=60)
                                                                                      TGCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGACGCAGTCCACGCGGTAAACATA         <  SRR4302540.1851923/94‑1 (MQ=60)
                                                                                       GCCGAATCGTTTTGCAGCAAACAGCGGCGAACGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCGCGCGGTAAACATAG        <  SRR4302540.2359282/94‑1 (MQ=60)
                                                                                       GCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAG        <  SRR4302540.902449/94‑1 (MQ=60)
                                                                                       GCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAG        <  SRR4302540.14173/94‑1 (MQ=60)
                                                                                       GCCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAG        >  SRR4302540.1217546/1‑94 (MQ=60)
                                                                                        CCGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAGG       <  SRR4302540.6160115/94‑1 (MQ=60)
                                                                                         CGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAGGC      <  SRR4302540.6006247/94‑1 (MQ=60)
                                                                                         CGAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAGGC      <  SRR4302540.1706367/94‑1 (MQ=60)
                                                                                          GAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAGGCA     <  SRR4302540.4342109/94‑1 (MQ=60)
                                                                                          GAATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAGGCA     >  SRR4302540.4955921/1‑94 (MQ=60)
                                                                                           AATCGTTCTGCATCAAACAGTGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAGGCAG    >  SRR4302540.8283986/1‑94 (MQ=60)
                                                                                           AATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAGGCAG    >  SRR4302540.10132353/1‑94 (MQ=60)
                                                                                           AATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAGGCAG    >  SRR4302540.6344874/1‑94 (MQ=60)
                                                                                           AATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAGGCAG    <  SRR4302540.2301079/94‑1 (MQ=60)
                                                                                           AATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAGGCAG    >  SRR4302540.8284264/1‑94 (MQ=60)
                                                                                            ATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAGGCAGA   <  SRR4302540.343838/94‑1 (MQ=60)
                                                                                            ATCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAGGCAGA   >  SRR4302540.2068877/1‑94 (MQ=60)
                                                                                             TCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAGGCAGAA  >  SRR4302540.149729/1‑94 (MQ=60)
                                                                                             |                                                                                             
ACGCAGCGCAGGGGATCGCATTGCACGGGTGACCGCGCCGGTAAACAGTAAAATATCCGCATGACGCGGTGAAGGAACGACTTTAATGCCGAAGCGTTCTGCATCAAACAGCGGCGAAAGCGTGGCGAAAATTTCGATTTCGCAACCGTTGCAGCCGCCGCAGTCCACGCGGTAAACATAGGCAGAA  >  NC_000913/2841940‑2842126

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: