Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,935,409 T→C intergenic (+28/‑51) fucI → / → fucK L‑fucose isomerase/L‑fuculokinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,935,4090TC100.0% 1072.7 / NA 332intergenic (+28/‑51)fucI/fucKL‑fucose isomerase/L‑fuculokinase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (173/159);  total (173/159)

Only 100 of 347 total aligned reads displayed.

ATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAA  >  NC_000913/2935319‑2935498
                                                                                          |                                                                                         
 tGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGc                                                                                        >  1:7642696/1‑93 (MQ=255)
   gATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTc                                                                                      >  2:270487/1‑93 (MQ=255)
   gATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTc                                                                                      >  2:1355228/1‑93 (MQ=255)
    atatTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTcc                                                                                     <  1:588375/93‑1 (MQ=255)
     tatTGAAGGCAAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCg                                                                                    >  2:1646356/1‑93 (MQ=255)
       ttGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGc                                                                                  <  2:9408977/93‑1 (MQ=255)
        tGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGGTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCt                                                                                 >  2:6196029/1‑93 (MQ=255)
          aaGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTAc                                                                               >  1:4234766/1‑93 (MQ=255)
          aaGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTAc                                                                               <  2:9965759/93‑1 (MQ=255)
           aGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTAcc                                                                              >  2:4844922/1‑93 (MQ=255)
               cAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGc                                                                          >  1:1662624/1‑93 (MQ=255)
               cAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGc                                                                          >  2:7922222/1‑93 (MQ=255)
               cAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGc                                                                          <  1:3662997/93‑1 (MQ=255)
                aGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGcc                                                                         <  2:4649076/93‑1 (MQ=255)
                aGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGcc                                                                         <  1:146042/93‑1 (MQ=255)
                aGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGcc                                                                         <  1:7996383/93‑1 (MQ=255)
                 ggATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCt                                                                        >  1:1925355/1‑93 (MQ=255)
                  gATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTACCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTg                                                                       <  2:5686388/93‑1 (MQ=255)
                  gATTACCGCCCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTg                                                                       >  2:6730385/1‑93 (MQ=255)
                   aTTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGa                                                                      >  2:5077755/1‑93 (MQ=255)
                    ttACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGaa                                                                     >  1:7014707/1‑93 (MQ=255)
                     tACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAc                                                                    <  1:8443554/93‑1 (MQ=255)
                            cTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAcaagcaag                                                             <  2:7280881/93‑1 (MQ=255)
                            cTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAcaagcaag                                                             <  1:1731235/93‑1 (MQ=255)
                            cTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGGGATGCCCGGCCGCTCCGGTTACCGGGCCTGAAcaagcaag                                                             >  2:5420646/1‑93 (MQ=255)
                             ttGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAaga                                                            <  1:1352145/93‑1 (MQ=255)
                                ccAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTg                                                         <  1:8111338/93‑1 (MQ=255)
                                ccAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTg                                                         >  2:2448091/1‑93 (MQ=255)
                                   gAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTgggt                                                      >  2:9144330/1‑91 (MQ=255)
                                   gAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGtt                                                      <  2:6483554/93‑1 (MQ=255)
                                    aaCTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTa                                                     >  1:4059388/1‑93 (MQ=255)
                                    aaCTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTa                                                     >  2:3181999/1‑93 (MQ=255)
                                     aCTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAg                                                    <  2:4029/93‑1 (MQ=255)
                                     aCTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAg                                                    >  1:6679257/1‑93 (MQ=255)
                                     aCTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAg                                                    >  1:4643466/1‑93 (MQ=255)
                                      cTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGc                                                   >  2:8287042/1‑93 (MQ=255)
                                        aCGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCg                                                 >  2:1763070/1‑93 (MQ=255)
                                        aCGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCg                                                 >  1:6004448/1‑93 (MQ=255)
                                         cGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCgg                                                <  2:8198756/93‑1 (MQ=255)
                                         cGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCgg                                                <  2:1308706/93‑1 (MQ=255)
                                          ggTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTCACCGGa                                               >  2:3855661/1‑93 (MQ=255)
                                          ggTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGa                                               <  1:2392537/93‑1 (MQ=255)
                                           gTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGAt                                              <  2:10006568/93‑1 (MQ=255)
                                           gTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGAt                                              >  2:8871909/1‑93 (MQ=255)
                                            tCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCTGATa                                             >  1:6721463/1‑93 (MQ=255)
                                            tCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATa                                             <  2:8490082/93‑1 (MQ=255)
                                             ccGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa                                            <  2:7770361/93‑1 (MQ=255)
                                              cGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAg                                           >  1:4738686/1‑93 (MQ=255)
                                              cGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGCGGTTAGCCGGGTaaa                                           >  2:2564395/1‑92 (MQ=255)
                                               gTTGTACAAGCGTTAATACATTACTCCCTGTTGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGc                                          <  2:9820600/93‑1 (MQ=255)
                                                ttGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCa                                         <  1:5519613/93‑1 (MQ=255)
                                                 tGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCaa                                        <  2:5558736/93‑1 (MQ=255)
                                                  gTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAAt                                       <  1:3454099/93‑1 (MQ=255)
                                                  gTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAAt                                       <  2:9496434/93‑1 (MQ=255)
                                                  gTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAAt                                       >  1:7390957/1‑93 (MQ=255)
                                                    aCAAGCTTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGt                                     <  1:6122948/93‑1 (MQ=255)
                                                     cAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGtt                                    <  2:1976361/93‑1 (MQ=255)
                                                     cAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGtt                                    >  1:1241987/1‑93 (MQ=255)
                                                      aaGCGTTAACACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTa                                   <  1:6946894/93‑1 (MQ=255)
                                                       aGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAt                                  <  2:8418362/93‑1 (MQ=255)
                                                         cGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATcc                                <  2:287267/93‑1 (MQ=255)
                                                          gTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg                               >  1:5762028/1‑93 (MQ=255)
                                                             aaTACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCt                            >  1:9739265/1‑93 (MQ=255)
                                                              aTACATTGCTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCta                           <  2:8035868/93‑1 (MQ=255)
                                                                  aTTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGGTAAGCAATGTTATCCGGCTATAtt                       >  2:4287117/1‑93 (MQ=255)
                                                                   ttACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTg                      >  1:2786597/1‑93 (MQ=255)
                                                                    tACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCCGGCCTGAACAAGCAAGAGTGGTTAGAGGGATAAGCAATGTTATCCGGCTATATTGc                     >  1:4293830/1‑93 (MQ=255)
                                                                     tcTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCa                    <  1:2512758/92‑1 (MQ=255)
                                                                     aCTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCa                    <  2:875109/93‑1 (MQ=255)
                                                                     aCTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCa                    <  2:1147624/93‑1 (MQ=255)
                                                                      cTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGTCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAg                   <  1:3128171/93‑1 (MQ=255)
                                                                      cTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAg                   <  1:9009027/93‑1 (MQ=255)
                                                                       tCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCaag                  >  1:4472228/1‑91 (MQ=255)
                                                                       tCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAgg                  <  2:7040136/93‑1 (MQ=255)
                                                                        cccTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGa                 >  2:421415/1‑93 (MQ=255)
                                                                        cccTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGa                 >  1:10002000/1‑93 (MQ=255)
                                                                        cccTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGa                 <  2:933856/93‑1 (MQ=255)
                                                                        cccTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGa                 <  1:5325588/93‑1 (MQ=255)
                                                                         ccTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAg                >  2:6437840/1‑93 (MQ=255)
                                                                          cTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGc               <  2:1472946/93‑1 (MQ=255)
                                                                          cTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGc               >  1:5239453/1‑93 (MQ=255)
                                                                           tgatgtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCg              >  1:765556/1‑93 (MQ=255)
                                                                            gatgtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGCGGGGTTAGGCGGATAAGCAATGTTATTCGGCTATACTTCAGGAGCgg             >  2:4523233/1‑92 (MQ=255)
                                                                             atgtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAt            >  2:5828889/1‑93 (MQ=255)
                                                                             atgtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAt            <  1:8712577/93‑1 (MQ=255)
                                                                              tgtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAtt           <  1:9246764/93‑1 (MQ=255)
                                                                               gtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTa          >  2:3415218/1‑93 (MQ=255)
                                                                                tgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTAt         <  1:8277844/93‑1 (MQ=255)
                                                                                 gatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATg        >  1:3528263/1‑93 (MQ=255)
                                                                                  atgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGa       <  2:5290628/93‑1 (MQ=255)
                                                                                   tgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGaa      <  1:2713353/93‑1 (MQ=255)
                                                                                    gCCCGGCCGCGCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGaaa     <  1:6275457/93‑1 (MQ=255)
                                                                                     cccGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAAc    <  2:2219775/93‑1 (MQ=255)
                                                                                     cccGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAAc    >  1:1067201/1‑93 (MQ=255)
                                                                                      ccGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACa   >  1:2267563/1‑93 (MQ=255)
                                                                                      ccGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACa   <  2:7474157/93‑1 (MQ=255)
                                                                                       cGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaa  >  2:6009011/1‑93 (MQ=255)
                                                                                       cGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaa  <  2:8970280/93‑1 (MQ=255)
                                                                                       cGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaa  >  2:9259319/1‑93 (MQ=255)
                                                                                       cGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaa  >  1:2937466/1‑93 (MQ=255)
                                                                                          |                                                                                         
ATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAA  >  NC_000913/2935319‑2935498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GGCATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGA  >  NC_000913/2935316‑2935500
                                                                                             |                                                                                           
GGCATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGC                                                                                             >  SRR4302540.9784634/1‑94 (MQ=60)
 GCATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCC                                                                                            <  SRR4302540.7394991/94‑1 (MQ=60)
  CATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCG                                                                                           >  SRR4302540.7436523/1‑94 (MQ=60)
  CATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCG                                                                                           >  SRR4302540.5348466/1‑94 (MQ=60)
   ATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTTCCTGATGTGATGCCCGGCCGC                                                                                          >  SRR4302540.1668155/1‑94 (MQ=60)
   ATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGC                                                                                          >  SRR4302540.7611828/1‑94 (MQ=60)
   ATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGC                                                                                          >  SRR4302540.2985937/1‑94 (MQ=60)
   ATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGC                                                                                          >  SRR4302540.7728710/1‑94 (MQ=60)
     GGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTC                                                                                        <  SRR4302540.5384871/94‑1 (MQ=60)
       ATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCG                                                                                      <  SRR4302540.594721/94‑1 (MQ=60)
        TATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGG                                                                                     >  SRR4302540.4052605/1‑94 (MQ=60)
          TTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCT                                                                                   <  SRR4302540.4780187/94‑1 (MQ=60)
            GAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTAC                                                                                 >  SRR4302540.4280846/1‑94 (MQ=60)
            GAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTAC                                                                                 >  SRR4302540.4215008/1‑94 (MQ=60)
              AGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCG                                                                               <  SRR4302540.5195110/94‑1 (MQ=60)
              AGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCG                                                                               <  SRR4302540.6182550/94‑1 (MQ=60)
                 CCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGC                                                                            >  SRR4302540.2003419/1‑94 (MQ=60)
                 CCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGC                                                                            >  SRR4302540.1680726/1‑94 (MQ=60)
                 CCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGC                                                                            >  SRR4302540.3585048/1‑94 (MQ=60)
                  CAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCC                                                                           <  SRR4302540.3703088/94‑1 (MQ=60)
                   AGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCT                                                                          <  SRR4302540.8089462/94‑1 (MQ=60)
                   AGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCT                                                                          <  SRR4302540.147556/94‑1 (MQ=60)
                   AGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCT                                                                          >  SRR4302540.1946345/1‑94 (MQ=60)
                     GATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGA                                                                        <  SRR4302540.10080616/94‑1 (MQ=60)
                      ATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAA                                                                       >  SRR4302540.614692/1‑94 (MQ=60)
                      ATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAA                                                                       >  SRR4302540.7092596/1‑94 (MQ=60)
                       TTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCTCTGATGTGATGTCCGGCCGCTCCGGCTACCGGGCCTGAAC                                                                      >  SRR4302540.9042674/1‑94 (MQ=60)
                       TTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAC                                                                      <  SRR4302540.3137294/94‑1 (MQ=60)
                       TTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAC                                                                      <  SRR4302540.7047015/94‑1 (MQ=60)
                       TTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAC                                                                      >  SRR4302540.9042853/1‑94 (MQ=60)
                        TACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACA                                                                     <  SRR4302540.8541570/94‑1 (MQ=60)
                         ACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAA                                                                    >  SRR4302540.8503958/1‑94 (MQ=60)
                          CCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAG                                                                   >  SRR4302540.8355306/1‑94 (MQ=60)
                          CCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAG                                                                   <  SRR4302540.4752244/94‑1 (MQ=60)
                           CGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGC                                                                  >  SRR4302540.4790673/1‑94 (MQ=60)
                             CGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAA                                                                >  SRR4302540.2575372/1‑94 (MQ=60)
                             CGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAA                                                                >  SRR4302540.3549523/1‑94 (MQ=60)
                             CGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAA                                                                <  SRR4302540.325184/94‑1 (MQ=60)
                             CGCTGCCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTCCCCCCCGAGGGGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAA                                                                <  SRR4302540.325183/94‑1 (MQ=60)
                               CTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGA                                                              <  SRR4302540.1749920/94‑1 (MQ=60)
                                TTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAG                                                             >  SRR4302540.5903616/1‑94 (MQ=60)
                                TTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAG                                                             <  SRR4302540.1366366/94‑1 (MQ=60)
                                TTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAG                                                             <  SRR4302540.9153424/94‑1 (MQ=60)
                                 TGCCAGAACTACGGTCCGTTGTGCAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGT                                                            <  SRR4302540.5333532/94‑1 (MQ=60)
                                  GCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTG                                                           <  SRR4302540.4338689/94‑1 (MQ=60)
                                   CCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGG                                                          <  SRR4302540.8205480/94‑1 (MQ=60)
                                   CCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGG                                                          <  SRR4302540.8130330/94‑1 (MQ=60)
                                    CAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGTCCTGAACAAGCAAGAGTGGT                                                         <  SRR4302540.243808/94‑1 (MQ=60)
                                    CAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGT                                                         <  SRR4302540.8723454/94‑1 (MQ=60)
                                     AGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTT                                                        >  SRR4302540.1317390/1‑94 (MQ=60)
                                     AGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTT                                                        >  SRR4302540.1317389/1‑94 (MQ=60)
                                      GAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTA                                                       >  SRR4302540.4103153/1‑94 (MQ=60)
                                       AACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAG                                                      >  SRR4302540.6753036/1‑94 (MQ=60)
                                       AACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAG                                                      <  SRR4302540.5572997/94‑1 (MQ=60)
                                       AACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAG                                                      >  SRR4302540.4693175/1‑94 (MQ=60)
                                       AACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAG                                                      >  SRR4302540.4693176/1‑94 (MQ=60)
                                       AACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAG                                                      <  SRR4302540.1067895/94‑1 (MQ=60)
                                       AACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAG                                                      <  SRR4302540.2369798/94‑1 (MQ=60)
                                          TACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCG                                                   >  SRR4302540.6071014/1‑94 (MQ=60)
                                             GGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGGCGGAA                                                >  SRR4302540.3526789/1‑94 (MQ=60)
                                             GGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGAT                                                <  SRR4302540.9679098/94‑1 (MQ=60)
                                             GGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGAT                                                <  SRR4302540.2418315/94‑1 (MQ=60)
                                              GTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCTGATA                                               >  SRR4302540.6795648/1‑94 (MQ=60)
                                              GTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATA                                               >  SRR4302540.1208716/1‑94 (MQ=60)
                                              GTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATA                                               <  SRR4302540.1754493/94‑1 (MQ=60)
                                              GTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATA                                               <  SRR4302540.8193562/94‑1 (MQ=60)
                                              GTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATA                                               >  SRR4302540.6795647/1‑94 (MQ=60)
                                               TCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAA                                              <  SRR4302540.638681/94‑1 (MQ=60)
                                               TCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAA                                              >  SRR4302540.4291245/1‑94 (MQ=60)
                                                CCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAG                                             <  SRR4302540.2915032/94‑1 (MQ=60)
                                                CCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAG                                             >  SRR4302540.4789263/1‑94 (MQ=60)
                                                CCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAG                                             >  SRR4302540.2819797/1‑94 (MQ=60)
                                                CCGTTGTACAAGCGTTAATACATTACTCCCTGATCTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAG                                             <  SRR4302540.6282711/94‑1 (MQ=60)
                                                 CGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGC                                            >  SRR4302540.7564226/1‑94 (MQ=60)
                                                  GTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCA                                           >  SRR4302540.5847426/1‑94 (MQ=60)
                                                  GTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCA                                           <  SRR4302540.2776815/94‑1 (MQ=60)
                                                  GTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCA                                           <  SRR4302540.2365724/94‑1 (MQ=60)
                                                   TTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAA                                          <  SRR4302540.5580402/94‑1 (MQ=60)
                                                   TTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAA                                          <  SRR4302540.1841321/94‑1 (MQ=60)
                                                    TGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAAT                                         <  SRR4302540.9935623/94‑1 (MQ=60)
                                                    TGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAAT                                         >  SRR4302540.7473310/1‑94 (MQ=60)
                                                     GTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATG                                        <  SRR4302540.3491685/94‑1 (MQ=60)
                                                      TACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGCGGTTAGCCGGATAAGCAATGT                                       >  SRR4302540.8790516/1‑94 (MQ=60)
                                                      TACAAGCGTTAATACAGTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGT                                       <  SRR4302540.3213191/94‑1 (MQ=60)
                                                       GCAAGCGATAATACATTACTCCCTGATGTTATGCCCGACCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTT                                      <  SRR4302540.6982340/94‑1 (MQ=60)
                                                       ACAAGCTTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTT                                      <  SRR4302540.6191139/94‑1 (MQ=60)
                                                       ACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTT                                      <  SRR4302540.9972451/94‑1 (MQ=60)
                                                       ACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTT                                      >  SRR4302540.1254658/1‑94 (MQ=60)
                                                       ACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTT                                      >  SRR4302540.2258644/1‑94 (MQ=60)
                                                        CAAGCGTTAATACATTCCTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTA                                     <  SRR4302540.840682/94‑1 (MQ=60)
                                                        CAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTA                                     <  SRR4302540.9228153/94‑1 (MQ=60)
                                                         AAGCTTTAACACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAT                                    <  SRR4302540.7024209/94‑1 (MQ=60)
                                                         AAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAT                                    >  SRR4302540.3455354/1‑94 (MQ=60)
                                                         AAGCGTTAACACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAT                                    <  SRR4302540.7024208/94‑1 (MQ=60)
                                                           GCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCC                                  >  SRR4302540.6759037/1‑94 (MQ=60)
                                                            CGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCACGAGTGATTAGCAGGATCAGCAATGATAACCG                                 >  SRR4302540.5825647/1‑94 (MQ=60)
                                                            CGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCG                                 <  SRR4302540.2654882/94‑1 (MQ=60)
                                                            CGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCG                                 <  SRR4302540.6411710/94‑1 (MQ=60)
                                                            CGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCG                                 >  SRR4302540.5825646/1‑94 (MQ=60)
                                                             GTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGG                                <  SRR4302540.6114022/94‑1 (MQ=60)
                                                             GTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGGGGTTAGCCGGATAAGCAATATTATACGG                                >  SRR4302540.4047751/1‑94 (MQ=60)
                                                               TAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCT                              >  SRR4302540.8712280/1‑94 (MQ=60)
                                                               TAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCT                              >  SRR4302540.7079974/1‑94 (MQ=60)
                                                               TAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCT                              >  SRR4302540.9853599/1‑94 (MQ=60)
                                                                AATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGGCGGATAAGCAATGTTATCCGGCTA                             >  SRR4302540.6443467/1‑94 (MQ=60)
                                                                 ATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTAT                            >  SRR4302540.3906855/1‑94 (MQ=60)
                                                                 ATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTAT                            >  SRR4302540.4341507/1‑94 (MQ=60)
                                                                  TACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATA                           <  SRR4302540.4327962/94‑1 (MQ=60)
                                                                  TACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATA                           >  SRR4302540.4055496/1‑94 (MQ=60)
                                                                  TACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATA                           <  SRR4302540.747418/94‑1 (MQ=60)
                                                                  TACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATA                           >  SRR4302540.1801320/1‑94 (MQ=60)
                                                                   ACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAT                          <  SRR4302540.1739993/94‑1 (MQ=60)
                                                                    CATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATT                         >  SRR4302540.7790736/1‑94 (MQ=60)
                                                                     ATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTT                        >  SRR4302540.7395935/1‑94 (MQ=60)
                                                                     ATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTG                        >  SRR4302540.5709453/1‑94 (MQ=60)
                                                                     ATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTG                        >  SRR4302540.2816693/1‑94 (MQ=60)
                                                                      TTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGC                       >  SRR4302540.6935184/1‑94 (MQ=60)
                                                                      TTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCCGGCCTGAACAAGCAAGAGTGGTTAGAGGGATAAGCAATGTTATCCGGCTATATTGC                       >  SRR4302540.4340543/1‑94 (MQ=60)
                                                                       TACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCA                      <  SRR4302540.7734060/94‑1 (MQ=60)
                                                                        tcttcgTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAG                     <  SRR4302540.2539904/88‑1 (MQ=60)
                                                                        TCTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAG                     <  SRR4302540.2539901/94‑1 (MQ=60)
                                                                        ACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAG                     <  SRR4302540.3696700/94‑1 (MQ=60)
                                                                         CTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGTCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGG                    <  SRR4302540.3162321/94‑1 (MQ=60)
                                                                         CTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGG                    <  SRR4302540.7999560/94‑1 (MQ=60)
                                                                         CTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGG                    <  SRR4302540.9117106/94‑1 (MQ=60)
                                                                         CTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGG                    <  SRR4302540.9475918/94‑1 (MQ=60)
                                                                         CTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGG                    >  SRR4302540.5760995/1‑94 (MQ=60)
                                                                         CTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAAG                    >  SRR4302540.4520733/1‑94 (MQ=60)
                                                                          TCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCACGAGTGGTTAGCCGGATAAGCCATGATATCCGGCTATTTTGCAGGC                   >  SRR4302540.10118516/1‑94 (MQ=60)
                                                                          TCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGA                   >  SRR4302540.2527515/1‑94 (MQ=60)
                                                                          TCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGA                   >  SRR4302540.10118515/1‑94 (MQ=60)
                                                                          TCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGA                   >  SRR4302540.5471406/1‑94 (MQ=60)
                                                                          TCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGA                   <  SRR4302540.5992767/94‑1 (MQ=60)
                                                                          CCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGA                   <  SRR4302540.1594531/94‑1 (MQ=60)
                                                                           CCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAG                  >  SRR4302540.9155192/1‑94 (MQ=60)
                                                                           CCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAG                  <  SRR4302540.5383919/94‑1 (MQ=60)
                                                                            CCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGC                 >  SRR4302540.5296609/1‑94 (MQ=60)
                                                                             CTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCG                >  SRR4302540.773705/1‑94 (MQ=60)
                                                                             CTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCG                >  SRR4302540.773709/1‑94 (MQ=60)
                                                                             CTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCG                >  SRR4302540.1396281/1‑94 (MQ=60)
                                                                              TGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGA               >  SRR4302540.595882/1‑94 (MQ=60)
                                                                              TGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGA               >  SRR4302540.1388259/1‑94 (MQ=60)
                                                                              TGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGA               >  SRR4302540.2915861/1‑94 (MQ=60)
                                                                              TGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAAAAGCACGAGTGGTTAGCCGGATAAGCAATCTTATCCCGCTATATTTCAGGAGCGT               >  SRR4302540.2915862/1‑94 (MQ=60)
                                                                               GATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAT              >  SRR4302540.6249537/1‑94 (MQ=60)
                                                                               GATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAT              <  SRR4302540.1363941/94‑1 (MQ=60)
                                                                               GATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAT              >  SRR4302540.4494644/1‑94 (MQ=60)
                                                                               GATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAT              <  SRR4302540.1105588/94‑1 (MQ=60)
                                                                                ATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGTAATGTTATCCGGCTTTTTTGCAAGAGCGATT             >  SRR4302540.7866525/1‑94 (MQ=60)
                                                                                ATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATT             <  SRR4302540.8813723/94‑1 (MQ=60)
                                                                                 TGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTT            >  SRR4302540.1547830/1‑94 (MQ=60)
                                                                                 TGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTA            <  SRR4302540.9357479/94‑1 (MQ=60)
                                                                                  GTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTAT           <  SRR4302540.2746639/94‑1 (MQ=60)
                                                                                   TGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATG          <  SRR4302540.8373995/94‑1 (MQ=60)
                                                                                   TGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATG          >  SRR4302540.3566745/1‑94 (MQ=60)
                                                                                    GATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGA         >  SRR4302540.4592319/1‑94 (MQ=60)
                                                                                    GATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGA         <  SRR4302540.2641125/94‑1 (MQ=60)
                                                                                     ATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATTCGGCTATATTGCAGGAGCGATTATGAA        >  SRR4302540.8351495/1‑94 (MQ=60)
                                                                                     ATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAA        <  SRR4302540.236793/94‑1 (MQ=60)
                                                                                      TGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAA       <  SRR4302540.2742612/94‑1 (MQ=60)
                                                                                       GCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAAC      >  SRR4302540.1078079/1‑94 (MQ=60)
                                                                                       GCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAAC      >  SRR4302540.5187491/1‑94 (MQ=60)
                                                                                       GCCCGGCCGCGCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAAC      <  SRR4302540.6345270/94‑1 (MQ=60)
                                                                                        CCCGGCCGCTCCGGCTACCGGTCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTTCAGGAGCGATTATGAAACA     <  SRR4302540.455863/94‑1 (MQ=60)
                                                                                        CCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACA     >  SRR4302540.8360508/1‑94 (MQ=60)
                                                                                        CCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACA     <  SRR4302540.1709301/94‑1 (MQ=60)
                                                                                        CCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACA     >  SRR4302540.2291891/1‑94 (MQ=60)
                                                                                         CCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAA    >  SRR4302540.2969707/1‑94 (MQ=60)
                                                                                         CCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAA    <  SRR4302540.4188138/94‑1 (MQ=60)
                                                                                          CGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCCATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAG   >  SRR4302540.1339135/1‑94 (MQ=60)
                                                                                           GGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTTCAGTAGCGATTATGAAACAAGA  >  SRR4302540.5321059/1‑94 (MQ=60)
                                                                                           GGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGA  >  SRR4302540.5271298/1‑94 (MQ=60)
                                                                                             |                                                                                           
GGCATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGA  >  NC_000913/2935316‑2935500

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑